TB-Profiler result

Run: SRR1181289
Summary

Run ID: SRR1181289

Sample name:

Date: 03-04-2023 04:43:39

Number of reads: 705665

Percentage reads mapped: 64.54

Strain: lineage2.2.1

Drug-resistance: Other

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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage2 East-Asian Beijing RD105 1.0
lineage2.2 East-Asian (Beijing) Beijing-RD207 RD105;RD207 0.99
lineage2.2.1 East-Asian (Beijing) Beijing-RD181 RD105;RD207;RD181 0.96
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
rrs 1472307 n.462C>T non_coding_transcript_exon_variant 0.32 streptomycin
embB 4247448 p.His312Arg missense_variant 0.57 ethambutol
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrB 5848 c.609G>A synonymous_variant 0.2
gyrB 5849 c.610C>T synonymous_variant 0.21
gyrB 5854 c.615C>G synonymous_variant 0.22
gyrB 5860 c.621C>T synonymous_variant 0.24
gyrB 5863 c.624G>C synonymous_variant 0.25
gyrB 5873 c.634A>C synonymous_variant 0.24
gyrB 5878 c.639G>C synonymous_variant 0.17
gyrB 6100 c.861G>C synonymous_variant 0.17
gyrB 6103 c.864G>A synonymous_variant 0.18
gyrB 6115 c.876A>G synonymous_variant 0.32
gyrB 6123 p.Ala295Gly missense_variant 0.32
gyrB 6127 c.888G>T synonymous_variant 0.33
gyrB 6130 c.891T>C synonymous_variant 0.33
gyrB 6136 c.897G>A synonymous_variant 0.39
gyrB 6142 c.903G>C synonymous_variant 0.45
gyrB 6196 c.957C>T synonymous_variant 0.38
gyrB 6215 p.Ser326Thr missense_variant 0.25
gyrB 6223 c.984G>C synonymous_variant 0.28
gyrB 6238 c.999G>A synonymous_variant 0.19
gyrB 6268 c.1029C>G synonymous_variant 0.19
gyrB 6280 c.1041T>C synonymous_variant 0.17
gyrB 6286 c.1047T>C synonymous_variant 0.24
gyrB 6292 c.1053G>C synonymous_variant 0.19
gyrB 6295 c.1056A>G synonymous_variant 0.21
gyrB 6301 c.1062G>C synonymous_variant 0.21
gyrA 6304 c.-998C>G upstream_gene_variant 0.21
gyrA 6307 c.-995T>G upstream_gene_variant 0.21
gyrA 6313 c.-989C>T upstream_gene_variant 0.21
gyrA 6319 c.-983G>C upstream_gene_variant 0.31
gyrA 6361 c.-941G>A upstream_gene_variant 0.23
gyrA 6362 c.-940_-938delTTGinsCTC upstream_gene_variant 0.23
gyrA 6367 c.-935C>T upstream_gene_variant 0.21
gyrA 6376 c.-926G>A upstream_gene_variant 0.21
gyrA 6586 c.-716T>C upstream_gene_variant 0.21
gyrA 6610 c.-692C>G upstream_gene_variant 0.21
gyrA 6613 c.-689A>G upstream_gene_variant 0.21
gyrA 6616 c.-686A>G upstream_gene_variant 0.23
gyrA 6619 c.-683T>C upstream_gene_variant 0.23
gyrA 6637 c.-665T>G upstream_gene_variant 0.46
gyrA 6640 c.-662A>C upstream_gene_variant 0.5
gyrA 6643 c.-659A>G upstream_gene_variant 0.5
gyrA 6649 c.-653T>C upstream_gene_variant 0.54
gyrA 6655 c.-647T>C upstream_gene_variant 0.5
gyrA 6670 c.-632G>C upstream_gene_variant 0.5
gyrA 6673 c.-629A>C upstream_gene_variant 0.5
gyrA 6676 c.-626T>G upstream_gene_variant 0.47
gyrA 6700 c.-602T>C upstream_gene_variant 0.44
gyrA 6703 c.-599G>C upstream_gene_variant 0.44
gyrA 6706 c.-596G>A upstream_gene_variant 0.5
gyrA 6709 c.-593A>G upstream_gene_variant 0.5
gyrA 6712 c.-590G>T upstream_gene_variant 0.5
gyrA 6727 c.-575G>T upstream_gene_variant 0.38
gyrA 6728 c.-574_-572delCTAinsTTG upstream_gene_variant 0.38
gyrA 6760 c.-542G>C upstream_gene_variant 0.48
gyrA 6775 c.-527G>C upstream_gene_variant 0.43
gyrA 6793 c.-509T>C upstream_gene_variant 0.42
gyrB 6798 p.Gly520Ala missense_variant 0.43
gyrA 6808 c.-494C>T upstream_gene_variant 0.42
gyrA 6838 c.-464C>T upstream_gene_variant 0.36
gyrA 6841 c.-461T>C upstream_gene_variant 0.32
gyrA 6853 c.-449A>G upstream_gene_variant 0.23
gyrA 6856 c.-446T>C upstream_gene_variant 0.22
gyrA 6862 c.-440C>G upstream_gene_variant 0.18
gyrA 6865 c.-437G>C upstream_gene_variant 0.18
gyrA 6866 c.-436C>T upstream_gene_variant 0.2
gyrA 6878 c.-424T>C upstream_gene_variant 0.2
gyrA 6889 c.-413G>C upstream_gene_variant 0.18
gyrA 6901 c.-401G>A upstream_gene_variant 0.21
gyrA 6904 c.-398C>G upstream_gene_variant 0.17
gyrA 6931 c.-371A>G upstream_gene_variant 0.17
gyrA 6934 c.-368A>G upstream_gene_variant 0.18
gyrA 6949 c.-353A>G upstream_gene_variant 0.27
gyrA 6952 c.-350C>G upstream_gene_variant 0.27
gyrA 6967 c.-335T>C upstream_gene_variant 0.33
gyrA 6973 c.-329G>C upstream_gene_variant 0.33
gyrA 6976 c.-326A>G upstream_gene_variant 0.36
gyrA 6982 c.-320A>G upstream_gene_variant 0.33
gyrA 7000 c.-302C>T upstream_gene_variant 0.31
gyrA 7006 c.-296T>C upstream_gene_variant 0.33
gyrA 7007 c.-295C>T upstream_gene_variant 0.33
gyrA 7018 c.-284G>C upstream_gene_variant 0.22
gyrA 7021 c.-281G>C upstream_gene_variant 0.2
gyrB 7023 p.Leu595Gln missense_variant 0.22
gyrA 7030 c.-272C>G upstream_gene_variant 0.25
gyrA 7033 c.-269G>C upstream_gene_variant 0.25
gyrA 7165 c.-137C>G upstream_gene_variant 0.25
gyrA 7178 c.-124T>C upstream_gene_variant 0.32
gyrA 7216 c.-86G>C upstream_gene_variant 0.19
gyrA 7237 c.-65C>T upstream_gene_variant 0.2
gyrA 7246 c.-56T>C upstream_gene_variant 0.21
gyrA 7362 p.Glu21Gln missense_variant 1.0
gyrA 7382 c.81C>T synonymous_variant 0.23
gyrA 7391 c.90C>T synonymous_variant 0.23
gyrA 7394 c.93T>C synonymous_variant 0.23
gyrA 7415 c.114C>G synonymous_variant 0.21
gyrA 7427 c.126G>C synonymous_variant 0.31
gyrA 7442 c.141G>T synonymous_variant 0.33
gyrA 7451 c.150C>G synonymous_variant 0.17
gyrA 7457 c.156T>C synonymous_variant 0.15
gyrA 7502 c.201C>T synonymous_variant 0.24
gyrA 7514 c.213C>G synonymous_variant 0.3
gyrA 7523 c.222C>G synonymous_variant 0.26
gyrA 7526 c.225G>T synonymous_variant 0.26
gyrA 7532 c.231T>G synonymous_variant 0.25
gyrA 7538 c.237G>A synonymous_variant 0.25
gyrA 7541 c.240C>G synonymous_variant 0.25
gyrA 7547 c.246C>T synonymous_variant 0.33
gyrA 7556 c.255C>T synonymous_variant 0.38
gyrA 7559 c.258G>C synonymous_variant 0.36
gyrA 7585 p.Ser95Thr missense_variant 1.0
gyrA 7601 c.300C>G synonymous_variant 0.3
gyrA 7607 c.306C>G synonymous_variant 0.23
gyrA 7622 c.321C>T synonymous_variant 0.28
gyrA 7631 c.330G>T synonymous_variant 0.31
gyrA 7637 c.336C>G synonymous_variant 0.36
gyrA 7676 c.375G>C synonymous_variant 0.33
gyrA 7679 c.378G>C synonymous_variant 0.38
gyrA 7683 c.382A>C synonymous_variant 0.38
gyrA 7694 c.393A>G synonymous_variant 0.3
gyrA 7697 c.396C>G synonymous_variant 0.36
gyrA 7710 c.409_411delTTGinsCTC synonymous_variant 0.42
gyrA 7727 c.426G>C synonymous_variant 0.46
gyrA 7728 c.427_429delAGGinsCGC synonymous_variant 0.46
gyrA 7733 c.432A>G synonymous_variant 0.5
gyrA 7763 c.462T>C synonymous_variant 0.58
gyrA 7769 c.468C>T synonymous_variant 0.59
gyrA 7778 c.477G>C synonymous_variant 0.62
gyrA 7784 c.483A>G synonymous_variant 0.62
gyrA 7787 c.486G>A synonymous_variant 0.62
gyrA 7793 c.492G>C synonymous_variant 0.52
gyrA 7799 c.498A>G synonymous_variant 0.55
gyrA 7814 c.513C>G synonymous_variant 0.5
gyrA 7832 c.531G>T synonymous_variant 0.46
gyrA 7835 c.534A>C synonymous_variant 0.42
gyrA 7859 c.558A>G synonymous_variant 0.42
gyrA 7865 c.564T>C synonymous_variant 0.33
gyrA 7868 c.567C>T synonymous_variant 0.33
gyrA 7886 c.585T>C synonymous_variant 0.21
gyrA 8090 c.789C>G synonymous_variant 0.33
gyrA 8096 c.795T>C synonymous_variant 0.36
gyrA 8099 c.798T>C synonymous_variant 0.42
gyrA 8103 p.Ser268Ala missense_variant 0.42
gyrA 8121 c.820T>C synonymous_variant 0.38
gyrA 8129 c.828T>C synonymous_variant 0.44
gyrA 8135 c.834C>G synonymous_variant 0.38
gyrA 8156 c.855T>C synonymous_variant 0.38
gyrA 8168 c.867A>G synonymous_variant 0.36
gyrA 8177 c.876A>C synonymous_variant 0.38
gyrA 8324 c.1023T>C synonymous_variant 0.25
gyrA 8327 c.1026C>G synonymous_variant 0.25
gyrA 8330 c.1029C>G synonymous_variant 0.29
gyrA 8339 c.1038A>C synonymous_variant 0.3
gyrA 8340 p.Ala347Ser missense_variant 0.3
gyrA 8372 c.1071G>C synonymous_variant 0.3
gyrA 8375 c.1074G>C synonymous_variant 0.32
gyrA 8382 p.Leu361Met missense_variant 0.38
gyrA 8393 c.1092T>C synonymous_variant 0.36
gyrA 8399 c.1098T>C synonymous_variant 0.3
gyrA 8401 p.Asp367Ala missense_variant 0.32
gyrA 8420 c.1119T>C synonymous_variant 0.25
gyrA 8453 c.1152A>C synonymous_variant 0.2
gyrA 8472 c.1171C>T synonymous_variant 0.15
gyrA 8504 c.1203G>C synonymous_variant 0.19
gyrA 8516 c.1215T>C synonymous_variant 0.18
gyrA 8519 c.1218A>C synonymous_variant 0.15
gyrA 8528 c.1227G>C synonymous_variant 0.16
gyrA 8546 p.Asp415Glu missense_variant 0.25
gyrA 8552 c.1251C>G synonymous_variant 0.28
gyrA 8561 c.1260A>C synonymous_variant 0.37
gyrA 8603 c.1302A>G synonymous_variant 0.26
gyrA 8619 c.1318T>C synonymous_variant 0.3
gyrA 8624 c.1323G>C synonymous_variant 0.25
gyrA 8627 c.1326C>G synonymous_variant 0.27
gyrA 8636 c.1335A>C synonymous_variant 0.2
gyrA 8655 p.Ile452Val missense_variant 0.15
gyrA 8843 c.1542G>A synonymous_variant 0.25
gyrA 8849 c.1548C>G synonymous_variant 0.31
gyrA 8852 c.1551T>C synonymous_variant 0.29
gyrA 8858 c.1557T>C synonymous_variant 0.2
gyrA 8870 c.1569G>C synonymous_variant 0.23
gyrA 8873 c.1572A>C synonymous_variant 0.25
gyrA 8885 c.1584C>G synonymous_variant 0.29
gyrA 8897 c.1596T>C synonymous_variant 0.31
gyrA 8903 c.1602T>C synonymous_variant 0.33
gyrA 8915 c.1614A>G synonymous_variant 0.39
gyrA 8933 c.1632G>C synonymous_variant 0.4
gyrA 8939 c.1638T>C synonymous_variant 0.4
gyrA 8942 c.1641G>C synonymous_variant 0.4
gyrA 8966 c.1665C>G synonymous_variant 0.43
gyrA 8967 p.Ala556Arg missense_variant 0.41
gyrA 8990 c.1689C>G synonymous_variant 0.38
gyrA 8998 p.Leu566Trp missense_variant 0.42
gyrA 9002 c.1701C>T synonymous_variant 0.46
gyrA 9017 c.1716C>G synonymous_variant 0.41
gyrA 9023 c.1722A>C synonymous_variant 0.42
gyrA 9029 c.1728T>G synonymous_variant 0.38
gyrA 9051 c.1750T>C synonymous_variant 0.35
gyrA 9056 c.1755C>G synonymous_variant 0.32
gyrA 9065 c.1764C>G synonymous_variant 0.35
gyrA 9071 c.1770G>C synonymous_variant 0.32
gyrA 9074 c.1773G>C synonymous_variant 0.33
gyrA 9080 c.1779G>C synonymous_variant 0.27
gyrA 9092 c.1791C>G synonymous_variant 0.17
gyrA 9099 c.1798T>C synonymous_variant 0.18
gyrA 9218 c.1917C>T synonymous_variant 0.15
gyrA 9230 c.1929T>C synonymous_variant 0.15
gyrA 9242 c.1941A>G synonymous_variant 0.16
gyrA 9248 c.1947G>C synonymous_variant 0.25
gyrA 9267 p.Asn656Gly missense_variant 0.31
gyrA 9291 c.1990C>T synonymous_variant 0.35
gyrA 9296 c.1995T>C synonymous_variant 0.34
gyrA 9299 c.1998G>C synonymous_variant 0.37
gyrA 9304 p.Gly668Glu missense_variant 1.0
gyrA 9335 c.2034G>C synonymous_variant 0.53
gyrA 9345 c.2044A>C synonymous_variant 0.57
gyrA 9362 c.2061C>T synonymous_variant 0.52
gyrA 9365 c.2064G>A synonymous_variant 0.5
gyrA 9377 c.2076A>G synonymous_variant 0.48
gyrA 9383 c.2082T>C synonymous_variant 0.52
gyrA 9386 c.2085T>C synonymous_variant 0.55
gyrA 9395 c.2094G>C synonymous_variant 0.64
gyrA 9398 c.2097T>C synonymous_variant 0.64
gyrA 9419 c.2118T>C synonymous_variant 0.5
gyrA 9420 p.Ile707Ala missense_variant 0.5
