Run ID: ERR216938
Sample name:
Date: 2024-10-04T01:38:01.686059
Number of reads: 197231
Percentage reads mapped: 8.91
Median coverage: 0.0
Strain: La1.7;lineage4.9
Spoligotype:
Drug-resistance: HR-TB
Lineage | Family | RDs | Frequency |
---|---|---|---|
La1.7 | M.bovis | None | 0.05 |
lineage4 | Euro-American | None | 1.0 |
lineage4.9 | Euro-American (H37Rv-like) | None | 0.93 |
Drug | Resistance | Supporting mutations | WHO confidence | Comment |
---|---|---|---|---|
rifampicin | ||||
isoniazid | katG | p.Ser140Asn | Uncertain significance | Mutation from literature |
ethambutol | ||||
pyrazinamide | ||||
streptomycin | ||||
fluoroquinolones | ||||
moxifloxacin | ||||
ofloxacin | ||||
levofloxacin | ||||
ciprofloxacin | ||||
aminoglycosides | ||||
amikacin | ||||
capreomycin | ||||
kanamycin | ||||
cycloserine | ||||
ethionamide | ||||
clofazimine | ||||
para-aminosalicylic_acid | ||||
delamanid | ||||
bedaquiline | ||||
linezolid |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs | Confidence | Comment |
---|---|---|---|---|---|---|---|
katG | 2155693 | p.Ser140Asn | missense_variant | 1.0 | isoniazid | Uncertain significance | Mutation from literature |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs | Confidence |
---|---|---|---|---|---|---|
dnaA | 672 | c.672T>C | synonymous_variant | 0.88 | isoniazid | Not assoc w R - Interim |
dnaA | 678 | c.678A>G | synonymous_variant | 0.88 | isoniazid | Not assoc w R - Interim |
dnaA | 681 | c.681G>A | synonymous_variant | 0.88 | isoniazid | |
dnaA | 682 | c.682T>C | synonymous_variant | 0.88 | isoniazid | |
dnaA | 687 | c.687C>T | synonymous_variant | 0.88 | isoniazid | |
dnaA | 690 | c.690G>C | synonymous_variant | 0.88 | isoniazid | |
dnaA | 693 | c.693A>C | synonymous_variant | 0.94 | isoniazid | |
dnaA | 702 | c.702C>G | synonymous_variant | 0.9 | isoniazid | |
dnaA | 705 | c.705A>G | synonymous_variant | 0.9 | isoniazid | |
dnaA | 708 | c.708T>C | synonymous_variant | 0.9 | isoniazid | |
dnaA | 714 | c.714C>G | synonymous_variant | 0.91 | isoniazid | Not assoc w R - Interim |
dnaA | 741 | c.741T>C | synonymous_variant | 0.93 | isoniazid | Not assoc w R - Interim |
dnaA | 750 | c.750C>G | synonymous_variant | 0.9 | isoniazid | |
dnaA | 756 | c.756T>C | synonymous_variant | 0.92 | isoniazid | |
dnaA | 765 | c.765G>A | synonymous_variant | 0.9 | isoniazid | |
dnaA | 767 | p.Val256Ala | missense_variant | 0.9 | isoniazid | |
dnaA | 769 | p.Ala257Ser | missense_variant | 0.9 | isoniazid | Uncertain significance |
dnaA | 793 | p.Val265Ile | missense_variant | 0.91 | isoniazid | Uncertain significance |
dnaA | 805 | c.805_807delTTGinsCTC | synonymous_variant | 0.95 | isoniazid | |
dnaA | 810 | c.810C>G | synonymous_variant | 0.95 | isoniazid | |
dnaA | 822 | c.822A>G | synonymous_variant | 0.93 | isoniazid | |
dnaA | 828 | c.828T>C | synonymous_variant | 0.92 | isoniazid | Not assoc w R - Interim |
dnaA | 837 | c.837A>G | synonymous_variant | 0.92 | isoniazid | |
dnaA | 840 | c.840G>A | synonymous_variant | 0.92 | isoniazid | |
dnaA | 843 | c.843T>C | synonymous_variant | 0.92 | isoniazid | Not assoc w R - Interim |
dnaA | 846 | c.846T>C | synonymous_variant | 0.92 | isoniazid | |
dnaA | 849 | c.849A>G | synonymous_variant | 1.0 | isoniazid | |
dnaA | 876 | c.876C>G | synonymous_variant | 1.0 | isoniazid | |
dnaA | 877 | c.877T>C | synonymous_variant | 1.0 | isoniazid | |
dnaA | 885 | c.885T>C | synonymous_variant | 1.0 | isoniazid | |
dnaA | 888 | c.888C>G | synonymous_variant | 1.0 | isoniazid | |
dnaA | 897 | c.897A>G | synonymous_variant | 1.0 | isoniazid | |
dnaA | 909 | c.909A>G | synonymous_variant | 1.0 | isoniazid | |
dnaA | 912 | c.912T>C | synonymous_variant | 1.0 | isoniazid | |
dnaA | 921 | c.921A>G | synonymous_variant | 1.0 | isoniazid | Not assoc w R - Interim |
dnaA | 927 | c.927G>A | synonymous_variant | 1.0 | isoniazid | |
dnaA | 933 | c.933C>G | synonymous_variant | 1.0 | isoniazid | |
dnaA | 955 | c.955_957delAGAinsCGC | synonymous_variant | 1.0 | isoniazid | |
dnaA | 963 | c.963C>G | synonymous_variant | 1.0 | isoniazid | |
dnaA | 966 | c.966T>C | synonymous_variant | 1.0 | isoniazid | |
dnaA | 975 | c.975G>T | synonymous_variant | 1.0 | isoniazid | |
dnaA | 976 | c.976C>T | synonymous_variant | 1.0 | isoniazid | Not assoc w R - Interim |
dnaA | 984 | c.984T>C | synonymous_variant | 1.0 | isoniazid | Not assoc w R - Interim |
dnaA | 990 | c.990A>C | synonymous_variant | 1.0 | isoniazid | |
dnaA | 999 | c.999C>G | synonymous_variant | 1.0 | isoniazid | |
dnaA | 1003 | c.1003C>T | synonymous_variant | 1.0 | isoniazid | |
dnaA | 1011 | c.1011C>G | synonymous_variant | 1.0 | isoniazid | |
dnaA | 1020 | c.1020C>G | synonymous_variant | 1.0 | isoniazid | |
dnaA | 1024 | c.1024_1026delTTGinsCTT | synonymous_variant | 1.0 | isoniazid | |
dnaA | 1068 | c.1068T>C | synonymous_variant | 1.0 | isoniazid | |
dnaA | 1092 | c.1092T>C | synonymous_variant | 1.0 | isoniazid | Not assoc w R - Interim |
dnaA | 1098 | c.1098A>G | synonymous_variant | 1.0 | isoniazid | |
dnaA | 1104 | c.1104T>C | synonymous_variant | 1.0 | isoniazid | |
dnaA | 1113 | c.1113A>G | synonymous_variant | 1.0 | isoniazid | |
dnaA | 1122 | c.1122C>T | synonymous_variant | 1.0 | isoniazid | |
dnaA | 1152 | c.1152A>G | synonymous_variant | 1.0 | isoniazid | |
dnaA | 1153 | c.1153T>C | synonymous_variant | 1.0 | isoniazid | |
dnaA | 1161 | c.1161A>G | synonymous_variant | 1.0 | isoniazid | |
dnaA | 1164 | c.1164A>C | synonymous_variant | 1.0 | isoniazid | |
dnaA | 1167 | c.1167A>G | synonymous_variant | 1.0 | isoniazid | Not assoc w R - Interim |
dnaA | 1176 | c.1176A>G | synonymous_variant | 1.0 | isoniazid | |
dnaA | 1177 | p.Ala393Ser | missense_variant | 1.0 | isoniazid | |
dnaA | 1191 | c.1191T>C | synonymous_variant | 1.0 | isoniazid | |
gyrB | 6100 | c.861G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6115 | c.876A>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6127 | c.888G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6130 | c.891T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6187 | c.948C>T | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6538 | c.-764C>A | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6547 | c.-755T>C | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6550 | c.1311A>G | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6551 | c.1312T>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 6571 | c.-731T>C | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6577 | c.1338T>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 6583 | c.-719G>C | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6637 | c.-665T>G | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6640 | c.-662A>C | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6643 | c.-659A>G | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6655 | c.-647T>C | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6664 | c.1425C>T | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6680 | c.1441C>T | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 6700 | c.-602T>C | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6703 | c.-599G>C | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6706 | c.-596G>A | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6709 | c.-593A>G | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6712 | c.-590G>C | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6722 | c.-580C>A | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6730 | c.-572A>G | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6745 | c.1506T>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 6751 | c.-551G>C | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6760 | c.-542G>C | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6775 | c.-527G>T | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6793 | c.1554T>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6794 | p.Ile519Leu | missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6797 | p.Gly520Ser | missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6811 | c.1572C>T | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7030 | c.-272C>G | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7033 | c.-269G>C | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 7051 | p.Glu604Asp | missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 7060 | c.1821T>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7075 | c.-227T>C | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7078 | c.-224A>C | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7081 | c.-221T>C | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7084 | c.-218A>G | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7090 | c.-212C>T | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7093 | c.-209T>G | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7114 | c.-188C>G | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7526 | c.225G>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7529 | c.228G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7538 | c.237G>A | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7541 | c.240C>G | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7565 | c.264C>T | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7569 | p.Ala90Ser | missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7585 | p.Ser95Thr | missense_variant | 1.0 | levofloxacin | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
gyrA | 7589 | c.288G>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7595 | c.294C>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7601 | c.300C>G | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7607 | c.306C>G | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7625 | c.324G>A | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7628 | c.327G>T | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7631 | c.330G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7637 | c.336C>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7676 | c.375G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7683 | c.382_384delAGGinsCGA | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7697 | c.396C>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7700 | c.399G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7703 | c.402G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7706 | c.405C>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7710 | c.409T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7715 | c.414G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7725 | c.424C>T | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | ||||||
gyrA | 7728 | c.427_429delAGGinsCGT | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7760 | c.459C>T | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7763 | c.462T>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7778 | c.477G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7796 | c.495G>T | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7799 | c.498A>G | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7814 | c.513C>G | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8126 | c.825G>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8129 | c.828T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8156 | c.855T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8168 | c.867A>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8177 | c.876A>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8192 | c.891C>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8198 | c.897T>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8294 | c.993T>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8324 | c.1023T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8330 | c.1029C>G | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8339 | c.1038A>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8504 | c.1203G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8516 | c.1215T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8519 | c.1218A>G | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8526 | c.1225C>A | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8540 | c.1239C>G | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8546 | c.1245T>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8547 | p.Ile416Val | missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8552 | c.1251C>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8558 | c.1257C>G | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | ||||||
gyrA | 8561 | c.1260A>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8570 | c.1269G>A | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8603 | c.1302A>G | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8619 | c.1318T>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8624 | c.1323G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8630 | c.1329G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8636 | c.1335A>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8645 | c.1344C>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8655 | p.Ile452Val | missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8663 | c.1362C>T | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8672 | c.1371A>G | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8897 | c.1596T>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8903 | c.1602T>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8915 | c.1614A>G | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8933 | c.1632G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8939 | c.1638T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8942 | c.1641G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8946 | c.1645T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8967 | p.Ala556Asn | missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8981 | c.1680G>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8996 | c.1695T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8998 | p.Leu566Trp | missense_variant | 1.0 | levofloxacin | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
gyrA | 9017 | c.1716C>G | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9023 | c.1722A>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9029 | c.1728T>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9051 | c.1750T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9062 | c.1761C>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9065 | c.1764C>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9071 | c.1770G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9080 | c.1779G>T | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9089 | c.1788G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9092 | c.1791C>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9099 | c.1798_1800delTTAinsCTG | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9104 | c.1803C>A | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9113 | c.1812C>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9182 | c.1881T>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9188 | p.Asn629Lys | missense_variant | 1.0 | levofloxacin | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
