TB-Profiler

TB-Profiler result

Run: SRR11342662

Summary

Run ID: SRR11342662

Sample name:

Date: 2024-10-03T16:05:17.951692

Number of reads: 7994442

Percentage reads mapped: 69.69

Median coverage: 185.0

Strain: lineage4.8.1

Spoligotype:

Drug-resistance: MDR-TB

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Lineage Table: The lineage is inferred by analysing lineage specific SNPs

Lineage	Family	RDs	Frequency
lineage4	Euro-American	None	1.0
lineage4.8	Euro-American (mainly T)	RD219	1.0
lineage4.8.1	Euro-American (mainly T)	RD219	1.0

Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes

Drug	Resistance	Supporting mutations	WHO confidence	Comment
rifampicin	rpoB	p.Ser441Val	Assoc w R - Interim	Expert rule: Non-silent variants in RRDR of rpoB
rifampicin	rpoB	p.Ser450Asn	Assoc w R - Interim	Expert rule: Non-silent variants in RRDR of rpoB
p.Leu464Met		Mutation from literature
isoniazid	katG	p.Ser315Thr	Assoc w R	High-level resistance
ethambutol	embB	p.Met306Leu	Assoc w R
pyrazinamide	pncA	p.Leu151Ser	Assoc w R
streptomycin	rpsL	p.Lys43Arg	Assoc w R
streptomycin	rrs	n.799C>T	Uncertain significance	Mutation from literature
n.888G>A	rrs	Uncertain significance	Mutation from literature
fluoroquinolones
moxifloxacin
ofloxacin
levofloxacin
ciprofloxacin
aminoglycosides
amikacin	rrs	n.1402C>A	Uncertain significance	Mutation from literature
amikacin	rrs	n.1484G>T	Assoc w R
capreomycin	rrs	n.1402C>A	Uncertain significance	Mutation from literature
capreomycin	rrs	n.1484G>T	Assoc w R
kanamycin	rrs	n.1402C>A	Uncertain significance	Mutation from literature
kanamycin	rrs	n.1484G>T	Assoc w R
cycloserine
ethionamide
clofazimine
para-aminosalicylic_acid
delamanid
bedaquiline
linezolid

Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance

Gene	Chromosome position	Mutation	Type	Estimated fraction	Drugs	Confidence	Comment
rpoB	761127	p.Ser441Val	missense_variant	0.91	rifampicin	Assoc w R - Interim	Expert rule: Non-silent variants in RRDR of rpoB
rpoB	761154	p.Ser450Asn	missense_variant	0.53	rifampicin	Assoc w R - Interim	Expert rule: Non-silent variants in RRDR of rpoB
rpoB	761196	p.Leu464Met	missense_variant	0.64	rifampicin		Mutation from literature
rpsL	781687	p.Lys43Arg	missense_variant	0.98	streptomycin	Assoc w R
rrs	1472644	n.799C>T	non_coding_transcript_exon_variant	0.18	streptomycin	Uncertain significance	Mutation from literature
rrs	1472733	n.888G>A	non_coding_transcript_exon_variant	0.57	streptomycin	Uncertain significance	Mutation from literature
rrs	1473247	n.1402C>A	non_coding_transcript_exon_variant	0.26	amikacin	Uncertain significance	Mutation from literature
					capreomycin	Uncertain significance	Mutation from literature
					kanamycin	Uncertain significance	Mutation from literature
rrs	1473329	n.1484G>T	non_coding_transcript_exon_variant	0.23	amikacin	Assoc w R
					capreomycin	Assoc w R
					kanamycin	Assoc w R
katG	2155168	p.Ser315Thr	missense_variant	1.0	isoniazid	Assoc w R	High-level resistance
pncA	2288790	p.Leu151Ser	missense_variant	1.0	pyrazinamide	Assoc w R
embB	4247429	p.Met306Leu	missense_variant	1.0	ethambutol	Assoc w R

Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance

Gene	Chromosome position	Mutation	Type	Estimated fraction	Drugs	Confidence
gyrA	7362	p.Glu21Gln	missense_variant	1.0	levofloxacin	Not assoc w R
gyrA	7362	p.Glu21Gln	missense_variant	1.0	moxifloxacin	Not assoc w R
rpoB	760997	c.1191G>C	synonymous_variant	0.13	rifampicin	Not assoc w R - Interim
rpoB	761015	c.1209G>C	synonymous_variant	0.3	rifampicin	Not assoc w R - Interim
rpoB	761021	c.1215G>C	synonymous_variant	0.31	rifampicin
rpoB	761027	c.1221A>G	synonymous_variant	0.42	rifampicin	Not assoc w R - Interim
rpoB	761031	p.Gln409Asn	missense_variant	0.31	rifampicin
rpoB	761037	c.1231_1233delTTGinsCTC	synonymous_variant	0.52	rifampicin
rpoB	761051	c.1245G>C	synonymous_variant	0.25	rifampicin	Not assoc w R - Interim
rpoB	761054	c.1248G>C	synonymous_variant	0.74	rifampicin	Not assoc w R - Interim
rpoB	761057	c.1251G>C	synonymous_variant	0.26	rifampicin	Not assoc w R - Interim
rpoB	761058	p.Val418Thr	missense_variant	0.48	rifampicin
rpoB	761084	c.1278C>A	synonymous_variant	0.24	rifampicin	Not assoc w R - Interim
rpoB	761088	c.1282_1283delAGinsTC	synonymous_variant	0.87	rifampicin
rpoB	761096	c.1290G>C	synonymous_variant	0.33	rifampicin
rpoB	761096	c.1290G>T	synonymous_variant	0.56	rifampicin
rpoB	761097	c.1291_1293delAGCinsTCG	synonymous_variant	0.21	rifampicin
rpoB	761102	c.1296A>G	synonymous_variant	0.9	rifampicin
rpoB	761132	c.1326G>C	synonymous_variant	0.9	rifampicin	Not assoc w R - Interim
rpoB	761133	c.1327T>C	synonymous_variant	0.91	rifampicin	Not assoc w R - Interim
rpoB	761150	c.1344A>C	synonymous_variant	0.54	rifampicin	Not assoc w R - Interim
rpoB	761150	c.1344A>T	synonymous_variant	0.34	rifampicin	Not assoc w R - Interim
rpoB	761159	c.1353G>C	synonymous_variant	0.84	rifampicin	Not assoc w R - Interim
rpoB	761165	c.1359G>C	synonymous_variant	0.84	rifampicin	Not assoc w R - Interim
rpoB	761180	c.1374A>C	synonymous_variant	0.78	rifampicin	Not assoc w R - Interim
rpoB	761186	p.Glu460Asp	missense_variant	0.19	rifampicin	Uncertain significance
rpoB	761189	c.1383T>C	synonymous_variant	0.68	rifampicin	Not assoc w R - Interim
rpoB	761192	c.1386C>G	synonymous_variant	0.17	rifampicin
rpoB	761193	p.Gly463Ser	missense_variant	0.47	rifampicin
rpoB	761201	c.1395G>A	synonymous_variant	0.17	rifampicin
rpoB	761204	c.1398C>T	synonymous_variant	0.17	rifampicin
rpoB	761207	c.1401C>A	synonymous_variant	0.17	rifampicin
rpoB	761213	c.1407G>C	synonymous_variant	0.58	rifampicin
rpoB	761217	p.Pro471Thr	missense_variant	0.39	rifampicin
rpoB	761231	c.1425C>G	synonymous_variant	0.3	rifampicin
rpoB	761234	c.1428G>C	synonymous_variant	0.43	rifampicin	Not assoc w R - Interim
rpoB	761243	c.1437G>C	synonymous_variant	0.2	rifampicin
rpoB	761249	c.1443A>G	synonymous_variant	0.13	rifampicin	Not assoc w R - Interim
rpoB	761520	p.Tyr572Leu	missense_variant	0.16	rifampicin
rpoB	761534	c.1728G>C	synonymous_variant	0.28	rifampicin
rpoB	761537	c.1731C>G	synonymous_variant	0.28	rifampicin	Not assoc w R - Interim
rpoB	761557	p.Ala584Gly	missense_variant	0.32	rifampicin	Uncertain significance
rpoB	761562	p.Ala586Ser	missense_variant	0.32	rifampicin
rpoB	761565	p.Met587Leu	missense_variant	0.33	rifampicin
rpoB	761570	c.1764T>C	synonymous_variant	0.33	rifampicin	Not assoc w R - Interim
rpoB	761579	c.1773G>C	synonymous_variant	0.4	rifampicin	Not assoc w R - Interim
rpoB	761600	c.1794T>C	synonymous_variant	0.46	rifampicin
rpoB	761612	c.1806G>C	synonymous_variant	0.45	rifampicin	Not assoc w R - Interim
rpoB	761615	c.1809A>C	synonymous_variant	0.46	rifampicin	Not assoc w R - Interim
rpoB	761633	c.1827G>C	synonymous_variant	0.46	rifampicin
rpoB	761642	c.1836G>C	synonymous_variant	0.36	rifampicin
rpoB	761643	p.Val613Ile	missense_variant	0.37	rifampicin	Uncertain significance
rpoB	761648	c.1842T>C	synonymous_variant	0.38	rifampicin
rpoB	761649	p.Ser615Pro	missense_variant	0.37	rifampicin
rpoB	761654	p.Glu616Asp	missense_variant	0.39	rifampicin
rpoB	761672	c.1866C>G	synonymous_variant	0.29	rifampicin
rpoB	761675	c.1869G>C	synonymous_variant	0.3	rifampicin
rpoB	761683	p.Leu626Arg	missense_variant	0.22	rifampicin
rpoB	761688	p.Ala628Thr	missense_variant	0.19	rifampicin
rpoB	761693	c.1887G>C	synonymous_variant	0.15	rifampicin
rpoB	761694	p.Ile630Val	missense_variant	0.15	rifampicin
rpoB	761937	p.Lys711Gln	missense_variant	0.18	rifampicin
rpoB	761945	c.2139G>C	synonymous_variant	0.22	rifampicin
rpoB	761951	c.2145G>C	synonymous_variant	0.25	rifampicin
rpoB	761955	p.Ile717Phe	missense_variant	0.25	rifampicin
rpoB	761961	p.Pro719Thr	missense_variant	0.3	rifampicin
rpoB	761974	p.His723Leu	missense_variant	0.37	rifampicin
rpoB	761990	c.2184G>C	synonymous_variant	0.36	rifampicin	Not assoc w R - Interim
rpoB	761997	p.Leu731Ile	missense_variant	0.35	rifampicin
rpoB	762003	p.Asn733Gln	missense_variant	0.35	rifampicin
rpoB	762009	p.Leu735Val	missense_variant	0.36	rifampicin
rpoB	762016	p.Glu737Ala	missense_variant	0.36	rifampicin
rpoB	762024	p.Val740Met	missense_variant	0.38	rifampicin
rpoB	762053	c.2247T>C	synonymous_variant	0.39	rifampicin	Not assoc w R - Interim
rpoB	762057	p.Ile751Val	missense_variant	0.4	rifampicin	Uncertain significance
rpoB	762062	c.2256T>C	synonymous_variant	0.4	rifampicin	Not assoc w R - Interim
rpoB	762065	c.2259T>C	synonymous_variant	0.4	rifampicin	Not assoc w R - Interim
rpoB	762083	c.2277T>C	synonymous_variant	0.29	rifampicin	Not assoc w R - Interim
rpoB	762086	c.2280G>C	synonymous_variant	0.28	rifampicin	Not assoc w R - Interim
rpoB	762110	c.2304G>C	synonymous_variant	0.23	rifampicin
rpoB	762114	p.Ile770Val	missense_variant	0.19	rifampicin	Uncertain significance
rpoB	762122	p.Asp772Glu	missense_variant	0.14	rifampicin
rpoB	762127	p.Val774Ala	missense_variant	0.15	rifampicin
rpoB	762143	c.2337T>C	synonymous_variant	0.35	rifampicin
rpoB	762149	c.2343G>C	synonymous_variant	0.39	rifampicin	Not assoc w R - Interim
rpoB	762156	p.Val784Ile	missense_variant	0.44	rifampicin
rpoB	762167	c.2361T>C	synonymous_variant	0.31	rifampicin	Not assoc w R - Interim
rpoB	762176	c.2370T>C	synonymous_variant	0.47	rifampicin	Not assoc w R - Interim
rpoB	762177	p.Arg791Thr	missense_variant	0.22	rifampicin
rpoB	762180	p.Asp792Ser	missense_variant	0.25	rifampicin
rpoB	762185	c.2379G>C	synonymous_variant	0.42	rifampicin	Not assoc w R - Interim
rpoB	762194	c.2388G>C	synonymous_variant	0.48	rifampicin	Not assoc w R - Interim
rpoB	762197	c.2391C>G	synonymous_variant	0.25	rifampicin
rpoB	762206	c.2400C>G	synonymous_variant	0.27	rifampicin
rpoB	762212	c.2406G>C	synonymous_variant	0.3	rifampicin	Not assoc w R - Interim
rpoB	762218	c.2412T>C	synonymous_variant	0.16	rifampicin
rpoB	762233	p.Pro810Ser	missense_variant	0.37	rifampicin
rpoB	762239	c.2433G>A	synonymous_variant	0.16	rifampicin
rpoB	762245	c.2439G>C	synonymous_variant	0.52	rifampicin	Not assoc w R - Interim
rpoB	762248	c.2442G>C	synonymous_variant	0.3	rifampicin
rpoB	762254	c.2448T>C	synonymous_variant	0.52	rifampicin	Not assoc w R - Interim
rpoB	762266	c.2460T>C	synonymous_variant	0.14	rifampicin
rpoB	762293	c.2487T>C	synonymous_variant	0.18	rifampicin	Not assoc w R - Interim
rpoB	762827	c.3021G>C	synonymous_variant	0.38	rifampicin	Not assoc w R - Interim
rpoB	762831	c.3025_3026delAGinsTC	synonymous_variant	0.44	rifampicin	Not assoc w R - Interim
rpoB	762855	p.Val1017Ile	missense_variant	0.72	rifampicin
rpoB	762858	p.Thr1018Ser	missense_variant	0.73	rifampicin
rpoC	762863	c.-507T>G	upstream_gene_variant	0.72	rifampicin
rpoB	762871	p.Met1022Thr	missense_variant	0.55	rifampicin
rpoB	762878	p.Ile1024Met	missense_variant	0.5	rifampicin
rpoB	762879	p.Met1025Leu	missense_variant	0.75	rifampicin	Uncertain significance
rpoB	762887	c.3081G>C	synonymous_variant	0.72	rifampicin	Not assoc w R - Interim
rpoC	762896	c.-474G>C	upstream_gene_variant	0.2	rifampicin
rpoB	762899	c.3093G>C	synonymous_variant	0.54	rifampicin	Not assoc w R - Interim
rpoC	762926	c.-444C>G	upstream_gene_variant	0.78	rifampicin
rpoB	762929	c.3123G>C	synonymous_variant	0.63	rifampicin	Not assoc w R - Interim
rpoB	762929	c.3123G>T	synonymous_variant	0.21	rifampicin	Not assoc w R - Interim
rpoC	762938	c.-432G>C	upstream_gene_variant	0.15	rifampicin
rpoC	762947	c.-423C>G	upstream_gene_variant	0.67	rifampicin
rpoB	762962	c.3156C>T	synonymous_variant	0.14	rifampicin	Not assoc w R - Interim
rpoC	762971	c.-399G>C	upstream_gene_variant	0.81	rifampicin
rpoC	762980	c.-390T>C	upstream_gene_variant	0.69	rifampicin
rpoC	762989	c.-381G>C	upstream_gene_variant	0.8	rifampicin
rpoB	762995	c.3189G>C	synonymous_variant	0.76	rifampicin	Not assoc w R - Interim
rpoB	763005	p.Cys1067Val	missense_variant	0.75	rifampicin
rpoB	763014	p.Met1070Leu	missense_variant	0.71	rifampicin
rpoB	763017	p.Gln1071Glu	missense_variant	0.73	rifampicin
rpoB	763028	c.3222T>C	synonymous_variant	0.74	rifampicin	Not assoc w R - Interim
rpoB	763031	c.3225T>C	synonymous_variant	0.74	rifampicin	Not assoc w R
rpoB	763038	p.Thr1078Ala	missense_variant	0.72	rifampicin
rpoC	763043	c.-327G>C	upstream_gene_variant	0.71	rifampicin
rpoB	763053	c.3247T>C	synonymous_variant	0.69	rifampicin	Not assoc w R - Interim
rpoB	763070	c.3264T>C	synonymous_variant	0.66	rifampicin	Not assoc w R - Interim
rpoB	763077	p.Val1091Thr	missense_variant	0.61	rifampicin
rpoC	763103	c.-267G>C	upstream_gene_variant	0.53	rifampicin
rpoB	763115	c.3309T>C	synonymous_variant	0.38	rifampicin	Not assoc w R - Interim
rpoB	763119	p.Asn1105Asp	missense_variant	0.34	rifampicin
rpoB	763127	c.3321G>C	synonymous_variant	0.31	rifampicin	Not assoc w R - Interim
rpoC	763133	c.-237G>C	upstream_gene_variant	0.19	rifampicin
rpoC	763456	c.87A>G	synonymous_variant	0.18	rifampicin	Not assoc w R - Interim
rpoC	763468	c.99G>C	synonymous_variant	0.28	rifampicin	Not assoc w R - Interim
rpoC	763483	c.114G>C	synonymous_variant	0.22	rifampicin
rpoC	763486	c.117T>C	synonymous_variant	0.36	rifampicin	Not assoc w R - Interim
rpoC	763492	c.123G>C	synonymous_variant	0.4	rifampicin	Not assoc w R - Interim
rpoC	763507	c.138G>C	synonymous_variant	0.37	rifampicin
rpoC	763528	c.159G>C	synonymous_variant	0.48	rifampicin
rpoC	763531	c.162G>C	synonymous_variant	0.48	rifampicin	Not assoc w R
