TB-Profiler result

Run: ERR4814396
Summary

Run ID: ERR4814396

Sample name:

Date: 01-04-2023 13:16:27

Number of reads: 4510221

Percentage reads mapped: 86.83

Strain: lineage4.1.1.3

Drug-resistance: Sensitive

Download CSV Download TXT Download PDF Download JSON
Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage4 Euro-American LAM;T;S;X;H None 1.0
lineage4.1 Euro-American T;X;H None 1.0
lineage4.1.1 Euro-American (X-type) X1;X2;X3 None 1.0
lineage4.1.1.3 Euro-American (X-type) X1;X3 RD193 1.0
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrA 6655 c.-647T>C upstream_gene_variant 0.1
gyrA 6673 c.-629A>C upstream_gene_variant 0.14
gyrA 6676 c.-626T>G upstream_gene_variant 0.13
gyrA 6703 c.-599G>C upstream_gene_variant 0.12
gyrA 6712 c.-590G>C upstream_gene_variant 0.1
gyrA 6739 c.-563C>T upstream_gene_variant 0.11
gyrA 7362 p.Glu21Gln missense_variant 1.0
gyrA 7559 c.258G>C synonymous_variant 0.11
gyrA 7565 c.264C>T synonymous_variant 0.12
gyrA 7574 c.273G>C synonymous_variant 0.12
gyrA 7585 p.Ser95Thr missense_variant 1.0
gyrA 8330 c.1029C>G synonymous_variant 0.11
gyrA 8339 c.1038A>G synonymous_variant 0.11
gyrA 8837 c.1536C>G synonymous_variant 0.14
gyrA 8846 c.1545C>T synonymous_variant 0.16
gyrA 8852 c.1551T>C synonymous_variant 0.16
gyrA 8858 c.1557T>C synonymous_variant 0.17
gyrA 8870 c.1569G>C synonymous_variant 0.16
gyrA 8873 c.1572A>G synonymous_variant 0.15
gyrA 8897 c.1596T>C synonymous_variant 0.22
gyrA 8903 c.1602T>C synonymous_variant 0.2
gyrA 8915 c.1614A>G synonymous_variant 0.19
gyrA 9304 p.Gly668Asp missense_variant 1.0
gyrA 9437 c.2136G>A synonymous_variant 1.0
rpoB 760079 c.273G>A synonymous_variant 0.13
rpoB 760091 c.285G>C synonymous_variant 0.12
rpoB 760101 c.295T>C synonymous_variant 0.12
rpoB 760111 p.Ser102Cys missense_variant 0.13
rpoB 760118 c.312T>G synonymous_variant 0.12
rpoB 760121 c.315T>C synonymous_variant 0.11
rpoB 760139 c.333A>G synonymous_variant 0.12
rpoB 760235 c.429T>C synonymous_variant 0.1
rpoB 760400 c.594G>C synonymous_variant 0.14
rpoB 760406 c.600G>C synonymous_variant 0.14
rpoB 760407 p.Ser201Gly missense_variant 0.15
rpoB 760415 c.609C>T synonymous_variant 0.2
rpoB 760418 c.612G>C synonymous_variant 0.2
rpoB 760430 c.624T>C synonymous_variant 0.23
rpoB 760460 c.654G>C synonymous_variant 0.2
rpoB 760475 c.669A>G synonymous_variant 0.21
rpoB 760481 c.675G>C synonymous_variant 0.22
rpoB 760484 c.678A>G synonymous_variant 0.21
rpoB 760502 c.696C>G synonymous_variant 0.15
rpoB 760541 c.735G>C synonymous_variant 0.13
rpoB 760571 c.765G>C synonymous_variant 0.12
rpoB 760588 p.Thr261Ile missense_variant 0.13
rpoB 760591 p.Val262Ala missense_variant 0.13
rpoB 760595 c.789C>T synonymous_variant 0.13
rpoB 760596 p.Thr264Pro missense_variant 0.13
rpoB 760608 c.802C>T synonymous_variant 0.15
rpoB 760611 c.805T>C synonymous_variant 0.14
rpoB 760634 c.828T>C synonymous_variant 0.18
rpoB 760646 c.840C>G synonymous_variant 0.17
rpoB 760655 c.849A>G synonymous_variant 0.17
