Rv0668 - c.1191T>C


Drug resistance types
70 Sensitive 63 RR-TB 85 HR-TB 139 MDR-TB 18 Pre-XDR-TB 4 XDR-TB 247 Other
lineage Counts
lineage Count
La3 2
lineage4.9 152
lineage4.1.2.1;lineage4.4.1.1 1
lineage4.8 16
lineage3 22
lineage2.2.1 36
lineage4.6.1.1 3
lineage4.1.2.1 29
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage2.1;lineage4.9 20
lineage4.9;lineage7 3
lineage4.8.1 2
lineage1.1.1.1 1
lineage2.1 3
M.canetti;lineage2.1 1
M.canetti;lineage2.1;lineage6.3 2
lineage4.6.1.2 4
La1.2.BCG 2
La3;lineage2.1;lineage4.9;lineage6.3 4
La1.7;lineage4.2 1
lineage4 8
lineage2.1;lineage4.9;lineage6.3 10
lineage4.3.3 10
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.3.4.2.1 10
M.canetti;lineage2.1;lineage4.9 26
lineage4.1.1.3 7
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.2 3
lineage4.6.2.2 5
lineage4.9;lineage6.3 8
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage5.1.4 1
lineage4.1.1.1 4
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
La1.7;lineage4.9 3
26
lineage3.1.2.1;lineage4 1
lineage1.1.2 2
La3;M.canetti;lineage4.9 2
lineage4.1.1.3;lineage4.9 2
La3;lineage4.9 7
La1;lineage4.9 3
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage2.2.2 5
lineage2.2 4
lineage4.2.1.1;lineage4.3.3 1
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.4.1.1 5
La3;lineage2.1;lineage4.9 3
M.canetti;lineage2.1;lineage4 1
La3;M.canetti;lineage2.2.1 1
lineage4.1.2.1.1 2
lineage4.4.1.1.1 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage6.3 2
lineage4.1.2 3
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage4.6.5 2
M.canetti;lineage4.9 2
La3;M.canetti;lineage2.1;lineage4.9 12
La1.8.1 7
lineage4.3.4.1 4
lineage4.1.3 2
lineage5.2 2
lineage1.2.2.2 3
M.canetti;lineage2.2.2;lineage6.2 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage3.1.1 2
La3;lineage2.2.1 1
lineage6.1.3 2
lineage4.1;lineage4.9 1
lineage3;lineage4.9 1
M.canetti;lineage2.1;lineage3 1
lineage4.7 3
lineage1.1.3.1 2
lineage4.1.2.1;lineage4.4.1 1
La1.7;lineage4.9;lineage6 1
La1.6 1
lineage2.1;lineage2.2;lineage6.3 1
lineage6.3.1 1
La1.7.X-unk4;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;lineage1.1.2 1
La1.7.1 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage3.1.2 1
lineage1.2.1.1 1
lineage1.1.1 1
lineage3.1.3 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.2;lineage4 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.2.1 4
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.3.2.1 4
La1.2.BCG;La1.8.1 1
La2 1
lineage1;lineage4.9 2
M.canetti;lineage4.3.1;lineage4.9 1
lineage4.5 2
lineage2.1;lineage4.3.2;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage1.1.3.2 1
lineage3;lineage4 1
lineage1.2.1.2 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.2 1
lineage1.1.2;lineage2.2.1;lineage4.2.2.2 1
lineage4.1 1
La3;lineage4.8 2
lineage2.1;lineage4.3.2 1
La3;lineage2 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.6.3;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage1.1.2;lineage4 1
La1.7;M.canetti;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
La3;M.canetti;lineage2.1;lineage3.1 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage3.1.2.1 1
lineage4.2.2.2 3
lineage1.1;lineage4 1
lineage2.2.1;lineage3 1
lineage4.1;lineage4.8 2
lineage4.4 1
lineage2.2.1;lineage6.3 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage4.1.2.1;lineage4.9 1
La1.3 2
La1.2;La1.8.1 1
lineage3.1 1
lineage4.3.2 1
M.canetti;lineage2.1;lineage4.1.2.1 1
spoligotype Counts
spoligotype Count
None 626
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1172728 RR-TB La3 None
ERR6358951 Sensitive lineage4.9 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
SRR5341296 Sensitive lineage4.9 None
ERR4813263 MDR-TB lineage4.8 None
ERR4797141 Sensitive lineage3 None
SRR18572454 RR-TB lineage4.9 None
ERR867567 RR-TB lineage3 None
ERR4814352 Other lineage2.2.1 None
ERR6359069 HR-TB lineage4.9 None
SRR1173170 Other lineage4.9 None
SRR7535047 RR-TB lineage4.6.1.1 None
ERR3804155 Other lineage4.1.2.1 None
SRR3675229 Sensitive lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR4797313 Sensitive lineage2.2.1 None
SRR14782405 HR-TB lineage4.9 None
SRR3675457 Other lineage4.9 None
SRR9971065 RR-TB lineage2.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR3797086 Sensitive lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR11081258 Other lineage4.8 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR3675494 RR-TB lineage4.9 None