gyrA 9429 p.Arg710Tyr missense_variant 0.5
gyrA 9435 c.2134C>T synonymous_variant 0.46
gyrA 9443 c.2142G>C synonymous_variant 0.46
gyrA 9452 c.2151G>C synonymous_variant 0.5
gyrA 9458 c.2157A>G synonymous_variant 0.58
gyrA 9467 c.2166T>C synonymous_variant 0.6
gyrA 9485 c.2184A>G synonymous_variant 0.36
gyrA 9488 c.2187G>C synonymous_variant 0.33
gyrA 9494 c.2193T>C synonymous_variant 0.18
gyrA 9542 c.2241T>C synonymous_variant 0.21
gyrA 9545 c.2244A>G synonymous_variant 0.21
gyrA 9548 c.2247T>C synonymous_variant 0.21
gyrA 9551 c.2250G>C synonymous_variant 0.21
gyrA 9560 c.2259C>G synonymous_variant 0.23
gyrA 9585 c.2284T>C synonymous_variant 0.17
gyrA 9593 c.2292G>T synonymous_variant 0.18
gyrA 9602 c.2301T>C synonymous_variant 0.18
gyrA 9608 c.2307C>T synonymous_variant 0.2
gyrA 9611 p.Asp770Glu missense_variant 0.22
fgd1 490815 c.33G>C synonymous_variant 0.17
fgd1 490818 c.36C>T synonymous_variant 0.18
fgd1 490827 c.45C>T synonymous_variant 0.17
fgd1 490851 c.69A>C synonymous_variant 0.2
fgd1 490854 c.72C>T synonymous_variant 0.22
fgd1 490947 c.165G>C synonymous_variant 0.25
fgd1 490948 p.Ser56Ala missense_variant 0.25
fgd1 490962 c.180T>C synonymous_variant 0.29
fgd1 490971 c.189A>G synonymous_variant 0.36
fgd1 490974 c.192T>C synonymous_variant 0.45
fgd1 490980 p.Asn66Lys missense_variant 0.42
fgd1 490981 c.199C>A synonymous_variant 0.42
fgd1 490987 p.Leu69Val missense_variant 0.45
fgd1 490998 c.216T>C synonymous_variant 0.42
fgd1 491007 c.225G>C synonymous_variant 0.4
fgd1 491013 c.231C>G synonymous_variant 0.4
fgd1 491034 c.252C>G synonymous_variant 0.3
fgd1 491526 c.744T>C synonymous_variant 0.23
fgd1 491542 c.760T>C synonymous_variant 0.27
fgd1 491547 c.765A>T synonymous_variant 0.29
fgd1 491550 c.768T>C synonymous_variant 0.31
fgd1 491560 p.His260Thr missense_variant 0.29
fgd1 491569 p.Asp263His missense_variant 0.42
fgd1 491578 p.Ile266Leu missense_variant 0.47
fgd1 491601 c.819T>C synonymous_variant 0.53
fgd1 491603 p.Ala274Glu missense_variant 0.53
fgd1 491610 c.828A>C synonymous_variant 0.5
fgd1 491616 c.834A>G synonymous_variant 0.5
fgd1 491620 p.Ile280Val missense_variant 0.44
fgd1 491643 c.861G>A synonymous_variant 0.27
fgd1 491646 c.864G>C synonymous_variant 0.27
fgd1 491658 c.876A>G synonymous_variant 0.2
fgd1 491661 c.879C>G synonymous_variant 0.23
fgd1 491742 c.960T>C synonymous_variant 1.0
mshA 575561 p.Met72Val missense_variant 0.33
mshA 575569 c.222A>G synonymous_variant 0.33
mshA 575571 p.Ser75Thr missense_variant 0.33
mshA 575587 c.240C>G synonymous_variant 0.29
mshA 575590 c.243T>G synonymous_variant 0.29
mshA 575593 c.246G>C synonymous_variant 0.25
mshA 575617 c.270C>G synonymous_variant 0.29
mshA 575907 p.Ala187Val missense_variant 1.0
ccsA 620226 c.336G>A synonymous_variant 0.18
ccsA 620245 c.355T>C synonymous_variant 0.27
ccsA 620249 p.Ser120Cys missense_variant 0.27
ccsA 620254 c.364_366delCTCinsTTG synonymous_variant 0.2
ccsA 620265 c.375C>G synonymous_variant 0.18
ccsA 620283 c.393T>C synonymous_variant 0.3
ccsA 620284 p.Ala132Pro missense_variant 0.25
ccsA 620288 p.Arg133Gln missense_variant 0.31
ccsA 620295 c.405G>C synonymous_variant 0.31
ccsA 620307 c.417C>G synonymous_variant 0.33
ccsA 620317 p.Val143Leu missense_variant 0.3
ccsA 620340 c.450C>G synonymous_variant 0.3
ccsA 620349 c.459A>G synonymous_variant 0.33
ccsA 620362 p.Ala158Thr missense_variant 0.25
ccsA 620367 c.477T>C synonymous_variant 0.25
ccsA 620373 c.483C>G synonymous_variant 0.21
ccsA 620385 c.495G>C synonymous_variant 0.21
ccsA 620412 c.522T>C synonymous_variant 0.15
ccsA 620415 c.525T>C synonymous_variant 0.15
ccsA 620625 p.Ile245Met missense_variant 1.0
ccsA 620703 c.813G>C synonymous_variant 0.29
ccsA 620710 p.Val274Ile missense_variant 0.43
ccsA 620718 c.828G>C synonymous_variant 0.5
ccsA 620730 c.840C>T synonymous_variant 0.42
ccsA 620733 c.843G>C synonymous_variant 0.38
ccsA 620734 c.844C>A synonymous_variant 0.36
ccsA 620739 c.849A>G synonymous_variant 0.36
ccsA 620748 c.858T>A synonymous_variant 0.42
ccsA 620758 c.868_870delCGCinsAGG synonymous_variant 0.45
ccsA 620763 c.873G>A synonymous_variant 0.46
ccsA 620784 c.894C>A synonymous_variant 0.29
ccsA 620787 c.897C>G synonymous_variant 0.27
ccsA 620790 c.900C>T synonymous_variant 0.24
ccsA 620809 c.919C>T synonymous_variant 0.24
ccsA 620829 c.939G>C synonymous_variant 0.15
ccsA 620832 c.942C>T synonymous_variant 0.17
ccsA 620835 c.945C>G synonymous_variant 0.18
ccsA 620858 c.968_969insC frameshift_variant 0.15
rpoB 759629 c.-178T>C upstream_gene_variant 0.2
rpoB 759644 c.-163T>A upstream_gene_variant 0.19
rpoB 759647 c.-160T>C upstream_gene_variant 0.19
rpoB 760067 c.261G>C synonymous_variant 0.25
rpoB 760070 c.264T>G synonymous_variant 0.25
rpoB 760091 c.285G>C synonymous_variant 0.26
rpoB 760101 c.295T>C synonymous_variant 0.26
rpoB 760112 c.306T>C synonymous_variant 0.33
rpoB 760118 c.312T>C synonymous_variant 0.36
rpoB 760130 p.Asp108Glu missense_variant 0.41
rpoB 760139 c.333A>G synonymous_variant 0.35
rpoB 760142 c.336C>G synonymous_variant 0.32
rpoB 760181 c.375T>C synonymous_variant 0.33
rpoB 760184 c.378A>G synonymous_variant 0.33
rpoB 760196 c.390C>G synonymous_variant 0.36
rpoB 760223 c.417T>C synonymous_variant 0.32
rpoB 760235 c.429T>C synonymous_variant 0.43
rpoB 760244 c.438G>C synonymous_variant 0.44
rpoB 760256 c.450C>T synonymous_variant 0.47
rpoB 760274 c.468G>A synonymous_variant 0.48
rpoB 760283 c.477G>C synonymous_variant 0.44
rpoB 760328 c.522G>C synonymous_variant 0.43
rpoB 760331 c.525G>C synonymous_variant 0.4
rpoB 760337 c.531C>G synonymous_variant 0.33
rpoB 760340 c.534G>C synonymous_variant 0.33
rpoB 760361 c.555T>C synonymous_variant 0.37
rpoB 760370 c.564C>G synonymous_variant 0.38
rpoB 760376 p.Asp190Glu missense_variant 0.31
rpoB 760380 p.Thr192Leu missense_variant 0.31
rpoB 760403 c.597C>T synonymous_variant 0.33
rpoB 760424 c.618C>G synonymous_variant 0.34
rpoB 760430 c.624T>C synonymous_variant 0.33
rpoB 760460 c.654G>C synonymous_variant 0.31
rpoB 760475 c.669A>G synonymous_variant 0.33
rpoB 760481 c.675G>C synonymous_variant 0.31
rpoB 760484 c.678A>G synonymous_variant 0.33
rpoB 760511 c.705G>C synonymous_variant 0.36
rpoB 760520 c.714C>G synonymous_variant 0.33
rpoB 760522 p.Ser239Asn missense_variant 0.29
rpoB 760532 c.726T>C synonymous_variant 0.2
rpoB 760533 p.Val243Thr missense_variant 0.2
rpoB 760547 c.741G>T synonymous_variant 0.24
rpoB 760563 p.Arg253Met missense_variant 0.27
rpoB 760591 p.Val262Ala missense_variant 0.38
rpoB 760598 c.792C>T synonymous_variant 0.37
rpoB 760611 c.805T>C synonymous_variant 0.3
rpoB 760646 c.840C>G synonymous_variant 0.39
rpoB 760655 c.849A>G synonymous_variant 0.38
rpoB 760661 c.855A>G synonymous_variant 0.38
rpoB 760670 c.864G>C synonymous_variant 0.4
rpoB 760674 c.868T>C synonymous_variant 0.36
rpoB 760679 c.873A>G synonymous_variant 0.36
rpoB 760683 c.877T>C synonymous_variant 0.32
rpoB 760724 c.918T>C synonymous_variant 0.43
rpoB 760730 c.924T>C synonymous_variant 0.36
rpoB 760751 c.945G>C synonymous_variant 0.36
rpoB 760755 p.His317Asn missense_variant 0.36
rpoB 760765 p.Glu320Ala missense_variant 0.39
rpoB 760769 c.963C>G synonymous_variant 0.38
rpoB 760793 c.987A>G synonymous_variant 0.44
rpoB 760805 c.999G>C synonymous_variant 0.38
rpoB 760817 c.1011A>G synonymous_variant 0.36
rpoB 760820 c.1014T>C synonymous_variant 0.36
rpoB 760830 c.1024T>C synonymous_variant 0.25
rpoB 760841 c.1035T>C synonymous_variant 0.26
rpoB 760845 p.Thr347Ala missense_variant 0.22
rpoB 760856 c.1050C>G synonymous_variant 0.17
rpoB 760919 c.1113C>G synonymous_variant 0.31
rpoB 760925 c.1119T>C synonymous_variant 0.31
rpoB 760928 c.1122G>C synonymous_variant 0.39
rpoB 760931 c.1125C>G synonymous_variant 0.39
rpoB 760946 c.1140A>G synonymous_variant 0.45
rpoB 760982 c.1176G>C synonymous_variant 0.44
rpoB 760991 c.1185G>C synonymous_variant 0.46
rpoB 761006 c.1200C>G synonymous_variant 0.36
rpoB 761015 c.1209G>C synonymous_variant 0.39
rpoB 761021 c.1215G>C synonymous_variant 0.46
rpoB 761027 c.1221A>G synonymous_variant 0.48
rpoB 761036 c.1230G>C synonymous_variant 0.48
rpoB 761037 c.1231T>C synonymous_variant 0.48
rpoB 761057 c.1251G>C synonymous_variant 0.57
rpoB 761097 c.1291_1293delAGCinsTCG synonymous_variant 0.44
rpoB 761102 c.1296A>G synonymous_variant 0.46
rpoB 761129 c.1323G>C synonymous_variant 0.42
rpoB 761133 c.1327_1329delTTGinsCTC synonymous_variant 0.41
rpoB 761147 c.1341C>T synonymous_variant 0.41
rpoB 761150 c.1344A>C synonymous_variant 0.41
rpoB 761165 c.1359G>C synonymous_variant 0.41
rpoB 761180 c.1374A>C synonymous_variant 0.35
rpoB 761189 c.1383T>C synonymous_variant 0.35
rpoB 761195 c.1389G>C synonymous_variant 0.42
rpoB 761207 c.1401C>T synonymous_variant 0.59
rpoB 761234 c.1428G>C synonymous_variant 0.6
rpoB 761249 c.1443A>G synonymous_variant 0.63
rpoB 761255 c.1449T>G synonymous_variant 0.61
rpoB 761261 c.1455G>T synonymous_variant 0.58
rpoB 761264 c.1458C>G synonymous_variant 0.59
rpoB 761318 c.1512G>C synonymous_variant 0.33
rpoB 761327 c.1521A>G synonymous_variant 0.29
rpoB 761345 c.1539G>C synonymous_variant 0.21
rpoB 761477 c.1671C>G synonymous_variant 0.17
rpoB 761492 c.1686G>C synonymous_variant 0.27
rpoB 761504 c.1698C>G synonymous_variant 0.37
rpoB 761510 c.1704T>C synonymous_variant 0.33
rpoB 761531 c.1725C>G synonymous_variant 0.47
rpoB 761537 c.1731C>G synonymous_variant 0.5
rpoB 761561 c.1755C>G synonymous_variant 0.62
rpoB 761564 c.1758G>C synonymous_variant 0.62
rpoB 761570 c.1764T>C synonymous_variant 0.62
rpoB 761573 c.1767C>G synonymous_variant 0.62
rpoB 761579 c.1773G>C synonymous_variant 0.56
rpoB 761603 c.1797C>G synonymous_variant 0.56
rpoB 761606 c.1800C>G synonymous_variant 0.61
rpoB 761612 c.1806G>C synonymous_variant 0.69
rpoB 761615 c.1809A>C synonymous_variant 0.65
rpoB 761636 c.1830G>T synonymous_variant 0.47
rpoB 761645 c.1839C>G synonymous_variant 0.56
rpoB 761648 c.1842T>C synonymous_variant 0.56
rpoB 761657 c.1851C>G synonymous_variant 0.53
rpoB 761660 c.1854G>A synonymous_variant 0.53
rpoB 761669 c.1863C>T synonymous_variant 0.41
rpoB 761675 c.1869G>C synonymous_variant 0.44
rpoB 761772 p.His656Ala missense_variant 0.17
rpoB 761778 p.Asn658Asp missense_variant 0.17
rpoB 761791 p.Arg662His missense_variant 0.25
rpoB 761813 c.2007T>C synonymous_variant 0.25
rpoB 761815 p.Ala670Glu missense_variant 0.25
rpoB 761825 c.2019C>T synonymous_variant 0.24
rpoB 761834 c.2028T>C synonymous_variant 0.21
rpoB 761909 c.2103T>C synonymous_variant 0.17
rpoB 761912 c.2106T>C synonymous_variant 0.17
rpoB 761916 p.Asp704Asn missense_variant 0.14
rpoB 761948 c.2142G>C synonymous_variant 0.23
rpoB 761954 c.2148C>G synonymous_variant 0.26
rpoB 761969 c.2163G>A synonymous_variant 0.3
rpoB 761972 c.2166C>G synonymous_variant 0.31