gyrA | 9200 | c.1899A>G | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9230 | c.1929T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9242 | c.1941A>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9248 | c.1947G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9254 | c.1953C>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9263 | c.1962C>T | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9267 | p.Asn656Gly | missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9276 | c.1975C>T | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | ||||||
gyrA | 9284 | c.1983T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9296 | c.1995T>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9304 | p.Gly668Glu | missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9323 | c.2022C>G | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9332 | p.Asn677Lys | missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9335 | c.2034G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9341 | c.2040C>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9345 | c.2044A>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9353 | c.2052G>A | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9356 | c.2055G>A | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9369 | c.2068C>T | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9377 | c.2076A>G | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9383 | c.2082T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9386 | c.2085T>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9395 | c.2094G>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
fgd1 | 491013 | c.231C>G | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491016 | c.234C>G | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491043 | c.261T>G | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491049 | c.267T>C | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491058 | c.276C>G | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491064 | c.282A>C | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491076 | c.294G>C | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491077 | p.Asn99Asp | missense_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491082 | c.300T>C | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491083 | p.Val101Ile | missense_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491091 | c.309T>C | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491115 | c.333G>C | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491121 | c.339A>G | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491283 | p.Asp167Glu | missense_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491286 | c.504G>C | synonymous_variant | 1.0 | pretomanid | |
delamanid | Not assoc w R - Interim | |||||
clofazimine | Not assoc w R - Interim | |||||
fgd1 | 491290 | p.Val170Ile | missense_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491296 | p.Val172Ile | missense_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491307 | c.525C>G | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491310 | c.528C>G | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491316 | c.534C>G | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491320 | p.Ala180Gln | missense_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491349 | c.567T>C | synonymous_variant | 1.0 | pretomanid | |
delamanid | Not assoc w R - Interim | |||||
clofazimine | Not assoc w R - Interim | |||||
fgd1 | 491526 | c.744T>C | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491542 | c.760T>C | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491547 | c.765A>C | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491550 | c.768T>C | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491569 | p.Asp263Asn | missense_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491580 | p.Ile266Met | missense_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491601 | c.819T>C | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491603 | p.Ala274Glu | missense_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491610 | c.828A>C | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491616 | c.834A>G | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491620 | p.Ile280Val | missense_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491641 | p.Ala287Ser | missense_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491649 | c.867C>T | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491658 | c.876A>G | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
mshA | 575830 | c.483C>G | synonymous_variant | 1.0 | isoniazid | |
ethionamide | ||||||
mshA | 575864 | c.517_519delTTGinsCTC | synonymous_variant | 1.0 | isoniazid | |
ethionamide | ||||||
mshA | 575878 | c.531A>G | synonymous_variant | 1.0 | isoniazid | |
ethionamide | ||||||
mshA | 575887 | c.540G>C | synonymous_variant | 1.0 | isoniazid | |
ethionamide | ||||||
mshA | 575893 | c.546C>G | synonymous_variant | 1.0 | isoniazid | |
ethionamide | ||||||
mshA | 575896 | c.549G>C | synonymous_variant | 1.0 | isoniazid | |
ethionamide | ||||||
mshA | 575905 | c.558G>C | synonymous_variant | 1.0 | isoniazid | |
ethionamide | ||||||
mshA | 575908 | c.561A>G | synonymous_variant | 1.0 | isoniazid | |
ethionamide | ||||||
mshA | 575911 | c.564G>C | synonymous_variant | 1.0 | isoniazid | |
ethionamide | ||||||
mshA | 575925 | p.Gly193Ala | missense_variant | 1.0 | isoniazid | |
ethionamide | ||||||
mshA | 575932 | c.585G>A | synonymous_variant | 1.0 | isoniazid | |
ethionamide | ||||||
mshA | 575944 | c.597T>C | synonymous_variant | 1.0 | isoniazid | |
ethionamide | ||||||
mshA | 575945 | p.Thr200Ala | missense_variant | 1.0 | isoniazid | |
ethionamide | ||||||
mshA | 575953 | c.606G>C | synonymous_variant | 1.0 | isoniazid | |
ethionamide | ||||||
mshA | 575956 | c.609G>A | synonymous_variant | 1.0 | isoniazid | |
ethionamide | ||||||
ccsA | 620598 | c.708C>G | synonymous_variant | 1.0 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 620604 | c.714C>G | synonymous_variant | 1.0 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 620607 | c.717T>G | synonymous_variant | 1.0 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 620622 | c.732G>C | synonymous_variant | 1.0 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 620625 | c.735A>C | synonymous_variant | 1.0 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 620631 | c.741T>G | synonymous_variant | 1.0 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 620649 | c.759A>G | synonymous_variant | 1.0 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 620652 | c.762C>G | synonymous_variant | 1.0 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 620694 | c.804C>G | synonymous_variant | 1.0 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 620698 | p.Val270Ile | missense_variant | 1.0 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 620703 | c.813G>C | synonymous_variant | 1.0 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 620710 | p.Val274Ile | missense_variant | 1.0 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
hadA | 731753 | c.-177A>C | upstream_gene_variant | 1.0 | isoniazid | |
hadA | 731774 | c.-156T>C | upstream_gene_variant | 1.0 | isoniazid | |
hadA | 731789 | c.-141A>G | upstream_gene_variant | 1.0 | isoniazid | |
hadA | 731799 | c.-131_-129delCGCinsAGG | upstream_gene_variant | 1.0 | isoniazid | |
hadA | 731807 | c.-123C>T | upstream_gene_variant | 1.0 | isoniazid | |
hadA | 731810 | c.-120G>C | upstream_gene_variant | 1.0 | isoniazid | |
nusG | 734439 | c.186C>G | synonymous_variant | 1.0 | rifampicin | |
nusG | 734451 | c.198G>C | synonymous_variant | 1.0 | rifampicin | |
nusG | 734454 | c.201A>G | synonymous_variant | 1.0 | rifampicin | |
nusG | 734460 | c.207G>C | synonymous_variant | 1.0 | rifampicin | |
nusG | 734472 | c.219T>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
nusG | 734475 | c.222T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
nusG | 734499 | c.246G>C | synonymous_variant | 1.0 | rifampicin | |
nusG | 734532 | c.279A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
nusG | 734541 | c.288A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
nusG | 734559 | c.306T>C | synonymous_variant | 1.0 | rifampicin | |
mmaA3 | 738339 | c.-190G>C | upstream_gene_variant | 1.0 | isoniazid | |
mmaA3 | 738343 | c.-196_-195delGT | upstream_gene_variant | 1.0 | isoniazid | |
mmaA3 | 738349 | c.-201_-200delAAinsGACG | upstream_gene_variant | 1.0 | isoniazid | |
rpoB | 760118 | c.312T>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760121 | c.315T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760130 | p.Asp108Glu | missense_variant | 1.0 | rifampicin | Uncertain significance |
rpoB | 760139 | c.333A>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760142 | c.336C>G | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760181 | c.375T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760184 | c.378A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760196 | c.390C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760223 | c.417T>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760235 | c.429T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760253 | c.447T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760271 | c.465C>G | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760298 | c.492G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760310 | c.504G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760313 | c.507G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760317 | c.511_512delAGinsTC | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760325 | c.519G>T | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760328 | c.522G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760331 | c.525G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760337 | c.531C>G | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760340 | c.534G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760343 | c.537G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760359 | p.Ile185Arg | missense_variant | 1.0 | rifampicin | |
rpoB | 760368 | p.Ser188Thr | missense_variant | 1.0 | rifampicin | |
rpoB | 760406 | c.600G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760407 | p.Ser201Gly | missense_variant | 1.0 | rifampicin | Uncertain significance |
rpoB | 760418 | c.612G>A | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760430 | c.624T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760457 | c.651C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760472 | c.666C>T | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760475 | c.669A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760481 | c.675G>T | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760484 | c.678A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760522 | p.Ser239Thr | missense_variant | 1.0 | rifampicin | |
rpoB | 760532 | c.726T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760533 | p.Val243Thr | missense_variant | 1.0 | rifampicin | |
rpoB | 760541 | c.735G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760547 | c.741G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760563 | p.Arg253Met | missense_variant | 1.0 | rifampicin | Uncertain significance |
rpoB | 760591 | p.Val262Ala | missense_variant | 1.0 | rifampicin | |
rpoB | 760611 | c.805T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760619 | c.813C>T | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760634 | c.828T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760646 | c.840C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760655 | c.849A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760661 | c.855A>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760670 | c.864G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760674 | c.868T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760679 | c.873A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760683 | c.877T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760718 | c.912C>A | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760721 | c.915C>G | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760724 | c.918T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760730 | c.924T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760925 | c.1119T>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761036 | c.1230G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761037 | c.1231T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761051 | c.1245G>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761054 | c.1248G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761060 | c.1254C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761063 | c.1257C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761097 | c.1291_1293delAGCinsTCG | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761102 | c.1296A>G | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761132 | c.1326G>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761133 | c.1327T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761147 | c.1341C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761150 | c.1344A>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761153 | c.1347G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761162 | c.1356G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761165 | c.1359G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761180 | c.1374A>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761189 | c.1383T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761195 | c.1389G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761198 | c.1392G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761240 | c.1434C>T | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761249 | c.1443A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761252 | c.1446C>G | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761261 | c.1455G>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761318 | c.1512G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761327 | c.1521A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761570 | c.1764T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761573 | c.1767C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761579 | c.1773G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761606 | c.1800C>G | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761612 | c.1806G>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761615 | c.1809A>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761636 | c.1830G>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761645 | c.1839C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761648 | c.1842T>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761666 | c.1860G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761675 | c.1869G>T | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761681 | c.1875G>A | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761690 | c.1884G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761931 | c.2125C>T | synonymous_variant | 0.91 | rifampicin | |