rpoC	763534	c.165T>C	synonymous_variant	0.43	rifampicin
rpoC	763537	c.168C>G	synonymous_variant	0.38	rifampicin
rpoC	763546	c.177A>G	synonymous_variant	0.47	rifampicin	Not assoc w R - Interim
rpoC	763550	p.Tyr61Ala	missense_variant	0.46	rifampicin
rpoC	763570	c.201G>C	synonymous_variant	0.61	rifampicin	Not assoc w R - Interim
rpoC	763578	p.Phe70Tyr	missense_variant	0.58	rifampicin
rpoC	763585	c.216C>G	synonymous_variant	0.43	rifampicin
rpoC	763589	p.Ile74Val	missense_variant	0.47	rifampicin
rpoC	763606	c.237C>A	synonymous_variant	0.56	rifampicin
rpoC	763615	c.246G>C	synonymous_variant	0.55	rifampicin	Not assoc w R - Interim
rpoC	763618	c.249C>T	synonymous_variant	0.56	rifampicin
rpoC	763622	p.Ala85Ser	missense_variant	0.63	rifampicin	Uncertain significance
rpoC	763633	c.264T>C	synonymous_variant	0.23	rifampicin	Not assoc w R - Interim
rpoC	763636	c.267T>C	synonymous_variant	0.42	rifampicin
rpoC	763642	c.273G>C	synonymous_variant	0.7	rifampicin	Not assoc w R - Interim
rpoC	763647	p.Gly93Ala	missense_variant	0.4	rifampicin
rpoC	763655	p.Glu96Asn	missense_variant	0.38	rifampicin
rpoC	763660	c.291T>C	synonymous_variant	0.67	rifampicin	Not assoc w R - Interim
rpoC	763666	c.297G>C	synonymous_variant	0.25	rifampicin	Not assoc w R - Interim
rpoC	763669	c.300C>G	synonymous_variant	0.38	rifampicin	Not assoc w R - Interim
rpoC	763675	c.306C>G	synonymous_variant	0.27	rifampicin	Not assoc w R - Interim
rpoC	763696	c.327T>C	synonymous_variant	0.4	rifampicin	Not assoc w R - Interim
rpoC	763699	c.330G>T	synonymous_variant	0.33	rifampicin
rpoC	763708	c.339G>C	synonymous_variant	0.63	rifampicin
rpoC	763714	c.345G>C	synonymous_variant	0.6	rifampicin	Not assoc w R - Interim
rpoC	763717	c.348T>C	synonymous_variant	0.59	rifampicin	Not assoc w R - Interim
rpoC	763718	p.Leu117Val	missense_variant	0.25	rifampicin
rpoC	763723	c.354G>C	synonymous_variant	0.55	rifampicin
rpoC	763724	p.Asp119Asn	missense_variant	0.52	rifampicin
rpoC	763729	c.360G>C	synonymous_variant	0.52	rifampicin
rpoC	763732	c.363C>G	synonymous_variant	0.55	rifampicin
rpoC	763735	c.366G>C	synonymous_variant	0.52	rifampicin
rpoC	763744	c.375G>C	synonymous_variant	0.23	rifampicin
rpoC	763751	p.Ile128Val	missense_variant	0.56	rifampicin
rpoC	763765	c.396T>G	synonymous_variant	0.16	rifampicin	Not assoc w R - Interim
rpoC	763772	p.Val135Met	missense_variant	0.46	rifampicin
rpoC	763781	p.Ser138Glu	missense_variant	0.23	rifampicin
rpoC	764485	c.1116G>C	synonymous_variant	0.51	rifampicin
rpoC	764491	c.1122G>T	synonymous_variant	0.54	rifampicin
rpoC	764497	p.Glu376Asp	missense_variant	0.4	rifampicin
rpoC	764498	p.Ser377Ala	missense_variant	0.31	rifampicin
rpoC	764503	c.1134G>C	synonymous_variant	0.5	rifampicin
rpoC	764509	c.1140G>C	synonymous_variant	0.66	rifampicin	Not assoc w R - Interim
rpoC	764512	c.1143G>C	synonymous_variant	0.28	rifampicin
rpoC	764521	c.1152T>C	synonymous_variant	0.71	rifampicin	Not assoc w R - Interim
rpoC	764536	c.1167G>C	synonymous_variant	0.32	rifampicin
rpoC	764536	c.1167G>T	synonymous_variant	0.49	rifampicin	Not assoc w R - Interim
rpoC	764539	c.1170C>G	synonymous_variant	0.49	rifampicin	Not assoc w R - Interim
rpoC	764542	c.1173C>T	synonymous_variant	0.19	rifampicin	Not assoc w R - Interim
rpoC	764543	p.Thr392Ala	missense_variant	0.33	rifampicin
rpoC	764548	c.1179G>C	synonymous_variant	0.37	rifampicin
rpoC	764548	c.1179G>T	synonymous_variant	0.47	rifampicin	Not assoc w R - Interim
rpoC	764549	p.Pro394Val	missense_variant	0.51	rifampicin
rpoC	764560	c.1191T>C	synonymous_variant	0.14	rifampicin	Not assoc w R - Interim
rpoC	764566	c.1197C>G	synonymous_variant	0.75	rifampicin	Not assoc w R - Interim
rpoC	764572	c.1203G>C	synonymous_variant	0.55	rifampicin
rpoC	764573	p.Leu402Ile	missense_variant	0.32	rifampicin
rpoC	764578	c.1209C>G	synonymous_variant	0.32	rifampicin
rpoC	764581	c.1212T>C	synonymous_variant	0.85	rifampicin
rpoC	764582	p.Leu405Met	missense_variant	0.9	rifampicin
rpoC	764593	c.1224C>T	synonymous_variant	0.21	rifampicin
rpoC	764602	c.1233C>T	synonymous_variant	0.25	rifampicin
rpoC	764605	c.1236G>C	synonymous_variant	0.52	rifampicin	Not assoc w R - Interim
rpoC	764605	c.1236G>T	synonymous_variant	0.34	rifampicin
rpoC	764611	c.1242G>C	synonymous_variant	0.6	rifampicin
rpoC	764611	c.1242G>T	synonymous_variant	0.26	rifampicin	Not assoc w R - Interim
rpoC	764623	c.1254C>G	synonymous_variant	0.44	rifampicin	Not assoc w R - Interim
rpoC	764626	c.1257C>T	synonymous_variant	0.37	rifampicin	Not assoc w R - Interim
rpoC	764632	c.1263T>C	synonymous_variant	0.61	rifampicin	Not assoc w R - Interim
rpoC	764635	c.1266C>G	synonymous_variant	0.5	rifampicin
rpoC	764644	c.1275G>C	synonymous_variant	0.48	rifampicin	Not assoc w R - Interim
rpoC	764647	c.1278C>T	synonymous_variant	0.27	rifampicin
rpoC	764650	c.1281G>T	synonymous_variant	0.69	rifampicin	Not assoc w R - Interim
rpoC	764651	c.1282_1284delTCGinsAGC	synonymous_variant	0.38	rifampicin
rpoC	764656	c.1287C>G	synonymous_variant	0.24	rifampicin
rpoC	764659	c.1290C>T	synonymous_variant	0.19	rifampicin
rpoC	764662	c.1293G>C	synonymous_variant	0.49	rifampicin	Not assoc w R - Interim
rpoC	764665	c.1296C>T	synonymous_variant	0.28	rifampicin
rpoC	764668	c.1299C>T	synonymous_variant	0.21	rifampicin	Not assoc w R - Interim
rpoC	764671	c.1302G>C	synonymous_variant	0.41	rifampicin
rpoC	764677	c.1308C>G	synonymous_variant	0.36	rifampicin	Not assoc w R - Interim
rpoC	764678	p.Lys437Gln	missense_variant	0.32	rifampicin
rpoC	764681	p.Leu438Ile	missense_variant	0.22	rifampicin
rpoC	764692	c.1323C>T	synonymous_variant	0.25	rifampicin	Not assoc w R - Interim
rpoC	764703	p.Lys445Ser	missense_variant	0.25	rifampicin
rpoC	764706	p.Leu446Gln	missense_variant	0.65	rifampicin	Uncertain significance
rpoC	764713	c.1344G>C	synonymous_variant	0.34	rifampicin	Not assoc w R - Interim
rpoC	764731	c.1362G>C	synonymous_variant	0.57	rifampicin
rpoC	764737	c.1368G>C	synonymous_variant	0.36	rifampicin
rpoC	764743	c.1374G>A	synonymous_variant	0.21	rifampicin	Not assoc w R - Interim
rpoC	764746	c.1377G>T	synonymous_variant	0.2	rifampicin	Not assoc w R - Interim
rpoC	764755	p.Asp462Glu	missense_variant	0.19	rifampicin
rpoC	765903	p.Thr845Ser	missense_variant	0.24	rifampicin
rpoC	765907	c.2538G>C	synonymous_variant	0.25	rifampicin
rpoC	765923	p.Asn852Ala	missense_variant	0.27	rifampicin
rpoC	765937	c.2568T>C	synonymous_variant	0.3	rifampicin	Not assoc w R - Interim
rpoC	765940	c.2571A>T	synonymous_variant	0.29	rifampicin	Not assoc w R - Interim
rpoC	765947	c.2578T>C	synonymous_variant	0.3	rifampicin	Not assoc w R - Interim
rpoC	765958	c.2589C>G	synonymous_variant	0.3	rifampicin
rpoC	765962	c.2593T>C	synonymous_variant	0.3	rifampicin
rpoC	765967	c.2598C>T	synonymous_variant	0.31	rifampicin	Not assoc w R - Interim
rpoC	765988	c.2619G>C	synonymous_variant	0.31	rifampicin
rpoC	765991	c.2622C>G	synonymous_variant	0.29	rifampicin
rpoC	765994	c.2625A>T	synonymous_variant	0.29	rifampicin	Not assoc w R - Interim
rpoC	766003	c.2634G>C	synonymous_variant	0.28	rifampicin
rpoC	766009	c.2640G>C	synonymous_variant	0.28	rifampicin	Not assoc w R - Interim
rpoC	766021	c.2652G>C	synonymous_variant	0.23	rifampicin
rpoC	766027	c.2658G>C	synonymous_variant	0.16	rifampicin
mmpL5	775639	p.Ile948Val	missense_variant	1.0	bedaquiline	Not assoc w R - Interim
mmpL5	775639	p.Ile948Val	missense_variant	1.0	clofazimine	Not assoc w R
rpsL	781395	c.-165T>C	upstream_gene_variant	1.0	streptomycin	Not assoc w R
rrs	1471659	n.-187C>T	upstream_gene_variant	1.0	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1471985	n.140T>C	non_coding_transcript_exon_variant	0.15	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1471986	n.141C>T	non_coding_transcript_exon_variant	0.15	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472068	n.223T>G	non_coding_transcript_exon_variant	0.36	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472075	n.230A>G	non_coding_transcript_exon_variant	0.57	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin
					amikacin	Uncertain significance
rrs	1472078	n.233C>T	non_coding_transcript_exon_variant	0.62	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472102	n.257G>A	non_coding_transcript_exon_variant	0.19	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin
					amikacin	Uncertain significance
rrs	1472106	n.261G>A	non_coding_transcript_exon_variant	0.3	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472108	n.263C>T	non_coding_transcript_exon_variant	0.75	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472112	n.267C>T	non_coding_transcript_exon_variant	0.19	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472113	n.268T>C	non_coding_transcript_exon_variant	0.15	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472122	n.277G>T	non_coding_transcript_exon_variant	0.37	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472123	n.278A>T	non_coding_transcript_exon_variant	0.46	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472124	n.279C>T	non_coding_transcript_exon_variant	0.57	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin
					amikacin	Uncertain significance
rrs	1472150	n.305T>A	non_coding_transcript_exon_variant	0.76	kanamycin	Uncertain significance
					capreomycin	Not assoc w R
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472150	n.305T>G	non_coding_transcript_exon_variant	0.21	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472151	n.306C>A	non_coding_transcript_exon_variant	0.26	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472155	n.310C>T	non_coding_transcript_exon_variant	0.55	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472160	n.315C>T	non_coding_transcript_exon_variant	0.4	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472172	n.327T>C	non_coding_transcript_exon_variant	0.63	kanamycin	Uncertain significance
					capreomycin	Not assoc w R
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472225	n.380C>A	non_coding_transcript_exon_variant	0.43	kanamycin	Uncertain significance
					capreomycin	Not assoc w R
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472251	n.406G>A	non_coding_transcript_exon_variant	0.97	kanamycin	Uncertain significance
