Rv0668 - c.1191T>C


Drug resistance types
90 Sensitive 47 RR-TB 127 HR-TB 87 MDR-TB 19 Pre-XDR-TB 4 XDR-TB 280 Other
lineage Counts
lineage Count
lineage4.1.2 3
lineage2.2.1 39
lineage4.8 17
lineage4.9 164
lineage4.1.2.1.1 2
lineage1.2.1.1 1
lineage4.3.2.1 4
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage2.1;lineage4.9 20
lineage4 9
lineage4.1;lineage4.8 2
lineage4.1;lineage4.9 1
lineage4.4.1.1 5
lineage4.1.1.1 4
lineage1;lineage4.9 2
La1.2;La1.8.1 1
26
La3;M.canetti;lineage2.1;lineage4.9 12
lineage4.1.1.3 7
M.canetti;lineage2.1;lineage4.9 26
La3;lineage2.2.1 2
lineage4.1.2.1 29
lineage4.6.1.2 5
M.canetti;lineage4.3.1;lineage4.9 1
lineage3.1.1 2
La1.8.1 7
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage1.2.2.2 3
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.3.3 11
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
lineage4.2.2.2 3
La1.7;lineage4.9 3
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4.3.4.2.1 10
lineage4.2.1 4
lineage2.1;lineage4.9;lineage6.3 10
La1;lineage4.9 3
La1.3 2
lineage3 23
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
M.canetti;lineage2.1;lineage6.3 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage4.6.1.1 3
La3;lineage4.9 9
lineage5.2 2
lineage2.1 3
lineage1.1.3.1 2
lineage2.2.2 4
lineage4.3.4.1 4
lineage4.9;lineage7 3
lineage4.8.1 2
lineage1.1.1.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;lineage2.1;lineage4.9 3
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage2.2 5
lineage4.1.2.1;lineage4.9 1
La1.2.BCG 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage3;lineage4.9 1
lineage1.1 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1 1
M.canetti;lineage2.1;lineage3 1
lineage4.6.2.2 5
M.canetti;lineage2.2 3
La3;lineage2.2.2 1
M.canetti;lineage4.9 2
lineage2.2.1;lineage3 1
lineage4.4 1
lineage2.2.1;lineage6.3 1
lineage1.1.2 2
lineage1.1.2;lineage4 1
La2 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage2.2.2;lineage4 1
lineage1.1.3.2 1
lineage4.9;lineage6.3 10
lineage4.3.4.2 1
lineage4.3.2 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.1.3 2
lineage4.5 2
La3 2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage2.1;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage4.4.1.1.1 2
lineage3;lineage4 1
La3;lineage4.8 2
lineage3.1 1
lineage2.1;lineage2.2;lineage6.3 1
La1.7;lineage4.2 1
lineage5.1.4 1
lineage4.6.3;lineage4.9 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.2 1
La1.7;M.canetti;lineage4.9 1
lineage4.1.1.3;lineage4.9 2
lineage3.1.3 1
lineage4.7 3
lineage4.1 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage1.1.2;lineage2.2.1;lineage4.2.2.2 1
lineage1.1.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;M.canetti;lineage4.9 2
La3;lineage2.1;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La1.6 1
lineage6.3.1 1
La3;lineage2 1
M.canetti;lineage2.1;lineage4 1
La3;M.canetti;lineage2.2.1 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.1;lineage4.3.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;lineage1.1.2 1
La1.7.1 2
lineage4.6.5 2
lineage3.1.2 1
lineage1.1;lineage4 1
lineage2.2;lineage4 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage1.2.1.2 1
lineage4.1.2.1;lineage4.4.1.1 1
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.1.2.1;lineage4.4.1 1
lineage3.1.2.1;lineage4 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage6.1.3 2
La1.2.BCG;La1.8.1 1
La1.7;lineage4.9;lineage6 1
lineage4.2.1.1;lineage4.3.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.7.X-unk4;lineage4.9 1
lineage3.1.2.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.6.3;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 654
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR11342682 Other lineage4.1.2 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
ERR4799025 Other lineage4.8 None
SRR1169249 Other lineage4.9 None
SRR1184312 Other lineage2.2.1 None
ERR4972483 Pre-XDR-TB lineage4.1.2.1.1 None
ERR4814734 Other lineage1.2.1.1 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341345 Sensitive lineage4.9 None
SRR15368973 Other lineage4.9 None
ERR4818561 Sensitive lineage4.9 None
SRR6046066 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR13861381 HR-TB lineage4.9 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR3468544 Other lineage2.1;lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR7240033 Other La1.2;La1.8.1 None
ERR4817628 Sensitive lineage4.8 gb
ERR4816999 Other None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR26159043 Other lineage4.9 None
ERR11465665 Other lineage4.1.1.3 None
SRR6789626 Other None
