Run ID: ERR4818583
Sample name:
Date: 01-04-2023 15:38:31
Number of reads: 1913692
Percentage reads mapped: 72.5
Strain: lineage4.3.3
Drug-resistance: Other
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage4 | Euro-American | LAM;T;S;X;H | None | 1.0 |
lineage4.3 | Euro-American (LAM) | mainly-LAM | None | 1.0 |
lineage4.3.3 | Euro-American (LAM) | LAM;T | RD115 | 1.0 |
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
gyrA | 7362 | p.Glu21Gln | missense_variant | 1.0 |
gyrA | 7414 | p.Gly38Glu | missense_variant | 0.11 |
gyrA | 7418 | c.117C>T | synonymous_variant | 0.13 |
gyrA | 7421 | c.120G>C | synonymous_variant | 0.13 |
gyrA | 7427 | c.126G>C | synonymous_variant | 0.12 |
gyrA | 7430 | p.Glu43Asp | missense_variant | 0.12 |
gyrA | 7442 | c.141G>C | synonymous_variant | 0.11 |
gyrA | 7585 | p.Ser95Thr | missense_variant | 1.0 |
gyrA | 8040 | p.Gly247Ser | missense_variant | 1.0 |
gyrA | 9304 | p.Gly668Asp | missense_variant | 1.0 |
rpoB | 761786 | c.1980C>T | synonymous_variant | 1.0 |
rpoB | 762065 | c.2259T>C | synonymous_variant | 0.11 |
rpoB | 762083 | c.2277T>G | synonymous_variant | 0.14 |
rpoB | 762084 | p.Ala760Pro | missense_variant | 0.14 |
rpoB | 762100 | p.Arg765His | missense_variant | 0.18 |
rpoB | 762114 | p.Ile770Val | missense_variant | 0.25 |
rpoB | 762125 | p.Glu773Asp | missense_variant | 0.25 |
rpoB | 762126 | p.Val774Met | missense_variant | 0.24 |
rpoB | 762129 | p.Leu775Ile | missense_variant | 0.25 |
rpoB | 762135 | p.Asp777Ser | missense_variant | 0.24 |
rpoB | 762140 | c.2334G>T | synonymous_variant | 0.24 |
rpoB | 762143 | c.2337T>C | synonymous_variant | 0.23 |
rpoB | 762146 | p.Glu780Asp | missense_variant | 0.24 |
rpoB | 762149 | c.2343G>T | synonymous_variant | 0.24 |
rpoB | 762167 | c.2361T>C | synonymous_variant | 0.29 |
rpoB | 762176 | c.2370T>C | synonymous_variant | 0.23 |
rpoB | 762180 | p.Asp792Pro | missense_variant | 0.23 |
rpoB | 762185 | c.2379G>C | synonymous_variant | 0.22 |
rpoB | 762209 | c.2403C>G | synonymous_variant | 0.18 |
rpoB | 762212 | c.2406G>C | synonymous_variant | 0.19 |
rpoB | 762218 | c.2412T>C | synonymous_variant | 0.22 |
rpoB | 762230 | c.2424G>C | synonymous_variant | 0.2 |
rpoB | 762233 | c.2427G>C | synonymous_variant | 0.17 |
rpoB | 762236 | c.2430G>T | synonymous_variant | 0.2 |
rpoB | 762245 | c.2439G>A | synonymous_variant | 0.15 |
rpoB | 762254 | c.2448T>C | synonymous_variant | 0.14 |
rpoB | 762257 | c.2451C>G | synonymous_variant | 0.12 |
rpoB | 762266 | c.2460T>C | synonymous_variant | 0.12 |
rpoC | 763511 | p.Cys48Gly | missense_variant | 0.12 |
rpoC | 763517 | p.Lys50Gln | missense_variant | 0.13 |
rpoC | 763528 | c.159G>C | synonymous_variant | 0.17 |
rpoC | 763531 | c.162G>C | synonymous_variant | 0.18 |
rpoC | 763534 | c.165T>C | synonymous_variant | 0.17 |