ERR752012 HR-TB lineage1.1.1.1 None
SRR6044819 Sensitive lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR3675247 Other lineage4.9 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
SRR1196546 Other lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR502470 RR-TB lineage4.9 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1915485 Other La1.2.BCG None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786601 Other lineage4.1.2.1 None
SRR23961559 Other La1.7;lineage4.2 None
ERR2517475 Other lineage4 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675311 Other lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
ERR5908228 RR-TB lineage4.3.3 None
ERR473323 HR-TB lineage4.9 None
ERR7821163 Other lineage2.2.1 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1180446 Other lineage4.9 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
SRR12708419 Other lineage4.3.3 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR3275196 RR-TB lineage2.2.1 nl
ERR4819241 Other lineage4.9 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR926155 Other lineage4.9 None
ERR3283006 RR-TB lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
SRR1915487 Other La1.2.BCG None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR9786645 Other lineage4.6.2.2 None
ERR4815815 Sensitive lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR1062918 Other lineage3 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR2513283 Sensitive lineage5.1.4 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR9786682 Other lineage4.1.2.1 None
SRR1165584 Other lineage4.1.2.1 None
ERR926161 Sensitive lineage4.9 None
ERR9119096 RR-TB lineage4.3.3 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4769442 Sensitive lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
SRR3675572 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
ERR9786671 Other None
ERR11252664 Other lineage2.2.1 None
ERR9786843 Other None
SRR1640750 RR-TB None
SRR6789626 Other None
ERR234659 HR-TB None
SRR28351455 Other lineage3.1.2.1;lineage4 None
ERR2514692 Other None
SRR18213713 HR-TB None
SRR25827682 Other None
ERR212001 HR-TB None
SRR1172857 Other None
ERR9787197 Other None
SRR3675236 Other None
SRR28119805 Other lineage4.9 None
ERR4816999 Other None
SRR28119777 Other lineage4.9 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
ERR9786444 Sensitive lineage4.8 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1199132 Sensitive lineage4.6.1.1 None
SRR21733183 RR-TB lineage1.1.2 None
ERR3797029 Other lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR10869285 Pre-XDR-TB lineage2.2.2 None
ERR4808964 RR-TB lineage2.2.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4800341 HR-TB lineage3 None
ERR4810624 MDR-TB lineage2.2 None
ERR4821172 RR-TB lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR1165506 Other lineage4.1.2.1 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR4769493 Other lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4815121 HR-TB lineage4.6.2.2 None
SRR6785413 Other lineage2.2.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR4821143 Other lineage4.9 None
ERR4972483 Pre-XDR-TB lineage4.1.2.1.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR6359070 Sensitive lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173453 Other lineage4.4.1.1 None
ERR11465665 Other lineage4.1.1.3 None
SRR1049582 MDR-TB lineage4.6.1.2 None
ERR212033 Other lineage4.9 None
ERR9786528 Sensitive lineage4.6.2.2 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR22249687 Sensitive lineage4.8 None
SRR16156697 RR-TB lineage2.2.1 None
ERR9786076 Other lineage3 None
SRR6046839 Other lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045217 Other lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
SRR2101471 Sensitive lineage4.4.1.1 None
ERR11465025 Other lineage4.1.1.3 None
ERR9786619 Sensitive lineage4.8 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR9970980 HR-TB lineage4.1.2 None
ERR4821053 RR-TB lineage3 None
SRR1169194 Other lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR12015086 RR-TB lineage4.8 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR7801175 HR-TB lineage4.6.5 None
ERR4820773 HR-TB lineage4.9 None