ERR9786617 Other lineage4.1.1.1 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR1175508 Sensitive lineage4.9 None
ERR5917710 Other lineage4.1.2.1 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
SRR1196474 Other lineage3.1.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR6359074 HR-TB lineage4.9 None
SRR1196546 Other lineage4.9 None
ERR400326 Other lineage4.9 None
SRR6046245 Other lineage4.9 None
ERR4188213 Other La1.8.1 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR12708411 HR-TB lineage1.2.2.2 None
ERR553132 MDR-TB lineage4.1.2.1 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR4818583 Other lineage4.3.3 None
SRR12708392 Other lineage2.2.1 None
ERR4820854 Other lineage4.1.2.1 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675318 Other lineage4.9 None
SRR1049581 MDR-TB lineage4.6.1.2 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR29093909 Other lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
SRR5818586 RR-TB lineage4.2.2.2 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR11465015 Sensitive lineage4.3.4.2.1 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283044 Other lineage4 None
ERR3283032 Other lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
DRR184629 Other lineage2.2.1 None
SRR23961542 Other La1;lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR4769436 Other La1.3 None
SRR6046376 Other lineage3 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR990545 Other lineage3 None
SRR6046564 Sensitive lineage4.9 None
ERR11465025 Other lineage4.1.1.3 None
ERR4819877 HR-TB lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR4800341 Other lineage3 None
ERR4816478 HR-TB lineage4 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR926154 Sensitive lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR4813263 MDR-TB lineage4.8 None
SRR28119777 Other lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR7535047 RR-TB lineage4.6.1.1 None
ERR4812155 Other lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
ERR4872094 MDR-TB lineage5.2 None
SRR3675229 Sensitive lineage4.9 None
ERR702406 Other lineage2.1 None
ERR3797062 RR-TB lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4819546 HR-TB lineage3 None
ERR926164 Other lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
DRR185024 Other lineage2.2.2 None
ERR9117709 Other None
SRR5341437 Sensitive lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR7236330 Other La1.8.1 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR3675549 Other lineage4.9 None
ERR11466499 Other lineage4.3.4.1 None
SRR13861399 Other lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR3797086 Sensitive lineage4.9 None
SRR16156697 RR-TB lineage2.2.1 None
SRR3675456 RR-TB lineage4.9;lineage7 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR3675494 RR-TB lineage4.9 None
ERR752012 HR-TB lineage1.1.1.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR6044819 Sensitive lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR2229542 Other lineage4.8 None
SRR28119752 Other lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SAMN02414850 Other lineage4.1.2.1 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
SRR29050928 Other lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR4819383 RR-TB lineage4.9 None
ERR502470 RR-TB lineage4.9 None
ERR4819864 RR-TB lineage1.1.3.1 None
SRR1915485 Other La1.2.BCG None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR7496472 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR323048 Sensitive lineage4.9 None
SRR12708416 Sensitive None
SRR10315551 Sensitive lineage2.2.1 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
SRR5341396 Other lineage3;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR6359082 Other lineage4.9 None
ERR3283006 RR-TB lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
SRR9971168 Other lineage4.3.2.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR4820586 Other lineage3 gb
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR9786528 Sensitive lineage4.6.2.2 None
ERR2027233 Sensitive lineage4.1.2.1 None
SRR29097037 Other lineage4.9 None
ERR9119096 RR-TB lineage4.3.3 None
SRR12708419 Other lineage4.3.3 None
ERR6359070 Sensitive lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786843 Other None
SRR10869285 Pre-XDR-TB lineage2.2.2 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR11252664 Other lineage2.2.1 None
ERR11252612 Other La3;lineage4.9 None
ERR867567 RR-TB lineage3 None
SRR6045526 Other lineage4.9 None
ERR4815604 Other None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR7236233 Other La1.8.1 None