rpoB | 761948 | c.2142G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761954 | c.2148C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761969 | c.2163G>A | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761999 | c.2193G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 762038 | c.2232C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762053 | c.2247T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762065 | c.2259T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762083 | c.2277T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762086 | c.2280G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762101 | c.2295C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762114 | p.Ile770Val | missense_variant | 1.0 | rifampicin | Uncertain significance |
rpoB | 762122 | c.2316C>T | synonymous_variant | 1.0 | rifampicin | |
rpoB | 762140 | c.2334G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 762143 | c.2337T>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 762149 | c.2343G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762158 | c.2352G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762167 | c.2361T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762176 | c.2370T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762185 | c.2379G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762233 | c.2427G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762251 | c.2445G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 762254 | c.2448T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762257 | c.2451C>G | synonymous_variant | 1.0 | rifampicin | |
rpoB | 762275 | c.2469C>G | synonymous_variant | 1.0 | rifampicin | |
rpoB | 762284 | c.2478G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762293 | c.2487T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762317 | c.2511A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762329 | c.2523G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762335 | c.2529C>T | synonymous_variant | 1.0 | rifampicin | |
rpoB | 762338 | c.2532T>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 762347 | c.2541T>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 762350 | c.2544C>G | synonymous_variant | 1.0 | rifampicin | |
rpoB | 762353 | c.2547C>T | synonymous_variant | 1.0 | rifampicin | |
rpoB | 762362 | p.Glu852Asp | missense_variant | 1.0 | rifampicin | |
rpoB | 762369 | c.2563T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 762374 | c.-996G>C | upstream_gene_variant | 1.0 | rifampicin | |
rpoC | 762395 | c.-975G>C | upstream_gene_variant | 1.0 | rifampicin | |
rpoC | 762398 | c.-972T>C | upstream_gene_variant | 1.0 | rifampicin | |
rpoB | 762404 | c.2598T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762416 | c.2610A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 762434 | c.-936T>C | upstream_gene_variant | 1.0 | rifampicin | |
rpoC | 762443 | c.-927G>C | upstream_gene_variant | 1.0 | rifampicin | |
rpoB | 762449 | c.2643C>A | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762452 | c.2646G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762470 | c.2664G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762491 | c.2685T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 762503 | c.-867G>A | upstream_gene_variant | 1.0 | rifampicin | |
rpoB | 762510 | p.Ala902Pro | missense_variant | 1.0 | rifampicin | Uncertain significance |
rpoC | 762521 | c.-849C>G | upstream_gene_variant | 1.0 | rifampicin | |
rpoC | 762527 | c.-843G>C | upstream_gene_variant | 1.0 | rifampicin | |
rpoC | 762533 | c.-837T>C | upstream_gene_variant | 1.0 | rifampicin | |
rpoC | 762536 | c.-834T>C | upstream_gene_variant | 1.0 | rifampicin | |
rpoC | 762537 | c.-833_-831delTTGinsCTC | upstream_gene_variant | 1.0 | rifampicin | |
rpoC | 762551 | c.-819C>T | upstream_gene_variant | 1.0 | rifampicin | |
rpoB | 762857 | c.3051C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762863 | c.3057T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762879 | p.Met1025Leu | missense_variant | 1.0 | rifampicin | Uncertain significance |
rpoC | 762896 | c.-474G>C | upstream_gene_variant | 1.0 | rifampicin | |
rpoC | 762920 | c.-450C>G | upstream_gene_variant | 1.0 | rifampicin | |
rpoB | 762929 | c.3123G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762995 | c.3189G>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 763028 | c.3222T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 763031 | c.3225T>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 763034 | c.3228C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 763040 | c.3234C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 763070 | c.3264T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 763085 | c.3279C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 763115 | c.3309T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 763127 | c.3321G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 763166 | c.3360A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763169 | c.-201A>G | upstream_gene_variant | 1.0 | rifampicin | |
rpoC | 763179 | c.-191C>T | upstream_gene_variant | 1.0 | rifampicin | |
rpoC | 763202 | c.-168A>G | upstream_gene_variant | 1.0 | rifampicin | |
rpoB | 763214 | c.3408T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763217 | c.-153G>C | upstream_gene_variant | 1.0 | rifampicin | |
rpoC | 763226 | c.-144A>G | upstream_gene_variant | 1.0 | rifampicin | |
rpoB | 763227 | p.Leu1141Met | missense_variant | 1.0 | rifampicin | |
rpoC | 763396 | c.27A>G | synonymous_variant | 0.94 | rifampicin | Not assoc w R - Interim |
rpoC | 763402 | c.33C>A | synonymous_variant | 0.94 | rifampicin | |
rpoC | 763408 | c.39T>C | synonymous_variant | 0.94 | rifampicin | Not assoc w R - Interim |
rpoC | 763414 | c.45T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763420 | c.51G>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763423 | p.Glu18Asp | missense_variant | 1.0 | rifampicin | Uncertain significance |
rpoC | 763430 | c.61_63delAGGinsCGT | synonymous_variant | 0.94 | rifampicin | |
rpoC | 763435 | c.66A>G | synonymous_variant | 0.94 | rifampicin | Not assoc w R - Interim |
rpoC | 763439 | c.70_71delTCinsAG | synonymous_variant | 0.94 | rifampicin | |
rpoC | 763444 | c.75T>C | synonymous_variant | 0.95 | rifampicin | Not assoc w R - Interim |
rpoC | 763456 | c.87A>G | synonymous_variant | 0.96 | rifampicin | Not assoc w R - Interim |
rpoC | 763468 | c.99G>C | synonymous_variant | 0.96 | rifampicin | Not assoc w R - Interim |
rpoC | 763483 | c.114G>A | synonymous_variant | 0.95 | rifampicin | |
rpoC | 763484 | c.115_117delCTTinsTTG | synonymous_variant | 0.95 | rifampicin | |
rpoC | 763528 | c.159G>A | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763546 | c.177A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763570 | c.201G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763573 | c.204G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763615 | c.246G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763618 | c.249C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763621 | c.252C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763636 | c.267T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763660 | c.291T>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763669 | c.300C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763675 | c.306C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763696 | c.327T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763699 | c.330G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763702 | c.333C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763709 | c.340C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763714 | c.345G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763717 | c.348T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763723 | c.354G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763729 | c.360G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763732 | c.363C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763741 | c.372C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763744 | c.375G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763765 | c.396T>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763774 | c.405G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763781 | p.Ser138Glu | missense_variant | 1.0 | rifampicin | |
rpoC | 763792 | p.Glu141Asp | missense_variant | 1.0 | rifampicin | |
rpoC | 763801 | c.432C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763807 | c.438T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763813 | c.444C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763816 | c.447C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763987 | c.618C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763991 | p.Ile208Leu | missense_variant | 1.0 | rifampicin | |
rpoC | 763996 | c.627T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764002 | c.633C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764005 | c.636G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764024 | c.655_657delTTGinsCTC | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764032 | p.Asp221Glu | missense_variant | 1.0 | rifampicin | |
rpoC | 764040 | p.Ser224Asn | missense_variant | 1.0 | rifampicin | |
rpoC | 764044 | c.675T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764059 | c.690G>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764083 | c.714A>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764084 | p.Asn239Val | missense_variant | 1.0 | rifampicin | |
rpoC | 764098 | c.729A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764126 | p.Thr253Gln | missense_variant | 1.0 | rifampicin | |
rpoC | 764131 | c.762T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764153 | p.Gln262Lys | missense_variant | 1.0 | rifampicin | |
rpoC | 764161 | c.792G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764188 | c.819A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764203 | c.834G>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764206 | p.Asp279Glu | missense_variant | 1.0 | rifampicin | |
rpoC | 764215 | c.846A>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764242 | c.873C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764263 | c.894G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764269 | c.900G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764278 | c.909A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764314 | c.945C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764317 | c.948C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764320 | c.951C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764338 | c.969G>A | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764365 | c.996C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764383 | c.1014C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764387 | c.1018T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764405 | c.1036_1038delAGGinsCGC | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764428 | c.1059G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764431 | c.1062G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764434 | c.1065A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764446 | c.1077T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764449 | c.1080G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764452 | c.1083T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764458 | c.1089G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764461 | c.1092A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764497 | c.1128A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764500 | c.1131C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764506 | c.1137C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764521 | c.1152T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764536 | c.1167G>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764539 | c.1170C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764548 | c.1179G>A | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764566 | c.1197C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764575 | c.1206T>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764611 | c.1242G>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764626 | c.1257C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764632 | c.1263T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764644 | c.1275G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764650 | c.1281G>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764701 | c.1332C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764746 | c.1377G>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764752 | c.1383G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764758 | c.1389C>G | synonymous_variant | 0.97 | rifampicin | Not assoc w R - Interim |
rpoC | 764764 | c.1395T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764791 | c.1422C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764803 | c.1434C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764809 | c.1440C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R |
rpoC | 764812 | c.1443C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764815 | c.1446A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764824 | c.1455T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764827 | c.1458G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764858 | c.1489T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764869 | c.1500C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764878 | c.1509C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764887 | c.1518G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764888 | c.1519T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764893 | c.1524T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764911 | c.1542A>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764912 | p.Met515Gln | missense_variant | 1.0 | rifampicin | Uncertain significance |
