lineage | Count |
---|---|
lineage4 | 12 |
lineage4.9 | 27 |
lineage4.8 | 1 |
lineage2.2.1 | 6 |
lineage4.3.3 | 2 |
lineage1.1.1 | 2 |
lineage3 | 3 |
lineage4.2.1 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.3.2.1 | 1 |
La1.3 | 1 |
lineage4.9;La1.3 | 1 |
3 | |
lineage1.2.1 | 1 |
lineage4.4.1.1 | 2 |
lineage4.1.2.1 | 1 |
lineage4.4.1.1.1 | 1 |
La1.8.1 | 1 |
lineage4.6.5 | 1 |
lineage4.4 | 1 |
lineage2.2.2 | 1 |
lineage2.2.1.1 | 1 |
lineage3.1.3 | 1 |
lineage4.3.4 | 1 |
spoligotype | Count |
---|---|
None | 73 |
ID | Drug resistance | Lineage | Country iso2 | ERR4818561 | HR-TB | lineage4 | None | ERR4818536 | Other | lineage4.9 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4819462 | Other | lineage4 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819546 | HR-TB | lineage3 | None | SRR6046141 | Other | lineage4.9 | None | ERR4819910 | Other | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR323108 | HR-TB | lineage4 | None | ERR067712 | HR-TB | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR1063855 | Other | lineage4 | None | ERR11043126 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769424 | Sensitive | lineage4.9 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4796577 | MDR-TB | None | ERR736837 | Other | lineage4.9 | None | ERR6336763 | Sensitive | lineage1.2.1 | None | ERR6359066 | HR-TB | lineage4 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR6359074 | HR-TB | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786705 | Sensitive | lineage4.1.2.1 | None | SRR10272564 | Sensitive | lineage4.4.1.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR1175513 | Other | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4815310 | Other | None | ERR181744 | HR-TB | None | ERR4815550 | Other | lineage4 | None | ERR4814639 | HR-TB | lineage4 | None | ERR216965 | HR-TB | lineage4.9 | None |
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