rpoC | 763537 | c.168C>T | synonymous_variant | 0.18 |
rpoC | 763546 | c.177A>G | synonymous_variant | 0.21 |
rpoC | 763550 | p.Tyr61Ala | missense_variant | 0.2 |
rpoC | 763570 | c.201G>T | synonymous_variant | 0.2 |
rpoC | 763573 | c.204G>C | synonymous_variant | 0.2 |
rpoC | 763589 | p.Ile74Val | missense_variant | 0.22 |
rpoC | 763615 | c.246G>C | synonymous_variant | 0.15 |
rpoC | 763618 | c.249C>A | synonymous_variant | 0.16 |
rpoC | 763621 | c.252C>G | synonymous_variant | 0.16 |
rpoC | 763622 | p.Ala85Ser | missense_variant | 0.16 |
rpoC | 763627 | p.Lys86Asn | missense_variant | 0.19 |
rpoC | 763633 | c.264T>C | synonymous_variant | 0.25 |
rpoC | 763642 | c.273G>C | synonymous_variant | 0.28 |
rpoC | 763660 | c.291T>G | synonymous_variant | 0.22 |
rpoC | 763666 | c.297G>A | synonymous_variant | 0.22 |
rpoC | 763669 | c.300C>G | synonymous_variant | 0.21 |
rpoC | 763702 | c.333C>G | synonymous_variant | 0.1 |
rpoC | 763704 | p.Ser112Cys | missense_variant | 0.1 |
rpoC | 763714 | c.345G>C | synonymous_variant | 0.1 |
rpoC | 763723 | c.354G>C | synonymous_variant | 0.11 |
rpoC | 763727 | p.Leu120Ile | missense_variant | 0.11 |
rpoC | 763732 | c.363C>G | synonymous_variant | 0.11 |
rpoC | 763744 | c.375G>C | synonymous_variant | 0.11 |
rpoC | 763751 | p.Ile128Val | missense_variant | 0.11 |
rpoC | 764338 | p.Glu323Asp | missense_variant | 0.17 |
rpoC | 764365 | c.996C>T | synonymous_variant | 0.28 |
rpoC | 764371 | c.1002G>T | synonymous_variant | 0.25 |
rpoC | 764377 | c.1008C>G | synonymous_variant | 0.26 |
rpoC | 764380 | c.1011G>C | synonymous_variant | 0.25 |
rpoC | 764387 | c.1018_1020delTTGinsCTC | synonymous_variant | 0.26 |
rpoC | 764404 | c.1035C>T | synonymous_variant | 0.27 |
rpoC | 764405 | c.1036_1038delAGGinsCGC | synonymous_variant | 0.27 |
rpoC | 764425 | c.1056C>T | synonymous_variant | 0.27 |
rpoC | 764428 | c.1059G>C | synonymous_variant | 0.26 |
rpoC | 764431 | c.1062G>C | synonymous_variant | 0.26 |
rpoC | 764434 | c.1065A>G | synonymous_variant | 0.26 |
rpoC | 764441 | p.Ile358Leu | missense_variant | 0.25 |
rpoC | 764446 | c.1077T>C | synonymous_variant | 0.25 |
rpoC | 764449 | c.1080G>C | synonymous_variant | 0.26 |
rpoC | 764458 | c.1089G>C | synonymous_variant | 0.32 |
rpoC | 764461 | c.1092A>G | synonymous_variant | 0.34 |
rpoC | 764497 | c.1128A>G | synonymous_variant | 0.33 |
rpoC | 764498 | p.Ser377Ala | missense_variant | 0.32 |
rpoC | 764503 | c.1134G>C | synonymous_variant | 0.34 |
rpoC | 764506 | c.1137C>T | synonymous_variant | 0.36 |
rpoC | 764507 | p.Ala380Ser | missense_variant | 0.36 |
rpoC | 764521 | c.1152T>C | synonymous_variant | 0.4 |
rpoC | 764527 | c.1158C>T | synonymous_variant | 0.4 |
rpoC | 764536 | c.1167G>T | synonymous_variant | 0.35 |
rpoC | 764539 | c.1170C>G | synonymous_variant | 0.35 |