DRR184629 Other lineage2.2.1 None
ERR4817667 HR-TB lineage4.8 None
ERR176549 Other lineage4.3.4.2.1 None
SRR1196677 Other lineage2.2 None
ERR9786569 Other lineage4.8 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR702406 Other lineage2.1 None
ERR926156 Other lineage4.9 None
SRR1173633 Other lineage4.9 None
ERR3275220 Other lineage3 nl
ERR926162 Sensitive lineage4.9 None
ERR926154 Sensitive lineage4.9 None
SRR3675487 MDR-TB M.canetti;lineage4.9 None
SRR3675214 Other lineage4.9 None
ERR990545 RR-TB lineage3 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR4816729 Sensitive lineage4.9 None
SRR13861381 HR-TB lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786627 Other lineage4.1.2.1 None
SRR15368973 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR3275709 HR-TB lineage3 nl
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797023 MDR-TB La1.8.1 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR4821655 HR-TB lineage4.9 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6789621 Other lineage4.9 None
SRR1173281 Other lineage3 None
SRR8217918 HR-TB lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4812155 Other lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR11049020 Other lineage4.8 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR926164 Other lineage4.9 None
SRR6044815 RR-TB lineage4.9 None
DRR185024 Other lineage2.2.2 None
ERR4816656 Other lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786694 Other lineage4.1.2.1 None
SRR3675514 Sensitive lineage4.9 None
ERR11466499 Other lineage4.3.4.1 None
SRR21677886 Sensitive lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SRR1172234 Other lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR9971046 MDR-TB lineage4.8 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR4818347 Other lineage4.1.2 None
SRR12708392 Other lineage2.2.1 None
ERR4797201 Other lineage1.2.2.2 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR4819383 RR-TB lineage4.9 None
ERR3468607 RR-TB lineage4.9 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1173310 Other lineage3.1.1 None
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR11465024 Other lineage4.1.1.3 None
ERR9787165 Other lineage6.1.3 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675243 MDR-TB lineage4.9 None
ERR323048 Sensitive lineage4.9 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR5341396 Other lineage3;lineage4.9 None
SRR5709926 MDR-TB lineage2.2.1 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
ERR4820586 Other lineage3 gb
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR11662690 HR-TB lineage4.9 None
SRR7496523 Other lineage4.7 None
ERR9786617 Other lineage4.1.1.1 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR9786642 Other lineage4.1.2.1 None
SRR7496509 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR9786604 Other None
ERR4815604 Other None
ERR9117709 Other None
ERR4407463 HR-TB None
SRR1196768 MDR-TB None
ERR4817060 Other None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
SRR10993951 RR-TB La1.6 None
SRR1181403 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR6046385 Sensitive lineage4.9 None
SRR3675507 RR-TB lineage4.9 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR3675549 Other lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR1175496 Sensitive lineage4.9 None
ERR9787139 Other lineage6.3.1 None
SRR1180440 Other lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR3275450 Other lineage4 None
ERR9787336 RR-TB lineage6.1.3 None
SRR1167055 Other lineage4.1.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797067 Other La1.8.1 None
SRR1183049 RR-TB lineage2.2 None
ERR9786384 Sensitive lineage4.1.2.1 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR18003019 Other lineage2.2.1 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR7755655 Other lineage4.1.2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4817896 HR-TB lineage2.2.1 None
SRR1792478 HR-TB La1.7.1 None
ERR926165 Other lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR7801176 RR-TB lineage4.6.5 None
ERR4596902 MDR-TB lineage3 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4820503 Sensitive lineage2.2.1 None
ERR4797037 Pre-XDR-TB lineage3.1.2 None