rpoB 760661 c.855A>G synonymous_variant 0.15
rpoB 760668 p.Thr288Ala missense_variant 0.14
rpoB 760674 c.868T>C synonymous_variant 0.12
rpoB 760679 c.873A>G synonymous_variant 0.13
rpoB 760683 c.877T>C synonymous_variant 0.13
rpoB 760841 c.1035T>C synonymous_variant 0.13
rpoB 760858 p.Val351Ala missense_variant 0.13
rpoB 760862 c.1056G>C synonymous_variant 0.13
rpoB 760865 c.1059C>T synonymous_variant 0.12
rpoB 760886 p.Glu360Asp missense_variant 0.13
rpoB 760887 p.Thr361Val missense_variant 0.13
rpoB 760910 c.1104C>T synonymous_variant 0.12
rpoB 761054 c.1248G>C synonymous_variant 0.12
rpoB 761057 c.1251G>C synonymous_variant 0.12
rpoB 761060 c.1254C>G synonymous_variant 0.12
rpoB 761063 c.1257C>G synonymous_variant 0.12
rpoB 761084 c.1278C>A synonymous_variant 0.16
rpoB 761097 c.1291_1293delAGCinsTCG synonymous_variant 0.13
rpoB 761102 c.1296A>G synonymous_variant 0.14
rpoB 761132 c.1326G>C synonymous_variant 0.11
rpoB 761234 c.1428G>C synonymous_variant 0.11
rpoB 761249 c.1443A>G synonymous_variant 0.11
rpoB 761273 c.1467T>C synonymous_variant 0.12
rpoB 761564 c.1758G>C synonymous_variant 0.11
rpoB 761570 c.1764T>C synonymous_variant 0.11
rpoB 761573 c.1767C>G synonymous_variant 0.11
rpoB 761579 c.1773G>C synonymous_variant 0.13
rpoB 761612 c.1806G>T synonymous_variant 0.19
rpoB 761615 c.1809A>C synonymous_variant 0.2
rpoB 761636 c.1830G>T synonymous_variant 0.19
rpoB 761645 c.1839C>G synonymous_variant 0.15
rpoB 761657 c.1851C>T synonymous_variant 0.17
rpoB 761990 c.2184G>C synonymous_variant 0.12
rpoB 762008 c.2202C>T synonymous_variant 0.14
rpoB 762038 c.2232C>T synonymous_variant 0.12
rpoB 762047 c.2241G>A synonymous_variant 0.13
rpoB 762053 c.2247T>C synonymous_variant 0.13
rpoB 762056 c.2250G>A synonymous_variant 0.12
rpoB 762065 c.2259T>G synonymous_variant 0.12
rpoB 762158 c.2352G>C synonymous_variant 0.1
rpoB 762167 c.2361T>C synonymous_variant 0.1
rpoB 762176 c.2370T>C synonymous_variant 0.12
rpoB 762185 c.2379G>C synonymous_variant 0.13
rpoB 762194 c.2388G>C synonymous_variant 0.14
rpoB 762233 c.2427G>C synonymous_variant 0.14
rpoB 762236 c.2430G>C synonymous_variant 0.15
rpoB 762245 c.2439G>C synonymous_variant 0.16
rpoB 762275 c.2469C>T synonymous_variant 0.14
rpoB 762284 c.2478G>C synonymous_variant 0.14
rpoB 762293 c.2487T>C synonymous_variant 0.13
rpoB 762296 c.2490G>C synonymous_variant 0.11
rpoC 763031 c.-339T>G upstream_gene_variant 0.13
rpoC 763034 c.-336C>G upstream_gene_variant 0.12
rpoC 763040 c.-330C>G upstream_gene_variant 0.1
rpoC 763070 c.-300T>C upstream_gene_variant 0.11
rpoC 763082 c.-288C>T upstream_gene_variant 0.12
rpoC 763088 c.-282C>G upstream_gene_variant 0.11
rpoC 763546 c.177A>G synonymous_variant 0.13
rpoC 763570 c.201G>C synonymous_variant 0.18
rpoC 763594 c.225C>T synonymous_variant 0.23
rpoC 763633 c.264T>C synonymous_variant 0.2
rpoC 763657 c.288G>A synonymous_variant 0.16
rpoC 763660 c.291T>G synonymous_variant 0.15
rpoC 763666 c.297G>C synonymous_variant 0.16