rpoC | 764542 | c.1173C>G | synonymous_variant | 0.34 |
rpoC | 764548 | c.1179G>T | synonymous_variant | 0.4 |
rpoC | 764557 | c.1188C>T | synonymous_variant | 0.39 |
rpoC | 764560 | c.1191T>C | synonymous_variant | 0.4 |
rpoC | 764572 | c.1203G>A | synonymous_variant | 0.43 |
rpoC | 764575 | c.1206T>G | synonymous_variant | 0.39 |
rpoC | 764581 | c.1212T>C | synonymous_variant | 0.37 |
rpoC | 764582 | p.Leu405Met | missense_variant | 0.37 |
rpoC | 764611 | c.1242G>T | synonymous_variant | 0.28 |
rpoC | 764632 | c.1263T>C | synonymous_variant | 0.24 |
rpoC | 764650 | c.1281G>T | synonymous_variant | 0.24 |
rpoC | 764668 | c.1299C>T | synonymous_variant | 0.22 |
rpoC | 764677 | c.1308C>G | synonymous_variant | 0.21 |
rpoC | 764681 | p.Leu438Met | missense_variant | 0.2 |
rpoC | 764692 | c.1323C>T | synonymous_variant | 0.16 |
rpoC | 764695 | c.1326T>C | synonymous_variant | 0.15 |
rpoC | 764706 | p.Leu446Gln | missense_variant | 0.14 |
rpoC | 764713 | c.1344G>A | synonymous_variant | 0.15 |
rpoC | 764731 | c.1362G>C | synonymous_variant | 0.12 |
rpoC | 764737 | c.1368G>C | synonymous_variant | 0.14 |
rpoC | 764746 | c.1377G>C | synonymous_variant | 0.14 |
rpoC | 764751 | p.Val461Asp | missense_variant | 0.14 |
rpoC | 764762 | p.His465Tyr | missense_variant | 0.12 |
rpoC | 764769 | p.Gln467Pro | missense_variant | 0.12 |
rpoC | 764995 | c.1626C>G | synonymous_variant | 1.0 |
mmpL5 | 775639 | p.Ile948Val | missense_variant | 1.0 |
rpsL | 781395 | c.-165T>C | upstream_gene_variant | 1.0 |
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 |
rrs | 1471918 | n.73A>G | non_coding_transcript_exon_variant | 0.11 |
rrs | 1472106 | n.261G>A | non_coding_transcript_exon_variant | 0.37 |
rrs | 1472108 | n.263C>T | non_coding_transcript_exon_variant | 0.38 |
rrs | 1472122 | n.277G>A | non_coding_transcript_exon_variant | 0.47 |
rrs | 1472123 | n.278A>G | non_coding_transcript_exon_variant | 0.51 |
rrs | 1472150 | n.305T>A | non_coding_transcript_exon_variant | 0.49 |
rrs | 1472160 | n.315C>T | non_coding_transcript_exon_variant | 0.51 |
rrs | 1472225 | n.380C>T | non_coding_transcript_exon_variant | 0.32 |
rrs | 1472240 | n.395G>A | non_coding_transcript_exon_variant | 0.6 |
rrs | 1472251 | n.406G>C | non_coding_transcript_exon_variant | 0.57 |
rrs | 1472279 | n.434T>G | non_coding_transcript_exon_variant | 0.41 |
rrs | 1472297 | n.453_465delGTCCGGGTTCTCT | non_coding_transcript_exon_variant | 0.45 |
rrs | 1472315 | n.470T>G | non_coding_transcript_exon_variant | 0.46 |
rrs | 1472325 | n.480G>T | non_coding_transcript_exon_variant | 0.52 |
rrs | 1472326 | n.481T>G | non_coding_transcript_exon_variant | 0.52 |
rrs | 1472344 | n.499C>T | non_coding_transcript_exon_variant | 0.56 |
rrs | 1472368 | n.523A>G | non_coding_transcript_exon_variant | 0.59 |