rpoB 761999 c.2193G>C synonymous_variant 0.39
rpoB 762008 c.2202C>G synonymous_variant 0.39
rpoB 762014 c.2208C>T synonymous_variant 0.39
rpoB 762017 c.2211A>G synonymous_variant 0.43
rpoB 762053 c.2247T>C synonymous_variant 0.38
rpoB 762062 c.2256T>C synonymous_variant 0.32
rpoB 762065 c.2259T>C synonymous_variant 0.29
rpoB 762074 c.2268C>G synonymous_variant 0.29
rpoB 762083 c.2277T>C synonymous_variant 0.25
rpoB 762086 c.2280G>C synonymous_variant 0.25
rpoB 762101 c.2295C>G synonymous_variant 0.27
rpoB 762114 p.Ile770Val missense_variant 0.29
rpoB 762131 c.2325C>G synonymous_variant 0.35
rpoB 762143 c.2337T>C synonymous_variant 0.39
rpoB 762149 c.2343G>C synonymous_variant 0.43
rpoB 762185 c.2379G>C synonymous_variant 0.43
rpoB 762233 c.2427G>C synonymous_variant 0.48
rpoB 762254 c.2448T>C synonymous_variant 0.42
rpoB 762257 c.2451C>G synonymous_variant 0.42
rpoB 762284 c.2478G>T synonymous_variant 0.53
rpoB 762293 c.2487T>C synonymous_variant 0.53
rpoB 762296 c.2490G>C synonymous_variant 0.53
rpoB 762317 c.2511A>G synonymous_variant 0.42
rpoB 762329 c.2523G>C synonymous_variant 0.4
rpoB 762338 c.2532T>C synonymous_variant 0.38
rpoB 762347 c.2541T>C synonymous_variant 0.41
rpoB 762362 p.Glu852Asp missense_variant 0.38
rpoB 762369 c.2563T>C synonymous_variant 0.31
rpoC 762398 c.-972T>C upstream_gene_variant 0.28
rpoC 762401 c.-969G>C upstream_gene_variant 0.27
rpoC 762404 c.-966T>C upstream_gene_variant 0.25
rpoC 762410 c.-960T>C upstream_gene_variant 0.28
rpoC 762416 c.-954A>G upstream_gene_variant 0.31
rpoC 762443 c.-927G>C upstream_gene_variant 0.32
rpoC 762449 c.-921C>A upstream_gene_variant 0.26
rpoC 762452 c.-918G>C upstream_gene_variant 0.23
rpoC 762470 c.-900G>C upstream_gene_variant 0.35
rpoC 762476 c.-894C>A upstream_gene_variant 0.33
rpoB 762489 p.Val895Gln missense_variant 0.29
rpoC 762509 c.-861T>G upstream_gene_variant 0.42
rpoB 762510 p.Ala902Pro missense_variant 0.42
rpoC 762533 c.-837T>C upstream_gene_variant 0.33
rpoC 762536 c.-834T>C upstream_gene_variant 0.31
rpoC 762537 c.-833T>C upstream_gene_variant 0.31
rpoC 762545 c.-825C>G upstream_gene_variant 0.36
rpoC 762551 c.-819C>T upstream_gene_variant 0.36
rpoC 762581 c.-789T>C upstream_gene_variant 0.19
rpoB 762750 p.Leu982Met missense_variant 0.2
rpoC 762753 c.-617T>C upstream_gene_variant 0.21
rpoC 762758 c.-612G>C upstream_gene_variant 0.24
rpoC 762782 c.-588T>C upstream_gene_variant 0.41
rpoB 762785 p.Asp993Glu missense_variant 0.41
rpoC 762788 c.-582G>C upstream_gene_variant 0.41
rpoB 762789 p.Leu995Met missense_variant 0.41
rpoB 762795 p.Asp997Asn missense_variant 0.45
rpoB 762799 p.Ala998Gly missense_variant 0.48
rpoC 762812 c.-558C>G upstream_gene_variant 0.47
rpoB 762813 p.Met1003Val missense_variant 0.44
rpoC 762818 c.-552C>G upstream_gene_variant 0.47
rpoC 762827 c.-543G>C upstream_gene_variant 0.53
rpoC 762833 c.-537C>T upstream_gene_variant 0.59
rpoC 762857 c.-513C>G upstream_gene_variant 0.48
rpoC 762860 c.-510G>C upstream_gene_variant 0.48
rpoC 762863 c.-507T>G upstream_gene_variant 0.5
rpoC 762899 c.-471G>C upstream_gene_variant 0.43
rpoC 762929 c.-441G>T upstream_gene_variant 0.42
rpoC 762947 c.-423C>G upstream_gene_variant 0.44
rpoC 762962 c.-408C>T upstream_gene_variant 0.33
rpoC 762983 c.-387C>T upstream_gene_variant 0.34
rpoC 762989 c.-381G>C upstream_gene_variant 0.28
rpoC 762995 c.-375G>C upstream_gene_variant 0.31
rpoC 763028 c.-342T>C upstream_gene_variant 0.35
rpoC 763031 c.-339T>G upstream_gene_variant 1.0
rpoC 763034 c.-336C>G upstream_gene_variant 0.36
rpoC 763040 c.-330C>G upstream_gene_variant 0.37
rpoC 763070 c.-300T>C upstream_gene_variant 0.52
rpoC 763085 c.-285C>G upstream_gene_variant 0.54
rpoC 763115 c.-255T>C upstream_gene_variant 0.61
rpoC 763139 c.-231C>T upstream_gene_variant 0.5
rpoC 763148 c.-222G>C upstream_gene_variant 0.52
rpoC 763158 c.-212C>T upstream_gene_variant 0.5
rpoC 763166 c.-204A>G upstream_gene_variant 0.45
rpoC 763202 c.-168A>C upstream_gene_variant 0.33
rpoC 763205 c.-165G>C upstream_gene_variant 0.33
rpoC 763206 c.-164_-162delAGTinsTCG upstream_gene_variant 0.33
rpoC 763226 c.-144A>G upstream_gene_variant 0.33
rpoC 763238 c.-132T>C upstream_gene_variant 0.33
rpoC 763253 c.-117G>C upstream_gene_variant 0.25
rpoC 763262 c.-108C>G upstream_gene_variant 0.15
rpoC 763402 c.33C>T synonymous_variant 0.25
rpoC 763408 c.39T>C synonymous_variant 0.29
rpoC 763411 c.42T>G synonymous_variant 0.26
rpoC 763414 c.45T>C synonymous_variant 0.26
rpoC 763441 c.72C>T synonymous_variant 0.36
rpoC 763444 c.75T>C synonymous_variant 0.42
rpoC 763456 c.87A>G synonymous_variant 0.42
rpoC 763486 c.117T>G synonymous_variant 0.43
rpoC 763501 c.132C>T synonymous_variant 0.48
rpoC 763528 c.159G>A synonymous_variant 0.44
rpoC 763546 c.177A>G synonymous_variant 0.41
rpoC 763570 c.201G>C synonymous_variant 0.4
rpoC 763573 c.204G>C synonymous_variant 0.41
rpoC 763576 c.207C>G synonymous_variant 0.42
rpoC 763594 c.225C>T synonymous_variant 0.43
rpoC 763603 c.234C>T synonymous_variant 0.44
rpoC 763636 c.267T>C synonymous_variant 0.34
rpoC 763660 c.291T>G synonymous_variant 0.25
rpoC 763675 c.306C>G synonymous_variant 0.2
rpoC 763696 c.327T>C synonymous_variant 0.3
rpoC 763702 c.333C>G synonymous_variant 0.19
rpoC 763703 c.334_336delTCGinsAGC synonymous_variant 0.2
rpoC 763711 c.342G>C synonymous_variant 0.18
rpoC 763714 c.345G>T synonymous_variant 0.2
rpoC 763717 c.348T>C synonymous_variant 0.21
rpoC 763723 c.354G>C synonymous_variant 0.2
rpoC 763732 c.363C>G synonymous_variant 0.27
rpoC 763741 c.372C>T synonymous_variant 0.31
rpoC 763744 c.375G>C synonymous_variant 0.31
rpoC 763765 c.396T>C synonymous_variant 0.44
rpoC 763774 c.405G>C synonymous_variant 0.47
rpoC 763792 p.Glu141Asp missense_variant 0.31
rpoC 763807 c.438T>C synonymous_variant 0.24
rpoC 763816 c.447C>G synonymous_variant 0.25
rpoC 763835 p.Ala156Met missense_variant 0.23
rpoC 763852 c.483C>G synonymous_variant 0.25
rpoC 763853 p.Val162Ile missense_variant 0.27
rpoC 763858 c.489A>G synonymous_variant 0.27
rpoC 763872 p.Gly168Ala missense_variant 0.27
rpoC 763876 p.Glu169Asp missense_variant 0.27
rpoC 763879 c.510A>G synonymous_variant 0.27
rpoC 763891 c.522G>C synonymous_variant 0.38
rpoC 763894 c.525A>G synonymous_variant 0.38
rpoC 763900 c.531G>C synonymous_variant 0.43
rpoC 764011 c.642T>C synonymous_variant 0.29
rpoC 764059 c.690G>T synonymous_variant 0.62
rpoC 764083 c.714A>G synonymous_variant 0.62
rpoC 764098 c.729A>G synonymous_variant 0.54
rpoC 764101 c.732C>G synonymous_variant 0.5
rpoC 764102 p.Val245Ile missense_variant 0.5
rpoC 764112 p.Tyr248Phe missense_variant 0.59
rpoC 764116 c.747C>T synonymous_variant 0.59
rpoC 764131 c.762T>C synonymous_variant 0.59
rpoC 764134 c.765C>G synonymous_variant 0.58
rpoC 764198 c.829C>T synonymous_variant 0.38
rpoC 764203 c.834G>T synonymous_variant 0.35
rpoC 764206 c.837T>C synonymous_variant 0.31
rpoC 764213 p.Arg282Lys missense_variant 0.27
rpoC 764257 c.888G>C synonymous_variant 0.53
rpoC 764266 c.897T>C synonymous_variant 0.47
rpoC 764269 c.900G>C synonymous_variant 0.5
rpoC 764278 c.909A>G synonymous_variant 0.56
rpoC 764287 c.918C>T synonymous_variant 0.59
rpoC 764293 c.924G>C synonymous_variant 0.56
rpoC 764338 c.969G>A synonymous_variant 0.71
rpoC 764365 c.996C>T synonymous_variant 0.72
rpoC 764380 c.1011G>C synonymous_variant 0.5
rpoC 764383 c.1014C>G synonymous_variant 0.47
rpoC 764387 c.1018_1020delTTGinsCTC synonymous_variant 0.47
rpoC 764405 c.1036_1038delAGGinsCGC synonymous_variant 0.44
rpoC 764428 c.1059G>A synonymous_variant 0.39
rpoC 764431 c.1062G>C synonymous_variant 0.35
rpoC 764434 c.1065A>G synonymous_variant 0.38
rpoC 764446 c.1077T>C synonymous_variant 0.47
rpoC 764449 c.1080G>C synonymous_variant 0.44
rpoC 764452 c.1083T>C synonymous_variant 0.35
rpoC 764458 c.1089G>C synonymous_variant 0.38
rpoC 764461 c.1092A>G synonymous_variant 0.36
rpoC 764497 c.1128A>G synonymous_variant 0.33
rpoC 764500 c.1131C>G synonymous_variant 0.4
rpoC 764527 c.1158C>T synonymous_variant 0.29
rpoC 764536 c.1167G>C synonymous_variant 0.29
rpoC 764539 c.1170C>G synonymous_variant 0.29
rpoC 764548 c.1179G>A synonymous_variant 0.29
rpoC 764554 c.1185C>T synonymous_variant 0.29
rpoC 764560 c.1191T>C synonymous_variant 0.38
rpoC 764566 c.1197C>G synonymous_variant 0.5
rpoC 764575 c.1206T>C synonymous_variant 0.43
rpoC 764581 c.1212T>C synonymous_variant 0.43
rpoC 764593 c.1224C>T synonymous_variant 0.5
rpoC 764611 c.1242G>C synonymous_variant 0.48
rpoC 764626 c.1257C>T synonymous_variant 0.52
rpoC 764650 c.1281G>T synonymous_variant 0.58
rpoC 764668 c.1299C>T synonymous_variant 0.58
rpoC 764764 c.1395T>C synonymous_variant 0.38
rpoC 764803 c.1434C>T synonymous_variant 0.35
rpoC 764809 c.1440C>T synonymous_variant 0.33
rpoC 764815 c.1446A>G synonymous_variant 0.29
rpoC 764827 c.1458G>C synonymous_variant 0.41
rpoC 764858 c.1489T>C synonymous_variant 0.55
rpoC 764872 c.1503A>G synonymous_variant 0.56
rpoC 764888 c.1519T>C synonymous_variant 0.53
rpoC 764932 c.1563C>G synonymous_variant 0.53
rpoC 764948 c.1579T>C synonymous_variant 0.43
rpoC 764968 c.1599T>C synonymous_variant 0.45
rpoC 764995 c.1626C>G synonymous_variant 0.41
rpoC 765007 c.1638T>G synonymous_variant 0.35
rpoC 765008 c.1639T>C synonymous_variant 0.31
rpoC 765019 c.1650A>G synonymous_variant 0.31
rpoC 765034 c.1665T>C synonymous_variant 0.29
rpoC 765041 c.1672T>C synonymous_variant 0.17
rpoC 765047 c.1678T>C synonymous_variant 0.15
rpoC 765233 p.Ala622Ser missense_variant 0.15
rpoC 765244 c.1875T>C synonymous_variant 0.18
rpoC 765247 c.1878C>G synonymous_variant 0.18
rpoC 765248 c.1879T>C synonymous_variant 0.18
rpoC 765251 c.1882_1884delAGCinsTCG synonymous_variant 0.18
rpoC 765287 c.1918C>T synonymous_variant 0.31
rpoC 765292 c.1923G>T synonymous_variant 0.31
rpoC 765300 p.Val644Ala missense_variant 0.33
rpoC 765319 c.1950A>G synonymous_variant 0.27
rpoC 765326 p.His653Ala missense_variant 0.26
rpoC 765330 p.Ser654Asn missense_variant 0.32
rpoC 765370 c.2001G>T synonymous_variant 0.35
rpoC 765371 c.2002C>T synonymous_variant 0.32
rpoC 765379 c.2010G>T synonymous_variant 0.32
rpoC 765383 p.Met672Leu missense_variant 0.32
rpoC 765394 c.2025G>A synonymous_variant 0.36
rpoC 765404 p.Leu679Val missense_variant 0.43
rpoC 765409 c.2040T>C synonymous_variant 0.47
rpoC 765412 c.2043T>C synonymous_variant 0.45
rpoC 765421 c.2052C>G synonymous_variant 0.57
rpoC 765451 c.2082C>G synonymous_variant 0.65
rpoC 765454 c.2085C>G synonymous_variant 0.65
rpoC 765469 c.2100G>C synonymous_variant 0.67
rpoC 765478 c.2109T>C synonymous_variant 0.63
rpoC 765499 c.2130C>G synonymous_variant 0.53
rpoC 765508 c.2139C>G synonymous_variant 0.52
rpoC 765529 c.2160C>T synonymous_variant 0.45
rpoC 765541 c.2172C>G synonymous_variant 0.44
rpoC 765553 c.2184C>T synonymous_variant 0.38
