Rv3596c - c.1212C>T
Drug resistance types
7 Sensitive
1 RR-TB
44 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| 37 | |
| lineage4.1 | 2 |
| lineage3 | 2 |
| lineage2.2.1 | 8 |
| lineage4;lineage1.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.9 | 7 |
| lineage4.1.2.1 | 9 |
| lineage1.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4 | 1 |
| La1.8.1 | 1 |
| La1.2 | 1 |
| lineage4.3.3 | 2 |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 81 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR158583 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR16097549 | Sensitive | lineage3 | None | SRR1640750 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675502 | Other | None | SRR3675383 | HR-TB | None | SRR3675550 | Other | None | ERR4821053 | Other | lineage3 | None | ERR2446566 | Other | lineage4.1 | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR4819322 | Other | lineage4;lineage1.1 | None | SRR3675558 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR2509673 | Other | lineage2.2.1 | None | SRR5341418 | Other | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR6045952 | HR-TB | None | ERR2693239 | HR-TB | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6046482 | HR-TB | None | SRR6046015 | Other | lineage4.9 | None | ERR278594 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6982196 | Sensitive | None | SRR6046824 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR3077978 | Other | lineage1.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6325447 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR294248 | HR-TB | None | SRR6832787 | RR-TB | lineage2.2.1 | None | DRR034456 | Sensitive | lineage4.9 | None | ERR502889 | Other | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311099 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR067681 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR133986 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4821179 | Other | lineage4.1.2.1 | gb | ERR3439432 | Other | None | ERR3468544 | HR-TB | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR3797016 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797083 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4188350 | HR-TB | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4798406 | HR-TB | None | ERR6358837 | HR-TB | None | ERR5908228 | Other | lineage4.3.3 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR9119096 | Other | lineage4.3.3 | None | ERR8976043 | HR-TB | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR13423544 | Other | lineage4.5 | None |
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