					capreomycin	Not assoc w R
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472258	n.413A>G	non_coding_transcript_exon_variant	0.3	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472259	n.414C>A	non_coding_transcript_exon_variant	0.46	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472282	n.437T>G	non_coding_transcript_exon_variant	0.38	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472284	n.439C>T	non_coding_transcript_exon_variant	0.34	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472285	n.440A>G	non_coding_transcript_exon_variant	0.41	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472286	n.441C>G	non_coding_transcript_exon_variant	0.5	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472289	n.444T>G	non_coding_transcript_exon_variant	0.23	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472290	n.445C>T	non_coding_transcript_exon_variant	0.2	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin
					amikacin	Uncertain significance
rrs	1472293	n.448C>A	non_coding_transcript_exon_variant	0.73	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472295	n.450A>C	non_coding_transcript_exon_variant	0.19	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472298	n.453_468delGTCCGGGTTCTCTCGGinsCGAA	non_coding_transcript_exon_variant	0.7	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472315	n.470T>G	non_coding_transcript_exon_variant	0.54	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin
					amikacin	Uncertain significance
rrs	1472325	n.480G>C	non_coding_transcript_exon_variant	0.27	kanamycin
					capreomycin
					streptomycin	Uncertain significance
					amikacin
rrs	1472328	n.483G>C	non_coding_transcript_exon_variant	0.52	kanamycin
					capreomycin
					streptomycin	Uncertain significance
					amikacin
rrs	1472330	n.485G>T	non_coding_transcript_exon_variant	0.23	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472332	n.487A>G	non_coding_transcript_exon_variant	0.46	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472333	n.488G>A	non_coding_transcript_exon_variant	0.46	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472338	n.493A>G	non_coding_transcript_exon_variant	0.8	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472344	n.499C>T	non_coding_transcript_exon_variant	0.84	kanamycin	Uncertain significance
					capreomycin	Not assoc w R
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472379	n.534T>C	non_coding_transcript_exon_variant	0.78	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472400	n.555C>T	non_coding_transcript_exon_variant	0.7	kanamycin	Uncertain significance
					capreomycin	Not assoc w R
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472412	n.567A>G	non_coding_transcript_exon_variant	0.32	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472416	n.571C>T	non_coding_transcript_exon_variant	0.43	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472422	n.577T>C	non_coding_transcript_exon_variant	0.5	kanamycin	Uncertain significance
					capreomycin	Not assoc w R
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472427	n.582T>G	non_coding_transcript_exon_variant	0.43	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472435	n.590T>C	non_coding_transcript_exon_variant	0.42	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472436	n.591G>T	non_coding_transcript_exon_variant	0.31	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472437	n.592T>G	non_coding_transcript_exon_variant	0.3	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472438	n.593T>C	non_coding_transcript_exon_variant	0.33	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472448	n.603T>C	non_coding_transcript_exon_variant	0.36	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472449	n.604C>T	non_coding_transcript_exon_variant	0.26	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472450	n.605A>C	non_coding_transcript_exon_variant	0.26	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472451	n.606C>T	non_coding_transcript_exon_variant	0.27	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472462	n.617T>G	non_coding_transcript_exon_variant	0.33	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472464	n.619A>G	non_coding_transcript_exon_variant	0.43	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472473	n.628G>T	non_coding_transcript_exon_variant	0.3	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472474	n.629C>G	non_coding_transcript_exon_variant	0.34	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472476	n.631A>G	non_coding_transcript_exon_variant	0.38	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472484	n.639A>T	non_coding_transcript_exon_variant	0.24	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472489	n.644A>T	non_coding_transcript_exon_variant	0.25	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472494	n.649A>G	non_coding_transcript_exon_variant	0.67	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472496	n.651T>A	non_coding_transcript_exon_variant	0.6	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin
					amikacin	Uncertain significance
rrs	1472498	n.653C>T	non_coding_transcript_exon_variant	0.77	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472507	n.662C>G	non_coding_transcript_exon_variant	0.36	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472513	n.668T>C	non_coding_transcript_exon_variant	0.25	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472517	n.672T>A	non_coding_transcript_exon_variant	0.3	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472518	n.673G>T	non_coding_transcript_exon_variant	0.33	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472530	n.685G>A	non_coding_transcript_exon_variant	0.42	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472537	n.692C>T	non_coding_transcript_exon_variant	0.42	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472544	n.699C>A	non_coding_transcript_exon_variant	0.37	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472545	n.700A>T	non_coding_transcript_exon_variant	0.33	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472549	n.704G>A	non_coding_transcript_exon_variant	0.31	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472558	n.713G>A	non_coding_transcript_exon_variant	0.24	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472566	n.721G>A	non_coding_transcript_exon_variant	0.33	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472569	n.724G>A	non_coding_transcript_exon_variant	0.24	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472571	n.726G>C	non_coding_transcript_exon_variant	0.42	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472579	n.734G>C	non_coding_transcript_exon_variant	0.25	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472581	n.736A>C	non_coding_transcript_exon_variant	0.32	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472581	n.736A>T	non_coding_transcript_exon_variant	0.66	kanamycin	Uncertain significance
					capreomycin	Not assoc w R
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472584	n.739A>T	non_coding_transcript_exon_variant	0.32	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472597	n.752G>A	non_coding_transcript_exon_variant	0.23	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472598	n.753A>C	non_coding_transcript_exon_variant	0.42	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472599	n.754G>T	non_coding_transcript_exon_variant	0.35	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472607	n.762G>A	non_coding_transcript_exon_variant	0.22	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472616	n.771G>A	non_coding_transcript_exon_variant	0.34	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472647	n.802C>T	non_coding_transcript_exon_variant	0.19	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472655	n.810G>A	non_coding_transcript_exon_variant	0.51	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472655	n.810G>T	non_coding_transcript_exon_variant	0.48	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472658	n.813G>A	non_coding_transcript_exon_variant	0.49	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472660	n.815T>C	non_coding_transcript_exon_variant	0.48	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472661	n.816A>G	non_coding_transcript_exon_variant	0.49	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472670	n.825_838delGGGTTTCCTTCCTTinsTGGATCCTTTCC	non_coding_transcript_exon_variant	0.44	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472686	n.842_844delATCinsTTT	non_coding_transcript_exon_variant	0.35	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472686	n.841_842delGAinsTT	non_coding_transcript_exon_variant	0.37	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472690	n.845C>A	non_coding_transcript_exon_variant	0.66	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472692	n.847T>C	non_coding_transcript_exon_variant	0.4	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472697	n.852T>C	non_coding_transcript_exon_variant	0.42	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472707	n.862A>T	non_coding_transcript_exon_variant	0.17	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472713	n.868T>C	non_coding_transcript_exon_variant	0.55	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472714	n.869A>G	non_coding_transcript_exon_variant	0.41	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472716	n.871C>T	non_coding_transcript_exon_variant	0.55	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472742	n.897C>T	non_coding_transcript_exon_variant	0.58	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472744	n.899A>G	non_coding_transcript_exon_variant	0.59	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472767	n.922G>A	non_coding_transcript_exon_variant	0.17	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472781	n.936C>T	non_coding_transcript_exon_variant	0.54	kanamycin	Uncertain significance
					capreomycin	Not assoc w R
