Rv0676c - c.2538C>G
Drug resistance types
13 Sensitive
0 RR-TB
96 HR-TB
4 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
27 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.5 | 1 |
| 91 | |
| lineage4.9;La3 | 1 |
| lineage2 | 2 |
| lineage2.2.1 | 3 |
| lineage2.2 | 3 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4 | 15 |
| lineage4.9 | 7 |
| lineage4.1.2.1 | 1 |
| lineage4.1 | 1 |
| La2 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.8 | 1 |
| La1 | 1 |
| lineage4;lineage3.1 | 1 |
| La1.2 | 1 |
| lineage3.1.2 | 1 |
| lineage3 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1.2 | 2 |
| lineage2.2.1.1 | 1 |
| lineage3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 141 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18213713 | HR-TB | lineage4.5 | None | SRR19304036 | HR-TB | None | SRR19303884 | HR-TB | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR20969677 | HR-TB | lineage2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR25827682 | Other | None | ERR4815604 | HR-TB | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR176778 | HR-TB | None | SRR3675270 | HR-TB | None | ERR176779 | HR-TB | None | SRR3675465 | HR-TB | None | SRR3675222 | Other | None | SRR3675236 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675488 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675501 | HR-TB | None | ERR176740 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675311 | Other | None | ERR176651 | HR-TB | None | ERR212121 | HR-TB | None | SRR3675558 | HR-TB | None | SRR3675574 | HR-TB | None | ERR176751 | HR-TB | None | ERR234659 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3742665 | HR-TB | None | SRR5341456 | Other | None | SRR6046133 | HR-TB | None | SRR5341302 | HR-TB | None | SRR5341470 | HR-TB | None | SRR6046210 | Other | lineage4 | None | SRR6045526 | HR-TB | None | SRR6045555 | HR-TB | None | SRR5341330 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | SRR6044897 | Sensitive | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045053 | Other | None | SRR6045158 | Other | lineage4.9 | None | SRR6046225 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046299 | HR-TB | None | ERR4831117 | HR-TB | None | ERR4830353 | Other | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR502532 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR323039 | HR-TB | None | SRR8217918 | HR-TB | None | ERR323043 | HR-TB | None | ERR323045 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR323053 | HR-TB | None | ERR1034634 | HR-TB | None | ERR11465509 | Sensitive | lineage4.3.4.2.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR11049020 | Other | lineage4.8 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR1063859 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR11465511 | Sensitive | lineage4.3.4.2.1 | None | ERR3283010 | Other | La1 | None | ERR133825 | Sensitive | lineage4 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283021 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR4769521 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797069 | Other | None | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4407463 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4811022 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4800341 | Other | lineage3 | None | ERR4810741 | HR-TB | None | ERR702406 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR702404 | HR-TB | None | ERR4811493 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6866410 | Sensitive | None | ERR6866807 | HR-TB | lineage4 | None | ERR9117709 | HR-TB | None | ERR736865 | HR-TB | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR1173778 | Other | None | SRR10808399 | Sensitive | lineage4 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1172951 | Other | None | SRR1173400 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1169194 | Other | None | SRR1172234 | Other | None | SRR1172310 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1173562 | HR-TB | lineage4 | None | SRR1175074 | MDR-TB | None | SRR1174897 | HR-TB | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1196546 | HR-TB | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1184294 | HR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1196566 | HR-TB | None | SRR12142341 | HR-TB | None | SRR14801749 | Sensitive | None | SRR15368973 | Other | None | SRR12416824 | HR-TB | None |
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