Rv0006 - c.1975C>T


Drug resistance types
6 Sensitive 0 RR-TB 21 HR-TB 24 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 16 Other
lineage Counts
lineage Count
lineage4.9 18
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage4.6.1.2 16
lineage1.2.2.2 6
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4.4.1.1;lineage4.6.1.2 4
La1.7;lineage4.9 2
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4 1
La1.7;lineage4.2 1
lineage4.9;lineage6.3 1
2
lineage4.5 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La3;lineage4.9 1
lineage2.2 1
lineage3 1
M.canetti;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
spoligotype Counts
spoligotype Count
None 67
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4818929 HR-TB lineage4.9 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR1140664 MDR-TB lineage4.6.1.2 None
ERR4553726 MDR-TB lineage1.2.2.2 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
SRR1049563 HR-TB lineage4.4.1.1;lineage4.6.1.2 None
SRR1062912 MDR-TB lineage4.6.1.2 None
SRR1140691 HR-TB lineage4.4.1.1;lineage4.6.1.2 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR4812155 Other lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR1049564 HR-TB lineage4.4.1.1;lineage4.6.1.2 None
SRR29017414 MDR-TB lineage1.2.2.2 None
SRR23961559 Other La1.7;lineage4.2 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR9285900 Sensitive lineage4.6.1.2 None
ERR4553679 MDR-TB None
ERR4553900 MDR-TB None
ERR4553953 MDR-TB lineage1.2.2.2 None
ERR550693 MDR-TB lineage4.6.1.2 cg
ERR4811031 Sensitive lineage4.5 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR038750 MDR-TB lineage4.6.1.2 ug
SAMN02381022 MDR-TB lineage4.6.1.2 ug
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
SRR1173544 MDR-TB lineage4.6.1.2 None
ERR1063855 Other lineage4.9 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR26399490 Sensitive lineage4.9 None
SRR1062873 HR-TB lineage4.4.1.1;lineage4.6.1.2 None
ERR4815441 HR-TB lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR323037 Other lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR3675387 Other lineage4.9 None
SRR29017210 MDR-TB lineage1.2.2.2 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR29017257 MDR-TB lineage1.2.2.2 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1049651 MDR-TB lineage4.6.1.2 None
SRR25827548 Other lineage3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR4553674 MDR-TB lineage1.2.2.2 None
SRR1049652 MDR-TB lineage4.6.1.2 None
ERR550694 MDR-TB lineage4.6.1.2 cg
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR987757 MDR-TB lineage4.6.1.2 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR040135 MDR-TB lineage4.6.1.2 ug
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1140712 MDR-TB lineage4.6.1.2 None