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472790	n.945T>C	non_coding_transcript_exon_variant	0.37	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472793	n.948A>T	non_coding_transcript_exon_variant	0.54	kanamycin	Uncertain significance
					capreomycin	Not assoc w R
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472803	n.958T>A	non_coding_transcript_exon_variant	0.44	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472824	n.979T>A	non_coding_transcript_exon_variant	0.77	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472825	n.980G>A	non_coding_transcript_exon_variant	0.51	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472828	n.983T>C	non_coding_transcript_exon_variant	0.79	kanamycin	Uncertain significance
					capreomycin	Not assoc w R
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472836	n.991G>A	non_coding_transcript_exon_variant	0.25	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472837	n.992C>T	non_coding_transcript_exon_variant	0.23	kanamycin
					capreomycin
					streptomycin	Uncertain significance
					amikacin
rrs	1472840	n.995A>T	non_coding_transcript_exon_variant	0.46	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472844	n.999_1000insT	non_coding_transcript_exon_variant	0.43	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472849	n.1005delT	non_coding_transcript_exon_variant	0.43	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472857	n.1012_1016delAGGCGinsGGCGT	non_coding_transcript_exon_variant	0.43	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472869	n.1024_1025delGTinsCGG	non_coding_transcript_exon_variant	0.38	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472874	n.1029C>T	non_coding_transcript_exon_variant	0.48	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472875	n.1030T>G	non_coding_transcript_exon_variant	0.48	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472878	n.1033G>A	non_coding_transcript_exon_variant	0.2	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472880	n.1035G>A	non_coding_transcript_exon_variant	0.38	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472895	n.1050C>T	non_coding_transcript_exon_variant	0.91	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472951	n.1106T>C	non_coding_transcript_exon_variant	0.15	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472952	n.1107T>C	non_coding_transcript_exon_variant	0.23	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472953	n.1108G>A	non_coding_transcript_exon_variant	0.22	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472954	n.1109T>C	non_coding_transcript_exon_variant	0.27	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472955	n.1110C>T	non_coding_transcript_exon_variant	0.25	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472956	n.1111T>C	non_coding_transcript_exon_variant	0.74	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472957	n.1112C>T	non_coding_transcript_exon_variant	0.68	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472958	n.1113A>G	non_coding_transcript_exon_variant	0.28	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin
					amikacin	Uncertain significance
rrs	1472973	n.1128A>G	non_coding_transcript_exon_variant	0.35	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472973	n.1128A>T	non_coding_transcript_exon_variant	0.54	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin
					amikacin	Uncertain significance
rrs	1472974	n.1129A>G	non_coding_transcript_exon_variant	0.33	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472987	n.1142G>A	non_coding_transcript_exon_variant	0.4	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472988	n.1143T>C	non_coding_transcript_exon_variant	0.31	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin
					amikacin	Uncertain significance
rrs	1472989	n.1144G>A	non_coding_transcript_exon_variant	0.25	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472990	n.1145A>G	non_coding_transcript_exon_variant	0.78	kanamycin	Not assoc w R
					capreomycin	Not assoc w R
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472992	n.1147A>G	non_coding_transcript_exon_variant	0.26	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1473004	n.1159T>A	non_coding_transcript_exon_variant	0.14	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1473005	n.1160C>T	non_coding_transcript_exon_variant	0.3	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1473035	n.1190G>A	non_coding_transcript_exon_variant	0.97	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1473055	n.1210C>T	non_coding_transcript_exon_variant	0.92	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1473056	n.1211A>T	non_coding_transcript_exon_variant	0.98	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1473066	n.1221A>G	non_coding_transcript_exon_variant	0.94	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1473080	n.1235C>T	non_coding_transcript_exon_variant	0.32	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1473081	n.1236C>T	non_coding_transcript_exon_variant	0.32	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1473088	n.1243A>G	non_coding_transcript_exon_variant	0.98	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1473093	n.1248C>T	non_coding_transcript_exon_variant	0.56	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1473100	n.1255G>A	non_coding_transcript_exon_variant	0.99	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1473101	n.1256C>T	non_coding_transcript_exon_variant	0.3	kanamycin	Uncertain significance
					capreomycin
					streptomycin
					amikacin	Uncertain significance
rrs	1473102	n.1257C>T	non_coding_transcript_exon_variant	0.26	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1473104	n.1259C>T	non_coding_transcript_exon_variant	0.98	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1473110	n.1265T>G	non_coding_transcript_exon_variant	0.98	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1473111	n.1266A>G	non_coding_transcript_exon_variant	0.99	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1473115	n.1270G>T	non_coding_transcript_exon_variant	0.23	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1473121	n.1276T>C	non_coding_transcript_exon_variant	0.97	kanamycin	Uncertain significance
					capreomycin	Not assoc w R
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1473123	n.1278A>T	non_coding_transcript_exon_variant	0.74	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1473130	n.1285G>A	non_coding_transcript_exon_variant	0.36	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1473145	n.1300C>T	non_coding_transcript_exon_variant	0.64	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1473148	n.1303G>T	non_coding_transcript_exon_variant	0.35	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1473163	n.1318C>A	non_coding_transcript_exon_variant	0.34	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1473166	n.1321G>A	non_coding_transcript_exon_variant	0.65	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1473172	n.1327T>G	non_coding_transcript_exon_variant	0.37	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1473173	n.1328C>T	non_coding_transcript_exon_variant	0.73	kanamycin	Uncertain significance
					capreomycin	Not assoc w R
					streptomycin	Not assoc w R
					amikacin	Not assoc w R
rrs	1473221	n.1376C>T	non_coding_transcript_exon_variant	0.69	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1473252	n.1407T>C	non_coding_transcript_exon_variant	0.69	kanamycin	Not assoc w R
					capreomycin	Not assoc w R
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1473259	n.1414C>T	non_coding_transcript_exon_variant	0.71	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1473262	n.1417T>C	non_coding_transcript_exon_variant	0.27	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1473270	n.1425G>A	non_coding_transcript_exon_variant	0.16	kanamycin	Uncertain significance
					capreomycin
					streptomycin
					amikacin	Uncertain significance
rrs	1473276	n.1431A>C	non_coding_transcript_exon_variant	0.71	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1473276	n.1431A>G	non_coding_transcript_exon_variant	0.27	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1473277	n.1432G>A	non_coding_transcript_exon_variant	0.45	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin
					amikacin	Uncertain significance
rrs	1473283	n.1438T>C	non_coding_transcript_exon_variant	0.24	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin
					amikacin	Uncertain significance
rrs	1473284	n.1439A>T	non_coding_transcript_exon_variant	0.24	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1473287	n.1442_1449delCCTCGGGAinsG	non_coding_transcript_exon_variant	0.44	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1473300	n.1455C>T	non_coding_transcript_exon_variant	0.44	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1473301	n.1456T>C	non_coding_transcript_exon_variant	0.27	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1473301	n.1456T>G	non_coding_transcript_exon_variant	0.7	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1473314	n.1469A>G	non_coding_transcript_exon_variant	0.27	kanamycin
					capreomycin
					streptomycin	Uncertain significance
					amikacin
rrs	1473315	n.1470T>C	non_coding_transcript_exon_variant	0.36	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1473316	n.1471C>T	non_coding_transcript_exon_variant	0.96	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1473319	n.1474C>T	non_coding_transcript_exon_variant	0.27	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrl	1474001	n.344C>T	non_coding_transcript_exon_variant	1.0	capreomycin	Not assoc w R
rrl	1474001	n.344C>T	non_coding_transcript_exon_variant	1.0	linezolid	Not assoc w R
rrl	1474124	n.467G>C	non_coding_transcript_exon_variant	0.42	capreomycin
rrl	1474124	n.467G>C	non_coding_transcript_exon_variant	0.42	linezolid
rrl	1474125	n.468C>G	non_coding_transcript_exon_variant	0.42	capreomycin
rrl	1474125	n.468C>G	non_coding_transcript_exon_variant	0.42	linezolid
rrl	1474130	n.473C>T	non_coding_transcript_exon_variant	0.48	capreomycin	Uncertain significance
rrl	1474130	n.473C>T	non_coding_transcript_exon_variant	0.48	linezolid