rpoC 765556 c.2187G>C synonymous_variant 0.39
rpoC 765562 c.2193G>C synonymous_variant 0.4
rpoC 765580 c.2211G>C synonymous_variant 0.29
rpoC 765583 c.2214G>C synonymous_variant 0.31
rpoC 765613 p.His748Gln missense_variant 0.35
rpoC 765625 c.2256C>G synonymous_variant 0.33
rpoC 765628 c.2259G>C synonymous_variant 0.35
rpoC 765631 p.Asp754Glu missense_variant 0.37
rpoC 765646 c.2277G>A synonymous_variant 0.37
rpoC 765658 c.2289C>T synonymous_variant 0.39
rpoC 765700 c.2331T>C synonymous_variant 0.46
rpoC 765734 c.2365T>C synonymous_variant 0.43
rpoC 765739 c.2370G>T synonymous_variant 0.36
rpoC 765751 c.2382C>G synonymous_variant 0.42
rpoC 765753 p.Asp795Ala missense_variant 0.4
rpoC 765772 c.2403C>G synonymous_variant 0.33
rpoC 765778 c.2409C>G synonymous_variant 0.36
rpoC 765784 c.2415C>G synonymous_variant 0.33
rpoC 765793 c.2424C>G synonymous_variant 0.35
rpoC 765796 c.2427C>T synonymous_variant 0.33
rpoC 765811 c.2442T>G synonymous_variant 0.24
rpoC 765826 c.2457T>C synonymous_variant 0.17
rpoC 765886 c.2517C>G synonymous_variant 0.25
rpoC 765928 c.2559C>G synonymous_variant 0.32
rpoC 765967 c.2598C>T synonymous_variant 0.29
rpoC 765973 c.2604C>G synonymous_variant 0.25
rpoC 765979 c.2610C>G synonymous_variant 0.2
rpoC 765982 c.2613C>T synonymous_variant 0.21
rpoC 765994 c.2625A>T synonymous_variant 0.23
rpoC 766009 c.2640G>C synonymous_variant 0.15
rpoC 766010 p.Ser881Thr missense_variant 0.14
rpoC 766021 c.2652G>C synonymous_variant 0.15
rpoC 766027 c.2658G>C synonymous_variant 0.2
rpoC 766381 c.3012C>T synonymous_variant 0.24
rpoC 766384 c.3015A>G synonymous_variant 0.28
rpoC 766390 c.3021C>T synonymous_variant 0.28
rpoC 766408 c.3039C>T synonymous_variant 0.35
rpoC 766426 c.3057C>T synonymous_variant 0.36
rpoC 766447 c.3078T>C synonymous_variant 0.5
rpoC 766462 c.3093G>T synonymous_variant 0.54
rpoC 766483 c.3114G>C synonymous_variant 0.54
rpoC 766484 p.Val1039Ile missense_variant 0.54
rpoC 766492 c.3123T>C synonymous_variant 0.57
rpoC 766522 c.3153C>T synonymous_variant 0.55
rpoC 766531 c.3162G>T synonymous_variant 0.52
rpoC 766543 c.3174C>T synonymous_variant 0.42
rpoC 766549 c.3180G>C synonymous_variant 0.47
rpoC 766573 c.3204T>C synonymous_variant 0.47
rpoC 766583 p.Gly1072Ser missense_variant 0.47
rpoC 766588 c.3219G>A synonymous_variant 0.44
rpoC 766591 c.3222A>G synonymous_variant 0.44
rpoC 766597 c.3228C>G synonymous_variant 0.44
rpoC 766607 p.Ile1080Leu missense_variant 0.4
rpoC 766618 c.3249G>C synonymous_variant 0.36
rpoC 766621 c.3252G>A synonymous_variant 0.36
rpoC 766645 c.3276A>G synonymous_variant 0.5
rpoC 766657 c.3288A>G synonymous_variant 0.43
rpoC 766666 c.3297C>G synonymous_variant 0.43
rpoC 766672 c.3303T>C synonymous_variant 0.44
rpoC 766726 c.3357T>C synonymous_variant 0.45
rpoC 766738 c.3369G>C synonymous_variant 0.5
rpoC 766765 c.3396A>C synonymous_variant 0.5
rpoC 766774 c.3405T>C synonymous_variant 0.52
rpoC 766801 c.3432C>T synonymous_variant 0.48
rpoC 766804 c.3435A>G synonymous_variant 0.52
rpoC 766843 c.3474T>C synonymous_variant 0.4
rpoC 766861 c.3492G>C synonymous_variant 0.32
rpoC 766864 c.3495G>C synonymous_variant 0.3
rpoC 766894 c.3525T>C synonymous_variant 0.19
rpoC 766924 p.Glu1185Asp missense_variant 0.15
rpoC 766933 c.3564A>G synonymous_variant 0.19
rpoC 766945 c.3576A>G synonymous_variant 0.24
rpoC 766963 c.3594T>C synonymous_variant 0.22
rpoC 766972 c.3603G>C synonymous_variant 0.23
rpoC 766978 c.3609C>G synonymous_variant 0.27
rpoC 766996 c.3627C>T synonymous_variant 0.29
rpoC 767002 c.3633G>C synonymous_variant 0.3
rpoC 767033 c.3664_3666delTCGinsAGC synonymous_variant 0.2
rpoC 767059 c.3690T>G synonymous_variant 0.28
rpoC 767062 c.3693C>T synonymous_variant 0.29
rpoC 767065 c.3696G>A synonymous_variant 0.29
rpoC 767098 c.3729T>C synonymous_variant 0.27
rpoC 767102 c.3733_3735delCTCinsTTG synonymous_variant 0.25
rpoC 767105 p.Asn1246Gln missense_variant 0.25
rpoC 767119 c.3750A>G synonymous_variant 0.42
rpoC 767134 c.3765C>A synonymous_variant 0.47
rpoC 767167 c.3798C>G synonymous_variant 0.6
rpoC 767180 p.Ala1271Gln missense_variant 0.53
rpoC 767191 c.3822C>G synonymous_variant 0.58
rpoC 767206 c.3837C>G synonymous_variant 0.5
rpoC 767209 c.3840T>C synonymous_variant 0.47
rpoC 767212 c.3843G>C synonymous_variant 0.47
rpoC 767221 c.3852C>G synonymous_variant 0.47
rpoC 767230 c.3861G>C synonymous_variant 0.39
rpoC 767233 c.3864T>C synonymous_variant 0.33
mmpL5 775639 p.Ile948Val missense_variant 1.0
mmpL5 775913 c.2568C>G synonymous_variant 0.2
mmpL5 775916 c.2565T>G synonymous_variant 0.2
mmpL5 775966 p.Ala839Ser missense_variant 0.17
mmpL5 776100 p.Thr794Ile missense_variant 1.0
mmpL5 776182 p.Asp767Asn missense_variant 1.0
mmpL5 777170 c.1311T>C synonymous_variant 0.18
mmpL5 777176 p.Glu435Asp missense_variant 0.17
mmpL5 777200 c.1281C>G synonymous_variant 0.19
mmpL5 777203 c.1278G>C synonymous_variant 0.19
mmpL5 777206 c.1275A>G synonymous_variant 0.19
mmpL5 777212 c.1269C>G synonymous_variant 0.2
mmpL5 777215 c.1266C>G synonymous_variant 0.23
mmpL5 777218 c.1263G>A synonymous_variant 0.25
mmpS5 779615 c.-710C>G upstream_gene_variant 1.0
rpsL 781395 c.-165T>C upstream_gene_variant 1.0
rpsL 781571 c.12C>T synonymous_variant 0.33
rpsL 781595 c.36T>C synonymous_variant 0.33
rpsL 781598 c.39G>C synonymous_variant 0.29
rpsL 781605 p.Ile16Val missense_variant 0.25
rpsL 781608 p.Ser17Ala missense_variant 0.25
rpsL 781628 c.69T>C synonymous_variant 0.27
rpsL 781649 c.90T>C synonymous_variant 0.25
rpsL 781655 c.96T>C synonymous_variant 0.2
rpsL 781682 c.123T>C synonymous_variant 0.22
rpsL 781718 c.159C>T synonymous_variant 0.29
rpsL 781728 c.169T>C synonymous_variant 0.3
rpsL 781736 c.177T>C synonymous_variant 0.42
rpsL 781742 c.183C>T synonymous_variant 0.38
rpsL 781751 c.192G>C synonymous_variant 0.35
rpsL 781754 c.195G>C synonymous_variant 0.37
rpsL 781808 c.249C>T synonymous_variant 0.47
rpsL 781814 c.255C>T synonymous_variant 0.47
rpsL 781817 c.258G>T synonymous_variant 0.42
rpsL 781832 c.273T>C synonymous_variant 0.37
rpsL 781838 c.279G>C synonymous_variant 0.38
rpsL 781841 c.282C>G synonymous_variant 0.4
rpsL 781865 c.306G>C synonymous_variant 0.23
rpsL 781868 c.309T>C synonymous_variant 0.18
rpsL 781871 c.312G>C synonymous_variant 0.19
rpsL 781892 c.333A>G synonymous_variant 0.23
rpsL 781898 c.339A>T synonymous_variant 0.32
rpsL 781916 c.357T>C synonymous_variant 0.28
rpsL 781929 p.Gly124Ser missense_variant 0.29
rplC 800612 c.-197A>G upstream_gene_variant 0.38
rplC 800654 c.-155T>C upstream_gene_variant 0.33
rplC 800693 c.-116A>G upstream_gene_variant 0.3
rplC 800703 c.-106_-104delTTGinsCTC upstream_gene_variant 0.23
rplC 800715 c.-94A>C upstream_gene_variant 0.18
rplC 800720 c.-89T>C upstream_gene_variant 0.17
rplC 800738 c.-71T>C upstream_gene_variant 0.16
rplC 801195 c.387G>C synonymous_variant 0.15
rplC 801222 c.414T>C synonymous_variant 0.2
rplC 801249 c.441T>C synonymous_variant 0.15
rplC 801255 c.447C>T synonymous_variant 0.14
rplC 801348 c.540T>G synonymous_variant 0.21
rplC 801357 c.549T>C synonymous_variant 0.23
rplC 801367 p.Ala187Thr missense_variant 0.15
fbiC 1303492 c.562T>C synonymous_variant 0.14
fbiC 1303534 p.Ser202Ala missense_variant 0.17
fbiC 1303575 c.645G>C synonymous_variant 0.19
fbiC 1303581 c.651G>C synonymous_variant 0.18
fbiC 1303590 c.660A>T synonymous_variant 0.2
fbiC 1303602 c.672A>G synonymous_variant 0.17
fbiC 1303605 c.675C>G synonymous_variant 0.17
fbiC 1303608 c.678G>A synonymous_variant 0.17
fbiC 1303614 c.684C>T synonymous_variant 0.17
fbiC 1303632 c.702T>G synonymous_variant 0.2
fbiC 1303647 c.717G>C synonymous_variant 0.33
fbiC 1303650 c.720G>T synonymous_variant 0.3
fbiC 1303653 c.723G>C synonymous_variant 0.22
fbiC 1303659 c.729T>C synonymous_variant 0.22
fbiC 1303661 p.Val244Ala missense_variant 0.22
fbiC 1303674 c.744C>G synonymous_variant 0.29
fbiC 1303686 c.756C>G synonymous_variant 0.27
fbiC 1303695 c.765T>C synonymous_variant 0.3
fbiC 1303704 c.774T>C synonymous_variant 0.22
fbiC 1303708 c.778T>C synonymous_variant 0.22
fbiC 1303737 c.807G>A synonymous_variant 0.38
fbiC 1303746 c.816T>C synonymous_variant 0.38
fbiC 1303749 c.819G>C synonymous_variant 0.38
fbiC 1303752 c.822A>G synonymous_variant 0.33
fbiC 1303755 c.825T>C synonymous_variant 0.3
fbiC 1303785 c.855G>T synonymous_variant 0.47
fbiC 1303788 c.858T>C synonymous_variant 0.47
fbiC 1303789 p.Ile287Val missense_variant 0.44
fbiC 1303794 c.864A>G synonymous_variant 0.44
fbiC 1303818 c.888C>G synonymous_variant 0.42
fbiC 1303846 p.Phe306Val missense_variant 0.41
fbiC 1303854 c.924T>C synonymous_variant 0.38
fbiC 1303860 c.930A>C synonymous_variant 0.35
fbiC 1303884 c.954T>G synonymous_variant 0.23
fbiC 1303890 c.960G>C synonymous_variant 0.17
fbiC 1303897 c.967C>T synonymous_variant 0.31
fbiC 1303905 c.975G>C synonymous_variant 0.31
fbiC 1303908 c.978C>A synonymous_variant 0.33
fbiC 1303914 c.984C>G synonymous_variant 0.31
fbiC 1303923 c.993C>T synonymous_variant 0.31
fbiC 1303932 c.1002G>C synonymous_variant 0.31
fbiC 1303935 c.1005G>C synonymous_variant 0.31
fbiC 1303947 c.1017T>G synonymous_variant 0.29
fbiC 1303948 p.Gly340Arg missense_variant 0.31
fbiC 1303956 c.1026A>G synonymous_variant 0.33
fbiC 1303961 p.Arg344Leu missense_variant 0.36
fbiC 1303969 p.Val347Ile missense_variant 0.21
fbiC 1303980 c.1050G>A synonymous_variant 0.15
fbiC 1303986 c.1056C>T synonymous_variant 0.17
fbiC 1304499 c.1569T>G synonymous_variant 0.3
fbiC 1304520 c.1590A>C synonymous_variant 0.3
fbiC 1304523 c.1593G>T synonymous_variant 0.27
fbiC 1304526 c.1596T>A synonymous_variant 0.3
fbiC 1304530 p.Ser534Thr missense_variant 0.3
fbiC 1304533 c.1603T>C synonymous_variant 0.33
fbiC 1304544 p.Asp538Glu missense_variant 0.42
fbiC 1304545 p.Val539Thr missense_variant 0.42
fbiC 1304559 p.Glu543Asp missense_variant 0.57
fbiC 1304568 c.1638T>C synonymous_variant 0.47
fbiC 1304574 c.1644C>G synonymous_variant 0.5
fbiC 1304580 c.1650T>C synonymous_variant 0.5
fbiC 1304613 c.1683T>G synonymous_variant 0.47
fbiC 1304625 c.1695C>T synonymous_variant 0.46
fbiC 1304634 c.1704C>G synonymous_variant 0.42
fbiC 1304640 c.1710A>C synonymous_variant 0.29
fbiC 1304646 c.1716T>C synonymous_variant 0.23
fbiC 1304742 c.1812T>C synonymous_variant 0.33
fbiC 1304748 c.1818T>C synonymous_variant 0.41
fbiC 1304757 c.1827A>G synonymous_variant 0.38
fbiC 1304778 c.1848T>C synonymous_variant 0.45
fbiC 1304784 c.1854T>C synonymous_variant 0.44
fbiC 1304787 c.1857T>G synonymous_variant 0.47
fbiC 1304790 c.1860C>G synonymous_variant 0.44
fbiC 1304796 c.1866G>A synonymous_variant 0.42
fbiC 1304808 c.1878C>G synonymous_variant 0.48
fbiC 1304811 c.1881C>G synonymous_variant 0.45
fbiC 1304817 c.1887T>C synonymous_variant 0.45
fbiC 1304856 c.1926C>G synonymous_variant 0.35
fbiC 1304869 c.1939C>T synonymous_variant 0.28