rpoC | 764923 | c.1554A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764932 | c.1563C>A | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764948 | c.1579T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764968 | c.1599T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764995 | c.1626C>A | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765007 | c.1638T>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765008 | c.1639T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765019 | c.1650A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765022 | c.1653G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765404 | p.Leu679Val | missense_variant | 1.0 | rifampicin | |
rpoC | 765407 | p.Gly680Ser | missense_variant | 1.0 | rifampicin | |
rpoC | 765412 | c.2043T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765419 | p.Val684Ile | missense_variant | 1.0 | rifampicin | Uncertain significance |
rpoC | 765425 | p.Lys686Gln | missense_variant | 1.0 | rifampicin | |
rpoC | 765451 | c.2082C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765454 | c.2085C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765466 | c.2097C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765469 | c.2100G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765478 | c.2109T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765481 | c.2112C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765499 | c.2130C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765508 | c.2139C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765517 | c.2148C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765524 | p.Ala719Thr | missense_variant | 1.0 | rifampicin | |
rpoC | 765772 | c.2403C>G | synonymous_variant | 0.9 | rifampicin | |
rpoC | 765784 | c.2415C>G | synonymous_variant | 0.92 | rifampicin | |
rpoC | 765793 | c.2424C>G | synonymous_variant | 0.93 | rifampicin | |
rpoC | 765796 | c.2427C>T | synonymous_variant | 0.93 | rifampicin | |
rpoC | 765811 | c.2442T>G | synonymous_variant | 0.9 | rifampicin | |
rpoC | 765814 | c.2445A>C | synonymous_variant | 0.91 | rifampicin | |
rpoC | 765823 | c.2454C>A | synonymous_variant | 0.91 | rifampicin | Not assoc w R - Interim |
rpoC | 765826 | c.2457T>C | synonymous_variant | 0.91 | rifampicin | Not assoc w R - Interim |
rpoC | 765835 | c.2466C>T | synonymous_variant | 0.92 | rifampicin | Not assoc w R - Interim |
rpoC | 765875 | p.Val836Ile | missense_variant | 0.96 | rifampicin | Uncertain significance |
rpoC | 765886 | c.2517C>G | synonymous_variant | 0.96 | rifampicin | |
rpoC | 765904 | c.2535C>G | synonymous_variant | 0.95 | rifampicin | Not assoc w R - Interim |
rpoC | 765937 | c.2568T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765946 | c.2577C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765947 | c.2578T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765961 | c.2592G>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765962 | c.2593_2595delTTGinsCTT | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765967 | c.2598C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765973 | c.2604C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765979 | c.2610C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765982 | c.2613C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765994 | c.2625A>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 766309 | c.2940G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 766315 | c.2946C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766321 | c.2952C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766345 | c.2976T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766348 | c.2979A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 766351 | c.2982C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766363 | c.2994G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766369 | c.3000C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766384 | c.3015A>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766393 | c.3024C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766423 | c.3054T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766426 | c.3057C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766429 | c.3060C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766447 | c.3078T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766459 | c.3090G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766483 | c.3114G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766486 | c.3117A>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766492 | c.3123T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766493 | p.Gly1042Asn | missense_variant | 1.0 | rifampicin | |
rpoC | 766714 | c.3345G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766717 | c.3348C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766726 | c.3357T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766738 | c.3369G>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766741 | c.3372G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766765 | c.3396A>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 766771 | c.3402G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766774 | c.3405T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766775 | p.Arg1136Lys | missense_variant | 1.0 | rifampicin | |
rpoC | 766789 | c.3420G>A | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 766801 | c.3432C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766804 | c.3435A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 766843 | c.3474T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 766931 | p.Ala1188Thr | missense_variant | 1.0 | rifampicin | Uncertain significance |
rpoC | 766942 | c.3573C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 766945 | c.3576A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 766951 | c.3582G>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766963 | c.3594T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 766978 | c.3609C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766981 | c.3612T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766996 | c.3627C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 767086 | c.3717C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 767098 | c.3729T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 767104 | c.3735C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 767105 | p.Asn1246Gln | missense_variant | 1.0 | rifampicin | Uncertain significance |
rpoC | 767119 | c.3750A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
mmpL5 | 775856 | c.2625T>C | synonymous_variant | 0.91 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775865 | c.2616T>C | synonymous_variant | 0.92 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775874 | c.2607C>G | synonymous_variant | 0.65 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775885 | p.Ile866Leu | missense_variant | 0.79 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775886 | c.2595A>G | synonymous_variant | 0.91 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775892 | p.His863Pro | missense_variant | 0.45 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775909 | p.Leu858Phe | missense_variant | 1.0 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775910 | c.2571G>C | synonymous_variant | 0.86 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775915 | p.Ala856Ser | missense_variant | 0.62 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775916 | c.2565T>G | synonymous_variant | 1.0 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775937 | c.2544G>C | synonymous_variant | 0.36 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775943 | c.2538C>G | synonymous_variant | 0.57 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775946 | c.2535C>G | synonymous_variant | 1.0 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775951 | c.2530C>T | synonymous_variant | 1.0 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775961 | c.2520C>G | synonymous_variant | 0.73 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 776053 | c.2428T>C | synonymous_variant | 1.0 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 776078 | c.2403C>G | synonymous_variant | 1.0 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 776100 | p.Thr794Ile | missense_variant | 1.0 | bedaquiline | Not assoc w R - Interim |
clofazimine | Not assoc w R | |||||
mmpL5 | 776104 | p.Ile793Leu | missense_variant | 1.0 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 777158 | c.1323C>G | synonymous_variant | 0.92 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 777162 | p.Gln440Pro | missense_variant | 0.92 | bedaquiline | |
clofazimine | ||||||
rpsL | 781616 | c.57C>G | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781628 | c.69T>C | synonymous_variant | 1.0 | streptomycin | Not assoc w R - Interim |
rpsL | 781631 | c.72G>C | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781649 | c.90T>G | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781652 | c.93T>C | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781658 | c.99A>G | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781682 | c.123T>C | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781709 | c.150G>C | synonymous_variant | 1.0 | streptomycin | Not assoc w R - Interim |
rpsL | 781715 | c.156T>G | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781724 | c.165G>C | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781728 | c.169T>C | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781736 | c.177T>C | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781742 | c.183C>T | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781754 | c.195G>T | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781760 | c.201T>C | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781763 | c.204C>G | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781769 | c.210G>A | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781805 | c.246G>C | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781811 | c.252C>T | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781817 | c.258G>T | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781832 | c.273T>C | synonymous_variant | 0.98 | streptomycin | |
rpsL | 781859 | c.300T>C | synonymous_variant | 0.97 | streptomycin | Not assoc w R - Interim |
rpsL | 781865 | c.306G>C | synonymous_variant | 0.97 | streptomycin | |
rpsL | 781868 | c.309T>C | synonymous_variant | 0.96 | streptomycin | |
rpsL | 781871 | c.312G>C | synonymous_variant | 0.96 | streptomycin | |
rpsL | 781877 | c.318T>C | synonymous_variant | 0.96 | streptomycin | |
rpsL | 781880 | c.321C>G | synonymous_variant | 0.96 | streptomycin | |
rpsL | 781892 | c.333A>G | synonymous_variant | 0.97 | streptomycin | |
rpsL | 781898 | c.339A>G | synonymous_variant | 0.97 | streptomycin | |
rpsL | 781907 | c.348T>C | synonymous_variant | 0.95 | streptomycin | |
rpsL | 781916 | c.357T>G | synonymous_variant | 0.95 | streptomycin | |
rpsL | 781929 | p.Gly124Ser | missense_variant | 0.94 | streptomycin | Uncertain significance |
rplC | 800612 | c.-197A>G | upstream_gene_variant | 1.0 | linezolid | |
rplC | 800618 | c.-191T>C | upstream_gene_variant | 1.0 | linezolid | |
rplC | 800643 | c.-166_-164delCGCinsAGG | upstream_gene_variant | 1.0 | linezolid | |
rplC | 800648 | c.-161A>C | upstream_gene_variant | 1.0 | linezolid | |
rplC | 800693 | c.-116A>G | upstream_gene_variant | 1.0 | linezolid | |
rplC | 800703 | c.-106T>C | upstream_gene_variant | 1.0 | linezolid | |
rplC | 800715 | c.-94A>C | upstream_gene_variant | 1.0 | linezolid | |
rplC | 800720 | c.-89T>C | upstream_gene_variant | 1.0 | linezolid | |
rplC | 800723 | c.-86C>G | upstream_gene_variant | 1.0 | linezolid | |
rplC | 800744 | c.-65G>T | upstream_gene_variant | 1.0 | linezolid | |
rplC | 800759 | c.-50C>T | upstream_gene_variant | 1.0 | linezolid | |
rplC | 800762 | c.-47T>G | upstream_gene_variant | 1.0 | linezolid | |
fbiC | 1304559 | p.Glu543Asp | missense_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304565 | c.1635C>G | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304568 | c.1638T>C | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304574 | c.1644C>G | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304580 | c.1650T>C | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304613 | c.1683T>A | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304619 | c.1689G>C | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304637 | c.1707G>A | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304640 | c.1710A>C | synonymous_variant | 1.0 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
atpE | 1460816 | c.-229T>C | upstream_gene_variant | 1.0 | bedaquiline | |
atpE | 1461146 | c.102G>A | synonymous_variant | 1.0 | bedaquiline | |
atpE | 1461149 | c.105T>G | synonymous_variant | 1.0 | bedaquiline | |
atpE | 1461159 | p.Val39Ile | missense_variant | 1.0 | bedaquiline | Uncertain significance |
atpE | 1461170 | c.126A>G | synonymous_variant | 1.0 | bedaquiline | |
atpE | 1461173 | c.129C>G | synonymous_variant | 1.0 | bedaquiline | |
atpE | 1461182 | c.138A>G | synonymous_variant | 1.0 | bedaquiline | |
atpE | 1461185 | c.141G>T | synonymous_variant | 1.0 | bedaquiline | |
atpE | 1461188 | c.144G>A | synonymous_variant | 1.0 | bedaquiline | |
rrs | 1471918 | n.73A>T | non_coding_transcript_exon_variant | 1.0 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1471923 | n.78T>C | non_coding_transcript_exon_variant | 1.0 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1471925 | n.80T>C | non_coding_transcript_exon_variant | 1.0 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1471926 | n.81C>T | non_coding_transcript_exon_variant | 1.0 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1471932 | n.87A>G | non_coding_transcript_exon_variant | 1.0 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrs | 1471934 | n.89A>G | non_coding_transcript_exon_variant | 1.0 | kanamycin | |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1471938 | n.93T>A | non_coding_transcript_exon_variant | 1.0 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1471986 | n.141C>T | non_coding_transcript_exon_variant | 1.0 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472061 | n.216A>T | non_coding_transcript_exon_variant | 1.0 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1472075 | n.230A>G | non_coding_transcript_exon_variant | 1.0 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1472108 | n.263C>T | non_coding_transcript_exon_variant | 1.0 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472251 | n.406G>A | non_coding_transcript_exon_variant | 1.0 | kanamycin | Uncertain significance |