ERR926160 Sensitive lineage4.9 None
ERR4816551 HR-TB lineage4.1.1.3 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR9786444 Sensitive lineage4.8 None
SRR29093099 MDR-TB La3;lineage2.2.2 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR1035157 Other lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR14782054 Other lineage4.9 None
ERR2446566 Other lineage4.9 None
SRR16627752 RR-TB lineage4.4 None
ERR1063855 Other lineage4.9 None
ERR4769433 RR-TB lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4821655 HR-TB lineage4.9 None
SRR21733183 RR-TB lineage1.1.2 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR2513470 Other lineage4.2.2.2 None
SRR29051077 Other lineage4.9 None
ERR4817692 HR-TB lineage1.1.2;lineage4 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR29016901 Other La3;lineage4.9 None
ERR4816852 Other lineage4.9 None
ERR4820043 Sensitive lineage4.1.2.1 None
SRR13888750 Other La2 None
ERR926158 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
ERR4769495 Other La1.3 None
SRR10315567 HR-TB lineage2.2.1 None
ERR6359069 Sensitive lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR7496471 Sensitive lineage4 None
SRR28119753 Other lineage4.9 None
SRR3675248 Other lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR9786515 Other lineage4.1.2.1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
SRR1791696 Other La1.8.1 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR5341323 Sensitive lineage4.9 None
ERR11466174 Other lineage4.8 None
SRR29051093 Other lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR7821123 Other lineage1.1.3.2 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR2446382 Other lineage4 None
SRR29096900 Sensitive lineage4.3.4.2 None
SRR5709967 MDR-TB lineage2.2.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
SRR29017461 Other La3;lineage4.9 None
ERR926163 Other lineage4.9 None
ERR9117805 Other lineage4.3.2 None
ERR2229143 RR-TB lineage4.9 None
ERR4596902 MDR-TB lineage3 None
ERR926159 Sensitive lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR9786619 Sensitive lineage4.8 None
SRR1165699 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
SRR12708372 Sensitive lineage4.9 None
ERR11081258 Other lineage4.8 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR11049020 Other lineage4.8 None
SRR13423544 Other lineage4.5 None
ERR2446144 Other lineage3 nl
ERR13265748 Other lineage4.9;lineage6.3 None
SRR1172728 RR-TB La3 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4769493 Other lineage4.9 None
ERR13267017 Pre-XDR-TB lineage2.2.1 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR3675247 Other lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR14782405 HR-TB lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1172817 Other La3 None
SRR1173400 Other lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR11342634 MDR-TB lineage4.8 None
SRR21677886 Sensitive lineage4.9 None
SRR1172234 Other lineage4.9 None
SRR9971065 RR-TB lineage2.2.1 None
SRR1173740 Other lineage3;lineage4 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR7496509 Other None
ERR176751 Other lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR12015083 Other La3;lineage4.8 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR9971113 Other lineage2.2.1 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR1165423 RR-TB lineage4.1.2.1 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR1184346 HR-TB lineage3.1 None
ERR3797060 Other La1.8.1 None
SRR29016780 Other lineage4.9 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
SRR23961559 Other La1.7;lineage4.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675311 Other lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR6045892 Sensitive lineage4.9 None
ERR5908228 RR-TB lineage4.3.3 None
ERR7821163 Other lineage2.2.1 None
SRR9971112 Other lineage2.2.1 None
ERR11068570 Other lineage4 None
SRR5709926 MDR-TB lineage2.2.1 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
SRR1062918 Other lineage3 None
ERR3804155 Other lineage4.1.2.1 None
ERR2513283 Sensitive lineage5.1.4 None
SRR7131023 Other lineage4.1.2.1 None
SRR11662690 HR-TB lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR1165584 Other lineage4.1.2.1 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR3675221 Other lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR2514692 Other None
SRR25827682 Other None
ERR212001 HR-TB None
SRR1172857 Other None
ERR212033 Other lineage4.9 None
ERR9787197 Other None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6789621 Other lineage4.9 None
ERR4817060 Other None