rrl	1474140	n.483C>T	non_coding_transcript_exon_variant	0.57	capreomycin	Uncertain significance
rrl	1474140	n.483C>T	non_coding_transcript_exon_variant	0.57	linezolid	Uncertain significance
rrl	1474141	n.484G>C	non_coding_transcript_exon_variant	0.57	capreomycin
rrl	1474141	n.484G>C	non_coding_transcript_exon_variant	0.57	linezolid
rrl	1474142	n.485C>G	non_coding_transcript_exon_variant	0.57	capreomycin
rrl	1474142	n.485C>G	non_coding_transcript_exon_variant	0.57	linezolid
rrl	1474151	n.494C>T	non_coding_transcript_exon_variant	0.72	capreomycin	Uncertain significance
rrl	1474151	n.494C>T	non_coding_transcript_exon_variant	0.72	linezolid	Uncertain significance
rrl	1474155	n.498G>A	non_coding_transcript_exon_variant	0.72	capreomycin
rrl	1474155	n.498G>A	non_coding_transcript_exon_variant	0.72	linezolid
rrl	1474164	n.507C>T	non_coding_transcript_exon_variant	0.78	capreomycin
rrl	1474164	n.507C>T	non_coding_transcript_exon_variant	0.78	linezolid
rrl	1474171	n.514C>T	non_coding_transcript_exon_variant	0.56	capreomycin
rrl	1474171	n.514C>T	non_coding_transcript_exon_variant	0.56	linezolid
rrl	1474181	n.524C>A	non_coding_transcript_exon_variant	0.4	capreomycin
rrl	1474181	n.524C>A	non_coding_transcript_exon_variant	0.4	linezolid
rrl	1474181	n.524C>T	non_coding_transcript_exon_variant	0.46	capreomycin	Uncertain significance
rrl	1474181	n.524C>T	non_coding_transcript_exon_variant	0.46	linezolid
rrl	1474183	n.526T>C	non_coding_transcript_exon_variant	0.23	capreomycin	Uncertain significance
rrl	1474183	n.526T>C	non_coding_transcript_exon_variant	0.23	linezolid	Uncertain significance
rrl	1474184	n.527C>T	non_coding_transcript_exon_variant	0.86	capreomycin	Uncertain significance
rrl	1474184	n.527C>T	non_coding_transcript_exon_variant	0.86	linezolid	Uncertain significance
rrl	1474185	n.528G>A	non_coding_transcript_exon_variant	0.21	capreomycin	Uncertain significance
rrl	1474185	n.528G>A	non_coding_transcript_exon_variant	0.21	linezolid
rrl	1474186	n.529A>G	non_coding_transcript_exon_variant	0.2	capreomycin	Uncertain significance
rrl	1474186	n.529A>G	non_coding_transcript_exon_variant	0.2	linezolid	Uncertain significance
rrl	1474197	n.540C>T	non_coding_transcript_exon_variant	0.86	capreomycin	Uncertain significance
rrl	1474197	n.540C>T	non_coding_transcript_exon_variant	0.86	linezolid
rrl	1474199	n.542G>C	non_coding_transcript_exon_variant	0.5	capreomycin
rrl	1474199	n.542G>C	non_coding_transcript_exon_variant	0.5	linezolid
rrl	1474201	n.545delT	non_coding_transcript_exon_variant	0.44	capreomycin	Uncertain significance
rrl	1474201	n.545delT	non_coding_transcript_exon_variant	0.44	linezolid	Uncertain significance
rrl	1474201	n.545T>C	non_coding_transcript_exon_variant	0.42	capreomycin
rrl	1474201	n.545T>C	non_coding_transcript_exon_variant	0.42	linezolid
rrl	1474249	n.592G>T	non_coding_transcript_exon_variant	0.89	capreomycin	Uncertain significance
rrl	1474249	n.592G>T	non_coding_transcript_exon_variant	0.89	linezolid	Uncertain significance
rrl	1474269	n.612C>T	non_coding_transcript_exon_variant	0.39	capreomycin	Uncertain significance
rrl	1474269	n.612C>T	non_coding_transcript_exon_variant	0.39	linezolid	Uncertain significance
rrl	1474271	n.614A>G	non_coding_transcript_exon_variant	0.47	capreomycin
rrl	1474271	n.614A>G	non_coding_transcript_exon_variant	0.47	linezolid
rrl	1474272	n.615C>T	non_coding_transcript_exon_variant	0.47	capreomycin
rrl	1474272	n.615C>T	non_coding_transcript_exon_variant	0.47	linezolid
rrl	1474275	n.618T>G	non_coding_transcript_exon_variant	0.85	capreomycin
rrl	1474275	n.618T>G	non_coding_transcript_exon_variant	0.85	linezolid
rrl	1474280	n.623C>T	non_coding_transcript_exon_variant	0.27	capreomycin
rrl	1474280	n.623C>T	non_coding_transcript_exon_variant	0.27	linezolid
rrl	1474281	n.624A>G	non_coding_transcript_exon_variant	0.18	capreomycin
rrl	1474281	n.624A>G	non_coding_transcript_exon_variant	0.18	linezolid
rrl	1474288	n.631_651delCCTTTTCCTCTCCGGAGGAGGinsTGT	non_coding_transcript_exon_variant	0.73	capreomycin
rrl	1474288	n.631_651delCCTTTTCCTCTCCGGAGGAGGinsTGT	non_coding_transcript_exon_variant	0.73	linezolid
rrl	1474310	n.653T>G	non_coding_transcript_exon_variant	0.77	capreomycin
rrl	1474310	n.653T>G	non_coding_transcript_exon_variant	0.77	linezolid
rrl	1474315	n.658A>G	non_coding_transcript_exon_variant	0.19	capreomycin
rrl	1474315	n.658A>G	non_coding_transcript_exon_variant	0.19	linezolid
rrl	1474316	n.659T>C	non_coding_transcript_exon_variant	0.18	capreomycin
rrl	1474316	n.659T>C	non_coding_transcript_exon_variant	0.18	linezolid
rrl	1474317	n.660G>A	non_coding_transcript_exon_variant	0.18	capreomycin
rrl	1474317	n.660G>A	non_coding_transcript_exon_variant	0.18	linezolid
rrl	1474348	n.691C>T	non_coding_transcript_exon_variant	0.34	capreomycin	Uncertain significance
rrl	1474348	n.691C>T	non_coding_transcript_exon_variant	0.34	linezolid	Uncertain significance
rrl	1474351	n.694G>T	non_coding_transcript_exon_variant	0.86	capreomycin	Uncertain significance
rrl	1474351	n.694G>T	non_coding_transcript_exon_variant	0.86	linezolid	Uncertain significance
rrl	1474353	n.696A>G	non_coding_transcript_exon_variant	0.66	capreomycin	Uncertain significance
rrl	1474353	n.696A>G	non_coding_transcript_exon_variant	0.66	linezolid	Uncertain significance
rrl	1474354	n.697C>T	non_coding_transcript_exon_variant	0.32	capreomycin
rrl	1474354	n.697C>T	non_coding_transcript_exon_variant	0.32	linezolid
rrl	1474355	n.698A>G	non_coding_transcript_exon_variant	0.56	capreomycin	Uncertain significance
rrl	1474355	n.698A>G	non_coding_transcript_exon_variant	0.56	linezolid	Uncertain significance
rrl	1474362	n.705A>G	non_coding_transcript_exon_variant	0.88	capreomycin	Uncertain significance
rrl	1474362	n.705A>G	non_coding_transcript_exon_variant	0.88	linezolid	Uncertain significance
rrl	1474383	n.726G>T	non_coding_transcript_exon_variant	0.21	capreomycin
rrl	1474383	n.726G>T	non_coding_transcript_exon_variant	0.21	linezolid
rrl	1474387	n.730C>T	non_coding_transcript_exon_variant	0.87	capreomycin	Uncertain significance
rrl	1474387	n.730C>T	non_coding_transcript_exon_variant	0.87	linezolid	Uncertain significance
rrl	1474393	n.736A>G	non_coding_transcript_exon_variant	0.68	capreomycin
rrl	1474393	n.736A>G	non_coding_transcript_exon_variant	0.68	linezolid
rrl	1474402	n.745T>C	non_coding_transcript_exon_variant	0.75	capreomycin	Uncertain significance
rrl	1474402	n.745T>C	non_coding_transcript_exon_variant	0.75	linezolid	Uncertain significance
rrl	1474414	n.757_778delCCCACACGCGCATACGCGCGTGinsT	non_coding_transcript_exon_variant	0.59	capreomycin
rrl	1474414	n.757_778delCCCACACGCGCATACGCGCGTGinsT	non_coding_transcript_exon_variant	0.59	linezolid
rrl	1474414	n.757_776delCCCACACGCGCATACGCGCG	non_coding_transcript_exon_variant	0.3	capreomycin
rrl	1474414	n.757_776delCCCACACGCGCATACGCGCG	non_coding_transcript_exon_variant	0.3	linezolid
rrl	1474437	n.781_782delAA	non_coding_transcript_exon_variant	0.87	capreomycin	Uncertain significance
rrl	1474437	n.781_782delAA	non_coding_transcript_exon_variant	0.87	linezolid
rrl	1474448	n.791T>C	non_coding_transcript_exon_variant	0.72	capreomycin	Uncertain significance
rrl	1474448	n.791T>C	non_coding_transcript_exon_variant	0.72	linezolid
rrl	1474454	n.797G>A	non_coding_transcript_exon_variant	0.29	capreomycin	Uncertain significance
rrl	1474454	n.797G>A	non_coding_transcript_exon_variant	0.29	linezolid	Uncertain significance
rrl	1474467	n.810A>G	non_coding_transcript_exon_variant	0.8	capreomycin
rrl	1474467	n.810A>G	non_coding_transcript_exon_variant	0.8	linezolid
rrl	1474476	n.819C>T	non_coding_transcript_exon_variant	0.2	capreomycin
rrl	1474476	n.819C>T	non_coding_transcript_exon_variant	0.2	linezolid
rrl	1474483	n.826C>T	non_coding_transcript_exon_variant	0.26	capreomycin
rrl	1474483	n.826C>T	non_coding_transcript_exon_variant	0.26	linezolid
rrl	1474488	n.831G>T	non_coding_transcript_exon_variant	0.97	capreomycin	Uncertain significance
rrl	1474488	n.831G>T	non_coding_transcript_exon_variant	0.97	linezolid	Uncertain significance
rrl	1474495	n.838G>A	non_coding_transcript_exon_variant	0.78	capreomycin
rrl	1474495	n.838G>A	non_coding_transcript_exon_variant	0.78	linezolid
rrl	1474496	n.839C>G	non_coding_transcript_exon_variant	0.31	capreomycin	Uncertain significance
rrl	1474496	n.839C>G	non_coding_transcript_exon_variant	0.31	linezolid
rrl	1474497	n.840G>A	non_coding_transcript_exon_variant	0.31	capreomycin	Uncertain significance
rrl	1474497	n.840G>A	non_coding_transcript_exon_variant	0.31	linezolid	Uncertain significance
rrl	1474498	n.841G>T	non_coding_transcript_exon_variant	0.53	capreomycin
rrl	1474498	n.841G>T	non_coding_transcript_exon_variant	0.53	linezolid
rrl	1474505	n.848C>G	non_coding_transcript_exon_variant	0.52	capreomycin	Uncertain significance
rrl	1474505	n.848C>G	non_coding_transcript_exon_variant	0.52	linezolid	Uncertain significance
rrl	1474506	n.849C>T	non_coding_transcript_exon_variant	0.32	capreomycin	Uncertain significance
rrl	1474506	n.849C>T	non_coding_transcript_exon_variant	0.32	linezolid	Uncertain significance
rrl	1474507	n.850G>T	non_coding_transcript_exon_variant	0.18	capreomycin	Uncertain significance
rrl	1474507	n.850G>T	non_coding_transcript_exon_variant	0.18	linezolid	Uncertain significance
rrl	1474508	n.851C>T	non_coding_transcript_exon_variant	0.76	capreomycin	Uncertain significance
rrl	1474508	n.851C>T	non_coding_transcript_exon_variant	0.76	linezolid	Uncertain significance
rrl	1474516	n.859C>A	non_coding_transcript_exon_variant	0.97	capreomycin	Uncertain significance
rrl	1474516	n.859C>A	non_coding_transcript_exon_variant	0.97	linezolid	Uncertain significance
rrl	1474527	n.870T>C	non_coding_transcript_exon_variant	0.75	capreomycin
rrl	1474527	n.870T>C	non_coding_transcript_exon_variant	0.75	linezolid
rrl	1474528	n.871T>A	non_coding_transcript_exon_variant	0.22	capreomycin
rrl	1474528	n.871T>A	non_coding_transcript_exon_variant	0.22	linezolid
rrl	1474529	n.872A>G	non_coding_transcript_exon_variant	0.28	capreomycin
rrl	1474529	n.872A>G	non_coding_transcript_exon_variant	0.28	linezolid
rrl	1474530	n.873G>A	non_coding_transcript_exon_variant	0.22	capreomycin