SRR1167384 Other La3;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR3797060 Other La1.8.1 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR2693228 RR-TB lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
SRR3675455 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
ERR4819314 HR-TB lineage1.1.1 None
ERR387051 RR-TB lineage4.9 None
SRR6046305 Sensitive lineage4.9 None
SRR18913742 Sensitive lineage3.1.3 None
ERR736848 Other lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
ERR926157 Other lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR3283044 Other lineage4 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR1791696 RR-TB La1.8.1 None
SRR3675210 Sensitive lineage4.9 None
SRR6045548 Other lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR5341365 Pre-XDR-TB lineage3 None
SRR7645973 Other lineage4.3.4.1 None
ERR067712 Sensitive lineage4.9 None
SRR14782539 MDR-TB lineage4.2.1 None
ERR4799025 Other lineage4.8 None
SRR3675545 RR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR11342682 Other lineage4.1.2 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR1184312 Other lineage2.2.1 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR5341345 Sensitive lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR7236233 Other La1.8.1 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4818561 Sensitive lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR6046066 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR13888750 Other La2 None
ERR926158 Sensitive lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR22424787 Sensitive lineage4.9 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR4811031 Other lineage4.5 None
SRR10315567 HR-TB lineage2.2.1 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR3283032 Other lineage4.9 None
SRR7496471 Sensitive lineage4 None
ERR4811030 Other lineage4.9 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675248 Other lineage4.9 None
ERR4188213 Other La1.8.1 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR12708411 HR-TB lineage1.2.2.2 None
ERR553132 MDR-TB lineage4.1.2.1 None
SRR6046382 RR-TB lineage2.2.1 None
ERR4816551 MDR-TB lineage4.1.1.3 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR7821123 Other lineage1.1.3.2 None
ERR2446566 Other lineage4.9 None
SRR1173740 Other lineage3;lineage4 None
ERR4797285 MDR-TB lineage1.2.2.2 None
SRR3675221 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR867541 MDR-TB lineage4.2.1 None
ERR926159 Sensitive lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR12006550 Other lineage1.2.1.2 None
ERR12015084 Other lineage4.8 None
SRR12708384 Sensitive lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4819546 HR-TB lineage3 None
ERR3797062 RR-TB lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR4769418 Other La1.2 None
SRR7236330 Other La1.8.1 None
SRR25827452 MDR-TB lineage1.1.2;lineage2.2.1;lineage4.2.2.2 None
ERR9786440 Other lineage4.1 None
SRR13861399 Other lineage4.9 None
ERR12015083 Other La3;lineage4.8 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675547 Sensitive lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR20969677 HR-TB La3;lineage2 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR13861396 HR-TB lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR2229542 Other lineage4.8 None
SRR1180137 RR-TB lineage2.2.1 None
SRR1165423 RR-TB lineage4.1.2.1 None
SAMN02414850 Other lineage4.1.2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4815752 Other lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR1172817 Other La3 None
SRR6045191 Sensitive lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1173770 Other lineage4.9 None
ERR2446382 Other lineage4 None
SRR7240492 MDR-TB La1.7.1 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR9971168 Other lineage4.3.2.1 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
ERR2027233 Sensitive lineage4.1.2.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR971389 Other lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR1173363 Other None
ERR11252612 Other La3;lineage4.9 None
SRR1184372 MDR-TB None
ERR4796577 HR-TB None
ERR11252736 Other lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR12708416 Sensitive None
SRR1196583 Other lineage4.9 None
ERR1035157 Other lineage4.9 None
ERR4816852 Other lineage4.9 None