fbiC 1304880 c.1950C>T synonymous_variant 0.22
fbiC 1304893 p.Gly655Ser missense_variant 0.26
fbiC 1304907 c.1977C>G synonymous_variant 0.17
fbiC 1304910 c.1980G>C synonymous_variant 0.18
fbiC 1304916 c.1986T>C synonymous_variant 0.17
fbiC 1304925 c.1995G>C synonymous_variant 0.19
fbiC 1304928 c.1998T>C synonymous_variant 0.2
fbiC 1304940 c.2010A>G synonymous_variant 0.2
fbiC 1304955 c.2025G>A synonymous_variant 0.25
fbiC 1304958 c.2028T>G synonymous_variant 0.25
fbiC 1304994 c.2064A>G synonymous_variant 0.18
fbiC 1304995 c.2065T>C synonymous_variant 0.18
fbiC 1305012 c.2082G>C synonymous_variant 0.16
fbiC 1305014 p.Thr695Ser missense_variant 0.17
fbiC 1305021 c.2091C>A synonymous_variant 0.18
fbiC 1305033 c.2103T>G synonymous_variant 0.18
fbiC 1305039 c.2109G>C synonymous_variant 0.18
fbiC 1305042 c.2112A>G synonymous_variant 0.19
fbiC 1305045 c.2115A>G synonymous_variant 0.18
fbiC 1305066 c.2136T>C synonymous_variant 0.19
fbiC 1305069 c.2139G>C synonymous_variant 0.18
fbiC 1305075 c.2145T>C synonymous_variant 0.18
fbiC 1305078 c.2148A>G synonymous_variant 0.19
fbiC 1305090 c.2160C>G synonymous_variant 0.21
fbiC 1305092 p.Ala721Gly missense_variant 0.15
fbiC 1305096 c.2166T>C synonymous_variant 0.18
fbiC 1305099 c.2169T>C synonymous_variant 0.18
fbiC 1305114 c.2184T>C synonymous_variant 0.17
fbiC 1305117 c.2187T>C synonymous_variant 0.18
fbiC 1305126 c.2196T>C synonymous_variant 0.17
Rv1258c 1406760 c.580_581insC frameshift_variant 1.0
atpE 1460852 c.-193C>G upstream_gene_variant 0.47
atpE 1460855 c.-190T>C upstream_gene_variant 0.5
atpE 1460858 c.-187C>G upstream_gene_variant 0.43
atpE 1460861 c.-184C>G upstream_gene_variant 0.4
atpE 1460879 c.-166C>G upstream_gene_variant 0.29
atpE 1460882 c.-163T>C upstream_gene_variant 0.31
atpE 1461149 c.105T>G synonymous_variant 0.25
atpE 1461150 p.Ile36Val missense_variant 0.25
atpE 1461158 c.114T>C synonymous_variant 0.22
atpE 1461159 p.Val39Ile missense_variant 0.36
atpE 1461170 c.126A>G synonymous_variant 0.29
atpE 1461185 c.141G>C synonymous_variant 0.27
atpE 1461189 c.145C>T synonymous_variant 0.29
atpE 1461194 c.150C>T synonymous_variant 0.31
atpE 1461197 c.153A>G synonymous_variant 0.29
atpE 1461219 c.175T>C synonymous_variant 0.38
atpE 1461233 c.189A>C synonymous_variant 0.33
atpE 1461251 c.207G>C synonymous_variant 0.19
atpE 1461254 c.210T>C synonymous_variant 0.17
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1471923 n.78T>C non_coding_transcript_exon_variant 0.41
rrs 1471934 n.89A>G non_coding_transcript_exon_variant 0.5
rrs 1471969 n.124T>C non_coding_transcript_exon_variant 0.39
rrs 1471970 n.125G>A non_coding_transcript_exon_variant 0.39
rrs 1472028 n.183A>T non_coding_transcript_exon_variant 0.38
rrs 1472029 n.184C>T non_coding_transcript_exon_variant 0.38
rrs 1472030 n.185G>T non_coding_transcript_exon_variant 0.43
rrs 1472031 n.186G>A non_coding_transcript_exon_variant 0.43
rrs 1472034 n.189T>C non_coding_transcript_exon_variant 0.43
rrs 1472044 n.199G>T non_coding_transcript_exon_variant 0.44
rrs 1472053 n.211_212delGC non_coding_transcript_exon_variant 0.47
rrs 1472061 n.216A>T non_coding_transcript_exon_variant 0.42
rrs 1472075 n.230A>G non_coding_transcript_exon_variant 0.45
rrs 1472108 n.263C>T non_coding_transcript_exon_variant 0.46
rrs 1472969 n.1124A>G non_coding_transcript_exon_variant 0.62
rrs 1472970 n.1125C>G non_coding_transcript_exon_variant 0.59
rrs 1472977 n.1132G>C non_coding_transcript_exon_variant 0.55
rrs 1472978 n.1133T>C non_coding_transcript_exon_variant 0.59
rrs 1473104 n.1259C>T non_coding_transcript_exon_variant 0.44
rrs 1473105 n.1260G>A non_coding_transcript_exon_variant 0.42
rrs 1473145 n.1300C>T non_coding_transcript_exon_variant 0.39
rrs 1473166 n.1321G>A non_coding_transcript_exon_variant 0.43
rrs 1473288 n.1443C>T non_coding_transcript_exon_variant 0.48
rrs 1473290 n.1445C>T non_coding_transcript_exon_variant 0.45
rrs 1473291 n.1446G>T non_coding_transcript_exon_variant 0.45
rrl 1473668 n.11C>T non_coding_transcript_exon_variant 0.23
rrl 1473756 n.99G>A non_coding_transcript_exon_variant 0.54
rrl 1473758 n.101G>T non_coding_transcript_exon_variant 0.54
rrl 1473806 n.149C>T non_coding_transcript_exon_variant 0.53
rrl 1473813 n.156C>T non_coding_transcript_exon_variant 0.5
rrl 1473839 n.182G>T non_coding_transcript_exon_variant 0.4
rrl 1473877 n.220G>A non_coding_transcript_exon_variant 0.41
rrl 1473898 n.241C>T non_coding_transcript_exon_variant 0.38
rrl 1473899 n.242A>C non_coding_transcript_exon_variant 0.36
rrl 1473936 n.279A>G non_coding_transcript_exon_variant 0.47
rrl 1473943 n.286G>T non_coding_transcript_exon_variant 0.47
rrl 1473944 n.287G>A non_coding_transcript_exon_variant 0.47
rrl 1473966 n.309T>C non_coding_transcript_exon_variant 0.5
rrl 1473971 n.314G>T non_coding_transcript_exon_variant 0.5
rrl 1473995 n.338G>T non_coding_transcript_exon_variant 0.64
rrl 1474001 n.344C>T non_coding_transcript_exon_variant 0.62
rrl 1474009 n.352A>G non_coding_transcript_exon_variant 0.58
rrl 1474012 n.355C>T non_coding_transcript_exon_variant 0.58
rrl 1474036 n.379G>A non_coding_transcript_exon_variant 0.6
rrl 1474054 n.397T>C non_coding_transcript_exon_variant 0.52
rrl 1474093 n.436G>T non_coding_transcript_exon_variant 0.33
rrl 1474099 n.442G>A non_coding_transcript_exon_variant 0.3
rrl 1474103 n.446A>T non_coding_transcript_exon_variant 0.3
rrl 1474111 n.454T>C non_coding_transcript_exon_variant 0.33
rrl 1474140 n.483C>T non_coding_transcript_exon_variant 0.35
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 0.34
rrl 1474181 n.524C>T non_coding_transcript_exon_variant 0.42
rrl 1474249 n.592G>T non_coding_transcript_exon_variant 0.36
rrl 1474282 n.625G>A non_coding_transcript_exon_variant 0.29
rrl 1474288 n.632_634delCTT non_coding_transcript_exon_variant 0.29
rrl 1474294 n.638_649delCTCTCCGGAGGA non_coding_transcript_exon_variant 0.29
rrl 1474308 n.651G>T non_coding_transcript_exon_variant 0.2
rrl 1474310 n.653T>G non_coding_transcript_exon_variant 0.2
rrl 1474639 n.982G>A non_coding_transcript_exon_variant 0.55
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 0.46
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 0.48
rrl 1474823 n.1166C>T non_coding_transcript_exon_variant 0.48
rrl 1474831 n.1174A>G non_coding_transcript_exon_variant 0.48
rrl 1474904 n.1247G>A non_coding_transcript_exon_variant 0.39
rrl 1474956 n.1299C>T non_coding_transcript_exon_variant 0.28
rrl 1474960 n.1303C>G non_coding_transcript_exon_variant 0.24
rrl 1474963 n.1306G>T non_coding_transcript_exon_variant 0.22
rrl 1474964 n.1307T>A non_coding_transcript_exon_variant 0.22
rrl 1474965 n.1308G>C non_coding_transcript_exon_variant 0.22
rrl 1474970 n.1313G>A non_coding_transcript_exon_variant 0.26
rrl 1475006 n.1349A>T non_coding_transcript_exon_variant 0.26
rrl 1475013 n.1356G>A non_coding_transcript_exon_variant 0.18
rrl 1475028 n.1371G>A non_coding_transcript_exon_variant 0.25
rrl 1475061 n.1404C>T non_coding_transcript_exon_variant 0.24
rrl 1475088 n.1431A>T non_coding_transcript_exon_variant 0.41
rrl 1475199 n.1542G>A non_coding_transcript_exon_variant 0.48
rrl 1475201 n.1544G>A non_coding_transcript_exon_variant 0.48
rrl 1475206 n.1549C>T non_coding_transcript_exon_variant 0.55
rrl 1475209 n.1552G>C non_coding_transcript_exon_variant 0.59
rrl 1475213 n.1556C>T non_coding_transcript_exon_variant 0.54
rrl 1475249 n.1592T>C non_coding_transcript_exon_variant 0.55
rrl 1475252 n.1595C>T non_coding_transcript_exon_variant 0.57
rrl 1475266 n.1609T>C non_coding_transcript_exon_variant 0.54
rrl 1475267 n.1610G>A non_coding_transcript_exon_variant 0.52
rrl 1475291 n.1634A>C non_coding_transcript_exon_variant 0.46
rrl 1475315 n.1658A>T non_coding_transcript_exon_variant 0.46
rrl 1475355 n.1698C>T non_coding_transcript_exon_variant 0.27
rrl 1475369 n.1712G>C non_coding_transcript_exon_variant 0.31
rrl 1475402 n.1745C>T non_coding_transcript_exon_variant 0.48
rrl 1475409 n.1752T>C non_coding_transcript_exon_variant 0.47
rrl 1475419 n.1762C>T non_coding_transcript_exon_variant 0.47
rrl 1475429 n.1772G>A non_coding_transcript_exon_variant 0.48
rrl 1475483 n.1826C>T non_coding_transcript_exon_variant 0.41
rrl 1475505 n.1848G>A non_coding_transcript_exon_variant 0.38
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 0.36
rrl 1475599 n.1942A>G non_coding_transcript_exon_variant 0.44
rrl 1475608 n.1951T>C non_coding_transcript_exon_variant 0.43
rrl 1475638 n.1981C>T non_coding_transcript_exon_variant 0.5
rrl 1475642 n.1985T>C non_coding_transcript_exon_variant 0.54
rrl 1475657 n.2000A>G non_coding_transcript_exon_variant 0.55
rrl 1475659 n.2002G>T non_coding_transcript_exon_variant 0.55
rrl 1475765 n.2111delG non_coding_transcript_exon_variant 0.22
rrl 1475881 n.2224T>C non_coding_transcript_exon_variant 0.41
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.37
rrl 1476025 n.2368G>T non_coding_transcript_exon_variant 0.2
rrl 1476045 n.2388G>T non_coding_transcript_exon_variant 0.18
rrl 1476047 n.2390G>T non_coding_transcript_exon_variant 0.17
rrl 1476048 n.2391G>A non_coding_transcript_exon_variant 0.17
rrl 1476049 n.2392C>T non_coding_transcript_exon_variant 0.18
rrl 1476086 n.2429G>A non_coding_transcript_exon_variant 0.3
rrl 1476089 n.2432T>C non_coding_transcript_exon_variant 0.32
rrl 1476095 n.2438C>G non_coding_transcript_exon_variant 0.35
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 0.47
rrl 1476117 n.2460G>C non_coding_transcript_exon_variant 0.44
rrl 1476214 n.2557G>T non_coding_transcript_exon_variant 0.41
rrl 1476215 n.2558C>T non_coding_transcript_exon_variant 0.41
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.44
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 0.63
rrl 1476297 n.2640C>T non_coding_transcript_exon_variant 0.45
rrl 1476299 n.2642C>T non_coding_transcript_exon_variant 0.47
rrl 1476583 n.2926G>A non_coding_transcript_exon_variant 0.34
rrl 1476584 n.2927C>T non_coding_transcript_exon_variant 0.34
rrl 1476597 n.2940G>A non_coding_transcript_exon_variant 0.34
rrl 1476608 n.2951C>G non_coding_transcript_exon_variant 0.27
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 0.39
rrl 1476689 n.3032A>T non_coding_transcript_exon_variant 0.42
rrl 1476690 n.3033C>T non_coding_transcript_exon_variant 0.42
rrl 1476693 n.3036G>A non_coding_transcript_exon_variant 0.42
rrl 1476695 n.3038T>A non_coding_transcript_exon_variant 0.42
rrl 1476716 n.3059A>C non_coding_transcript_exon_variant 0.36
rrl 1476717 n.3060C>T non_coding_transcript_exon_variant 0.36
rrl 1476726 n.3069A>G non_coding_transcript_exon_variant 0.39
rrl 1476732 n.3075T>C non_coding_transcript_exon_variant 0.39
rrl 1476746 n.3089T>C non_coding_transcript_exon_variant 0.32
rrl 1476759 n.3102T>C non_coding_transcript_exon_variant 0.24