rrl	1474530	n.873G>A	non_coding_transcript_exon_variant	0.22	linezolid
rrl	1474537	n.880G>A	non_coding_transcript_exon_variant	0.97	capreomycin	Uncertain significance
rrl	1474537	n.880G>A	non_coding_transcript_exon_variant	0.97	linezolid	Uncertain significance
rrl	1474539	n.882C>T	non_coding_transcript_exon_variant	0.21	capreomycin
rrl	1474539	n.882C>T	non_coding_transcript_exon_variant	0.21	linezolid
rrl	1474540	n.883T>G	non_coding_transcript_exon_variant	0.27	capreomycin
rrl	1474540	n.883T>G	non_coding_transcript_exon_variant	0.27	linezolid
rrl	1474541	n.884G>T	non_coding_transcript_exon_variant	0.21	capreomycin
rrl	1474541	n.884G>T	non_coding_transcript_exon_variant	0.21	linezolid
rrl	1474542	n.885A>G	non_coding_transcript_exon_variant	0.75	capreomycin
rrl	1474542	n.885A>G	non_coding_transcript_exon_variant	0.75	linezolid
rrl	1474551	n.894G>A	non_coding_transcript_exon_variant	0.29	capreomycin
rrl	1474551	n.894G>A	non_coding_transcript_exon_variant	0.29	linezolid
rrl	1474558	n.901G>A	non_coding_transcript_exon_variant	0.3	capreomycin	Uncertain significance
rrl	1474558	n.901G>A	non_coding_transcript_exon_variant	0.3	linezolid
rrl	1474584	n.927C>T	non_coding_transcript_exon_variant	0.28	capreomycin
rrl	1474584	n.927C>T	non_coding_transcript_exon_variant	0.28	linezolid
rrl	1474626	n.969T>C	non_coding_transcript_exon_variant	0.73	capreomycin	Uncertain significance
rrl	1474626	n.969T>C	non_coding_transcript_exon_variant	0.73	linezolid	Uncertain significance
rrl	1474627	n.970G>A	non_coding_transcript_exon_variant	0.18	capreomycin	Uncertain significance
rrl	1474627	n.970G>A	non_coding_transcript_exon_variant	0.18	linezolid	Uncertain significance
rrl	1474632	n.975G>T	non_coding_transcript_exon_variant	0.45	capreomycin	Uncertain significance
rrl	1474632	n.975G>T	non_coding_transcript_exon_variant	0.45	linezolid	Uncertain significance
rrl	1474634	n.977T>C	non_coding_transcript_exon_variant	0.52	capreomycin
rrl	1474634	n.977T>C	non_coding_transcript_exon_variant	0.52	linezolid
rrl	1474634	n.977T>G	non_coding_transcript_exon_variant	0.28	capreomycin
rrl	1474634	n.977T>G	non_coding_transcript_exon_variant	0.28	linezolid
rrl	1474636	n.979A>C	non_coding_transcript_exon_variant	0.98	capreomycin	Uncertain significance
rrl	1474636	n.979A>C	non_coding_transcript_exon_variant	0.98	linezolid	Uncertain significance
rrl	1474637	n.980C>T	non_coding_transcript_exon_variant	0.7	capreomycin	Uncertain significance
rrl	1474637	n.980C>T	non_coding_transcript_exon_variant	0.7	linezolid
rrl	1474638	n.981C>G	non_coding_transcript_exon_variant	0.98	capreomycin	Uncertain significance
rrl	1474638	n.981C>G	non_coding_transcript_exon_variant	0.98	linezolid	Uncertain significance
rrl	1474639	n.982G>C	non_coding_transcript_exon_variant	0.17	capreomycin	Uncertain significance
rrl	1474639	n.982G>C	non_coding_transcript_exon_variant	0.17	linezolid	Uncertain significance
rrl	1474640	n.983C>T	non_coding_transcript_exon_variant	0.55	capreomycin	Uncertain significance
rrl	1474640	n.983C>T	non_coding_transcript_exon_variant	0.55	linezolid
rrl	1474658	n.1001A>G	non_coding_transcript_exon_variant	0.25	capreomycin
rrl	1474658	n.1001A>G	non_coding_transcript_exon_variant	0.25	linezolid
rrl	1474663	n.1006C>T	non_coding_transcript_exon_variant	0.25	capreomycin	Uncertain significance
rrl	1474663	n.1006C>T	non_coding_transcript_exon_variant	0.25	linezolid	Uncertain significance
rrl	1474673	n.1016_1019delTACTinsCACA	non_coding_transcript_exon_variant	0.32	capreomycin
rrl	1474673	n.1016_1019delTACTinsCACA	non_coding_transcript_exon_variant	0.32	linezolid
rrl	1474677	n.1020A>G	non_coding_transcript_exon_variant	0.98	capreomycin	Uncertain significance
rrl	1474677	n.1020A>G	non_coding_transcript_exon_variant	0.98	linezolid	Uncertain significance
rrl	1474692	n.1035G>A	non_coding_transcript_exon_variant	0.26	capreomycin	Uncertain significance
rrl	1474692	n.1035G>A	non_coding_transcript_exon_variant	0.26	linezolid	Uncertain significance
rrl	1474709	n.1052G>A	non_coding_transcript_exon_variant	0.67	capreomycin
rrl	1474709	n.1052G>A	non_coding_transcript_exon_variant	0.67	linezolid
rrl	1474711	n.1054_1060delGGTGTAAinsTAGGTGT	non_coding_transcript_exon_variant	0.7	capreomycin
rrl	1474711	n.1054_1060delGGTGTAAinsTAGGTGT	non_coding_transcript_exon_variant	0.7	linezolid
rrl	1474711	n.1054_1060delGGTGTAAinsCGGGTTGT	non_coding_transcript_exon_variant	0.28	capreomycin
rrl	1474711	n.1054_1060delGGTGTAAinsCGGGTTGT	non_coding_transcript_exon_variant	0.28	linezolid
rrl	1474734	n.1077G>C	non_coding_transcript_exon_variant	0.32	capreomycin
rrl	1474734	n.1077G>C	non_coding_transcript_exon_variant	0.32	linezolid
rrl	1474734	n.1077G>T	non_coding_transcript_exon_variant	0.66	capreomycin	Uncertain significance
rrl	1474734	n.1077G>T	non_coding_transcript_exon_variant	0.66	linezolid	Uncertain significance
rrl	1474749	n.1092C>T	non_coding_transcript_exon_variant	0.65	capreomycin	Uncertain significance
rrl	1474749	n.1092C>T	non_coding_transcript_exon_variant	0.65	linezolid	Uncertain significance
rrl	1474753	n.1096_1097delACinsG	non_coding_transcript_exon_variant	0.34	capreomycin
rrl	1474753	n.1096_1097delACinsG	non_coding_transcript_exon_variant	0.34	linezolid
rrl	1474753	n.1097delC	non_coding_transcript_exon_variant	0.65	capreomycin	Uncertain significance
rrl	1474753	n.1097delC	non_coding_transcript_exon_variant	0.65	linezolid	Uncertain significance
rrl	1474760	n.1103A>G	non_coding_transcript_exon_variant	0.97	capreomycin	Uncertain significance
rrl	1474760	n.1103A>G	non_coding_transcript_exon_variant	0.97	linezolid	Uncertain significance
rrl	1474779	n.1122G>A	non_coding_transcript_exon_variant	0.59	capreomycin	Uncertain significance
rrl	1474779	n.1122G>A	non_coding_transcript_exon_variant	0.59	linezolid	Uncertain significance
rrl	1474780	n.1123C>T	non_coding_transcript_exon_variant	0.51	capreomycin	Uncertain significance
rrl	1474780	n.1123C>T	non_coding_transcript_exon_variant	0.51	linezolid	Uncertain significance
rrl	1474782	n.1125G>A	non_coding_transcript_exon_variant	0.6	capreomycin	Not assoc w R
rrl	1474782	n.1125G>A	non_coding_transcript_exon_variant	0.6	linezolid	Uncertain significance
rrl	1474794	n.1137C>T	non_coding_transcript_exon_variant	0.99	capreomycin	Uncertain significance
rrl	1474794	n.1137C>T	non_coding_transcript_exon_variant	0.99	linezolid	Uncertain significance
rrl	1474801	n.1144G>A	non_coding_transcript_exon_variant	0.44	capreomycin	Uncertain significance
rrl	1474801	n.1144G>A	non_coding_transcript_exon_variant	0.44	linezolid	Uncertain significance
rrl	1474802	n.1145T>C	non_coding_transcript_exon_variant	0.44	capreomycin	Uncertain significance
rrl	1474802	n.1145T>C	non_coding_transcript_exon_variant	0.44	linezolid	Uncertain significance
rrl	1474823	n.1166C>G	non_coding_transcript_exon_variant	0.61	capreomycin	Uncertain significance
rrl	1474823	n.1166C>G	non_coding_transcript_exon_variant	0.61	linezolid	Uncertain significance
rrl	1474824	n.1167A>G	non_coding_transcript_exon_variant	0.38	capreomycin	Uncertain significance
rrl	1474824	n.1167A>G	non_coding_transcript_exon_variant	0.38	linezolid	Uncertain significance
rrl	1474827	n.1170C>T	non_coding_transcript_exon_variant	0.18	capreomycin	Uncertain significance
rrl	1474827	n.1170C>T	non_coding_transcript_exon_variant	0.18	linezolid	Uncertain significance
rrl	1474830	n.1173A>G	non_coding_transcript_exon_variant	0.96	capreomycin	Uncertain significance
rrl	1474830	n.1173A>G	non_coding_transcript_exon_variant	0.96	linezolid	Uncertain significance
rrl	1474831	n.1174A>C	non_coding_transcript_exon_variant	0.45	capreomycin	Uncertain significance
rrl	1474831	n.1174A>C	non_coding_transcript_exon_variant	0.45	linezolid	Uncertain significance
rrl	1474831	n.1174A>G	non_coding_transcript_exon_variant	0.53	capreomycin	Uncertain significance
rrl	1474831	n.1174A>G	non_coding_transcript_exon_variant	0.53	linezolid
rrl	1474832	n.1175A>T	non_coding_transcript_exon_variant	0.41	capreomycin	Uncertain significance
rrl	1474832	n.1175A>T	non_coding_transcript_exon_variant	0.41	linezolid	Uncertain significance
rrl	1474864	n.1207C>T	non_coding_transcript_exon_variant	0.97	capreomycin	Not assoc w R
rrl	1474864	n.1207C>T	non_coding_transcript_exon_variant	0.97	linezolid	Uncertain significance
rrl	1474883	n.1226T>C	non_coding_transcript_exon_variant	0.16	capreomycin
rrl	1474883	n.1226T>C	non_coding_transcript_exon_variant	0.16	linezolid
rrl	1474901	n.1244A>G	non_coding_transcript_exon_variant	0.31	capreomycin
rrl	1474901	n.1244A>G	non_coding_transcript_exon_variant	0.31	linezolid
rrl	1474903	n.1246T>C	non_coding_transcript_exon_variant	0.41	capreomycin	Uncertain significance
rrl	1474903	n.1246T>C	non_coding_transcript_exon_variant	0.41	linezolid	Uncertain significance
rrl	1474904	n.1247G>C	non_coding_transcript_exon_variant	0.57	capreomycin	Uncertain significance
rrl	1474904	n.1247G>C	non_coding_transcript_exon_variant	0.57	linezolid	Uncertain significance
rrl	1474913	n.1256T>C	non_coding_transcript_exon_variant	0.73	capreomycin	Uncertain significance
rrl	1474913	n.1256T>C	non_coding_transcript_exon_variant	0.73	linezolid	Uncertain significance
rrl	1474932	n.1275C>T	non_coding_transcript_exon_variant	0.23	capreomycin	Uncertain significance
rrl	1474932	n.1275C>T	non_coding_transcript_exon_variant	0.23	linezolid	Uncertain significance
rrl	1474933	n.1276A>G	non_coding_transcript_exon_variant	0.25	capreomycin	Uncertain significance
rrl	1474933	n.1276A>G	non_coding_transcript_exon_variant	0.25	linezolid	Uncertain significance
rrl	1474934	n.1277C>T	non_coding_transcript_exon_variant	0.25	capreomycin	Uncertain significance
rrl	1474934	n.1277C>T	non_coding_transcript_exon_variant	0.25	linezolid	Uncertain significance
rrl	1474946	n.1289C>T	non_coding_transcript_exon_variant	0.2	capreomycin
rrl	1474946	n.1289C>T	non_coding_transcript_exon_variant	0.2	linezolid
rrl	1475016	n.1359C>T	non_coding_transcript_exon_variant	0.41	capreomycin
rrl	1475016	n.1359C>T	non_coding_transcript_exon_variant	0.41	linezolid
rrl	1475018	n.1361G>C	non_coding_transcript_exon_variant	0.52	capreomycin
rrl	1475018	n.1361G>C	non_coding_transcript_exon_variant	0.52	linezolid
