Rv0006 - c.1975C>T
Drug resistance types
12 Sensitive
0 RR-TB
17 HR-TB
22 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
35 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 18 |
| lineage3 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage4 | 12 |
| 25 | |
| lineage4.1.1.2 | 1 |
| lineage4.6.1.2 | 18 |
| lineage5.1.4 | 1 |
| lineage1.2.2.2 | 2 |
| lineage2.2 | 1 |
| La1.2 | 1 |
| lineage4.5 | 1 |
| lineage4.6.1.2;lineage4.4.1.1 | 4 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 86 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675477 | Other | lineage4.9 | None | SRR25827548 | Other | lineage3 | None | SRR26399490 | Sensitive | lineage4.9 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675229 | Other | lineage4 | None | SRR3675234 | Other | None | SRR3675247 | Other | lineage4.9 | None | SRR3675279 | Other | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675387 | Sensitive | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675510 | Other | None | ERR4816964 | Other | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4816656 | HR-TB | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4818536 | Other | lineage4.9 | None | SAMN02381022 | MDR-TB | lineage4.6.1.2 | ug | SRR3675522 | Other | None | SRR3675547 | Other | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4818929 | HR-TB | None | ERR2513283 | Other | lineage5.1.4 | None | ERR038750 | MDR-TB | lineage4.6.1.2 | ug | ERR2693231 | Other | None | ERR4819933 | Other | lineage4.9 | None | SRR5341323 | Sensitive | lineage4 | None | ERR040135 | MDR-TB | lineage4.6.1.2 | ug | ERR2693254 | Other | None | ERR2693230 | Other | None | ERR550693 | MDR-TB | lineage4.6.1.2 | cg | ERR2693257 | Other | None | ERR550694 | MDR-TB | lineage4.6.1.2 | cg | ERR2693232 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR3283024 | Other | None | SRR6044890 | Other | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR1063855 | Other | lineage4 | None | SRR6046225 | HR-TB | None | SRR6046492 | Other | None | ERR323037 | HR-TB | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR1034652 | Other | None | ERR400320 | Sensitive | lineage4 | None | ERR3797061 | Other | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797044 | Other | None | ERR6359069 | Other | lineage4.9 | None | ERR4553674 | MDR-TB | None | ERR4553679 | MDR-TB | None | ERR4553726 | MDR-TB | lineage1.2.2.2 | None | ERR4553900 | MDR-TB | lineage1.2.2.2 | None | ERR4553953 | MDR-TB | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6198317 | Other | La1.2 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR400345 | Other | lineage4 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | SRR1174313 | MDR-TB | lineage4.6.1.2 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736839 | Other | None | SRR1049563 | HR-TB | lineage4.6.1.2;lineage4.4.1.1 | None | SRR1049564 | HR-TB | lineage4.6.1.2;lineage4.4.1.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1173544 | MDR-TB | lineage4.6.1.2 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR9285900 | Sensitive | lineage4.6.1.2 | None | ERR987757 | MDR-TB | lineage4.6.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049651 | MDR-TB | lineage4.6.1.2 | None | SRR1049652 | MDR-TB | lineage4.6.1.2 | None | SRR1062873 | HR-TB | lineage4.6.1.2;lineage4.4.1.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062912 | MDR-TB | lineage4.6.1.2 | None | SRR1140664 | MDR-TB | lineage4.6.1.2 | None | SRR1140691 | HR-TB | lineage4.6.1.2;lineage4.4.1.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None |
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