rrs | 1472400 | n.555C>T | non_coding_transcript_exon_variant | 0.33 |
rrs | 1472416 | n.571C>T | non_coding_transcript_exon_variant | 0.13 |
rrs | 1472422 | n.577T>C | non_coding_transcript_exon_variant | 0.13 |
rrs | 1472517 | n.672T>C | non_coding_transcript_exon_variant | 0.14 |
rrs | 1472522 | n.677T>G | non_coding_transcript_exon_variant | 0.15 |
rrs | 1472545 | n.700A>G | non_coding_transcript_exon_variant | 0.28 |
rrs | 1472549 | n.704G>A | non_coding_transcript_exon_variant | 0.33 |
rrs | 1472557 | n.712G>A | non_coding_transcript_exon_variant | 0.45 |
rrs | 1472571 | n.726G>T | non_coding_transcript_exon_variant | 0.49 |
rrs | 1472579 | n.734G>A | non_coding_transcript_exon_variant | 0.51 |
rrs | 1472582 | n.737G>T | non_coding_transcript_exon_variant | 0.51 |
rrs | 1472584 | n.739A>T | non_coding_transcript_exon_variant | 0.51 |
rrs | 1472585 | n.740A>C | non_coding_transcript_exon_variant | 0.51 |
rrs | 1472597 | n.752G>A | non_coding_transcript_exon_variant | 0.57 |
rrs | 1472616 | n.771G>A | non_coding_transcript_exon_variant | 0.61 |
rrs | 1472623 | n.778A>C | non_coding_transcript_exon_variant | 0.57 |
rrs | 1472687 | n.842A>G | non_coding_transcript_exon_variant | 0.75 |
rrs | 1472767 | n.922G>C | non_coding_transcript_exon_variant | 0.7 |
rrs | 1472790 | n.945T>C | non_coding_transcript_exon_variant | 0.71 |
rrs | 1472837 | n.992C>T | non_coding_transcript_exon_variant | 0.54 |
rrs | 1472840 | n.995A>T | non_coding_transcript_exon_variant | 0.53 |
rrs | 1472844 | n.999C>A | non_coding_transcript_exon_variant | 0.53 |
rrs | 1472849 | n.1004C>T | non_coding_transcript_exon_variant | 0.47 |
rrs | 1472850 | n.1005T>C | non_coding_transcript_exon_variant | 0.5 |
rrs | 1472857 | n.1012A>G | non_coding_transcript_exon_variant | 0.55 |
rrs | 1472863 | n.1018T>G | non_coding_transcript_exon_variant | 0.53 |
rrs | 1472866 | n.1021C>T | non_coding_transcript_exon_variant | 0.55 |
rrs | 1472869 | n.1024G>T | non_coding_transcript_exon_variant | 0.57 |
rrs | 1472874 | n.1029C>T | non_coding_transcript_exon_variant | 0.62 |
rrs | 1472875 | n.1030T>G | non_coding_transcript_exon_variant | 0.59 |
rrs | 1472878 | n.1033G>A | non_coding_transcript_exon_variant | 0.53 |
rrs | 1472879 | n.1034T>C | non_coding_transcript_exon_variant | 0.53 |
rrs | 1472880 | n.1035G>A | non_coding_transcript_exon_variant | 0.52 |
rrs | 1472952 | n.1107T>C | non_coding_transcript_exon_variant | 0.53 |
rrs | 1472956 | n.1111T>C | non_coding_transcript_exon_variant | 0.56 |
rrs | 1472957 | n.1112C>A | non_coding_transcript_exon_variant | 0.56 |
rrs | 1472969 | n.1125delC | non_coding_transcript_exon_variant | 0.53 |
rrs | 1472973 | n.1128A>T | non_coding_transcript_exon_variant | 0.52 |
rrs | 1472974 | n.1129A>C | non_coding_transcript_exon_variant | 0.52 |