rpoC 763669 c.300C>G synonymous_variant 0.19
rpoC 763675 c.306C>G synonymous_variant 0.19
rpoC 763696 c.327T>C synonymous_variant 0.12
rpoC 763702 c.333C>G synonymous_variant 0.11
rpoC 763708 c.339G>C synonymous_variant 0.11
rpoC 763711 c.342G>C synonymous_variant 0.11
rpoC 763714 c.345G>C synonymous_variant 0.11
rpoC 763717 c.348T>C synonymous_variant 0.11
rpoC 763723 c.354G>C synonymous_variant 0.11
rpoC 763732 c.363C>A synonymous_variant 0.14
rpoC 764407 p.Arg346Ser missense_variant 0.12
rpoC 764458 c.1089G>C synonymous_variant 0.1
rpoC 764461 c.1092A>G synonymous_variant 0.1
rpoC 764692 c.1323C>T synonymous_variant 0.14
rpoC 764713 c.1344G>T synonymous_variant 0.13
rpoC 764716 c.1347G>C synonymous_variant 0.13
rpoC 764746 c.1377G>T synonymous_variant 0.12
rpoC 764758 c.1389C>G synonymous_variant 0.11
rpoC 764791 c.1422C>G synonymous_variant 0.12
rpoC 764803 c.1434C>T synonymous_variant 0.13
rpoC 764809 c.1440C>T synonymous_variant 0.12
rpoC 764810 p.Pro481Ala missense_variant 0.12
rpoC 764815 c.1446A>G synonymous_variant 0.11
rpoC 764824 c.1455T>C synonymous_variant 0.14
rpoC 764827 c.1458G>C synonymous_variant 0.16
rpoC 764858 c.1489T>C synonymous_variant 0.17
rpoC 764869 c.1500C>T synonymous_variant 0.15
rpoC 764875 c.1506C>A synonymous_variant 0.14
rpoC 764887 c.1518G>C synonymous_variant 0.14
rpoC 764888 c.1519T>C synonymous_variant 0.14
rpoC 764911 c.1542A>G synonymous_variant 0.12
rpoC 764912 p.Met515Leu missense_variant 0.11
rpoC 765150 p.Gly594Glu missense_variant 1.0
rpoC 765403 c.2034G>C synonymous_variant 0.12
rpoC 765405 p.Leu679His missense_variant 0.12
rpoC 765409 c.2040T>G synonymous_variant 0.11
rpoC 765421 c.2052C>G synonymous_variant 0.16
rpoC 765875 p.Val836Ile missense_variant 0.12
rpoC 765886 c.2517C>T synonymous_variant 0.12
rpoC 765907 c.2538G>T synonymous_variant 0.12
rpoC 765910 c.2541G>C synonymous_variant 0.12
rpoC 766963 c.3594T>C synonymous_variant 0.1
rpoC 766996 c.3627C>T synonymous_variant 0.13
rpoC 767002 c.3633G>C synonymous_variant 0.15
rpoC 767008 c.3639G>A synonymous_variant 0.13
rpoC 767023 c.3654C>T synonymous_variant 0.16
rpoC 767044 c.3675G>C synonymous_variant 0.18
rpoC 767080 c.3711G>C synonymous_variant 0.14
rpoC 767098 c.3729T>C synonymous_variant 0.19
rpoC 767104 c.3735C>G synonymous_variant 0.17
rpoC 767107 c.3738C>T synonymous_variant 0.2
rpoC 767119 c.3750A>G synonymous_variant 0.16
rpoC 767125 c.3756G>C synonymous_variant 0.14
mmpL5 775639 p.Ile948Val missense_variant 1.0
rpsL 781395 c.-165T>C upstream_gene_variant 1.0
rpsL 781802 c.243G>C synonymous_variant 0.1
rpsL 781817 c.258G>T synonymous_variant 0.12
rpsL 781829 c.270G>C synonymous_variant 0.12
rpsL 781832 c.273T>C synonymous_variant 0.12
rpsL 781859 c.300T>C synonymous_variant 0.19
rpsL 781868 c.309T>C synonymous_variant 0.2
rpsL 781871 c.312G>C synonymous_variant 0.17
rpsL 781877 c.318T>A synonymous_variant 0.16
rpsL 781892 c.333A>G synonymous_variant 0.12
rpsL 781898 c.339A>T synonymous_variant 0.11
