Rv0006 - c.1029C>G


Drug resistance types
21 Sensitive 6 RR-TB 37 HR-TB 14 MDR-TB 3 Pre-XDR-TB 2 XDR-TB 159 Other
lineage Counts
lineage Count
La3;lineage2 1
lineage2.1;lineage4.9 14
lineage4.3.4.2.1 3
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage4.9;lineage6.3 10
lineage4.9 47
lineage4.8 4
lineage2.2.1 16
La3;lineage4.9 3
lineage4.1.2.1 10
La3;lineage1.1.2 1
21
lineage2.2 2
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.2.2.2 1
lineage4.1.1.1 2
lineage4.6.2.2 3
La1.7;lineage4.9 7
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.1.1.3 3
lineage2.2.2;lineage4 1
lineage1.2.2.2 1
lineage3 5
La1;lineage4.9 1
lineage4.9;lineage6.3 7
M.canetti;lineage2.1;lineage4.9 2
lineage4.1.3 2
M.canetti;lineage4.9 2
lineage4.5 1
lineage6.1.3 3
lineage2.1 5
lineage3.1 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage2.2.1.1 4
lineage5.1.4 1
M.canetti;lineage2.2 2
lineage4.9;lineage7 1
lineage4.1.1.3;lineage4.9 2
lineage4.1.2 1
La1.7;M.canetti;lineage4.9 2
lineage1.1.1 1
La3;lineage4.8 2
lineage6.3.1 1
lineage4.7 2
lineage2.1;lineage6.3 2
La1.7.1 1
lineage2.2.2 1
lineage2.2.1;lineage6.3 1
La3;lineage2.2.1 1
lineage3.1.1 1
lineage2.1;lineage4.3.2;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.3.2 1
La3 2
lineage4.3.4.1 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.4.1.1 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage1.2.1.2 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage2.1;lineage4.9 2
La3;lineage2.2.2 1
lineage4 1
lineage4.1;lineage4.8 2
lineage1.1.2 1
lineage4.8.1 1
M.canetti;lineage2.1;lineage6.3 1
La1.7;lineage4.2 1
La1.2 1
lineage4.9;lineage6.1.3 1
La1.2.BCG;La1.8.1 1
lineage4.6.1.1 1
spoligotype Counts
spoligotype Count
None 242
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR20969677 HR-TB La3;lineage2 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675214 Other lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR4817735 Other lineage4.8 None
ERR3797069 Other lineage4.9 None
SRR18003019 Other lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4817667 HR-TB lineage4.8 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR1196494 MDR-TB None
ERR4816585 Other lineage2.2 None
ERR067712 Sensitive lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR5341345 Sensitive lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
ERR4816999 Other None
ERR2513470 Other lineage4.2.2.2 None
ERR9786617 Other lineage4.1.1.1 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4769474 HR-TB lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4814396 Sensitive lineage4.1.1.3 None
SRR29093105 Other lineage2.2.2;lineage4 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4814639 HR-TB lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR29017461 Other La3;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4797201 Other lineage1.2.2.2 None
ERR990545 Other lineage3 None
SRR1165699 Other lineage4.9 None
SRR23961542 Other La1;lineage4.9 None
ERR4800341 Other lineage3 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR28119777 Other lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR1180172 Other lineage2.2.1 None
ERR10465958 Sensitive lineage4.5 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR1023236 Other lineage6.1.3 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR9787153 Other lineage6.1.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4407452 Other lineage3 None
SRR1184346 HR-TB lineage3.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1180147 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR7496472 Other lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR2513283 Sensitive lineage5.1.4 None
SRR3675221 Other lineage4.9 None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR234659 Other None
ERR4817060 Other None
ERR4814352 Other lineage2.2.1 None
ERR11465024 Other lineage4.1.1.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR4819781 Other lineage2.2.1 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1173363 Other None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR4818347 Other lineage4.1.2 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR9787165 Other lineage6.1.3 None
ERR4819314 Other lineage1.1.1 None
SRR1180137 Other lineage2.2.1 None
SRR3675385 Other La1.7;lineage4.9 None
ERR4817893 Other La3;lineage4.8 None
ERR9787139 Other lineage6.3.1 None
SRR1710057 Other lineage2.1 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4817896 HR-TB lineage2.2.1 None
SRR1183049 RR-TB lineage2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4819932 Other lineage4.7 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR3416776 Other lineage2.1 None
SRR5341296 Sensitive lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675492 Other La1.7;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR1181020 Other lineage2.2.1 None
SRR17658565 Pre-XDR-TB lineage3 None
SRR3675267 Other La1.7;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
ERR4815604 Other None
SRR18910194 HR-TB lineage2.2.2 None
ERR1063855 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR13423649 Sensitive lineage2.2.1 None
SRR3675461 RR-TB lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR6789626 Other None
SRR29055629 MDR-TB La3;lineage2.2.1 None
SRR28119753 Other lineage4.9 None
SRR1196474 Other lineage3.1.1 None
SRR1196546 Other lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR29093909 Other lineage4.9 None
ERR9117805 Other lineage4.3.2 None
ERR11465025 Other lineage4.1.1.3 None
SRR6046564 Sensitive lineage4.9 None
SRR1172728 RR-TB La3 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR9117709 Other None
SRR5341437 Sensitive lineage4.9 None
SRR3675549 Other lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR12015083 Other La3;lineage4.8 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR9786645 Other lineage4.6.2.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3804155 Other lineage4.1.2.1 None
ERR4800527 MDR-TB lineage2.2.1 None
SRR7131023 Other lineage4.1.2.1 None
ERR3797070 Other lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9786843 Other None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR11252664 Other lineage2.2.1 None
ERR212001 HR-TB None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR502908 HR-TB lineage2.2.1 None
ERR9786601 Other lineage4.1.2.1 None
SRR12142341 HR-TB lineage2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1181289 Other lineage2.2.1 None
SRR1184372 MDR-TB None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR3675572 Other None
SRR3675457 Other lineage4.9 None
SRR1196566 Other lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR9786694 Other lineage4.1.2.1 None
SRR1172951 Other lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4816762 Sensitive lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675275 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR6046210 Other lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR323115 Sensitive lineage4.9 None
SRR1184312 Other lineage2.2.1 None
SRR6045526 Other lineage4.9 None
SRR29093099 MDR-TB La3;lineage2.2.2 None
SRR6046066 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR3675248 Other lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR2512426 Sensitive lineage1.1.2 gb
ERR3283021 HR-TB lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4816466 HR-TB lineage4.9 None
SRR3675387 Other lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
ERR702406 Other lineage2.1 None
ERR4819546 HR-TB lineage3 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR3797047 MDR-TB lineage4.9 None
SRR1172817 Other La3 None
SRR1173400 Other lineage4.9 None
SRR7496509 Other None
SRR12416840 MDR-TB lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR3675488 Other La1.7;lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR2229542 Other lineage4.8 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR23961559 Other La1.7;lineage4.2 None
SRR3675311 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR23961549 Other La1.2 None
SRR5341456 Other lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR1184381 MDR-TB None
ERR2514692 Other None
SRR6789621 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR9786671 Other None
ERR176549 Other lineage4.3.4.2.1 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR7496523 Other lineage4.7 None
ERR9786604 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR1173778 Other lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR9786569 Other lineage4.8 None
SRR1196583 Other lineage4.9 None
ERR11252736 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR18213713 HR-TB None
SRR28119717 Other lineage4.9;lineage6.3 None