rrs | 1472975 | n.1130T>G | non_coding_transcript_exon_variant | 0.52 |
rrs | 1472977 | n.1132G>C | non_coding_transcript_exon_variant | 0.53 |
rrs | 1472987 | n.1142G>A | non_coding_transcript_exon_variant | 0.56 |
rrs | 1472989 | n.1144G>T | non_coding_transcript_exon_variant | 0.56 |
rrs | 1472990 | n.1145A>G | non_coding_transcript_exon_variant | 0.56 |
rrs | 1472996 | n.1151T>C | non_coding_transcript_exon_variant | 0.55 |
rrs | 1473004 | n.1159T>C | non_coding_transcript_exon_variant | 0.53 |
rrs | 1473029 | n.1184C>G | non_coding_transcript_exon_variant | 0.59 |
rrs | 1473066 | n.1221A>G | non_coding_transcript_exon_variant | 0.6 |
rrs | 1473091 | n.1246G>A | non_coding_transcript_exon_variant | 0.53 |
rrs | 1473093 | n.1248C>T | non_coding_transcript_exon_variant | 0.52 |
rrs | 1473099 | n.1254T>G | non_coding_transcript_exon_variant | 0.5 |
rrs | 1473100 | n.1255G>C | non_coding_transcript_exon_variant | 0.5 |
rrs | 1473102 | n.1257C>T | non_coding_transcript_exon_variant | 0.5 |
rrs | 1473104 | n.1259C>T | non_coding_transcript_exon_variant | 0.5 |
rrs | 1473109 | n.1264T>G | non_coding_transcript_exon_variant | 0.5 |
rrs | 1473111 | n.1266A>G | non_coding_transcript_exon_variant | 0.5 |
rrs | 1473120 | n.1275C>T | non_coding_transcript_exon_variant | 0.48 |
rrs | 1473121 | n.1276T>C | non_coding_transcript_exon_variant | 0.49 |
rrs | 1473122 | n.1277T>A | non_coding_transcript_exon_variant | 0.49 |
rrs | 1473123 | n.1278A>G | non_coding_transcript_exon_variant | 0.49 |
rrs | 1473145 | n.1300C>T | non_coding_transcript_exon_variant | 0.65 |
rrs | 1473166 | n.1321G>A | non_coding_transcript_exon_variant | 0.59 |
rrs | 1473226 | n.1381C>G | non_coding_transcript_exon_variant | 0.58 |
rrs | 1473276 | n.1431A>G | non_coding_transcript_exon_variant | 0.45 |
rrs | 1473283 | n.1438T>C | non_coding_transcript_exon_variant | 0.42 |
rrs | 1473288 | n.1443C>T | non_coding_transcript_exon_variant | 0.39 |
rrs | 1473290 | n.1445C>T | non_coding_transcript_exon_variant | 0.38 |
rrs | 1473291 | n.1446G>T | non_coding_transcript_exon_variant | 0.38 |
rrs | 1473294 | n.1449A>G | non_coding_transcript_exon_variant | 0.38 |
rrs | 1473301 | n.1456T>C | non_coding_transcript_exon_variant | 0.4 |
rrs | 1473315 | n.1470T>C | non_coding_transcript_exon_variant | 0.37 |
rrs | 1473316 | n.1471C>T | non_coding_transcript_exon_variant | 0.37 |
rrs | 1473319 | n.1474C>T | non_coding_transcript_exon_variant | 0.37 |
rrs | 1473324 | n.1479G>A | non_coding_transcript_exon_variant | 0.37 |
rrl | 1474166 | n.509G>T | non_coding_transcript_exon_variant | 0.36 |
rrl | 1474184 | n.527C>T | non_coding_transcript_exon_variant | 0.27 |
rrl | 1474186 | n.529A>G | non_coding_transcript_exon_variant | 0.31 |
rrl | 1474201 | n.544T>C | non_coding_transcript_exon_variant | 0.4 |
