lineage | Count |
---|---|
52 | |
lineage4 | 9 |
lineage2.2.1 | 4 |
lineage4.9 | 9 |
lineage2.2 | 2 |
lineage2.2.1.1 | 2 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage6.3;lineage2.2.1 | 1 |
lineage4.3.4 | 1 |
lineage4.8 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4;lineage3.1 | 1 |
lineage3 | 1 |
lineage3.1.2 | 1 |
La1 | 1 |
spoligotype | Count |
---|---|
None | 87 |
ID | Drug resistance | Lineage | Country iso2 | ERR6359045 | HR-TB | None | ERR6865502 | Sensitive | lineage4 | None | ERR736865 | HR-TB | None | ERR11050224 | MDR-TB | lineage2.2.1 | None | SRR1175090 | Other | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1174897 | HR-TB | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR13837643 | Other | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR8692905 | HR-TB | None | SRR20970016 | Other | lineage2.2 | None | ERR176643 | HR-TB | None | SRR8692782 | Other | lineage4.9 | None | ERR158583 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675234 | Other | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR176740 | HR-TB | None | ERR176751 | HR-TB | None | ERR212123 | Other | None | ERR4816151 | Other | lineage4.8 | None | SRR3675550 | Other | None | SRR3675571 | HR-TB | None | ERR4816466 | HR-TB | None | SRR5341418 | Other | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR1035138 | MDR-TB | None | ERR2693230 | Other | None | ERR2693231 | Other | None | SRR5341470 | HR-TB | None | SRR6044876 | Sensitive | lineage4 | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6044838 | Other | lineage4.9 | None | SRR6046824 | HR-TB | None | SRR6045399 | Other | None | SRR6046362 | HR-TB | None | SRR6046397 | Other | None | SRR6046482 | HR-TB | None | SRR6046644 | HR-TB | None | ERR2693232 | Other | lineage4.9 | None | SRR6046460 | HR-TB | None | SRR6982440 | MDR-TB | lineage4.3.4.2.1 | None | ERR502889 | Other | None | ERR294266 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | SRR8217918 | HR-TB | None | ERR323039 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR323053 | HR-TB | None | ERR067681 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR133986 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR3283024 | Other | None | ERR3283021 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3797017 | Other | None | ERR3439432 | Other | None | ERR3797015 | HR-TB | None | ERR3797014 | Other | None | ERR405209 | Sensitive | lineage4 | None | ERR3797036 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797061 | Other | None | ERR3797063 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR403298 | HR-TB | lineage4 | None | ERR3797044 | Other | None | ERR4178226 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4769450 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798262 | HR-TB | La1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None |
---|