Rv0006 - c.1716C>G


Drug resistance types
17 Sensitive 10 RR-TB 61 HR-TB 19 MDR-TB 3 Pre-XDR-TB 2 XDR-TB 125 Other
lineage Counts
lineage Count
La1.7;lineage3;lineage4.9;lineage7 1
lineage4.3.3 4
lineage4.9 55
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.6.2.2 5
lineage4.1.2.1 9
lineage3 23
lineage4 4
13
La3;lineage4.9 3
La1.7;M.canetti;lineage4.9 3
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage6.3.1 1
lineage4.4.1.1 2
La2;lineage2.2 1
lineage2.2.2 1
lineage2.2.1 8
lineage4.8 1
lineage2.1;lineage4.9 12
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.6.1.1 1
lineage2.2.1;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3 10
La1.7;lineage4.9 3
lineage4.3.2 1
lineage4.1.3 2
lineage4.1 1
La3;lineage4.8 1
La3;lineage2 1
lineage3;lineage4 1
M.canetti;lineage2.2.2;lineage6.2 2
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.2;lineage4.8.1;lineage4.9 2
M.canetti;lineage2.2 2
lineage1.1.3.1 1
lineage4.9;lineage6.3 4
La1.2.BCG 1
lineage2.1;lineage6.3 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.1.1.2 1
lineage3.1.3 1
lineage4.2;lineage4.9 2
lineage2.2 5
La3;lineage1.1.2 1
lineage4.1.2 1
La1.7;lineage4.9;lineage7 3
La2;lineage4.9 1
La1.2;La1.8.1 1
lineage4.3.2.1 1
lineage5.2 2
lineage4.9;lineage7 2
La1;lineage4.1.2 1
lineage2.1 3
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.7;lineage4.2 1
lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage4.9 2
lineage4.6.3;lineage4.9 1
La3;lineage2.1;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2.1;lineage4.9 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.9 1
lineage3.1.2.1 1
lineage1.2.1.1 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1;lineage4.9 1
lineage4.2.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage1.1.3.2 1
La1.7.1;La1.7.X-unk4;lineage7 1
M.canetti;lineage2.1;lineage6.3 1
spoligotype Counts
spoligotype Count
None 237
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR3806450 Sensitive lineage4.3.3 None
ERR3283018 HR-TB lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786645 Other lineage4.6.2.2 None
SRR7131023 Other lineage4.1.2.1 None
ERR3804149 Other lineage3 None
ERR9786682 Other lineage4.1.2.1 None
SRR26111991 Sensitive lineage3 None
SRR6045053 Other lineage4 None
SRR7496509 Other None
ERR9786671 Other None
ERR9786604 Other None
SRR6789626 Other None
SRR3675236 Other None
ERR4797474 Other lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR3803773 Other lineage3 None
ERR4800341 HR-TB lineage3 None
SRR20632814 Sensitive lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR9787139 Other lineage6.3.1 None
SRR6046046 Other lineage4.9 None
SRR10808482 Other lineage4.4.1.1 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR18910194 HR-TB lineage2.2.2 None
SRR18003019 Other lineage2.2.1 None
SRR6046878 Other lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
SRR5535933 Other lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR9786569 Other lineage4.8 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR1181020 Other lineage2.2.1 None
SRR3675214 Other lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR990545 RR-TB lineage3 None
SRR6045555 Other lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR9786081 Other lineage3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR3803771 Other lineage3 None
SRR6789621 Other lineage4.9 None
SRR3675248 Other lineage4.9 None
SRR7496472 Other lineage4.9 None
ERR3806589 Other lineage3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR3675235 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR9117805 Other lineage4.3.2 None
SRR21732980 Other lineage4.3.3 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR1181289 RR-TB lineage2.2.1 None
SRR10809074 HR-TB lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786079 Other lineage3 None
SRR5341293 Sensitive lineage4.9 None
ERR9786440 Other lineage4.1 None
ERR12015083 Other La3;lineage4.8 None
SRR21689812 Sensitive lineage3 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
ERR502535 Other lineage3;lineage4 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045892 Sensitive lineage4.9 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR9786864 Sensitive lineage4.3.3 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR736856 HR-TB lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR3799593 Sensitive lineage3 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR9786843 Other None
SRR18213713 HR-TB None
ERR212001 HR-TB None
ERR4407463 HR-TB None
SRR28119777 Other lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4818252 HR-TB lineage4.1.1.2 None
ERR9786084 Sensitive lineage3 None
ERR2513121 Sensitive lineage3.1.3 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4798099 HR-TB lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1183049 RR-TB lineage2.2 None
ERR3797069 Other lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR9970980 HR-TB lineage4.1.2 None
SRR20969708 HR-TB lineage2.2 None
ERR6866410 HR-TB lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2184523 Other lineage4.4.1.1 pe
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR15368973 Other lineage4.9 None
SRR6045526 Other lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4769521 RR-TB lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
SRR6045219 HR-TB lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR9786141 Sensitive lineage4.3.3 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR3797043 Sensitive lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR3445502 HR-TB lineage4.9;lineage7 None
SRR3675221 Other lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR3801503 Other lineage4.6.2.2 None
ERR9786089 Other lineage3 None
ERR3804155 Other lineage4.1.2.1 None
ERR9786082 Other lineage3 None
ERR9786694 Other lineage4.1.2.1 None
ERR9119500 MDR-TB lineage5.2 None
ERR9786087 Other lineage3 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR2514707 Sensitive lineage3 gb
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR4769452 Other lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR23961559 Other La1.7;lineage4.2 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR9786078 Other lineage3 None
SRR11662690 HR-TB lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675572 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
ERR234659 HR-TB None
ERR2514692 Other None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR6866807 RR-TB lineage4.9 None
ERR9786085 Other lineage3 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR5341373 Other lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4810624 MDR-TB lineage2.2 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9786076 Other lineage3 None
SRR6045217 Other lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR6866639 HR-TB lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR702406 Other lineage2.1 None
ERR4800102 Sensitive lineage3.1.2.1 None
ERR4814734 Other lineage1.2.1.1 None
SRR20969731 Other lineage2.2.1 None
SRR6044942 HR-TB lineage4.9 None
ERR3283044 Other lineage4 None
SRR6045548 Other lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
SRR16156817 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3806606 Other lineage3 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR9786080 Other lineage3 None
SRR10808805 Other La1;lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR4799513 HR-TB lineage2.2 None
ERR3276142 Sensitive lineage3 nl
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR5341453 Other lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
ERR3803782 Other lineage3 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR7821126 Other lineage1.1.3.2 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR4797184 HR-TB lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR1180137 RR-TB lineage2.2.1 None
SRR12416840 MDR-TB lineage4.9 None
ERR9786711 Other lineage4.6.2.2 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None