capreomycin | Not assoc w R | |||||
streptomycin | Uncertain significance | |||||
amikacin | Not assoc w R | |||||
rrs | 1472326 | n.481T>C | non_coding_transcript_exon_variant | 1.0 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrs | 1472328 | n.483G>T | non_coding_transcript_exon_variant | 1.0 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrs | 1472438 | n.593T>C | non_coding_transcript_exon_variant | 1.0 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472446 | n.601T>A | non_coding_transcript_exon_variant | 1.0 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1472452 | n.607G>A | non_coding_transcript_exon_variant | 1.0 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1472453 | n.608G>A | non_coding_transcript_exon_variant | 1.0 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrs | 1472456 | n.611T>C | non_coding_transcript_exon_variant | 1.0 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrs | 1472459 | n.614C>T | non_coding_transcript_exon_variant | 1.0 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrs | 1472464 | n.619A>G | non_coding_transcript_exon_variant | 1.0 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472489 | n.644A>G | non_coding_transcript_exon_variant | 1.0 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472847 | n.1002G>C | non_coding_transcript_exon_variant | 1.0 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1472848 | n.1003T>G | non_coding_transcript_exon_variant | 1.0 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrs | 1472849 | n.1004C>G | non_coding_transcript_exon_variant | 1.0 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1472850 | n.1005T>C | non_coding_transcript_exon_variant | 1.0 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472857 | n.1012A>G | non_coding_transcript_exon_variant | 1.0 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472858 | n.1013G>T | non_coding_transcript_exon_variant | 1.0 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472859 | n.1014G>C | non_coding_transcript_exon_variant | 1.0 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrs | 1472860 | n.1015C>G | non_coding_transcript_exon_variant | 1.0 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1472973 | n.1128A>T | non_coding_transcript_exon_variant | 1.0 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1473104 | n.1259C>T | non_coding_transcript_exon_variant | 0.99 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473110 | n.1265T>G | non_coding_transcript_exon_variant | 0.99 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473111 | n.1266A>G | non_coding_transcript_exon_variant | 0.99 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473123 | n.1278delAinsTT | non_coding_transcript_exon_variant | 0.99 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrs | 1473276 | n.1431A>G | non_coding_transcript_exon_variant | 1.0 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473301 | n.1456T>C | non_coding_transcript_exon_variant | 1.0 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrl | 1473668 | n.11C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1473696 | n.39T>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1473697 | n.40C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1473743 | n.86C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1473770 | n.113T>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1473788 | n.131A>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1473791 | n.134A>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474140 | n.483C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474151 | n.494C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474174 | n.517A>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474181 | n.524C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474185 | n.528G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474186 | n.529A>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474282 | n.625G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474287 | n.630T>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474290 | n.633T>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474293 | n.637_649delCCTCTCCGGAGGA | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474308 | n.651G>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474310 | n.653T>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474362 | n.705A>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474373 | n.717dupT | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474376 | n.719T>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474446 | n.789C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474496 | n.839C>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474497 | n.840G>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474506 | n.849C>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474507 | n.850G>T | non_coding_transcript_exon_variant | 0.99 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474632 | n.975G>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474636 | n.979A>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474637 | n.980C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474638 | n.981C>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474639 | n.982G>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474709 | n.1053_1056delTGGT | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474717 | n.1060_1061insGTCAT | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474753 | n.1096A>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474760 | n.1103A>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474794 | n.1137C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474812 | n.1155G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474830 | n.1173A>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475031 | n.1374G>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475061 | n.1404C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475202 | n.1545G>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475206 | n.1549C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475209 | n.1552G>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475213 | n.1556C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475297 | n.1640C>G | non_coding_transcript_exon_variant | 0.97 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475315 | n.1658A>T | non_coding_transcript_exon_variant | 0.98 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475355 | n.1698C>T | non_coding_transcript_exon_variant | 0.96 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475363 | n.1706C>T | non_coding_transcript_exon_variant | 0.96 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475366 | n.1709G>A | non_coding_transcript_exon_variant | 0.96 | capreomycin | |
linezolid | ||||||
rrl | 1475369 | n.1712G>T | non_coding_transcript_exon_variant | 0.96 | capreomycin | |
linezolid | ||||||
rrl | 1475378 | n.1721A>T | non_coding_transcript_exon_variant | 0.95 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475379 | n.1722G>C | non_coding_transcript_exon_variant | 0.95 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475380 | n.1723C>A | non_coding_transcript_exon_variant | 0.95 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475409 | n.1752T>C | non_coding_transcript_exon_variant | 0.95 | capreomycin | |
linezolid | ||||||
rrl | 1475419 | n.1762C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475429 | n.1772G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475430 | n.1773T>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1475452 | n.1795C>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475475 | n.1818C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475479 | n.1822C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475526 | n.1869C>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475532 | n.1875A>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475544 | n.1887A>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475545 | n.1888T>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475659 | n.2002G>A | non_coding_transcript_exon_variant | 0.98 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475762 | n.2105G>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475763 | n.2106C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475764 | n.2107A>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475765 | n.2108A>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475884 | n.2227A>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475988 | n.2331A>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | Not assoc w R |
linezolid | Uncertain significance | |||||
rrl | 1475991 | n.2334T>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475995 | n.2338G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476030 | n.2373A>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476032 | n.2375C>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476033 | n.2376T>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476034 | n.2377C>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476044 | n.2387T>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476045 | n.2388G>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476047 | n.2390G>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476049 | n.2392C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476077 | n.2420T>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476088 | n.2431A>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476103 | n.2446C>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476105 | n.2448G>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476106 | n.2449A>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476110 | n.2453G>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476115 | n.2458T>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476119 | n.2462G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476131 | n.2474C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476214 | n.2557G>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476215 | n.2558C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476224 | n.2567A>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476251 | n.2594T>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476252 | n.2595T>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476256 | n.2599A>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476281 | n.2624T>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476529 | n.2872A>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476583 | n.2926G>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476584 | n.2927C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Not assoc w R |
linezolid | Uncertain significance | |||||
rrl | 1476597 | n.2940G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476616 | n.2959A>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476628 | n.2971T>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476664 | n.3007T>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476665 | n.3008T>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476674 | n.3017T>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476679 | n.3022T>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476690 | n.3033C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476691 | n.3034T>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476692 | n.3035T>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476693 | n.3036G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476716 | n.3059A>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476723 | n.3066T>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476731 | n.3074G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476732 | n.3075T>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476741 | n.3084G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476746 | n.3089T>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476747 | n.3090C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476754 | n.3097G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476759 | n.3102T>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476770 | n.3113T>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476771 | n.3114G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
inhA | 1674534 | c.333G>T | synonymous_variant | 1.0 | isoniazid | |
ethionamide | ||||||
inhA | 1674539 | p.Tyr113Phe | missense_variant | 1.0 | isoniazid | |
ethionamide | ||||||
inhA | 1674542 | p.Ala114Glu | missense_variant | 1.0 | isoniazid | |
ethionamide | ||||||
inhA | 1674546 | c.345T>C | synonymous_variant | 1.0 | isoniazid | |
ethionamide | ||||||
inhA | 1674549 | c.348G>C | synonymous_variant | 1.0 | isoniazid | |
ethionamide | ||||||
inhA | 1674561 | c.360C>T | synonymous_variant | 1.0 | isoniazid | |
ethionamide | ||||||
inhA | 1674576 | c.375T>C | synonymous_variant | 1.0 | isoniazid | |
ethionamide | ||||||
inhA | 1674585 | c.384T>G | synonymous_variant | 1.0 | isoniazid | Not assoc w R - Interim |
ethionamide | Not assoc w R - Interim | |||||
inhA | 1674589 | p.Met130Leu | missense_variant | 1.0 | isoniazid | |
ethionamide | ||||||
inhA | 1674601 | p.Leu134Thr | missense_variant | 1.0 | isoniazid | |
ethionamide | ||||||
inhA | 1674619 | p.Pro140Ser | missense_variant | 1.0 | isoniazid | |
ethionamide | ||||||
inhA | 1674624 | c.423A>C | synonymous_variant | 1.0 | isoniazid | |
ethionamide | ||||||
inhA | 1674627 | c.426T>C | synonymous_variant | 1.0 | isoniazid | |
ethionamide | ||||||
inhA | 1674630 | c.429C>G | synonymous_variant | 1.0 | isoniazid | |
ethionamide | ||||||
inhA | 1674656 | p.Ser152Thr | missense_variant | 1.0 | isoniazid | |
ethionamide | ||||||
inhA | 1674658 | c.457C>A | synonymous_variant | 1.0 | isoniazid | |
ethionamide | ||||||
inhA | 1674669 | c.468G>C | synonymous_variant | 1.0 | isoniazid | |
ethionamide | ||||||
inhA | 1674687 | c.486G>C | synonymous_variant | 1.0 | isoniazid | |
ethionamide | ||||||
inhA | 1674852 | c.651G>C | synonymous_variant | 1.0 | isoniazid | |
ethionamide | ||||||
inhA | 1674858 | c.657G>A | synonymous_variant | 1.0 | isoniazid | |
ethionamide | ||||||
inhA | 1674861 | c.660G>A | synonymous_variant | 1.0 | isoniazid | |
ethionamide | ||||||
inhA | 1674879 | c.678T>A | synonymous_variant | 1.0 | isoniazid | |
ethionamide | ||||||
rpsA | 1833547 | c.6G>A | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833550 | c.9T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833554 | p.Thr5Ser | missense_variant | 1.0 | pyrazinamide | |