rrl | 1474202 | n.545T>A | non_coding_transcript_exon_variant | 0.4 |
rrl | 1474218 | n.561T>A | non_coding_transcript_exon_variant | 0.56 |
rrl | 1474249 | n.592G>T | non_coding_transcript_exon_variant | 0.52 |
rrl | 1474264 | n.607T>A | non_coding_transcript_exon_variant | 0.4 |
rrl | 1474265 | n.608G>T | non_coding_transcript_exon_variant | 0.4 |
rrl | 1474266 | n.609T>C | non_coding_transcript_exon_variant | 0.4 |
rrl | 1474269 | n.612C>A | non_coding_transcript_exon_variant | 0.35 |
rrl | 1474281 | n.624A>G | non_coding_transcript_exon_variant | 0.31 |
rrl | 1474287 | n.630_631insGC | non_coding_transcript_exon_variant | 0.19 |
rrl | 1474292 | n.635T>G | non_coding_transcript_exon_variant | 0.19 |
rrl | 1474293 | n.637_650delCCTCTCCGGAGGAG | non_coding_transcript_exon_variant | 0.19 |
rrl | 1474310 | n.655dupG | non_coding_transcript_exon_variant | 0.16 |
rrl | 1474316 | n.659T>C | non_coding_transcript_exon_variant | 0.16 |
rrl | 1474348 | n.691C>T | non_coding_transcript_exon_variant | 0.12 |
rrl | 1474467 | n.810A>T | non_coding_transcript_exon_variant | 0.43 |
rrl | 1474476 | n.819C>T | non_coding_transcript_exon_variant | 0.45 |
rrl | 1474496 | n.839C>A | non_coding_transcript_exon_variant | 0.48 |
rrl | 1474497 | n.840G>C | non_coding_transcript_exon_variant | 0.48 |
rrl | 1474506 | n.849C>G | non_coding_transcript_exon_variant | 0.46 |
rrl | 1474507 | n.850G>T | non_coding_transcript_exon_variant | 0.46 |
rrl | 1474527 | n.870T>C | non_coding_transcript_exon_variant | 0.37 |
rrl | 1474528 | n.871T>A | non_coding_transcript_exon_variant | 0.37 |
rrl | 1474529 | n.872A>G | non_coding_transcript_exon_variant | 0.37 |
rrl | 1474535 | n.878A>C | non_coding_transcript_exon_variant | 0.37 |
rrl | 1474537 | n.880G>A | non_coding_transcript_exon_variant | 0.37 |
rrl | 1474540 | n.883T>C | non_coding_transcript_exon_variant | 0.38 |
rrl | 1474541 | n.884G>T | non_coding_transcript_exon_variant | 0.38 |
rrl | 1474542 | n.885A>G | non_coding_transcript_exon_variant | 0.38 |
rrl | 1474558 | n.901G>A | non_coding_transcript_exon_variant | 0.34 |
rrl | 1474582 | n.925T>A | non_coding_transcript_exon_variant | 0.38 |
rrl | 1475699 | n.2042C>A | non_coding_transcript_exon_variant | 0.19 |
rrl | 1475722 | n.2065G>T | non_coding_transcript_exon_variant | 0.29 |
rrl | 1475747 | n.2090A>G | non_coding_transcript_exon_variant | 0.17 |
rrl | 1475752 | n.2095C>G | non_coding_transcript_exon_variant | 0.17 |
rrl | 1475753 | n.2096C>T | non_coding_transcript_exon_variant | 0.17 |
rrl | 1475757 | n.2101_2104delACCC | non_coding_transcript_exon_variant | 0.21 |
rrl | 1475767 | n.2110G>T | non_coding_transcript_exon_variant | 0.21 |
rrl | 1475769 | n.2112T>C | non_coding_transcript_exon_variant | 0.21 |