rrl 1476770 n.3113T>C non_coding_transcript_exon_variant 0.17
fabG1 1673710 p.Leu91Ile missense_variant 0.2
fabG1 1673716 p.Ala93Lys missense_variant 0.2
fabG1 1673733 p.Met98Ile missense_variant 0.22
inhA 1673748 c.-454A>G upstream_gene_variant 0.18
fabG1 1673749 p.Lys104Arg missense_variant 0.18
fabG1 1673758 p.Lys107Gln missense_variant 0.17
inhA 1674024 c.-178T>C upstream_gene_variant 0.27
fabG1 1674037 p.Gln200Ala missense_variant 0.36
fabG1 1674049 p.Gln204Asp missense_variant 0.27
inhA 1674054 c.-148T>C upstream_gene_variant 0.27
inhA 1674060 c.-142A>C upstream_gene_variant 0.31
inhA 1674078 c.-124C>G upstream_gene_variant 0.37
fabG1 1674079 p.Pro214Ala missense_variant 0.39
inhA 1674084 c.-118C>G upstream_gene_variant 0.44
inhA 1674114 c.-88T>G upstream_gene_variant 0.22
inhA 1674123 c.-79T>C upstream_gene_variant 0.19
inhA 1674129 c.-73C>T upstream_gene_variant 0.19
inhA 1674132 c.-70T>C upstream_gene_variant 0.19
fabG1 1674136 p.Ser233Ala missense_variant 0.16
inhA 1674141 c.-61T>C upstream_gene_variant 0.16
inhA 1674561 c.360C>T synonymous_variant 0.14
inhA 1674582 c.381T>C synonymous_variant 0.17
inhA 1674585 c.384T>C synonymous_variant 0.17
inhA 1674589 p.Met130Leu missense_variant 0.28
inhA 1674601 p.Leu134Thr missense_variant 0.26
inhA 1674624 c.423A>T synonymous_variant 0.32
inhA 1674627 c.426T>C synonymous_variant 0.3
inhA 1674636 c.435C>G synonymous_variant 0.35
inhA 1674690 c.489C>G synonymous_variant 0.26
inhA 1674703 c.502T>C synonymous_variant 0.26
inhA 1674708 c.507G>A synonymous_variant 0.22
inhA 1674714 c.513C>G synonymous_variant 0.16
inhA 1674718 c.517A>C synonymous_variant 0.15
inhA 1674729 c.528G>T synonymous_variant 0.15
inhA 1674738 c.537C>G synonymous_variant 0.17
inhA 1674746 p.Tyr182Phe missense_variant 0.18
inhA 1674756 c.555T>A synonymous_variant 0.14
inhA 1674786 c.585G>A synonymous_variant 0.21
inhA 1674789 c.588G>C synonymous_variant 0.2
inhA 1674795 c.594G>C synonymous_variant 0.2
inhA 1674801 c.600T>C synonymous_variant 0.2
inhA 1674804 c.603G>C synonymous_variant 0.19
inhA 1674840 c.639C>G synonymous_variant 0.27
inhA 1674846 p.Ile215Met missense_variant 0.27
inhA 1674858 c.657G>A synonymous_variant 0.21
inhA 1674870 c.669T>C synonymous_variant 0.26
inhA 1674879 c.678T>C synonymous_variant 0.28
inhA 1674903 c.702T>C synonymous_variant 0.19
inhA 1674904 p.Ala235Pro missense_variant 0.2
inhA 1674934 c.733C>T synonymous_variant 0.27
inhA 1674939 c.738G>C synonymous_variant 0.25
inhA 1674942 c.741T>G synonymous_variant 0.23
inhA 1674954 c.753G>T synonymous_variant 0.14
inhA 1674960 c.759C>G synonymous_variant 0.17
rpsA 1833517 c.-24delC upstream_gene_variant 0.23
rpsA 1833554 p.Thr5Ala missense_variant 0.29
rpsA 1833589 c.48A>T synonymous_variant 0.33
rpsA 1833595 c.54T>G synonymous_variant 0.26
rpsA 1833667 c.126C>G synonymous_variant 0.52
rpsA 1833703 c.162C>T synonymous_variant 0.45
rpsA 1833724 c.183C>G synonymous_variant 0.56
rpsA 1833727 c.186G>C synonymous_variant 0.56
rpsA 1833742 c.201A>G synonymous_variant 0.56
rpsA 1833745 c.204G>C synonymous_variant 0.56
rpsA 1833760 c.219C>T synonymous_variant 0.53
rpsA 1833793 c.252C>T synonymous_variant 0.39
rpsA 1833811 c.270G>C synonymous_variant 0.39
rpsA 1833835 c.294C>T synonymous_variant 0.26
rpsA 1833838 c.297G>C synonymous_variant 0.3
rpsA 1833841 c.300C>G synonymous_variant 0.33
rpsA 1833847 c.306C>G synonymous_variant 0.36
rpsA 1833856 c.315A>G synonymous_variant 0.38
rpsA 1833874 c.333T>C synonymous_variant 0.48
rpsA 1833928 c.387G>C synonymous_variant 0.5
rpsA 1833971 c.430C>T synonymous_variant 0.32
rpsA 1833979 c.438T>C synonymous_variant 0.36
rpsA 1834000 c.459G>C synonymous_variant 0.36
rpsA 1834021 c.480C>T synonymous_variant 0.32
rpsA 1834030 c.489C>G synonymous_variant 0.32
rpsA 1834097 c.556_557delTCinsAG synonymous_variant 0.23
rpsA 1834102 c.561T>G synonymous_variant 0.23
rpsA 1834177 c.636A>C synonymous_variant 0.94
rpsA 1834222 c.681T>C synonymous_variant 0.32
rpsA 1834240 c.699T>C synonymous_variant 0.33
rpsA 1834249 c.708T>C synonymous_variant 0.32
rpsA 1834261 c.720A>G synonymous_variant 0.38
rpsA 1834264 c.723G>C synonymous_variant 0.38
rpsA 1834294 c.753G>T synonymous_variant 0.35
rpsA 1834297 c.756C>T synonymous_variant 0.35
rpsA 1834303 c.762T>C synonymous_variant 0.34
rpsA 1834306 c.765T>C synonymous_variant 0.36
rpsA 1834348 c.807T>C synonymous_variant 0.48
rpsA 1834366 c.825A>G synonymous_variant 0.38
rpsA 1834369 c.828C>G synonymous_variant 0.35
rpsA 1834396 c.855G>C synonymous_variant 0.43
rpsA 1834411 c.870T>C synonymous_variant 0.43
rpsA 1834417 c.876G>C synonymous_variant 0.35
rpsA 1834423 c.882G>C synonymous_variant 0.35
rpsA 1834435 c.894G>C synonymous_variant 0.36
rpsA 1834451 c.910T>C synonymous_variant 0.33
rpsA 1834468 c.927A>G synonymous_variant 0.27
rpsA 1834474 c.933C>G synonymous_variant 0.25
rpsA 1834477 c.936C>T synonymous_variant 0.27
rpsA 1834489 c.948T>C synonymous_variant 0.35
rpsA 1834513 c.972C>G synonymous_variant 0.26
rpsA 1834528 c.987T>C synonymous_variant 0.35
rpsA 1834540 c.999G>T synonymous_variant 0.35
rpsA 1834546 c.1005T>C synonymous_variant 0.31
rpsA 1834555 c.1014T>C synonymous_variant 0.42
rpsA 1834606 c.1065C>T synonymous_variant 0.4
rpsA 1834609 c.1068T>C synonymous_variant 0.45
rpsA 1834633 c.1092A>G synonymous_variant 0.35
rpsA 1834639 c.1098T>C synonymous_variant 0.36
rpsA 1834654 p.Glu371Asp missense_variant 0.38
rpsA 1834690 c.1149T>C synonymous_variant 0.4
rpsA 1834732 c.1191T>C synonymous_variant 0.46
rpsA 1834738 c.1197A>G synonymous_variant 0.52
rpsA 1834753 c.1212T>C synonymous_variant 0.46
rpsA 1834759 c.1218A>C synonymous_variant 0.39
rpsA 1834765 p.Glu408Asp missense_variant 0.41
rpsA 1834775 p.Ala412Asn missense_variant 0.3
rpsA 1834780 c.1239A>G synonymous_variant 0.27
rpsA 1834789 c.1248T>C synonymous_variant 0.27
rpsA 1834792 c.1251G>C synonymous_variant 0.29
rpsA 1834828 c.1287C>G synonymous_variant 0.18
tlyA 1917972 c.33A>G synonymous_variant 1.0
ndh 2102233 c.810G>A synonymous_variant 0.14
ndh 2102260 c.783C>T synonymous_variant 0.23
ndh 2102266 c.777C>G synonymous_variant 0.21
ndh 2102317 c.726A>G synonymous_variant 0.3
ndh 2102638 c.405A>G synonymous_variant 0.25
ndh 2102644 c.399A>G synonymous_variant 0.27
ndh 2102671 c.372T>G synonymous_variant 0.3
ndh 2102680 c.363T>G synonymous_variant 0.3
ndh 2102683 c.360T>C synonymous_variant 0.3
ndh 2102686 c.357G>C synonymous_variant 0.27
ndh 2102694 p.Val117Ile missense_variant 0.29
ndh 2102701 c.342C>T synonymous_variant 0.29
ndh 2102710 c.333C>T synonymous_variant 0.25
ndh 2102716 p.Gln109Asp missense_variant 0.19
katG 2154724 p.Arg463Leu missense_variant 1.0
katG 2155029 c.1083C>G synonymous_variant 0.19
katG 2155032 c.1080T>G synonymous_variant 0.18
katG 2155080 c.1032G>C synonymous_variant 0.15
katG 2155098 c.1014C>G synonymous_variant 0.17
katG 2155581 c.531C>A synonymous_variant 0.2
katG 2155590 c.522A>G synonymous_variant 0.17
katG 2155596 c.516G>C synonymous_variant 0.15
katG 2155605 c.507C>T synonymous_variant 0.17
katG 2155616 p.Val166Ile missense_variant 0.15
katG 2155617 c.495T>C synonymous_variant 0.15
katG 2155620 c.492G>C synonymous_variant 0.15
katG 2155632 c.480A>C synonymous_variant 0.29
katG 2155637 p.Leu159Ile missense_variant 0.25
katG 2155641 p.Lys157Asn missense_variant 0.25
katG 2155680 c.432G>C synonymous_variant 0.47
katG 2155691 c.421T>C synonymous_variant 0.47
katG 2155692 c.420C>T synonymous_variant 0.47
katG 2155695 p.Ala139Val missense_variant 0.5
katG 2155704 c.408C>G synonymous_variant 0.5
katG 2155716 c.396T>C synonymous_variant 0.58
katG 2155722 c.390G>C synonymous_variant 0.56
katG 2155728 c.384G>C synonymous_variant 0.5
katG 2155740 p.Gly124Gln missense_variant 0.29
katG 2155743 c.369G>C synonymous_variant 0.25
katG 2155747 p.Ala122Gly missense_variant 0.25
PPE35 2167926 p.Leu896Ser missense_variant 1.0
PPE35 2169320 p.Leu431Phe missense_variant 0.33
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0
kasA 2517917 c.-198G>T upstream_gene_variant 0.5
kasA 2517926 c.-189G>A upstream_gene_variant 0.47
kasA 2517950 c.-165C>T upstream_gene_variant 0.55
kasA 2517965 c.-150C>T upstream_gene_variant 0.48
kasA 2517974 c.-141T>C upstream_gene_variant 0.47
kasA 2517989 c.-126T>C upstream_gene_variant 0.33
kasA 2517993 c.-122G>T upstream_gene_variant 0.27
kasA 2518019 c.-96A>G upstream_gene_variant 0.17
kasA 2518132 c.18C>T synonymous_variant 0.14
kasA 2518146 p.Phe11Tyr missense_variant 0.18
kasA 2518152 p.Ser13Asn missense_variant 0.17
kasA 2518162 c.48G>A synonymous_variant 0.17
kasA 2518168 c.54C>T synonymous_variant 0.16
kasA 2518183 c.69G>A synonymous_variant 0.23
kasA 2518190 p.Ser26Ala missense_variant 0.26
kasA 2518220 c.106C>T synonymous_variant 0.22
kasA 2518234 c.120G>A synonymous_variant 0.19
kasA 2518248 p.Ala45Val missense_variant 0.2
kasA 2518480 c.366T>C synonymous_variant 0.29
kasA 2518483 c.369C>T synonymous_variant 0.29
kasA 2518488 p.Ser125Thr missense_variant 0.29
kasA 2518504 c.390T>C synonymous_variant 0.25
kasA 2518506 p.Ala131Glu missense_variant 0.25
kasA 2518519 c.405G>C synonymous_variant 0.33
kasA 2518528 c.414C>G synonymous_variant 0.25
kasA 2518534 c.420G>C synonymous_variant 0.3
kasA 2518561 c.447T>C synonymous_variant 0.15
kasA 2518591 c.477G>T synonymous_variant 0.19
kasA 2518597 c.483C>G synonymous_variant 0.2
kasA 2518606 c.492G>C synonymous_variant 0.25
kasA 2518609 p.Met165Ile missense_variant 0.25
kasA 2518621 c.507G>T synonymous_variant 0.31
kasA 2518627 c.513T>C synonymous_variant 0.31
kasA 2518636 c.522C>T synonymous_variant 0.29
kasA 2518642 c.528A>G synonymous_variant 0.33
kasA 2518672 c.558G>C synonymous_variant 0.45
kasA 2518678 c.564C>T synonymous_variant 0.45
kasA 2518684 c.570C>G synonymous_variant 0.45
kasA 2518688 p.Val192Phe missense_variant 0.4
kasA 2518696 c.582C>T synonymous_variant 0.36
kasA 2518702 c.588C>T synonymous_variant 0.44
kasA 2518705 c.591T>G synonymous_variant 0.44
kasA 2518711 c.597A>G synonymous_variant 0.44
kasA 2518714 c.600A>T synonymous_variant 0.44
kasA 2518723 c.609G>A synonymous_variant 0.5
kasA 2518747 c.633C>G synonymous_variant 0.4
kasA 2518768 c.654C>G synonymous_variant 0.33
kasA 2518777 c.663C>T synonymous_variant 0.29
kasA 2518789 c.675G>C synonymous_variant 0.29
ahpC 2726258 c.66C>T synonymous_variant 0.16
ahpC 2726285 c.93C>T synonymous_variant 0.18
ahpC 2726288 c.96C>G synonymous_variant 0.19
ahpC 2726303 c.111T>C synonymous_variant 0.18
ahpC 2726311 p.Ser40Asn missense_variant 0.18
ahpC 2726315 p.Asp41Glu missense_variant 0.18
ahpC 2726318 p.Glu42Asp missense_variant 0.18
ahpC 2726322 p.Pro44Ala missense_variant 0.19
ahpC 2726336 c.144G>C synonymous_variant 0.19
ahpC 2726348 c.156T>C synonymous_variant 0.3
ahpC 2726576 c.384C>T synonymous_variant 0.2