rpsA | 1833589 | c.48A>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833595 | c.54T>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833616 | c.75A>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833619 | c.78A>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833628 | c.87G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833634 | c.93G>A | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833661 | c.120A>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833664 | c.123C>A | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833676 | c.135A>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833679 | c.138G>T | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833685 | c.144G>T | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833691 | c.150G>A | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833694 | c.153G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833697 | c.156C>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833709 | c.168C>T | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833727 | c.186G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833733 | c.192C>T | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833734 | p.Ala65Ser | missense_variant | 1.0 | pyrazinamide | |
rpsA | 1833742 | c.201A>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833745 | c.204G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833778 | c.237C>T | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833781 | c.240T>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833790 | c.249T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833793 | c.252C>T | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833811 | c.270G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833829 | c.288A>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833832 | c.291G>A | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833838 | c.297G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833841 | c.300C>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833847 | c.306C>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833856 | c.315A>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833859 | c.318C>T | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833874 | c.333T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833892 | c.351G>A | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833894 | p.Ala118Glu | missense_variant | 1.0 | pyrazinamide | |
rpsA | 1833901 | c.360G>A | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833928 | c.387G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833949 | c.408T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833970 | c.429G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833979 | c.438T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833991 | c.450C>A | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834000 | c.459G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834009 | c.468C>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834012 | c.471G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834015 | c.474G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834021 | c.480C>T | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834030 | c.489C>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834096 | c.555G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834097 | c.556_557delTCinsAG | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834102 | c.561T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834141 | c.600C>T | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834169 | p.Thr210Ala | missense_variant | 1.0 | pyrazinamide | Uncertain significance |
rpsA | 1834177 | c.636A>C | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834189 | c.648G>T | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834195 | c.654G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834234 | c.693G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834240 | c.699T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834249 | c.708T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834261 | c.720A>G | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834264 | c.723G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834294 | c.753G>T | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834303 | c.762T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834306 | c.765T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834321 | c.780C>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834345 | c.804C>T | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834348 | c.807T>C | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834366 | c.825A>G | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834375 | c.834G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834378 | c.837T>C | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834396 | c.855G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834411 | c.870T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834417 | c.876G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834423 | c.882G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834435 | c.894G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834451 | c.910T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834456 | c.915T>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834468 | c.927A>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834483 | c.942G>A | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834489 | c.948T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834501 | c.960G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834522 | c.981C>T | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834528 | c.987T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834546 | c.1005T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834552 | c.1011G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834555 | c.1014T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834573 | c.1032G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834600 | c.1059G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834606 | c.1065C>T | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834609 | c.1068T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834619 | c.1078T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834622 | c.1081_1083delTCGinsAGC | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834633 | c.1092A>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834639 | c.1098T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834654 | c.1113G>A | synonymous_variant | 1.0 | pyrazinamide | |
tsnR | 1853420 | c.-186T>G | upstream_gene_variant | 1.0 | linezolid | |
tsnR | 1853429 | c.-177G>C | upstream_gene_variant | 1.0 | linezolid | |
tsnR | 1853432 | c.-174G>C | upstream_gene_variant | 1.0 | linezolid | |
katG | 2155661 | p.Val151Ile | missense_variant | 1.0 | isoniazid | |
katG | 2155676 | c.436C>A | synonymous_variant | 1.0 | isoniazid | |
katG | 2155691 | c.421T>C | synonymous_variant | 1.0 | isoniazid | |
katG | 2155695 | c.417C>G | synonymous_variant | 1.0 | isoniazid | |
katG | 2155716 | c.396T>C | synonymous_variant | 1.0 | isoniazid | |
katG | 2155722 | c.390G>C | synonymous_variant | 1.0 | isoniazid | |
katG | 2155728 | c.384G>C | synonymous_variant | 1.0 | isoniazid | |
katG | 2155735 | p.Met126Ala | missense_variant | 1.0 | isoniazid | |
katG | 2155740 | p.Gly124Gln | missense_variant | 1.0 | isoniazid | |
katG | 2155758 | c.354C>T | synonymous_variant | 1.0 | isoniazid | |
kasA | 2517941 | c.-174C>G | upstream_gene_variant | 1.0 | isoniazid | |
kasA | 2517965 | c.-150C>G | upstream_gene_variant | 1.0 | isoniazid | |
kasA | 2517974 | c.-141T>C | upstream_gene_variant | 1.0 | isoniazid | |
kasA | 2518174 | c.60A>G | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518183 | c.69G>A | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518190 | p.Ser26Ala | missense_variant | 1.0 | isoniazid | |
kasA | 2518219 | c.105T>C | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518220 | c.106C>T | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518228 | c.114C>A | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518525 | c.411G>C | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518561 | c.447T>C | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518567 | c.453G>T | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518573 | c.459G>C | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518574 | p.Ile154Val | missense_variant | 1.0 | isoniazid | |
kasA | 2518579 | c.465T>C | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518585 | c.471G>A | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518588 | c.474T>C | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518591 | c.477G>T | synonymous_variant | 0.93 | isoniazid | |
kasA | 2518603 | c.489G>C | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518612 | c.498C>G | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518627 | c.513T>C | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518639 | c.525G>T | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518642 | c.528A>G | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518645 | c.531G>C | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518651 | c.537C>G | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518672 | c.558G>C | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518688 | p.Val192Ile | missense_variant | 1.0 | isoniazid | |
kasA | 2518702 | c.588C>T | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518723 | c.609G>A | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518732 | c.618C>G | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518747 | c.633C>G | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518756 | c.642G>C | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518780 | p.Glu222Asp | missense_variant | 1.0 | isoniazid | |
kasA | 2518783 | c.669T>A | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518786 | c.672G>A | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518787 | p.Arg225Gly | missense_variant | 1.0 | isoniazid | |
kasA | 2518792 | c.678C>A | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518795 | c.681C>T | synonymous_variant | 1.0 | isoniazid | |
kasA | 2519059 | c.945G>C | synonymous_variant | 1.0 | isoniazid | |
kasA | 2519062 | c.948T>G | synonymous_variant | 1.0 | isoniazid | |
kasA | 2519068 | c.954C>T | synonymous_variant | 1.0 | isoniazid | |
kasA | 2519072 | p.Ala320Thr | missense_variant | 1.0 | isoniazid | |
kasA | 2519105 | p.Cys331Val | missense_variant | 1.0 | isoniazid | |
kasA | 2519110 | p.Asp332Glu | missense_variant | 1.0 | isoniazid | |
kasA | 2519113 | p.Gln333His | missense_variant | 1.0 | isoniazid | |
kasA | 2519137 | c.1023T>G | synonymous_variant | 1.0 | isoniazid | |
kasA | 2519143 | c.1029G>C | synonymous_variant | 1.0 | isoniazid | |
kasA | 2519152 | c.1038G>C | synonymous_variant | 1.0 | isoniazid | |
kasA | 2519158 | c.1044C>T | synonymous_variant | 1.0 | isoniazid | |
kasA | 2519161 | c.1047G>A | synonymous_variant | 1.0 | isoniazid | |
kasA | 2519164 | c.1050C>G | synonymous_variant | 1.0 | isoniazid | |
kasA | 2519170 | c.1056G>A | synonymous_variant | 1.0 | isoniazid | |
kasA | 2519179 | c.1065G>T | synonymous_variant | 1.0 | isoniazid | |
kasA | 2519185 | c.1071C>G | synonymous_variant | 1.0 | isoniazid | |
kasA | 2519195 | p.Thr361Ser | missense_variant | 1.0 | isoniazid | |
kasA | 2519200 | c.1086G>T | synonymous_variant | 1.0 | isoniazid | |
kasA | 2519215 | c.1101C>A | synonymous_variant | 1.0 | isoniazid | |
Rv2477c | 2782483 | c.1560G>C | synonymous_variant | 1.0 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782495 | p.Asp516Glu | missense_variant | 1.0 | kanamycin | Uncertain significance |
levofloxacin | Uncertain significance | |||||
moxifloxacin | Uncertain significance | |||||
streptomycin | ||||||
rifampicin | Uncertain significance | |||||
ethambutol | ||||||
amikacin | Uncertain significance | |||||
Rv2477c | 2782501 | c.1542T>C | synonymous_variant | 1.0 | kanamycin | Not assoc w R - Interim |
levofloxacin | Not assoc w R - Interim | |||||
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | ||||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | ||||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2783203 | c.840C>G | synonymous_variant | 1.0 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783215 | c.828G>C | synonymous_variant | 1.0 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783218 | c.825C>G | synonymous_variant | 1.0 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783230 | c.813T>C | synonymous_variant | 1.0 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783502 | c.541T>C | synonymous_variant | 1.0 | kanamycin | Not assoc w R - Interim |
levofloxacin | Not assoc w R - Interim | |||||
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2783512 | c.531A>G | synonymous_variant | 1.0 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783520 | c.523T>C | synonymous_variant | 1.0 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
amikacin | ||||||
Rv2477c | 2783527 | c.516A>G | synonymous_variant | 1.0 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783542 | c.501G>C | synonymous_variant | 1.0 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783548 | c.495T>G | synonymous_variant | 1.0 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783551 | c.492G>A | synonymous_variant | 1.0 | kanamycin | Not assoc w R - Interim |
levofloxacin | Not assoc w R - Interim | |||||
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | ||||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2783557 | c.486T>C | synonymous_variant | 1.0 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783563 | c.480A>T | synonymous_variant | 1.0 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783572 | c.471A>G | synonymous_variant | 1.0 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783626 | p.Ala139Ser | missense_variant | 1.0 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783659 | c.384A>G | synonymous_variant | 1.0 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783662 | c.381G>A | synonymous_variant | 0.93 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783665 | c.378A>G | synonymous_variant | 0.93 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783668 | c.375G>T | synonymous_variant | 1.0 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783674 | c.369T>C | synonymous_variant | 1.0 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783683 | c.360A>G | synonymous_variant | 1.0 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783691 | c.352C>T | synonymous_variant | 1.0 | kanamycin | Not assoc w R - Interim |
levofloxacin | Not assoc w R - Interim | |||||