rpsL 781907 c.348T>C synonymous_variant 0.1
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1471922 n.78delT non_coding_transcript_exon_variant 0.13
rrs 1471925 n.80T>C non_coding_transcript_exon_variant 0.13
rrs 1471931 n.87delA non_coding_transcript_exon_variant 0.13
rrs 1471934 n.89A>G non_coding_transcript_exon_variant 0.13
rrs 1471985 n.140T>C non_coding_transcript_exon_variant 0.11
rrs 1471986 n.141C>T non_coding_transcript_exon_variant 0.11
rrs 1472530 n.685G>A non_coding_transcript_exon_variant 0.5
rrs 1472537 n.692C>T non_coding_transcript_exon_variant 0.5
rrs 1472544 n.699C>A non_coding_transcript_exon_variant 0.67
rrs 1472545 n.700A>T non_coding_transcript_exon_variant 0.67
rrs 1472566 n.721G>A non_coding_transcript_exon_variant 1.0
rrs 1472571 n.726G>C non_coding_transcript_exon_variant 1.0
rrs 1472579 n.734G>C non_coding_transcript_exon_variant 1.0
rrs 1472580 n.735C>T non_coding_transcript_exon_variant 1.0
rrs 1472581 n.736A>T non_coding_transcript_exon_variant 1.0
rrs 1472989 n.1144G>A non_coding_transcript_exon_variant 0.29
rrs 1472990 n.1145A>G non_coding_transcript_exon_variant 0.29
rrs 1473082 n.1237G>A non_coding_transcript_exon_variant 0.45
rrs 1473088 n.1243A>G non_coding_transcript_exon_variant 0.4
rrs 1473099 n.1254T>A non_coding_transcript_exon_variant 0.38
rrs 1473104 n.1259C>T non_coding_transcript_exon_variant 0.38
rrs 1473105 n.1260G>A non_coding_transcript_exon_variant 0.38
rrs 1473110 n.1265T>G non_coding_transcript_exon_variant 0.43
rrs 1473111 n.1266A>G non_coding_transcript_exon_variant 0.5
rrs 1473121 n.1276T>C non_coding_transcript_exon_variant 0.56
rrs 1473123 n.1278A>T non_coding_transcript_exon_variant 0.56
rrs 1473129 n.1284C>T non_coding_transcript_exon_variant 0.67
rrs 1473145 n.1300C>T non_coding_transcript_exon_variant 0.6
rrs 1473166 n.1321G>A non_coding_transcript_exon_variant 0.5
rrs 1473288 n.1443C>T non_coding_transcript_exon_variant 0.17
rrs 1473290 n.1445C>T non_coding_transcript_exon_variant 0.17
rrs 1473291 n.1446G>T non_coding_transcript_exon_variant 0.17
rrl 1473717 n.60G>A non_coding_transcript_exon_variant 0.22
rrl 1473731 n.74T>A non_coding_transcript_exon_variant 0.35
rrl 1473746 n.89T>C non_coding_transcript_exon_variant 0.35
rrl 1473756 n.99G>T non_coding_transcript_exon_variant 0.38
rrl 1473758 n.101G>T non_coding_transcript_exon_variant 0.38
rrl 1473767 n.110G>T non_coding_transcript_exon_variant 0.14
rrl 1473770 n.113T>C non_coding_transcript_exon_variant 0.38
rrl 1473806 n.149C>T non_coding_transcript_exon_variant 0.33
rrl 1473812 n.155G>A non_coding_transcript_exon_variant 0.3
rrl 1473814 n.157A>T non_coding_transcript_exon_variant 0.22
rrl 1473815 n.158T>G non_coding_transcript_exon_variant 0.22
rrl 1473829 n.172G>C non_coding_transcript_exon_variant 0.38
rrl 1473831 n.174G>T non_coding_transcript_exon_variant 0.29
rrl 1473832 n.175C>T non_coding_transcript_exon_variant 0.29
rrl 1473839 n.182G>A non_coding_transcript_exon_variant 0.43