rrl | 1475772 | n.2115A>G | non_coding_transcript_exon_variant | 0.21 |
rrl | 1475775 | n.2118G>A | non_coding_transcript_exon_variant | 0.21 |
rrl | 1475776 | n.2119G>C | non_coding_transcript_exon_variant | 0.21 |
rrl | 1475777 | n.2120A>T | non_coding_transcript_exon_variant | 0.21 |
rrl | 1475781 | n.2124T>C | non_coding_transcript_exon_variant | 0.2 |
rrl | 1476130 | n.2473G>A | non_coding_transcript_exon_variant | 0.1 |
rrl | 1476141 | n.2484A>G | non_coding_transcript_exon_variant | 0.35 |
rrl | 1476153 | n.2496T>C | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476160 | n.2503T>C | non_coding_transcript_exon_variant | 0.53 |
rrl | 1476165 | n.2508T>G | non_coding_transcript_exon_variant | 0.53 |
rrl | 1476194 | n.2537A>G | non_coding_transcript_exon_variant | 0.57 |
rrl | 1476200 | n.2543A>T | non_coding_transcript_exon_variant | 0.57 |
rrl | 1476201 | n.2544C>T | non_coding_transcript_exon_variant | 0.53 |
rrl | 1476204 | n.2547C>T | non_coding_transcript_exon_variant | 0.53 |
rrl | 1476214 | n.2557G>T | non_coding_transcript_exon_variant | 0.62 |
rrl | 1476215 | n.2558C>T | non_coding_transcript_exon_variant | 0.62 |
rrl | 1476224 | n.2567A>G | non_coding_transcript_exon_variant | 0.53 |
rrl | 1476245 | n.2588C>T | non_coding_transcript_exon_variant | 0.41 |
rrl | 1476251 | n.2594T>A | non_coding_transcript_exon_variant | 0.37 |
rrl | 1476252 | n.2595T>G | non_coding_transcript_exon_variant | 0.33 |
rrl | 1476256 | n.2599A>T | non_coding_transcript_exon_variant | 0.33 |
rrl | 1476260 | n.2603A>G | non_coding_transcript_exon_variant | 0.33 |
rrl | 1476281 | n.2624T>C | non_coding_transcript_exon_variant | 0.2 |
rrl | 1476290 | n.2633C>T | non_coding_transcript_exon_variant | 0.14 |
rrl | 1476359 | n.2702C>T | non_coding_transcript_exon_variant | 0.44 |
rrl | 1476363 | n.2706A>G | non_coding_transcript_exon_variant | 0.42 |
rrl | 1476366 | n.2709A>C | non_coding_transcript_exon_variant | 0.42 |
rrl | 1476368 | n.2711T>C | non_coding_transcript_exon_variant | 0.48 |
rrl | 1476369 | n.2712C>T | non_coding_transcript_exon_variant | 0.48 |
rrl | 1476372 | n.2715T>C | non_coding_transcript_exon_variant | 0.48 |
rrl | 1476374 | n.2717T>G | non_coding_transcript_exon_variant | 0.48 |
rrl | 1476381 | n.2724G>A | non_coding_transcript_exon_variant | 0.56 |
rrl | 1476428 | n.2771C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476429 | n.2772A>C | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476481 | n.2824T>A | non_coding_transcript_exon_variant | 0.41 |
rrl | 1476506 | n.2849T>C | non_coding_transcript_exon_variant | 0.25 |
rrl | 1476515 | n.2858C>T | non_coding_transcript_exon_variant | 0.26 |
rrl | 1476524 | n.2867C>A | non_coding_transcript_exon_variant | 0.25 |
rrl | 1476525 | n.2868A>G | non_coding_transcript_exon_variant | 0.25 |