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2783695 | c.348C>T | synonymous_variant | 1.0 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783700 | p.Thr115Ser | missense_variant | 1.0 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783797 | p.Asp82Glu | missense_variant | 1.0 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783815 | c.228A>G | synonymous_variant | 1.0 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
thyX | 3067325 | c.621A>G | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067331 | c.615C>T | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067337 | p.His203Gln | missense_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067340 | c.606G>A | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067349 | c.597G>C | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067355 | c.591A>G | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067379 | c.567C>T | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067394 | c.552G>C | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067406 | c.540A>G | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067412 | c.534C>A | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067415 | c.531C>T | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067427 | c.519G>C | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyA | 3073896 | c.576C>G | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyA | 3073902 | c.570C>G | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyA | 3073905 | c.567C>G | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyA | 3073925 | c.547T>C | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyA | 3073929 | c.543T>C | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyA | 3073953 | c.519T>G | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyA | 3073956 | c.516G>C | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyA | 3073959 | c.513T>C | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyA | 3073977 | c.495A>G | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyA | 3073983 | c.489C>G | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyA | 3073992 | c.478_480delAGCinsTCG | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyA | 3073995 | c.477G>C | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyA | 3074000 | c.472C>A | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyA | 3074004 | c.468T>C | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
mtrB | 3625648 | p.Tyr322His | missense_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625656 | c.958T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
bedaquiline | Not assoc w R - Interim | |||||
lpqB | 3625663 | c.-753G>C | upstream_gene_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625678 | c.-768C>G | upstream_gene_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625687 | c.-777G>C | upstream_gene_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625690 | c.-780T>C | upstream_gene_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625723 | c.-813C>G | upstream_gene_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625729 | c.885A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3625747 | c.867G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3625755 | p.Ala287Thr | missense_variant | 1.0 | rifampicin | Uncertain significance |
bedaquiline | ||||||
mtrB | 3625762 | c.852A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3625765 | p.Ser283Gln | missense_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625798 | c.-888G>C | upstream_gene_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625806 | c.808A>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
lpqB | 3625807 | c.-897C>A | upstream_gene_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625837 | c.777C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
lpqB | 3625840 | c.-930A>G | upstream_gene_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625845 | p.Ser257Ala | missense_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625846 | c.-936G>C | upstream_gene_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625849 | c.-939T>C | upstream_gene_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625852 | c.-942A>T | upstream_gene_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625855 | p.Glu253Asp | missense_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625864 | c.750T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3625867 | c.747A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrA | 3626723 | c.627C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3626732 | c.-119A>G | upstream_gene_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
mtrA | 3626749 | c.601C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
bedaquiline | Not assoc w R - Interim | |||||
mtrB | 3626753 | c.-140G>A | upstream_gene_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626773 | c.-160C>T | upstream_gene_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626776 | c.-163A>C | upstream_gene_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626780 | c.-167T>C | upstream_gene_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
mtrA | 3626786 | c.564A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3626795 | c.-182C>T | upstream_gene_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627158 | c.-545C>G | upstream_gene_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627167 | c.-554T>C | upstream_gene_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
mtrA | 3627187 | c.163T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3627188 | c.-577_-575delTTAinsCTG | upstream_gene_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627191 | c.-578G>C | upstream_gene_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627203 | c.-590C>G | upstream_gene_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627212 | c.-599C>T | upstream_gene_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627218 | c.-605G>T | upstream_gene_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627224 | c.-611G>C | upstream_gene_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627227 | c.-614T>G | upstream_gene_variant | 1.0 | rifampicin | |
bedaquiline | ||||||
rpoA | 3877593 | c.915C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3877638 | c.870T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3877656 | c.852T>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3877662 | c.846C>T | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3877668 | c.840A>G | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3877671 | c.837C>G | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3877677 | c.831G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3877680 | c.828G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3877683 | c.825G>C | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3877695 | c.813C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3877704 | c.804G>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3877728 | c.780C>G | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3877740 | c.768G>C | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3877743 | c.765T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3877749 | c.759C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3877764 | c.744C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3877770 | c.738A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3877776 | c.732T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3877782 | c.726T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3877785 | c.723C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3877803 | c.705G>C | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3877818 | c.690A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3877839 | c.669G>C | synonymous_variant | 0.92 | rifampicin | Not assoc w R - Interim |
rpoA | 3877857 | c.651G>A | synonymous_variant | 0.96 | rifampicin | |
rpoA | 3877875 | c.633T>G | synonymous_variant | 0.96 | rifampicin | |
rpoA | 3877887 | c.621G>T | synonymous_variant | 0.96 | rifampicin | |
rpoA | 3877893 | c.615C>T | synonymous_variant | 0.95 | rifampicin | Not assoc w R - Interim |
rpoA | 3877898 | p.Pro204Ala | missense_variant | 0.95 | rifampicin | |
rpoA | 3877900 | p.Ser203Thr | missense_variant | 0.95 | rifampicin | |
rpoA | 3877905 | c.603A>G | synonymous_variant | 0.95 | rifampicin | Not assoc w R - Interim |
rpoA | 3877908 | p.Asn200Ser | missense_variant | 0.95 | rifampicin | |
rpoA | 3877920 | c.588G>C | synonymous_variant | 0.96 | rifampicin | Not assoc w R - Interim |
rpoA | 3878070 | c.438T>C | synonymous_variant | 0.9 | rifampicin | |
rpoA | 3878103 | c.405A>G | synonymous_variant | 0.92 | rifampicin | |
rpoA | 3878118 | c.390T>C | synonymous_variant | 0.93 | rifampicin | |
rpoA | 3878127 | c.381G>C | synonymous_variant | 0.94 | rifampicin | |
rpoA | 3878142 | p.Gly122Glu | missense_variant | 0.94 | rifampicin | |
rpoA | 3878157 | c.351C>G | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878160 | c.348C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3878163 | c.345C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3878169 | c.339G>T | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878187 | c.321C>G | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878193 | c.315T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3878197 | p.Glu104Ala | missense_variant | 1.0 | rifampicin | Uncertain significance |
rpoA | 3878199 | c.309T>C | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878217 | c.291A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3878292 | c.216T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3878313 | c.195G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3878331 | c.177A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3878334 | c.174T>A | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878337 | c.171T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3878346 | c.162T>C | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878358 | c.150C>G | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878361 | c.147G>A | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878364 | c.144A>C | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878385 | c.123C>G | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878391 | c.117T>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3878394 | c.114G>T | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878406 | c.102G>T | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3879073 | c.-566A>G | upstream_gene_variant | 1.0 | rifampicin | |
rpoA | 3879079 | c.-572A>C | upstream_gene_variant | 1.0 | rifampicin | |
rpoA | 3879088 | c.-582_-581delCAinsGC | upstream_gene_variant | 1.0 | rifampicin | |
rpoA | 3879094 | c.-587T>C | upstream_gene_variant | 1.0 | rifampicin | |
rpoA | 3879097 | c.-590C>G | upstream_gene_variant | 1.0 | rifampicin | |
rpoA | 3879121 | c.-615_-614delTTinsAG | upstream_gene_variant | 1.0 | rifampicin | |
rpoA | 3879124 | c.-618_-617delTGinsGC | upstream_gene_variant | 1.0 | rifampicin | |
rpoA | 3879127 | c.-620T>C | upstream_gene_variant | 1.0 | rifampicin | |
rpoA | 3879154 | c.-647T>C | upstream_gene_variant | 1.0 | rifampicin | |
rpoA | 3879157 | c.-650C>T | upstream_gene_variant | 1.0 | rifampicin | |
rpoA | 3879160 | c.-653A>G | upstream_gene_variant | 1.0 | rifampicin | |
ddn | 3986619 | c.-225C>A | upstream_gene_variant | 1.0 | pretomanid | |
delamanid | ||||||
ddn | 3986630 | c.-214C>G | upstream_gene_variant | 1.0 | pretomanid | |
delamanid | ||||||
ddn | 3986636 | c.-208C>G | upstream_gene_variant | 1.0 | pretomanid | |
delamanid | ||||||
ddn | 3986654 | c.-190C>G | upstream_gene_variant | 1.0 | pretomanid | |
delamanid | ||||||
ddn | 3986661 | c.-183C>A | upstream_gene_variant | 1.0 | pretomanid | |
delamanid | ||||||
ddn | 3986667 | c.-177_-176delCTinsAC | upstream_gene_variant | 1.0 | pretomanid | |
delamanid | ||||||
ddn | 3986690 | c.-154C>G | upstream_gene_variant | 1.0 | pretomanid | |
delamanid | ||||||
ddn | 3986696 | c.-148G>C | upstream_gene_variant | 1.0 | pretomanid | |
delamanid | ||||||
ddn | 3986699 | c.-145C>G | upstream_gene_variant | 1.0 | pretomanid | |
delamanid | ||||||
clpC1 | 4038278 | c.2427T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038290 | p.Asp805Glu | missense_variant | 1.0 | pyrazinamide | |
clpC1 | 4038293 | c.2412G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038308 | p.Val799Leu | missense_variant | 1.0 | pyrazinamide | |
clpC1 | 4038314 | c.2391T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038317 | c.2388G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038320 | c.2385G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038350 | c.2355C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038356 | c.2349T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038359 | c.2346A>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038368 | c.2337T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038530 | p.Glu725Asp | missense_variant | 1.0 | pyrazinamide | |
clpC1 | 4038536 | c.2169C>T | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038584 | c.2121G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038587 | c.2118C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038596 | c.2109A>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038623 | c.2082A>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038640 | p.Asp689Asn | missense_variant | 1.0 | pyrazinamide | |
clpC1 | 4038647 | c.2058T>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038704 | c.2001T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038713 | c.1992T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038740 | c.1965G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038749 | c.1956C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038755 | c.1950G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038767 | c.1938G>T | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038773 | c.1932T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038782 | c.1923G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038790 | c.1915C>T | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038812 | c.1893T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038815 | c.1890G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038842 | c.1863G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038845 | c.1860G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038848 | c.1857C>T | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038878 | c.1827A>G | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038905 | c.1800A>G | synonymous_variant | 0.81 | pyrazinamide | |
clpC1 | 4038908 | c.1797C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038911 | c.1794G>T | synonymous_variant | 0.81 | pyrazinamide | |
