Rv3596c - c.1227G>C


Drug resistance types
79 Sensitive 1 RR-TB 18 HR-TB 5 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 38 Other
lineage Counts
lineage Count
lineage2.2.1 11
lineage4.9 89
La1;lineage4.1.2 1
lineage3;lineage4.9 1
lineage1.1.1;lineage4 1
lineage5.1.4 1
lineage4.8;lineage4.9 2
lineage4.1.1.3;lineage4.9 1
lineage1;lineage4.9 1
lineage4.2.1 1
lineage4 8
lineage4.1.1.1 1
lineage4.1;lineage4.9 2
lineage4.3.3 3
2
lineage6.1.3 1
lineage3 2
lineage4.1.2 1
lineage4.1.2.1 3
lineage4.3.2.1 3
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.5 1
lineage4.2.1.1;lineage4.3.3 1
lineage2.2.1;lineage4 1
lineage1.1.2 1
lineage4.4.1.1 1
lineage4.1.1.3 1
spoligotype Counts
spoligotype Count
None 142
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR20970043 MDR-TB lineage2.2.1 None
ERR400336 Sensitive lineage4.9 None
ERR751326 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR5341453 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR363502 Other lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR21677886 Sensitive lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR363447 Other lineage4.9 None
ERR369157 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR9971112 Other lineage2.2.1 None
SRR5341396 Other lineage3;lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR349296 Sensitive lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
ERR4024991 Other lineage4.8;lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4796254 Sensitive lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
ERR4798823 HR-TB lineage4 None
SRR1158918 Sensitive lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
SRR6046611 Sensitive lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
SRR1175496 Sensitive lineage4.9 None
ERR1063896 Sensitive None
ERR3275450 Other lineage4 None
ERR369151 Other lineage4.9 None
ERR363498 Sensitive lineage4.9 None
SRR3675580 Sensitive lineage4.9 None
SRR1159378 Other lineage4.9 None
ERR363490 Sensitive lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
ERR349300 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR9787256 Other lineage6.1.3 None
ERR373945 Sensitive lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR4797184 Sensitive lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR400326 Other lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR2446382 Other lineage4 None
ERR363499 Sensitive lineage4.9 None
ERR4596902 MDR-TB lineage3 None
SRR1172885 HR-TB lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR6866639 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR373947 Other lineage4.9 None
ERR736834 Sensitive lineage4.9 None
SRR12708416 Sensitive None
ERR4797264 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR363456 Sensitive lineage4.9 None
SRR3675547 Sensitive lineage4.9 None
SRR6045503 Sensitive lineage4.9 None
ERR137286 Other lineage4.9 None
ERR363453 Sensitive lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR502511 Sensitive lineage4.9 None
SRR3675265 Other lineage4 None
SRR9970980 HR-TB lineage4.1.2 None
ERR4178309 Other lineage4.1.2.1 None
ERR363506 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
SRR3675514 Sensitive lineage4.9 None
SRR5341425 Other lineage4.9 None
ERR4798099 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR363445 Other lineage4.9 None
SRR6045050 Sensitive lineage4.3.2.1 None
ERR349266 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR12708419 Other lineage4.3.3 None
ERR369159 Sensitive lineage4.9 None
ERR4818536 Other lineage4.9 None
ERR2517475 Other lineage4 None
ERR4797313 Sensitive lineage2.2.1 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1175052 HR-TB lineage4.9 None
ERR323066 Sensitive lineage4.9 None
ERR2513724 Sensitive lineage4.3.2.1 None
ERR4811030 Sensitive lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
SRR12708414 HR-TB lineage2.2.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR400320 Sensitive lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR12708384 Sensitive lineage4.9 None
SRR5341296 Sensitive lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR5341310 Other lineage1.1.2 None
ERR702405 Sensitive lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR6865502 Sensitive lineage4 None
ERR4769474 HR-TB lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR4814396 Sensitive lineage4.1.1.3 None
ERR6865513 Other lineage4.1.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6046245 Other lineage4.9 None
SRR12708392 Other lineage2.2.1 None
ERR2514552 Sensitive lineage3 None
SRR6511621 Sensitive lineage4.9 None
SRR5341323 Sensitive lineage4.9 None