ERR4817692 MDR-TB lineage1.1.2;lineage4 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR3675275 Other lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR11342662 MDR-TB lineage4.8.1 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR4817893 Other La3;lineage4.8 None
SRR1049673 Pre-XDR-TB lineage3 None
ERR9786515 Other lineage4.1.2.1 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
SRR1181256 Other lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR26399973 Other La3;lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR5162090 RR-TB lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR4769433 RR-TB lineage4.9 None
ERR4816322 Other lineage4.9 None
ERR4819322 Other lineage1.1;lineage4 None
SRR1238559 Other lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR2512770 Sensitive lineage4.2.1 None
SRR23961542 Other La1;lineage4.9 None
ERR5311089 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR14782054 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR2027263 Other lineage4 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR16627752 RR-TB lineage4.4 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR6045002 RR-TB lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR1140736 Other lineage4.1.2.1 None
SRR12708414 HR-TB lineage2.2.1 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR2517528 RR-TB lineage3 nl
ERR323043 Other lineage2.1;lineage4.9 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR4820043 Sensitive lineage4.1.2.1 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR1175508 Sensitive lineage4.9 None
ERR926160 Other lineage4.9 None
SRR7645928 Other lineage4.7 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR400326 Other lineage4.9 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
SRR7645906 Other lineage2.2.1 None
ERR5917710 RR-TB lineage4.1.2.1 None
SRR3675318 Other lineage4.9 None
SRR7645899 Other lineage2.2.1 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR176793 Other lineage4.1.1.1 None
ERR926163 Other lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR4769495 Other La1.3 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
SRR1172951 Other lineage4.9 None
ERR4815471 HR-TB lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
ERR4769436 Other La1.3 None
SRR1140716 Other lineage3 None
SRR6046376 Other lineage3 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR11049143 Sensitive lineage4.1.2.1 None
SRR1184294 Other lineage4.9 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR9786421 Other lineage4.1.2.1 None
ERR4816478 HR-TB lineage4 None
SRR13423544 Other lineage4.5 None
ERR176751 HR-TB lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2446144 Other lineage3 nl
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR12708409 HR-TB lineage4.3.3 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR4817628 Sensitive lineage4.8 gb
ERR6326069 Pre-XDR-TB lineage4.3.4.1 None
SRR26159043 Other lineage4.9 None
ERR2513470 Other lineage4.2.2.2 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9029360 MDR-TB lineage2.2.1 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1184346 HR-TB lineage3.1 None
SRR1173400 Other lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
SRR3675477 Sensitive lineage4.9 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR7496472 Other lineage4.9 None
ERR4818583 Other lineage4.3.3 None
ERR4769550 Sensitive La1;lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR4820854 Other lineage4.1.2.1 None
ERR4815441 HR-TB lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR4814639 HR-TB lineage4.9 None
SRR1196474 Other lineage3.1.1 None
SRR5341323 Sensitive lineage4.9 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR5709967 MDR-TB lineage2.2.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR3675522 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR9117805 Other lineage4.3.2 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR2229143 RR-TB lineage4.9 None
ERR3797070 Other lineage4.9 None
ERR11465015 Sensitive lineage4.3.4.2.1 None
ERR4815079 RR-TB lineage3 None
ERR5979407 Other lineage3 None
SRR1165699 Other lineage4.9 None
SRR1196566 Other lineage4.9 None
SRR21732980 Other lineage4.3.3 None
ERR4819877 HR-TB lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR3468544 RR-TB lineage2.1;lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR11466174 Other lineage4.8 None
SRR9971112 HR-TB lineage2.2.1 None