Rv0667 - c.534G>C


Drug resistance types
41 Sensitive 19 RR-TB 90 HR-TB 46 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 102 Other
lineage Counts
lineage Count
4
La1.7;M.canetti;lineage4.9 5
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
La3;M.canetti;lineage2.1;lineage4.9 12
lineage4.9 95
lineage4.6.2.2 2
lineage4.9;lineage7 1
lineage1.2.1.2 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage4.2;lineage4.6.3;lineage4.9 1
lineage2.2.1 12
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
lineage4.3.4.1 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.1;lineage4.9 23
La1.7 2
lineage4.1.2.1 15
lineage4.1;lineage4.9 1
lineage4.6.1.1 1
lineage4.8 3
M.canetti;lineage2.1;lineage4 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage2.1;lineage4.9 6
La2;lineage2.2 1
lineage4 5
La1.7;lineage4.9 8
La1.7.1 2
La3;M.canetti;lineage4.9 2
lineage2.2 4
lineage4.8.1 1
M.canetti;lineage2.2 1
M.canetti;lineage4.9 5
La1.2;La1.8.1 1
lineage3 5
M.canetti;lineage4.3.1;lineage4.9 1
M.canetti;lineage1 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage4.4.1.1 2
La1.7.1;La1.7.X-unk4;lineage7 1
La1.4 1
lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
M.canetti;lineage2.1;lineage3 1
lineage4.3.4.2.1 1
lineage2.1;lineage4.9;lineage6.3 1
La1.8.1 2
lineage2.2.1.2 1
lineage1.2.2.2 2
lineage4.3.4 1
lineage4.1.1.3 4
lineage1.1.2;lineage4 1
lineage4.5 2
La3;lineage4.3.4 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4.1.2.1.1 1
lineage4.3.3 2
La3;lineage4.9 5
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1 1
lineage4.1;lineage4.8 2
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;M.canetti;lineage4.8;lineage4.9 1
M.canetti;lineage4.9;lineage9 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.1;lineage4.3.2 1
lineage4.9.1 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage6.3 1
lineage6.1.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage2.1;lineage2.2;lineage6.3 1
lineage1.1 1
La1.2.BCG 2
lineage1.1.1 1
spoligotype Counts
spoligotype Count
None 301
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9786843 Other None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6044815 Other lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR4819422 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR12006550 Sensitive lineage1.2.1.2 None
ERR926165 Sensitive lineage4.9 None
SRR3675243 Other lineage4.9 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6046878 Other lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR3275196 Other lineage2.2.1 nl
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6326069 Pre-XDR-TB lineage4.3.4.1 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR926157 Sensitive lineage4.9 None
SRR1180137 Other lineage2.2.1 None
SRR3675222 Other La1.7 None
ERR3797029 Other lineage4.9 None
SRR1165506 Other lineage4.1.2.1 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR2514327 HR-TB lineage4.8 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR3675265 Other lineage4 None
ERR8665994 Other lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
SRR5535933 Other lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
ERR3797083 RR-TB lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR6045053 Other lineage4 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
SRR6046046 Other lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1162740 Other lineage4.1.2.1 None
ERR4799025 Other lineage4.8 None
SRR6046492 Other lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
SRR3675267 Other La1.7;lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR3468544 Other lineage2.1;lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR4816852 Other lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR4797588 MDR-TB lineage3 None
ERR5917710 Other lineage4.1.2.1 None
ERR161037 Other lineage4.9 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
SRR15014655 Other M.canetti;lineage1 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR5709967 MDR-TB lineage2.2.1 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR990545 Other lineage3 None
ERR4819877 HR-TB lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR29096784 Sensitive lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
SRR1173767 MDR-TB lineage4.4.1.1 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046594 Sensitive lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6045706 Sensitive lineage4.9 None
SRR29050928 Other lineage4.9 None
SRR9971080 RR-TB lineage2.2.1 None
SRR16278274 Other La1.4 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR11662690 HR-TB lineage4.9 None
SRR1165584 Other lineage4.1.2.1 None
SRR3675383 Sensitive lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4818536 Other lineage4.9 None
ERR2509673 Other lineage2.2.1 None
SRR1162864 Other lineage4.1.2.1 None
ERR4819462 Sensitive lineage4.9 None
ERR926156 Sensitive lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR1181289 Other lineage2.2.1 None
SRR6045555 Other lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797023 HR-TB La1.8.1 None
SRR10808668 Sensitive lineage2.2.1 None
ERR4810624 MDR-TB lineage2.2 None
SRR1175127 Other lineage2.2.1.2 None
ERR4797285 MDR-TB lineage1.2.2.2 None
ERR736817 HR-TB lineage4.3.4 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR1183049 RR-TB lineage2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR2693228 RR-TB lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR1167055 Other lineage4.1.2.1 None
SRR1181020 Other lineage2.2.1 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4830353 Other La1.7 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR14782054 Other lineage4.9 None
SRR13861153 Other lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR212123 Other lineage4.9 None
SRR13423649 Sensitive lineage2.2.1 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR14801749 HR-TB lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4817692 HR-TB lineage1.1.2;lineage4 None
ERR4816548 HR-TB lineage4.5 None
ERR4769450 Other lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
SRR29096178 Sensitive lineage4.9 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
SRR10808399 Sensitive lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR1791696 Other La1.8.1 None
SRR6044942 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR3675260 Sensitive lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR971389 Sensitive lineage4.9 None
ERR9786711 Sensitive lineage4.6.2.2 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR14782405 HR-TB lineage4.9 None
SRR26159066 Sensitive lineage4.9 None
SRR3675494 RR-TB lineage4.9 None
ERR4769452 Other lineage4.9 None
SAMN02414850 Other lineage4.1.2.1 None
ERR5908228 RR-TB lineage4.3.3 None
SRR29017081 Sensitive lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR473334 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR28044634 Other lineage3 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR234659 Other None
SRR10808730 Other lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR181824 HR-TB lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR7240492 HR-TB La1.7.1 None
SRR1173453 Other lineage4.4.1.1 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR1640750 Other None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
SRR6045503 Sensitive lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283042 Other lineage4.9 None
ERR4816322 Other lineage4.9 None
SRR13861288 Other lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3468607 Other lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR3675507 Other lineage4.9 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR369151 Other lineage4.9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR3675482 Other lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR245758 Other lineage4.9.1 None
ERR5162090 RR-TB lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4821053 RR-TB lineage3 None
ERR3797048 Other La3;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4178309 Other lineage4.1.2.1 None
ERR926162 Sensitive lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR926160 Sensitive lineage4.9 None
ERR4816551 HR-TB lineage4.1.1.3 None
SRR5341330 Other lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR6045347 Other lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
SRR29050859 Other lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR926163 Other lineage4.9 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR4797201 Other lineage1.2.2.2 None
SRR7535086 Other None
SRR13423544 Other lineage4.5 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR926154 Sensitive lineage4.9 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR926164 Other lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR21677886 Sensitive lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2660539 Other lineage4.9 None
ERR1023236 Other lineage6.1.3 None
SRR3675488 Other La1.7;lineage4.9 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1165423 RR-TB lineage4.1.2.1 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR13591342 HR-TB lineage4.1.1.3 None
ERR369157 Sensitive lineage4.9 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR3283018 HR-TB lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR6359082 Other lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR1915487 Other La1.2.BCG None
ERR9119096 RR-TB lineage4.3.3 None
SRR13861400 Other lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None