rrl 1473898 n.241C>T non_coding_transcript_exon_variant 0.4
rrl 1473899 n.242A>G non_coding_transcript_exon_variant 0.4
rrl 1473916 n.259C>A non_coding_transcript_exon_variant 0.4
rrl 1474632 n.975G>T non_coding_transcript_exon_variant 0.67
rrl 1474717 n.1060A>G non_coding_transcript_exon_variant 0.5
rrl 1474722 n.1065T>C non_coding_transcript_exon_variant 0.6
rrl 1474743 n.1086T>G non_coding_transcript_exon_variant 0.83
rrl 1474760 n.1103A>G non_coding_transcript_exon_variant 1.0
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 1.0
rrl 1474803 n.1146G>A non_coding_transcript_exon_variant 1.0
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 1.0
rrl 1474830 n.1173A>G non_coding_transcript_exon_variant 1.0
rrl 1475475 n.1818C>T non_coding_transcript_exon_variant 1.0
rrl 1475479 n.1822C>T non_coding_transcript_exon_variant 1.0
rrl 1475480 n.1823A>T non_coding_transcript_exon_variant 1.0
rrl 1475505 n.1848G>A non_coding_transcript_exon_variant 1.0
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 0.67
rrl 1475531 n.1874C>T non_coding_transcript_exon_variant 0.67
rrl 1476160 n.2503T>C non_coding_transcript_exon_variant 0.33
rrl 1476214 n.2557G>T non_coding_transcript_exon_variant 0.25
rrl 1476215 n.2558C>T non_coding_transcript_exon_variant 0.25
rrl 1476221 n.2564T>C non_coding_transcript_exon_variant 0.17
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.17
rrl 1476297 n.2640C>T non_coding_transcript_exon_variant 0.33
rrl 1476299 n.2642C>T non_coding_transcript_exon_variant 0.33
rpsA 1833823 c.282G>A synonymous_variant 0.11
rpsA 1833838 c.297G>C synonymous_variant 0.11
rpsA 1833841 c.300C>G synonymous_variant 0.11
rpsA 1833847 c.306C>G synonymous_variant 0.13
rpsA 1833856 c.315A>G synonymous_variant 0.13
rpsA 1833862 c.321G>T synonymous_variant 0.13
rpsA 1833874 c.333T>G synonymous_variant 0.12
rpsA 1833886 c.345C>G synonymous_variant 0.13
rpsA 1833894 p.Ala118Glu missense_variant 0.13
rpsA 1833928 c.387G>C synonymous_variant 0.14
rpsA 1833949 c.408T>C synonymous_variant 0.14
rpsA 1834357 c.816T>C synonymous_variant 0.11
tlyA 1917972 c.33A>G synonymous_variant 1.0
katG 2155296 c.816C>T synonymous_variant 1.0
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0
kasA 2517941 c.-174C>G upstream_gene_variant 0.1
ald 3086788 c.-32T>C upstream_gene_variant 1.0
ald 3087225 p.Val136Leu missense_variant 1.0
fbiD 3339178 p.Ala21Thr missense_variant 1.0
fprA 3473996 c.-11_-10insA upstream_gene_variant 1.0
fprA 3474197 p.Ser64Thr missense_variant 1.0
fprA 3474504 c.498G>A synonymous_variant 1.0
rpoA 3877638 c.870T>C synonymous_variant 0.1
rpoA 3877905 c.603A>G synonymous_variant 0.14
rpoA 3877908 c.600T>C synonymous_variant 0.16
rpoA 3877920 c.588G>C synonymous_variant 0.15
rpoA 3877923 c.585C>T synonymous_variant 0.15
rpoA 3877929 p.Ile193Val missense_variant 0.12
rpoA 3878259 c.249G>C synonymous_variant 0.11
rpoA 3878271 c.237T>C synonymous_variant 0.12
rpoA 3878283 p.Glu75Asp missense_variant 0.12