clpC1 | 4038914 | c.1791G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038917 | c.1788C>T | synonymous_variant | 0.87 | pyrazinamide | |
clpC1 | 4038923 | c.1782A>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038929 | c.1776G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038941 | c.1764G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038953 | c.1752A>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038956 | c.1749T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038965 | c.1740T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038971 | c.1734T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038974 | c.1731T>C | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038977 | c.1728G>A | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038986 | p.Asp573Glu | missense_variant | 1.0 | pyrazinamide | |
clpC1 | 4038989 | c.1716T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038997 | c.1708T>C | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039004 | c.1701C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039022 | c.1683A>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039034 | c.1671C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039085 | c.1620A>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039091 | c.1614G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039094 | c.1611C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039097 | c.1608G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039100 | c.1605C>T | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039103 | c.1602T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039106 | c.1599G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039112 | c.1593C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039121 | c.1584T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039136 | c.1569C>T | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039142 | c.1563A>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039145 | c.1560G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039169 | p.Glu512Asp | missense_variant | 1.0 | pyrazinamide | |
clpC1 | 4039172 | c.1533A>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039178 | c.1527G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039183 | c.1522T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039190 | c.1515C>T | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039199 | p.Ala502Glu | missense_variant | 1.0 | pyrazinamide | |
clpC1 | 4039208 | c.1497C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039220 | c.1485G>T | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039226 | c.1479T>C | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039274 | c.1431G>A | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039280 | c.1425G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039286 | c.1419T>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039292 | c.1413C>T | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039295 | c.1410A>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039298 | c.1407T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039310 | c.1395A>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039319 | c.1386T>C | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039322 | c.1383T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039328 | c.1377A>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039338 | p.Thr456Gln | missense_variant | 1.0 | pyrazinamide | |
clpC1 | 4039346 | c.1359G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039352 | c.1353C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039382 | c.1323C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039391 | c.1314T>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039397 | c.1308A>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039408 | c.1297C>A | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039409 | c.1296T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039412 | c.1293T>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039415 | p.Glu430Asp | missense_variant | 1.0 | pyrazinamide | Uncertain significance |
clpC1 | 4039430 | c.1275T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039436 | c.1269G>A | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039442 | c.1263A>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039454 | c.1251A>T | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039481 | c.1224T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039484 | c.1221T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039493 | c.1212C>T | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039553 | c.1152C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039559 | c.1146C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039574 | p.Ala377Ser | missense_variant | 1.0 | pyrazinamide | |
clpC1 | 4039577 | c.1128T>C | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039580 | c.1125C>T | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039589 | c.1116G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039592 | c.1113G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039601 | c.1104G>A | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039616 | c.1089G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039622 | c.1083C>T | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039649 | c.1056G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039652 | c.1053G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039661 | c.1044T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039724 | c.981A>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039742 | c.963C>T | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039748 | c.957G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039751 | c.954A>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039757 | c.948A>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039760 | c.945T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039850 | c.855T>C | synonymous_variant | 0.91 | pyrazinamide | |
clpC1 | 4039865 | c.840T>C | synonymous_variant | 0.93 | pyrazinamide | |
clpC1 | 4039889 | c.816G>C | synonymous_variant | 0.95 | pyrazinamide | |
clpC1 | 4039898 | c.807C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039904 | c.801A>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039931 | c.774T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039934 | c.771G>A | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039937 | c.768G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039943 | c.762G>A | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039946 | c.759A>T | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039952 | c.753T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039979 | c.726C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039988 | c.717C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039997 | c.708C>T | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040009 | c.696C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040018 | c.687G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040021 | c.684A>C | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040024 | c.681A>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040027 | c.678C>T | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040030 | c.675C>G | synonymous_variant | 0.95 | pyrazinamide | |
clpC1 | 4040033 | c.672G>C | synonymous_variant | 0.95 | pyrazinamide | |
clpC1 | 4040036 | c.669C>G | synonymous_variant | 0.95 | pyrazinamide | |
clpC1 | 4040117 | c.588A>G | synonymous_variant | 0.93 | pyrazinamide | |
clpC1 | 4040120 | c.585G>A | synonymous_variant | 0.93 | pyrazinamide | |
clpC1 | 4040138 | c.567G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040411 | c.294T>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040437 | c.268C>T | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040444 | c.261C>T | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040450 | c.255A>G | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040459 | c.246C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040462 | c.243C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040465 | c.240T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040471 | c.234T>C | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040477 | c.228G>T | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040480 | c.225T>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040522 | c.183T>C | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040531 | c.174T>A | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040546 | c.159G>C | synonymous_variant | 1.0 | pyrazinamide | |
panD | 4044700 | c.-419C>A | upstream_gene_variant | 1.0 | pyrazinamide | |
panD | 4044704 | c.-423G>A | upstream_gene_variant | 1.0 | pyrazinamide | |
panD | 4044713 | c.-432G>T | upstream_gene_variant | 1.0 | pyrazinamide | |
glpK | 4138562 | c.1194G>A | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
glpK | 4138580 | c.1176C>T | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
glpK | 4138583 | c.1173G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
glpK | 4138606 | c.1150T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
glpK | 4138607 | c.1149G>A | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
glpK | 4138628 | c.1128T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
glpK | 4138634 | c.1122G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
glpK | 4138643 | c.1113A>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | Not assoc w R - Interim | |||||
streptomycin | ||||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
glpK | 4139588 | c.168G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
glpK | 4139597 | c.159C>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
glpK | 4139601 | p.Arg52Gln | missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
glpK | 4139603 | c.153C>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
glpK | 4139615 | c.141G>A | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | ||||||
isoniazid | Not assoc w R - Interim | |||||
streptomycin | ||||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | ||||||
glpK | 4139621 | c.135G>A | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | ||||||
glpK | 4139627 | c.129G>A | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
isoniazid | Not assoc w R - Interim | |||||
streptomycin | ||||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
glpK | 4139630 | c.126C>T | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
glpK | 4139637 | p.Ala40Gly | missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
glpK | 4139648 | c.108T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
embC | 4240736 | p.Ser292Ala | missense_variant | 1.0 | ethambutol | |
embC | 4240756 | c.894G>C | synonymous_variant | 1.0 | ethambutol | |
embC | 4240765 | c.903C>G | synonymous_variant | 1.0 | ethambutol | |
embC | 4240771 | c.909G>C | synonymous_variant | 1.0 | ethambutol | |
embC | 4240778 | p.His306Asn | missense_variant | 1.0 | ethambutol | |
embC | 4240783 | c.921G>C | synonymous_variant | 1.0 | ethambutol | |
embC | 4240789 | c.927T>C | synonymous_variant | 1.0 | ethambutol | |
embC | 4240807 | c.945C>A | synonymous_variant | 1.0 | ethambutol | |
embC | 4240819 | c.957A>C | synonymous_variant | 1.0 | ethambutol | |
embC | 4240822 | c.960C>G | synonymous_variant | 1.0 | ethambutol | |
embC | 4240831 | c.969T>G | synonymous_variant | 1.0 | ethambutol | |
embB | 4247425 | c.912G>C | synonymous_variant | 1.0 | ethambutol | |
embB | 4247437 | c.924A>G | synonymous_variant | 1.0 | ethambutol | Not assoc w R - Interim |
embB | 4247440 | c.927C>G | synonymous_variant | 1.0 | ethambutol | |
embB | 4247464 | c.951C>G | synonymous_variant | 1.0 | ethambutol | |
embB | 4247476 | c.963C>A | synonymous_variant | 1.0 | ethambutol | |
embB | 4247500 | c.987C>G | synonymous_variant | 1.0 | ethambutol | |
embB | 4247506 | c.993C>G | synonymous_variant | 1.0 | ethambutol | |
embB | 4247512 | c.999T>C | synonymous_variant | 1.0 | ethambutol | |
embB | 4247524 | c.1011G>C | synonymous_variant | 1.0 | ethambutol | |
embB | 4247539 | c.1026T>C | synonymous_variant | 1.0 | ethambutol | |
embB | 4248223 | c.1710G>C | synonymous_variant | 1.0 | ethambutol | |
embB | 4248232 | c.1719G>T | synonymous_variant | 1.0 | ethambutol | |
embB | 4248238 | p.Met575Ile | missense_variant | 1.0 | ethambutol | |
embB | 4248241 | c.1728C>G | synonymous_variant | 1.0 | ethambutol | Not assoc w R - Interim |
embB | 4248242 | p.Val577Ile | missense_variant | 1.0 | ethambutol | |
embB | 4248252 | p.Gly580Ala | missense_variant | 1.0 | ethambutol | |
embB | 4248256 | c.1743C>G | synonymous_variant | 1.0 | ethambutol | |
embB | 4248277 | c.1764G>C | synonymous_variant | 1.0 | ethambutol | |
embB | 4248280 | c.1767C>G | synonymous_variant | 1.0 | ethambutol | |
embB | 4248295 | c.1782C>T | synonymous_variant | 1.0 | ethambutol | |
embB | 4248304 | c.1791G>C | synonymous_variant | 1.0 | ethambutol | |
embB | 4248319 | c.1806A>G | synonymous_variant | 1.0 | ethambutol | |
embB | 4248322 | c.1809G>C | synonymous_variant | 1.0 | ethambutol | |
embB | 4249486 | c.2973T>G | synonymous_variant | 1.0 | ethambutol | |
embB | 4249487 | c.2974T>C | synonymous_variant | 1.0 | ethambutol | |
embB | 4249492 | c.2979C>G | synonymous_variant | 1.0 | ethambutol | |
embB | 4249525 | c.3012T>C | synonymous_variant | 1.0 | ethambutol | Not assoc w R - Interim |
embB | 4249528 | c.3015C>T | synonymous_variant | 1.0 | ethambutol | Not assoc w R - Interim |
embB | 4249529 | p.Ile1006Val | missense_variant | 1.0 | ethambutol | |
embB | 4249532 | p.Ala1007Thr | missense_variant | 1.0 | ethambutol | Uncertain significance |
embB | 4249537 | c.3024A>G | synonymous_variant | 1.0 | ethambutol | |
embB | 4249538 | p.Ile1009Val | missense_variant | 1.0 | ethambutol | |
embB | 4249558 | c.3045A>G | synonymous_variant | 1.0 | ethambutol | |
embB | 4249568 | p.Ser1019Thr | missense_variant | 1.0 | ethambutol | |
embB | 4249573 | c.3060T>G | synonymous_variant | 1.0 | ethambutol | |
embB | 4249581 | p.Leu1023Gln | missense_variant | 1.0 | ethambutol | |
embB | 4249598 | p.Glu1029Gln | missense_variant | 1.0 | ethambutol | |
embB | 4249607 | p.Thr1032Arg | missense_variant | 1.0 | ethambutol | |
embB | 4249615 | c.3102C>T | synonymous_variant | 1.0 | ethambutol | |
embB | 4249618 | c.3105C>T | synonymous_variant | 1.0 | ethambutol | |
embB | 4249627 | c.3114G>C | synonymous_variant | 1.0 | ethambutol | |
embB | 4249631 | p.Thr1040Ser | missense_variant | 1.0 | ethambutol | |
embB | 4249637 | p.Leu1042Val | missense_variant | 1.0 | ethambutol | |
embB | 4249657 | c.3144C>G | synonymous_variant | 1.0 | ethambutol |