ahpC 2726579 c.387T>C synonymous_variant 0.2
ahpC 2726582 c.390G>C synonymous_variant 0.2
ahpC 2726591 c.399C>G synonymous_variant 0.17
ahpC 2726606 c.414C>G synonymous_variant 0.25
ahpC 2726612 c.420C>G synonymous_variant 0.29
ahpC 2726633 c.441C>G synonymous_variant 0.36
ahpC 2726638 p.Ala149Val missense_variant 0.29
ahpC 2726645 c.453C>G synonymous_variant 0.28
ahpC 2726651 c.459G>C synonymous_variant 0.28
ahpC 2726657 c.465A>C synonymous_variant 0.26
ahpC 2726669 p.Asp159Glu missense_variant 0.24
ahpC 2726675 c.483A>G synonymous_variant 0.22
ahpC 2726681 c.489A>C synonymous_variant 0.22
ahpC 2726684 c.492G>C synonymous_variant 0.21
ahpC 2726687 c.495C>G synonymous_variant 0.22
ahpC 2726693 c.501C>A synonymous_variant 0.2
ahpC 2726696 c.504C>G synonymous_variant 0.2
folC 2747086 c.513A>C synonymous_variant 0.18
folC 2747089 c.510G>C synonymous_variant 0.16
folC 2747355 p.Val82Ile missense_variant 0.22
folC 2747359 c.240C>G synonymous_variant 0.26
folC 2747394 p.Ile69Val missense_variant 0.35
folC 2747395 c.204T>C synonymous_variant 0.35
folC 2747407 c.192T>C synonymous_variant 0.4
folC 2747408 c.190_191insGGCCT frameshift_variant 0.4
folC 2747414 c.180_184delCCAAC frameshift_variant 0.4
folC 2747442 c.157T>C synonymous_variant 0.5
folC 2747467 p.Asp44Glu missense_variant 0.27
folC 2747473 p.Arg42Lys missense_variant 0.2
folC 2747491 c.108A>G synonymous_variant 0.22
folC 2747497 c.102C>G synonymous_variant 0.25
folC 2747500 c.99A>G synonymous_variant 0.22
folC 2747503 c.96T>C synonymous_variant 0.2
folC 2747509 c.90T>C synonymous_variant 0.2
Rv2752c 3065490 c.702A>T synonymous_variant 0.14
Rv2752c 3065532 c.660A>G synonymous_variant 0.29
Rv2752c 3065553 c.639A>G synonymous_variant 0.29
Rv2752c 3065562 c.630T>C synonymous_variant 0.2
Rv2752c 3065576 p.Ala206Ser missense_variant 0.15
Rv2752c 3065577 c.615C>T synonymous_variant 0.15
Rv2752c 3065580 c.612G>C synonymous_variant 0.15
Rv2752c 3065583 c.609G>A synonymous_variant 0.17
Rv2752c 3065612 p.Thr194Ala missense_variant 0.17
Rv2752c 3065675 p.Phe173Leu missense_variant 0.2
Rv2752c 3065901 c.291A>C synonymous_variant 0.23
Rv2752c 3065916 c.276T>C synonymous_variant 0.23
Rv2752c 3065919 c.273G>C synonymous_variant 0.23
Rv2752c 3065925 p.Ala89Gly missense_variant 0.2
Rv2752c 3065928 c.264G>C synonymous_variant 0.2
Rv2752c 3065946 p.Gly82Ala missense_variant 0.31
Rv2752c 3065955 c.235_237delTTGinsCTC synonymous_variant 0.33
Rv2752c 3065979 c.213T>C synonymous_variant 0.2
Rv2752c 3065988 p.Glu68Asp missense_variant 0.22
Rv2752c 3066024 c.168T>G synonymous_variant 0.2
Rv2752c 3066050 p.Leu48Met missense_variant 0.17
Rv2752c 3066054 c.138T>G synonymous_variant 0.18
thyX 3067676 c.270C>G synonymous_variant 0.23
thyX 3067679 p.Cys89Leu missense_variant 0.17
thyX 3067693 p.Ile85Val missense_variant 0.2
thyX 3067694 c.252G>C synonymous_variant 0.18
thyX 3067702 p.Ile82Leu missense_variant 0.2
thyX 3067713 p.Val78Ala missense_variant 0.2
thyX 3067718 c.228C>G synonymous_variant 0.17
thyA 3073866 c.606C>G synonymous_variant 0.22
thyA 3073872 p.Ile200Val missense_variant 0.18
thyA 3073898 p.Ala192Ser missense_variant 0.14
thyA 3073917 c.555C>G synonymous_variant 0.23
thyA 3073920 c.550_552delCTCinsTTG synonymous_variant 0.23
thyA 3073925 c.547T>C synonymous_variant 0.23
thyA 3073959 c.513T>C synonymous_variant 0.25
thyA 3073977 c.495A>G synonymous_variant 0.19
thyA 3073989 c.483T>C synonymous_variant 0.17
thyA 3074001 c.471C>G synonymous_variant 0.19
thyA 3074004 c.468T>C synonymous_variant 0.24
thyA 3074010 c.462C>G synonymous_variant 0.32
thyA 3074031 c.441T>C synonymous_variant 0.32
thyA 3074037 c.435C>G synonymous_variant 0.33
thyA 3074056 p.Glu139Pro missense_variant 0.41
thyA 3074061 c.411A>G synonymous_variant 0.37
thyA 3074076 c.396C>G synonymous_variant 0.32
thyA 3074097 c.375C>G synonymous_variant 0.22
thyA 3074100 c.372T>C synonymous_variant 0.22
thyA 3074106 c.366T>C synonymous_variant 0.17
ald 3086788 c.-32T>C upstream_gene_variant 1.0
fprA 3473809 c.-198G>C upstream_gene_variant 0.31
fprA 3473812 c.-195G>A upstream_gene_variant 0.29
fprA 3473821 c.-186C>T upstream_gene_variant 0.36
fprA 3473843 c.-164_-163delCAinsGC upstream_gene_variant 0.31
fprA 3473850 c.-157A>G upstream_gene_variant 0.31
fprA 3473860 c.-147G>A upstream_gene_variant 0.27
fprA 3473996 c.-11_-10insA upstream_gene_variant 1.0
fprA 3474135 c.129G>C synonymous_variant 0.16
fprA 3474138 c.132T>C synonymous_variant 0.16
fprA 3474141 c.135C>G synonymous_variant 0.19
fprA 3474162 c.156G>C synonymous_variant 0.28
fprA 3474171 c.165G>C synonymous_variant 0.3
fprA 3474174 c.168T>C synonymous_variant 0.33
fprA 3474204 c.198A>G synonymous_variant 0.35
fprA 3474210 c.204A>G synonymous_variant 0.31
fprA 3474217 p.Ala71Ser missense_variant 0.2
fprA 3474220 p.Glu72Gln missense_variant 0.18
fprA 3474228 c.222C>G synonymous_variant 0.24
fprA 3475014 p.Asp336Glu missense_variant 0.29
fprA 3475015 p.Gln337Lys missense_variant 0.33
fprA 3475019 p.Ser338Thr missense_variant 0.33
fprA 3475022 p.Gly339Ala missense_variant 0.29
fprA 3475026 c.1020C>G synonymous_variant 0.29
fprA 3475036 p.Val344Ser missense_variant 0.25
fprA 3475047 c.1041A>G synonymous_variant 0.25
fprA 3475048 p.Ile348Val missense_variant 0.25
fprA 3475051 p.Asn349Glu missense_variant 0.25
fprA 3475061 p.Pro352Arg missense_variant 0.3
fprA 3475074 c.1068C>G synonymous_variant 0.27
fprA 3475080 c.1074G>T synonymous_variant 0.25
Rv3236c 3612813 p.Thr102Ala missense_variant 1.0
rpoA 3877553 p.Glu319Gln missense_variant 0.16
rpoA 3877587 c.921A>G synonymous_variant 0.25
rpoA 3877613 p.Ile299Val missense_variant 0.32
rpoA 3877656 c.852T>C synonymous_variant 0.38
rpoA 3877668 c.840A>G synonymous_variant 0.44
rpoA 3877677 p.Ala277Ser missense_variant 0.41
rpoA 3877680 c.828G>C synonymous_variant 0.41
rpoA 3877686 c.822A>G synonymous_variant 0.45
rpoA 3877692 c.816G>C synonymous_variant 0.48
rpoA 3877704 c.804G>C synonymous_variant 0.52
rpoA 3877737 c.771G>C synonymous_variant 0.38
rpoA 3877770 c.738A>G synonymous_variant 0.33
rpoA 3877776 c.732T>C synonymous_variant 0.35
rpoA 3877782 c.726T>C synonymous_variant 0.38
rpoA 3877818 c.690A>G synonymous_variant 0.3
rpoA 3877839 c.669G>C synonymous_variant 0.29
rpoA 3877842 c.666A>G synonymous_variant 0.29
rpoA 3877857 c.651G>A synonymous_variant 0.2
rpoA 3877893 c.615C>T synonymous_variant 0.19
rpoA 3877905 c.603A>G synonymous_variant 0.18
rpoA 3877920 c.588G>C synonymous_variant 0.25
rpoA 3877962 c.546G>T synonymous_variant 0.24
rpoA 3877986 c.522G>C synonymous_variant 0.21
rpoA 3877989 c.519A>G synonymous_variant 0.21
rpoA 3878001 c.507A>G synonymous_variant 0.25
rpoA 3878022 c.486T>C synonymous_variant 0.16
rpoA 3878082 c.426T>C synonymous_variant 0.24
rpoA 3878094 c.414C>G synonymous_variant 0.18
rpoA 3878103 c.405A>G synonymous_variant 0.24
rpoA 3878106 c.402G>C synonymous_variant 0.25
rpoA 3878118 c.390T>C synonymous_variant 0.38
rpoA 3878130 c.378C>G synonymous_variant 0.35
rpoA 3878141 p.Met123Leu missense_variant 0.33
rpoA 3878143 p.Gly122Asp missense_variant 0.33
rpoA 3878163 c.345C>T synonymous_variant 0.33
rpoA 3878169 c.339G>C synonymous_variant 0.35
rpoA 3878184 c.324C>G synonymous_variant 0.25
rpoA 3878187 c.321C>G synonymous_variant 0.26
rpoA 3878193 c.315T>C synonymous_variant 0.26
rpoA 3878205 c.303T>C synonymous_variant 0.23
rpoA 3878217 c.291A>G synonymous_variant 0.26
rpoA 3878247 c.261G>C synonymous_variant 0.24
rpoA 3878271 c.237T>C synonymous_variant 0.31
rpoA 3878276 c.232C>T synonymous_variant 0.31
rpoA 3878284 p.Glu75Ala missense_variant 0.31
rpoA 3878292 c.216T>C synonymous_variant 0.29
rpoA 3878298 c.210A>G synonymous_variant 0.25
rpoA 3878313 c.195G>C synonymous_variant 0.22
rpoA 3878322 c.186A>G synonymous_variant 0.33
rpoA 3878331 c.177A>G synonymous_variant 0.5
rpoA 3878334 c.174T>C synonymous_variant 0.43
rpoA 3878337 c.171T>C synonymous_variant 0.43
rpoA 3878346 c.162T>C synonymous_variant 0.38
rpoA 3878364 c.144A>T synonymous_variant 0.38
rpoA 3878367 c.141C>G synonymous_variant 0.33
rpoA 3878370 c.138T>C synonymous_variant 0.38
rpoA 3878376 c.132G>C synonymous_variant 0.45
rpoA 3878385 c.123C>G synonymous_variant 0.42
rpoA 3878391 c.117T>C synonymous_variant 0.38
rpoA 3878396 c.112C>T synonymous_variant 0.31
rpoA 3878415 c.93C>T synonymous_variant 0.18
rpoA 3878436 c.72A>G synonymous_variant 0.18
rpoA 3878683 c.-176G>C upstream_gene_variant 0.18
ddn 3986648 c.-196C>G upstream_gene_variant 0.28
ddn 3986651 c.-193G>A upstream_gene_variant 0.28
ddn 3986657 c.-187C>G upstream_gene_variant 0.26
ddn 3986665 c.-179G>C upstream_gene_variant 0.28
ddn 3986667 c.-177_-176delCTinsAC upstream_gene_variant 0.28
ddn 3986690 c.-154C>G upstream_gene_variant 0.33
ddn 3986696 c.-148G>C upstream_gene_variant 0.3
clpC1 4038289 p.Asn806Asp missense_variant 0.29
clpC1 4038302 c.2403C>G synonymous_variant 0.33
clpC1 4038308 c.2397G>C synonymous_variant 0.33
clpC1 4038314 c.2391T>C synonymous_variant 0.36
clpC1 4038320 c.2385G>T synonymous_variant 0.38
clpC1 4038347 c.2358G>C synonymous_variant 0.43
clpC1 4038359 c.2346A>G synonymous_variant 0.38
clpC1 4038368 c.2337T>C synonymous_variant 0.38
clpC1 4038388 c.2317T>C synonymous_variant 0.27
clpC1 4038392 c.2313C>T synonymous_variant 0.2
clpC1 4038398 c.2307G>T synonymous_variant 0.2
clpC1 4038403 c.2302T>C synonymous_variant 0.18
clpC1 4038419 c.2286T>C synonymous_variant 0.25
clpC1 4038433 c.2272C>T synonymous_variant 0.3
clpC1 4038444 p.Ala754Lys missense_variant 0.3
clpC1 4038446 c.2259T>C synonymous_variant 0.3
clpC1 4038456 p.Val750Glu missense_variant 0.3
clpC1 4038458 c.2247G>C synonymous_variant 0.3
clpC1 4038461 c.2244G>C synonymous_variant 0.3
clpC1 4038486 p.Gly740Thr missense_variant 0.36
clpC1 4038488 c.2217C>G synonymous_variant 0.36
clpC1 4038494 c.2211G>C synonymous_variant 0.38
clpC1 4038498 p.Ser736Asn missense_variant 0.38
clpC1 4038530 p.Glu725Asp missense_variant 0.31
clpC1 4038533 p.Arg724Lys missense_variant 0.31
clpC1 4038587 c.2118C>T synonymous_variant 0.36
clpC1 4038596 c.2109A>G synonymous_variant 0.36
clpC1 4038623 c.2082A>G synonymous_variant 0.42
clpC1 4038640 p.Asp689Asn missense_variant 0.27
clpC1 4038653 c.2052C>T synonymous_variant 0.27
clpC1 4038658 p.Lys683Gln missense_variant 0.25
clpC1 4038661 p.Ser682Thr missense_variant 0.25
clpC1 4038662 c.2043T>C synonymous_variant 0.25
clpC1 4038671 c.2034T>C synonymous_variant 0.27
clpC1 4038683 c.2022T>C synonymous_variant 0.25
clpC1 4038695 c.2010C>G synonymous_variant 0.18
clpC1 4038701 c.2004G>C synonymous_variant 0.2
clpC1 4038704 c.2001T>C synonymous_variant 0.18
clpC1 4038707 c.1998C>G synonymous_variant 0.17
clpC1 4038710 c.1995G>C synonymous_variant 0.15
clpC1 4038713 c.1992T>C synonymous_variant 0.17
clpC1 4038740 c.1965G>C synonymous_variant 0.17