ERR234659 Other None
ERR2517528 RR-TB lineage3 nl
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR11465024 Other lineage4.1.1.3 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2517475 Other lineage4 None
ERR4769418 Other La1.2 None
ERR4769497 Other La1;lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
ERR5979407 Other lineage3 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR1173281 Other lineage3 None
SRR12142341 HR-TB lineage2.1 None
SRR13861396 HR-TB lineage4.9 None
SRR18572454 RR-TB lineage4.9 None
SRR3675547 Sensitive lineage4.9 None
SRR5341365 Pre-XDR-TB lineage3 None
SRR6044815 Other lineage4.9 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR3675487 Other M.canetti;lineage4.9 None
SRR6046305 Sensitive lineage4.9 None
ERR4769550 Sensitive La1;lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR18913742 Sensitive lineage3.1.3 None
SRR7496523 Other lineage4.7 None
SRR1173633 Other lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR9786440 Other lineage4.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR1173310 Other lineage3.1.1 None
SRR1173363 Other None
SRR3675572 Other None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675477 Sensitive lineage4.9 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR6046385 Sensitive lineage4.9 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045217 Sensitive lineage4.9 None
ERR3275196 Other lineage2.2.1 nl
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR25827452 MDR-TB lineage1.1.2;lineage2.2.1;lineage4.2.2.2 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR6785413 Other lineage2.2.1 None
ERR2512770 Sensitive lineage4.2.1 None
ERR926155 Sensitive lineage4.9 None
ERR4407463 HR-TB None
ERR4798823 HR-TB lineage4 None
ERR4819314 Other lineage1.1.1 None
ERR4819241 Other lineage4.9 None
SRR1140716 Other lineage3 None
SRR1172951 Other lineage4.9 None
SRR14782539 MDR-TB lineage4.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR7645928 Other lineage4.7 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR9786569 Other lineage4.8 None
ERR12015084 Other lineage4.8 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR2101471 Sensitive lineage4.4.1.1 None
ERR1199132 Sensitive lineage4.6.1.1 None
SRR7645906 Other lineage2.2.1 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1196583 Other lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4808964 RR-TB lineage2.2.1 None
SRR1165506 Other lineage4.1.2.1 None
SRR3675507 Other lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR11252736 Other lineage4.9 None
SRR10993951 RR-TB La1.6 None
SRR1181403 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
SRR1049673 Pre-XDR-TB lineage3 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR4797285 MDR-TB lineage1.2.2.2 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR387051 Other lineage4.9 None
ERR3275220 Other lineage3 nl
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1175496 Sensitive lineage4.9 None
SRR29772570 Other lineage4.9 None
ERR9787139 Other lineage6.3.1 None
SRR20969677 HR-TB La3;lineage2 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR1180440 Other lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4815121 HR-TB lineage4.6.2.2 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR4821143 Other lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3275450 Other lineage4 None
SRR1238559 Other lineage4.9 None
ERR4797141 Sensitive lineage3 None
ERR3797067 Other La1.8.1 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR473323 HR-TB lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR18003019 Other lineage2.2.1 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR12708384 Sensitive lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR9786682 Other lineage4.1.2.1 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR9786627 Other lineage4.1.2.1 None
ERR5162090 RR-TB lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR6045191 Sensitive lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR5341296 Sensitive lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
ERR4821053 RR-TB lineage3 None
SRR1169194 Other lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR12015086 RR-TB lineage4.8 None
ERR7801175 HR-TB lineage4.6.5 None
ERR4820773 HR-TB lineage4.9 None
SRR7645899 Other lineage2.2.1 None
ERR4821172 RR-TB lineage4.9 None
ERR7801176 RR-TB lineage4.6.5 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR11049143 Sensitive lineage4.1.2.1 None
SRR7645973 Other lineage4.3.4.1 None
ERR4797037 Pre-XDR-TB lineage3.1.2 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR6045548 Sensitive lineage4.9 None