rrl | 1476529 | n.2872A>T | non_coding_transcript_exon_variant | 0.25 |
rrl | 1476536 | n.2879G>A | non_coding_transcript_exon_variant | 0.24 |
rrl | 1476538 | n.2881A>G | non_coding_transcript_exon_variant | 0.23 |
rrl | 1476539 | n.2882A>G | non_coding_transcript_exon_variant | 0.23 |
rrl | 1476540 | n.2883C>G | non_coding_transcript_exon_variant | 0.24 |
rrl | 1476547 | n.2890C>T | non_coding_transcript_exon_variant | 0.25 |
rrl | 1476555 | n.2898A>C | non_coding_transcript_exon_variant | 0.24 |
rrl | 1476556 | n.2899G>A | non_coding_transcript_exon_variant | 0.24 |
rrl | 1476572 | n.2915G>C | non_coding_transcript_exon_variant | 0.23 |
rpsA | 1833886 | c.345C>G | synonymous_variant | 0.12 |
rpsA | 1833893 | p.Ala118Lys | missense_variant | 0.12 |
rpsA | 1833896 | p.Leu119Ile | missense_variant | 0.13 |
rpsA | 1833905 | p.Lys122Glu | missense_variant | 0.13 |
rpsA | 1833912 | p.Glu124Gly | missense_variant | 0.13 |
rpsA | 1833915 | p.Ala125Val | missense_variant | 0.13 |
rpsA | 1833921 | p.Lys127Thr | missense_variant | 0.13 |
rpsA | 1833928 | c.387G>C | synonymous_variant | 0.14 |
rpsA | 1833940 | c.399C>T | synonymous_variant | 0.15 |
rpsA | 1833949 | c.408T>C | synonymous_variant | 0.11 |
rpsA | 1833959 | p.Leu140Val | missense_variant | 0.11 |
rpsA | 1834451 | c.910T>C | synonymous_variant | 0.11 |
rpsA | 1834459 | c.918G>C | synonymous_variant | 0.11 |
rpsA | 1834465 | c.924T>C | synonymous_variant | 0.11 |
rpsA | 1834489 | c.948T>C | synonymous_variant | 0.11 |
rpsA | 1834508 | p.Ile323Val | missense_variant | 0.1 |
rpsA | 1834528 | c.987T>C | synonymous_variant | 0.12 |
rpsA | 1834534 | c.993C>G | synonymous_variant | 0.12 |
rpsA | 1834538 | p.Val333Ile | missense_variant | 0.12 |
rpsA | 1834546 | p.Asp335Glu | missense_variant | 0.12 |
rpsA | 1834552 | c.1011G>C | synonymous_variant | 0.11 |
rpsA | 1834555 | c.1014T>C | synonymous_variant | 0.11 |
rpsA | 1834556 | p.Ala339Ser | missense_variant | 0.11 |
rpsA | 1834836 | p.Met432Thr | missense_variant | 1.0 |
tlyA | 1917972 | c.33A>G | synonymous_variant | 1.0 |
Rv1979c | 2223293 | c.-129A>G | upstream_gene_variant | 1.0 |
kasA | 2518919 | p.Gly269Ser | missense_variant | 1.0 |
Rv2752c | 3067135 | c.-944C>T | upstream_gene_variant | 1.0 |
thyA | 3073868 | p.Thr202Ala | missense_variant | 1.0 |
ald | 3086788 | c.-32T>C | upstream_gene_variant | 1.0 |
fprA | 3473996 | c.-11_-10insA | upstream_gene_variant | 1.0 |
clpC1 | 4038287 | c.2418C>T | synonymous_variant | 1.0 |
embC | 4241111 | p.Val417Met | missense_variant | 1.0 |
embA | 4242643 | c.-590C>T | upstream_gene_variant | 1.0 |
embA | 4244857 | c.1629delG | frameshift_variant | 0.11 |
whiB6 | 4338595 | c.-75delG | upstream_gene_variant | 1.0 |
gid | 4407720 | c.483C>G | synonymous_variant | 1.0 |
gid | 4408156 | p.Leu16Arg | missense_variant | 1.0 |