clpC1 4038755 c.1950G>T synonymous_variant 0.15
clpC1 4038773 c.1932T>C synonymous_variant 0.31
clpC1 4038782 c.1923G>C synonymous_variant 0.33
clpC1 4038790 c.1915C>T synonymous_variant 0.25
clpC1 4038812 c.1893T>C synonymous_variant 0.24
clpC1 4038815 c.1890G>C synonymous_variant 0.22
clpC1 4038878 c.1827A>G synonymous_variant 0.36
clpC1 4038908 c.1797C>G synonymous_variant 0.38
clpC1 4038914 c.1791G>C synonymous_variant 0.46
clpC1 4038923 c.1780_1782delCTAinsTTG synonymous_variant 0.3
clpC1 4038953 c.1752A>G synonymous_variant 0.31
clpC1 4038965 c.1740T>C synonymous_variant 0.33
clpC1 4038971 c.1734T>C synonymous_variant 0.33
clpC1 4038974 c.1731T>C synonymous_variant 0.29
clpC1 4038989 c.1716T>C synonymous_variant 0.4
clpC1 4038997 c.1708T>C synonymous_variant 0.41
clpC1 4039010 c.1695G>A synonymous_variant 0.4
clpC1 4039022 c.1683A>G synonymous_variant 0.31
clpC1 4039025 c.1680C>G synonymous_variant 0.27
clpC1 4039064 c.1641C>T synonymous_variant 0.36
clpC1 4039103 c.1602T>C synonymous_variant 0.39
clpC1 4039106 c.1599G>C synonymous_variant 0.43
clpC1 4039112 c.1593C>G synonymous_variant 0.46
clpC1 4039121 c.1584T>G synonymous_variant 0.44
clpC1 4039133 c.1572C>G synonymous_variant 0.42
clpC1 4039142 c.1563A>G synonymous_variant 0.3
clpC1 4039145 c.1560G>C synonymous_variant 0.3
clpC1 4039169 p.Glu512Asp missense_variant 0.35
clpC1 4039172 c.1533A>G synonymous_variant 0.33
clpC1 4039178 c.1527G>C synonymous_variant 0.33
clpC1 4039183 c.1522T>C synonymous_variant 0.33
clpC1 4039186 c.1519C>T synonymous_variant 0.36
clpC1 4039196 c.1509G>A synonymous_variant 0.31
clpC1 4039199 c.1506C>G synonymous_variant 0.31
clpC1 4039226 c.1479T>C synonymous_variant 0.3
clpC1 4039352 c.1353C>T synonymous_variant 0.16
clpC1 4039364 c.1341C>G synonymous_variant 0.18
clpC1 4039430 c.1275T>C synonymous_variant 0.2
clpC1 4039442 c.1263A>G synonymous_variant 0.21
clpC1 4039508 c.1197G>C synonymous_variant 0.42
clpC1 4039556 c.1149G>C synonymous_variant 0.48
clpC1 4039574 p.Ala377Gly missense_variant 0.5
clpC1 4039577 c.1128T>C synonymous_variant 0.55
clpC1 4039610 c.1095G>C synonymous_variant 0.5
clpC1 4039616 c.1089G>C synonymous_variant 0.5
clpC1 4039622 c.1083C>T synonymous_variant 0.44
clpC1 4039652 c.1053G>C synonymous_variant 0.24
clpC1 4039661 c.1044T>C synonymous_variant 0.2
clpC1 4039850 c.855T>C synonymous_variant 0.15
clpC1 4039865 c.840T>C synonymous_variant 0.23
clpC1 4039898 c.807C>G synonymous_variant 0.44
clpC1 4039904 c.801A>G synonymous_variant 0.47
clpC1 4039931 c.774T>C synonymous_variant 0.47
clpC1 4039946 c.759A>T synonymous_variant 0.4
clpC1 4039952 c.753T>C synonymous_variant 0.33
clpC1 4039979 c.726C>G synonymous_variant 0.33
clpC1 4039991 c.714G>T synonymous_variant 0.29
clpC1 4040090 c.613_615delTCTinsAGC synonymous_variant 0.39
clpC1 4040093 c.612C>G synonymous_variant 0.35
clpC1 4040105 c.600C>G synonymous_variant 0.39
clpC1 4040144 c.561G>C synonymous_variant 0.22
clpC1 4040147 c.558A>G synonymous_variant 0.22
clpC1 4040153 c.552A>G synonymous_variant 0.22
clpC1 4040249 c.456A>G synonymous_variant 0.38
clpC1 4040252 c.453C>G synonymous_variant 0.38
clpC1 4040267 c.438A>G synonymous_variant 0.33
clpC1 4040273 c.432T>C synonymous_variant 0.33
clpC1 4040277 c.427_428delTCinsAG synonymous_variant 0.33
clpC1 4040279 c.426C>G synonymous_variant 0.33
clpC1 4040330 c.375C>G synonymous_variant 0.44
clpC1 4040342 c.363C>G synonymous_variant 0.33
clpC1 4040345 c.360C>G synonymous_variant 0.23
clpC1 4040354 c.351A>G synonymous_variant 0.23
clpC1 4040357 c.348T>C synonymous_variant 0.25
clpC1 4040363 c.342A>C synonymous_variant 0.2
clpC1 4040369 c.336C>G synonymous_variant 0.19
clpC1 4040522 c.183T>C synonymous_variant 0.27
panD 4044072 c.210C>A synonymous_variant 0.31
panD 4044075 c.207T>C synonymous_variant 0.4
panD 4044084 c.198T>C synonymous_variant 0.41
panD 4044093 c.189A>G synonymous_variant 0.4
panD 4044096 c.186C>T synonymous_variant 0.38
panD 4044120 c.162A>G synonymous_variant 0.32
panD 4044123 c.159T>C synonymous_variant 0.33
panD 4044126 c.156T>C synonymous_variant 0.33
panD 4044135 c.147C>T synonymous_variant 0.35
panD 4044138 c.144T>C synonymous_variant 0.38
panD 4044150 c.132A>C synonymous_variant 0.38
panD 4044162 c.120A>G synonymous_variant 0.29
panD 4044165 c.117G>C synonymous_variant 0.21
embC 4240726 c.864G>C synonymous_variant 0.4
embC 4240780 c.918T>C synonymous_variant 0.5
embC 4240783 c.921G>C synonymous_variant 0.45
embC 4240789 c.927T>C synonymous_variant 0.45
embC 4240819 c.957A>G synonymous_variant 0.27
embC 4240831 c.969T>G synonymous_variant 0.23
embC 4240859 p.Leu333Val missense_variant 0.14
embC 4240921 c.1059C>G synonymous_variant 0.25
embC 4240924 c.1062C>G synonymous_variant 0.24
embC 4240936 c.1074A>G synonymous_variant 0.22
embC 4240951 c.1089C>G synonymous_variant 0.28
embC 4240954 p.Ile364Met missense_variant 0.24
embC 4240957 c.1095C>G synonymous_variant 0.27
embC 4240966 c.1104G>C synonymous_variant 0.27
embC 4240978 c.1116G>A synonymous_variant 0.25
embC 4240979 p.Thr373Gln missense_variant 0.25
embC 4240983 p.Ser374Asn missense_variant 0.27
embC 4240990 c.1128A>C synonymous_variant 0.27
embC 4241017 c.1155T>C synonymous_variant 0.27
embC 4241020 c.1158G>C synonymous_variant 0.27
embC 4241023 c.1161T>G synonymous_variant 0.25
embC 4241038 c.1176G>C synonymous_variant 0.23
embC 4241047 c.1185C>G synonymous_variant 0.18
embC 4241048 p.Leu396Phe missense_variant 0.17
embC 4241719 c.1857G>C synonymous_variant 0.38
embC 4241741 p.Val627Leu missense_variant 0.33
embC 4241747 p.Val629Leu missense_variant 0.3
embC 4241750 p.Leu630Val missense_variant 0.27
embC 4241755 c.1893C>G synonymous_variant 0.23
embC 4241756 c.1894C>T synonymous_variant 0.23
embC 4241770 c.1908T>C synonymous_variant 0.23
embC 4241791 c.1929G>C synonymous_variant 0.23
embC 4241794 c.1932C>G synonymous_variant 0.21
embC 4241797 c.1935C>T synonymous_variant 0.21
embC 4241809 c.1947A>G synonymous_variant 0.25
embA 4242643 c.-590C>T upstream_gene_variant 1.0
embA 4242820 c.-413G>C upstream_gene_variant 0.15
embA 4243460 c.228C>T synonymous_variant 1.0
embA 4244879 c.1647C>G synonymous_variant 0.4
embA 4244885 c.1653A>G synonymous_variant 0.4
embA 4244886 c.1654C>T synonymous_variant 0.4
embA 4244897 c.1665T>C synonymous_variant 0.4
embA 4244900 c.1668G>C synonymous_variant 0.4
embA 4244903 c.1671G>C synonymous_variant 0.29
embA 4244904 p.Val558Phe missense_variant 0.29
embA 4244915 c.1683G>C synonymous_variant 0.22
embA 4244916 c.1684C>T synonymous_variant 0.22
embA 4244919 c.1687_1689delCTCinsTTG synonymous_variant 0.22
embA 4244933 c.1701A>G synonymous_variant 0.18
embA 4244936 c.1704C>G synonymous_variant 0.2
embA 4244945 c.1713C>G synonymous_variant 0.18
embA 4245078 p.Trp616Val missense_variant 0.15
embA 4245101 c.1869G>C synonymous_variant 0.24
embA 4245137 c.1905T>C synonymous_variant 0.19
embA 4245143 c.1911C>T synonymous_variant 0.24
embA 4245149 c.1917C>G synonymous_variant 0.24
embA 4245182 c.1950T>C synonymous_variant 0.24
embA 4245186 p.Thr652Ala missense_variant 0.25
embA 4245206 c.1974A>C synonymous_variant 0.14
embA 4245215 c.1983A>C synonymous_variant 0.15
embA 4245222 p.Tyr664Gln missense_variant 0.2
embA 4246338 p.Leu1036Met missense_variant 0.25
embB 4246361 c.-153C>G upstream_gene_variant 0.31
embB 4246376 c.-138G>C upstream_gene_variant 0.31
embA 4246383 p.Tyr1051His missense_variant 0.38
embB 4246400 c.-114G>C upstream_gene_variant 0.23
embA 4246413 p.His1061Phe missense_variant 0.25
embB 4246419 c.-95C>T upstream_gene_variant 0.25
embB 4246430 c.-84C>T upstream_gene_variant 0.17
embB 4247375 p.Leu288Val missense_variant 0.25
embB 4247380 c.867C>G synonymous_variant 0.31
embB 4247386 c.873T>C synonymous_variant 0.36
embB 4247389 c.876C>G synonymous_variant 0.4
embB 4247395 c.882C>G synonymous_variant 0.5
embB 4247401 c.888T>C synonymous_variant 0.54
embB 4247437 c.924A>C synonymous_variant 0.62
embB 4247464 c.951C>G synonymous_variant 0.58
embB 4247470 c.957T>C synonymous_variant 0.5
embB 4247476 c.963C>T synonymous_variant 0.5
embB 4247491 c.978G>C synonymous_variant 0.38
embB 4247497 c.984T>C synonymous_variant 0.27
embB 4247914 c.1401G>C synonymous_variant 0.4
embB 4247920 c.1407T>C synonymous_variant 0.5
embB 4247923 c.1410T>C synonymous_variant 0.4
embB 4247940 p.Leu476Trp missense_variant 0.5
embB 4247945 c.1432T>C synonymous_variant 0.5
embB 4247951 p.Ser480Ala missense_variant 0.57
embB 4247974 c.1461C>G synonymous_variant 0.67
embB 4247980 c.1467C>A synonymous_variant 0.57
embB 4248007 c.1494C>G synonymous_variant 0.5
embB 4248070 c.1557T>C synonymous_variant 0.25
embB 4248085 c.1572T>C synonymous_variant 0.22
embB 4248088 c.1575C>T synonymous_variant 0.18
embB 4248097 c.1584C>G synonymous_variant 0.18
embB 4248118 c.1605T>C synonymous_variant 0.23
embB 4248122 c.1609C>T synonymous_variant 0.23
embB 4248130 c.1617G>T synonymous_variant 0.21
embB 4248139 c.1626C>G synonymous_variant 0.15
embB 4248157 c.1644A>G synonymous_variant 0.15
embB 4248160 c.1647C>T synonymous_variant 0.14
embB 4248277 c.1764G>C synonymous_variant 0.21
embB 4248322 c.1809G>A synonymous_variant 0.14
embB 4248350 c.1837T>C synonymous_variant 0.18
aftB 4267577 c.1260C>T synonymous_variant 0.2
aftB 4267580 c.1257G>C synonymous_variant 0.18
aftB 4267607 c.1230G>A synonymous_variant 0.29
aftB 4267622 c.1215G>C synonymous_variant 0.25
aftB 4267625 c.1212T>C synonymous_variant 0.25
aftB 4267647 p.Asp397Gly missense_variant 0.86
aftB 4269123 c.-287T>A upstream_gene_variant 0.16
aftB 4269132 c.-296G>C upstream_gene_variant 0.19
ubiA 4269141 p.Leu231Ile missense_variant 0.19
aftB 4269147 c.-311G>C upstream_gene_variant 0.18
ubiA 4269164 p.Leu224Met missense_variant 0.37
aftB 4269177 c.-341G>C upstream_gene_variant 0.44
aftB 4269201 c.-365A>G upstream_gene_variant 0.62
aftB 4269210 c.-374G>A upstream_gene_variant 0.58
ubiA 4269220 p.Ala205Lys missense_variant 0.45
aftB 4269222 c.-386T>C upstream_gene_variant 0.42
aftB 4269234 c.-398A>G upstream_gene_variant 0.36
ubiA 4269240 p.Leu198Val missense_variant 0.31
ubiA 4269243 p.His197Gln missense_variant 0.29
aftB 4269255 c.-419C>T upstream_gene_variant 0.25
aftB 4269594 c.-758A>C upstream_gene_variant 0.19
aftB 4269606 c.-770T>C upstream_gene_variant 0.18
aftB 4269624 c.-788C>T upstream_gene_variant 0.14
aftB 4269639 c.-803C>G upstream_gene_variant 0.15
aftB 4269744 c.-908G>A upstream_gene_variant 0.17
aftB 4269750 c.-914A>G upstream_gene_variant 0.18
aftB 4269762 c.-926C>G upstream_gene_variant 0.17
aftB 4269765 c.-929G>C upstream_gene_variant 0.17
ubiA 4269782 p.Val18Ile missense_variant 0.13
whiB6 4338595 c.-75delG upstream_gene_variant 1.0
gid 4407588 c.615A>G synonymous_variant 1.0
gid 4407620 p.Tyr195His missense_variant 1.0
gid 4407927 p.Glu92Asp missense_variant 1.0