SRR1167055 Other lineage4.1.2.1 None
ERR4819322 Other lineage1.1;lineage4 None
ERR926162 Sensitive lineage4.9 None
ERR3275709 HR-TB lineage3 nl
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1165628 Other La3;lineage4.9 None
ERR9029360 MDR-TB lineage2.2.1 None
ERR736848 Other lineage4.9 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR12708371 HR-TB lineage4.1.1.3 None
SRR12708418 HR-TB lineage2.2.1 None
ERR4816585 Other lineage2.2 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR28119805 Other lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR9971046 MDR-TB lineage4.8 None
ERR4769442 Sensitive lineage4.9 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1173770 Other lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR176549 Other lineage4.3.4.2.1 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR926156 Sensitive lineage4.9 None
ERR9786076 Sensitive lineage3 None
ERR9786421 Other lineage4.1.2.1 None
SRR1181256 Other lineage4.9 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4816729 Sensitive lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR1184372 MDR-TB None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR7240492 HR-TB La1.7.1 None
SRR1173453 Other lineage4.4.1.1 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR926165 Sensitive lineage4.9 None
ERR9786604 Other None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
SRR3675243 Other lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR1167384 Other La3;lineage4.9 None
SRR6045002 RR-TB lineage4.9 None
SRR6046382 Sensitive lineage2.2.1 None
SRR1640750 Other None
ERR4815752 Other lineage4.9 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675457 Other lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR3675510 Sensitive La3;lineage4.9 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
SRR1140736 Other lineage4.1.2.1 None
ERR4815471 Sensitive lineage4.9 None
ERR4818347 Other lineage4.1.2 None
ERR4820503 Sensitive lineage2.2.1 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6326069 Pre-XDR-TB lineage4.3.4.1 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1196566 Other lineage4.9 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR21732980 Other lineage4.3.3 None
SRR3675232 Other lineage4.1.2.1 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR28351455 Other lineage3.1.2.1;lineage4 None
SRR29096541 Other lineage4.9 None
SRR29051043 Other lineage4.3.3 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786694 Other lineage4.1.2.1 None
ERR4796577 HR-TB None
ERR9787165 Other lineage6.1.3 None
ERR4816322 Other lineage4.9 None
ERR926157 Sensitive lineage4.9 None
SRR1173170 Other lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1180137 Other lineage2.2.1 None
SRR1173778 Other lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR1196768 MDR-TB None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR22249687 Sensitive lineage4.8 None
ERR3468607 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675275 Other lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR4769439 HR-TB lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
SRR12708414 HR-TB lineage2.2.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR18213713 HR-TB None
ERR4817893 Other La3;lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR4815079 RR-TB lineage3 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR9787336 RR-TB lineage6.1.3 None
SRR12708409 HR-TB lineage4.3.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR3675214 Other lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR1183049 RR-TB lineage2.2 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR6046839 Other lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786384 Sensitive lineage4.1.2.1 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR7755655 Other lineage4.1.2.1 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR5153091 HR-TB lineage4.3.3 None
SRR9970980 HR-TB lineage4.1.2 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675210 Sensitive lineage4.9 None
SRR1196677 Other lineage2.2 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR2693228 RR-TB lineage4.9 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR12708415 HR-TB lineage2.2.1 None
SRR3675455 Sensitive lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1049672 Other lineage3 None
SRR14801759 HR-TB La1.7;lineage4.9 None
SRR3675279 Sensitive lineage4.9 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR067712 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None