rpoA 3878292 c.216T>C synonymous_variant 0.12
rpoA 3878298 c.210A>G synonymous_variant 0.11
clpC1 4038838 c.1867C>T synonymous_variant 0.13
clpC1 4038845 c.1858_1860delTCGinsAGC synonymous_variant 0.13
clpC1 4038860 c.1845G>C synonymous_variant 0.14
clpC1 4038878 c.1827A>G synonymous_variant 0.13
clpC1 4038974 c.1731T>C synonymous_variant 0.11
clpC1 4038989 c.1716T>C synonymous_variant 0.14
clpC1 4038997 c.1708T>C synonymous_variant 0.13
clpC1 4039022 c.1683A>G synonymous_variant 0.13
clpC1 4039046 c.1659C>G synonymous_variant 0.12
clpC1 4039106 c.1599G>C synonymous_variant 0.11
clpC1 4039121 c.1584T>C synonymous_variant 0.13
clpC1 4039142 c.1563A>G synonymous_variant 0.16
clpC1 4039145 c.1560G>C synonymous_variant 0.17
clpC1 4039169 p.Glu512Asp missense_variant 0.21
clpC1 4039172 c.1533A>G synonymous_variant 0.21
clpC1 4039178 c.1527G>C synonymous_variant 0.22
clpC1 4039183 c.1522T>C synonymous_variant 0.22
clpC1 4039190 c.1515C>T synonymous_variant 0.2
clpC1 4039196 c.1509G>A synonymous_variant 0.18
clpC1 4039199 p.Ala502Glu missense_variant 0.18
clpC1 4039208 c.1497C>G synonymous_variant 0.16
clpC1 4039220 c.1485G>C synonymous_variant 0.15
clpC1 4039454 c.1251A>G synonymous_variant 0.12
clpC1 4039466 c.1239T>C synonymous_variant 0.13
clpC1 4039469 c.1236T>C synonymous_variant 0.13
clpC1 4039472 c.1233G>C synonymous_variant 0.13
clpC1 4039478 c.1227G>C synonymous_variant 0.13
clpC1 4039481 c.1224T>C synonymous_variant 0.14
clpC1 4039487 c.1218G>C synonymous_variant 0.17
clpC1 4039522 c.1183C>T synonymous_variant 0.19
clpC1 4039528 c.1177C>A synonymous_variant 0.2
clpC1 4039541 c.1164C>G synonymous_variant 0.15
clpC1 4039544 c.1161C>T synonymous_variant 0.12
clpC1 4039622 c.1083C>T synonymous_variant 0.12
clpC1 4039649 c.1056G>C synonymous_variant 0.15
clpC1 4039661 c.1044T>C synonymous_variant 0.17
clpC1 4039682 c.1023C>G synonymous_variant 0.16
clpC1 4039694 c.1011G>C synonymous_variant 0.16
clpC1 4039724 c.981A>G synonymous_variant 0.12
clpC1 4039748 c.957G>C synonymous_variant 0.11
clpC1 4039751 c.954A>G synonymous_variant 0.11
clpC1 4039769 c.936C>G synonymous_variant 0.11
clpC1 4039778 c.927A>G synonymous_variant 0.14
clpC1 4039793 c.912C>G synonymous_variant 0.13
clpC1 4039850 c.855T>C synonymous_variant 0.11
clpC1 4040015 c.690G>C synonymous_variant 0.1
clpC1 4040033 c.672G>C synonymous_variant 0.12
clpC1 4040048 c.657C>T synonymous_variant 0.13
clpC1 4040546 c.159G>C synonymous_variant 0.11
clpC1 4040558 c.147G>C synonymous_variant 0.11
clpC1 4040561 c.144A>G synonymous_variant 0.11
clpC1 4040573 c.132T>C synonymous_variant 0.14
clpC1 4040579 c.126A>G synonymous_variant 0.12
clpC1 4040582 c.123G>C synonymous_variant 0.12
clpC1 4040585 c.120A>G synonymous_variant 0.13
embC 4239763 c.-100C>T upstream_gene_variant 1.0
embA 4242643 c.-590C>T upstream_gene_variant 1.0
embC 4242803 p.Val981Leu missense_variant 1.0
embB 4249408 c.2895G>A synonymous_variant 1.0
whiB6 4338595 c.-75delG upstream_gene_variant 1.0