rrl	1475026	n.1369G>C	non_coding_transcript_exon_variant	0.74	capreomycin
rrl	1475026	n.1369G>C	non_coding_transcript_exon_variant	0.74	linezolid
rrl	1475031	n.1374G>C	non_coding_transcript_exon_variant	0.79	capreomycin	Uncertain significance
rrl	1475031	n.1374G>C	non_coding_transcript_exon_variant	0.79	linezolid
rrl	1475059	n.1403_1404insTA	non_coding_transcript_exon_variant	0.84	capreomycin
rrl	1475059	n.1403_1404insTA	non_coding_transcript_exon_variant	0.84	linezolid
rrl	1475062	n.1405A>T	non_coding_transcript_exon_variant	0.82	capreomycin	Uncertain significance
rrl	1475062	n.1405A>T	non_coding_transcript_exon_variant	0.82	linezolid
rrl	1475065	n.1409_1411delCAA	non_coding_transcript_exon_variant	0.84	capreomycin
rrl	1475065	n.1409_1411delCAA	non_coding_transcript_exon_variant	0.84	linezolid
rrl	1475076	n.1419_1422delCCTTinsGCCCTA	non_coding_transcript_exon_variant	0.83	capreomycin
rrl	1475076	n.1419_1422delCCTTinsGCCCTA	non_coding_transcript_exon_variant	0.83	linezolid
rrl	1475080	n.1425_1426delCC	non_coding_transcript_exon_variant	0.83	capreomycin
rrl	1475080	n.1425_1426delCC	non_coding_transcript_exon_variant	0.83	linezolid
rrl	1475090	n.1433A>T	non_coding_transcript_exon_variant	0.82	capreomycin	Uncertain significance
rrl	1475090	n.1433A>T	non_coding_transcript_exon_variant	0.82	linezolid	Uncertain significance
rrl	1475104	n.1447T>A	non_coding_transcript_exon_variant	0.83	capreomycin	Uncertain significance
rrl	1475104	n.1447T>A	non_coding_transcript_exon_variant	0.83	linezolid	Uncertain significance
rrl	1475114	n.1457C>T	non_coding_transcript_exon_variant	0.83	capreomycin	Uncertain significance
rrl	1475114	n.1457C>T	non_coding_transcript_exon_variant	0.83	linezolid	Uncertain significance
rrl	1475124	n.1467A>T	non_coding_transcript_exon_variant	0.84	capreomycin	Uncertain significance
rrl	1475124	n.1467A>T	non_coding_transcript_exon_variant	0.84	linezolid	Uncertain significance
rrl	1475171	n.1514C>T	non_coding_transcript_exon_variant	0.57	capreomycin	Uncertain significance
rrl	1475171	n.1514C>T	non_coding_transcript_exon_variant	0.57	linezolid	Uncertain significance
rrl	1475172	n.1515A>G	non_coding_transcript_exon_variant	0.51	capreomycin
rrl	1475172	n.1515A>G	non_coding_transcript_exon_variant	0.51	linezolid
rrl	1475499	n.1842C>T	non_coding_transcript_exon_variant	0.18	capreomycin	Uncertain significance
rrl	1475499	n.1842C>T	non_coding_transcript_exon_variant	0.18	linezolid	Uncertain significance
rrl	1475515	n.1858G>A	non_coding_transcript_exon_variant	0.16	capreomycin
rrl	1475515	n.1858G>A	non_coding_transcript_exon_variant	0.16	linezolid
rrl	1475526	n.1869C>A	non_coding_transcript_exon_variant	0.2	capreomycin	Uncertain significance
rrl	1475526	n.1869C>A	non_coding_transcript_exon_variant	0.2	linezolid	Uncertain significance
rrl	1475531	n.1874C>T	non_coding_transcript_exon_variant	0.17	capreomycin	Uncertain significance
rrl	1475531	n.1874C>T	non_coding_transcript_exon_variant	0.17	linezolid	Uncertain significance
rrl	1475538	n.1881T>A	non_coding_transcript_exon_variant	0.17	capreomycin	Uncertain significance
rrl	1475538	n.1881T>A	non_coding_transcript_exon_variant	0.17	linezolid	Uncertain significance
rrl	1475539	n.1882A>T	non_coding_transcript_exon_variant	0.26	capreomycin	Uncertain significance
rrl	1475539	n.1882A>T	non_coding_transcript_exon_variant	0.26	linezolid	Uncertain significance
rrl	1475545	n.1888T>G	non_coding_transcript_exon_variant	0.32	capreomycin	Uncertain significance
rrl	1475545	n.1888T>G	non_coding_transcript_exon_variant	0.32	linezolid	Uncertain significance
rrl	1475548	n.1891C>T	non_coding_transcript_exon_variant	0.29	capreomycin
rrl	1475548	n.1891C>T	non_coding_transcript_exon_variant	0.29	linezolid
rrl	1475549	n.1892T>C	non_coding_transcript_exon_variant	0.3	capreomycin
rrl	1475549	n.1892T>C	non_coding_transcript_exon_variant	0.3	linezolid
rrl	1475655	n.1998T>G	non_coding_transcript_exon_variant	0.23	capreomycin	Uncertain significance
rrl	1475655	n.1998T>G	non_coding_transcript_exon_variant	0.23	linezolid
rrl	1475659	n.2002G>A	non_coding_transcript_exon_variant	0.49	capreomycin	Uncertain significance
rrl	1475659	n.2002G>A	non_coding_transcript_exon_variant	0.49	linezolid	Uncertain significance
rrl	1475672	n.2015C>T	non_coding_transcript_exon_variant	0.47	capreomycin	Uncertain significance
rrl	1475672	n.2015C>T	non_coding_transcript_exon_variant	0.47	linezolid	Uncertain significance
rrl	1475673	n.2016T>C	non_coding_transcript_exon_variant	0.51	capreomycin	Uncertain significance
rrl	1475673	n.2016T>C	non_coding_transcript_exon_variant	0.51	linezolid	Uncertain significance
rrl	1475686	n.2029C>G	non_coding_transcript_exon_variant	0.39	capreomycin
rrl	1475686	n.2029C>G	non_coding_transcript_exon_variant	0.39	linezolid
rrl	1475696	n.2039T>C	non_coding_transcript_exon_variant	0.69	capreomycin	Uncertain significance
rrl	1475696	n.2039T>C	non_coding_transcript_exon_variant	0.69	linezolid	Uncertain significance
rrl	1475699	n.2042C>T	non_coding_transcript_exon_variant	0.95	capreomycin	Uncertain significance
rrl	1475699	n.2042C>T	non_coding_transcript_exon_variant	0.95	linezolid	Uncertain significance
rrl	1475703	n.2046A>G	non_coding_transcript_exon_variant	0.69	capreomycin	Uncertain significance
rrl	1475703	n.2046A>G	non_coding_transcript_exon_variant	0.69	linezolid	Uncertain significance
rrl	1475715	n.2058G>C	non_coding_transcript_exon_variant	0.42	capreomycin
rrl	1475715	n.2058G>C	non_coding_transcript_exon_variant	0.42	linezolid
rrl	1475722	n.2065G>T	non_coding_transcript_exon_variant	0.24	capreomycin
rrl	1475722	n.2065G>T	non_coding_transcript_exon_variant	0.24	linezolid
rrl	1475751	n.2094C>A	non_coding_transcript_exon_variant	0.74	capreomycin
rrl	1475751	n.2094C>A	non_coding_transcript_exon_variant	0.74	linezolid
rrl	1475751	n.2094C>T	non_coding_transcript_exon_variant	0.23	capreomycin
rrl	1475751	n.2094C>T	non_coding_transcript_exon_variant	0.23	linezolid
rrl	1475752	n.2095C>T	non_coding_transcript_exon_variant	0.22	capreomycin	Uncertain significance
rrl	1475752	n.2095C>T	non_coding_transcript_exon_variant	0.22	linezolid	Uncertain significance
rrl	1475753	n.2096C>G	non_coding_transcript_exon_variant	0.23	capreomycin	Uncertain significance
rrl	1475753	n.2096C>G	non_coding_transcript_exon_variant	0.23	linezolid
rrl	1475754	n.2097G>A	non_coding_transcript_exon_variant	0.31	capreomycin
rrl	1475754	n.2097G>A	non_coding_transcript_exon_variant	0.31	linezolid
rrl	1475756	n.2099T>C	non_coding_transcript_exon_variant	0.71	capreomycin
rrl	1475756	n.2099T>C	non_coding_transcript_exon_variant	0.71	linezolid
rrl	1475758	n.2101A>G	non_coding_transcript_exon_variant	0.23	capreomycin
rrl	1475758	n.2101A>G	non_coding_transcript_exon_variant	0.23	linezolid
rrl	1475760	n.2103C>A	non_coding_transcript_exon_variant	0.44	capreomycin
rrl	1475760	n.2103C>A	non_coding_transcript_exon_variant	0.44	linezolid
rrl	1475761	n.2104_2108delCGCAAinsTTC	non_coding_transcript_exon_variant	0.41	capreomycin
rrl	1475761	n.2104_2108delCGCAAinsTTC	non_coding_transcript_exon_variant	0.41	linezolid
rrl	1475769	n.2112T>C	non_coding_transcript_exon_variant	0.23	capreomycin
rrl	1475769	n.2112T>C	non_coding_transcript_exon_variant	0.23	linezolid
rrl	1475774	n.2117C>T	non_coding_transcript_exon_variant	0.31	capreomycin
rrl	1475774	n.2117C>T	non_coding_transcript_exon_variant	0.31	linezolid
rrl	1475775	n.2118G>T	non_coding_transcript_exon_variant	0.25	capreomycin	Uncertain significance
rrl	1475775	n.2118G>T	non_coding_transcript_exon_variant	0.25	linezolid	Uncertain significance
rrl	1475777	n.2120A>T	non_coding_transcript_exon_variant	0.74	capreomycin
rrl	1475777	n.2120A>T	non_coding_transcript_exon_variant	0.74	linezolid
rrl	1475869	n.2212C>A	non_coding_transcript_exon_variant	0.32	capreomycin
rrl	1475869	n.2212C>A	non_coding_transcript_exon_variant	0.32	linezolid
rrl	1475881	n.2224T>C	non_coding_transcript_exon_variant	0.61	capreomycin
rrl	1475881	n.2224T>C	non_coding_transcript_exon_variant	0.61	linezolid
rrl	1475883	n.2226A>C	non_coding_transcript_exon_variant	0.64	capreomycin	Uncertain significance
rrl	1475883	n.2226A>C	non_coding_transcript_exon_variant	0.64	linezolid
rrl	1475883	n.2226A>T	non_coding_transcript_exon_variant	0.35	capreomycin	Uncertain significance
rrl	1475883	n.2226A>T	non_coding_transcript_exon_variant	0.35	linezolid	Uncertain significance
rrl	1475884	n.2227A>G	non_coding_transcript_exon_variant	0.61	capreomycin	Uncertain significance
rrl	1475884	n.2227A>G	non_coding_transcript_exon_variant	0.61	linezolid	Uncertain significance
rrl	1475896	n.2239A>G	non_coding_transcript_exon_variant	0.31	capreomycin
rrl	1475896	n.2239A>G	non_coding_transcript_exon_variant	0.31	linezolid
rrl	1475897	n.2240T>C	non_coding_transcript_exon_variant	0.31	capreomycin	Uncertain significance
rrl	1475897	n.2240T>C	non_coding_transcript_exon_variant	0.31	linezolid	Uncertain significance
rrl	1475898	n.2241A>G	non_coding_transcript_exon_variant	0.98	capreomycin	Uncertain significance
rrl	1475898	n.2241A>G	non_coding_transcript_exon_variant	0.98	linezolid
rrl	1475899	n.2242G>A	non_coding_transcript_exon_variant	0.98	capreomycin	Uncertain significance
rrl	1475899	n.2242G>A	non_coding_transcript_exon_variant	0.98	linezolid
rrl	1475900	n.2243A>G	non_coding_transcript_exon_variant	0.26	capreomycin	Uncertain significance
rrl	1475900	n.2243A>G	non_coding_transcript_exon_variant	0.26	linezolid
rrl	1475906	n.2249C>T	non_coding_transcript_exon_variant	0.47	capreomycin	Uncertain significance
rrl	1475906	n.2249C>T	non_coding_transcript_exon_variant	0.47	linezolid	Uncertain significance
rrl	1475916	n.2259C>G	non_coding_transcript_exon_variant	0.98	capreomycin	Uncertain significance
rrl	1475916	n.2259C>G	non_coding_transcript_exon_variant	0.98	linezolid	Uncertain significance
rrl	1475937	n.2280A>T	non_coding_transcript_exon_variant	0.96	capreomycin	Uncertain significance
rrl	1475937	n.2280A>T	non_coding_transcript_exon_variant	0.96	linezolid	Uncertain significance
rrl	1475943	n.2286G>A	non_coding_transcript_exon_variant	0.96	capreomycin	Uncertain significance
rrl	1475943	n.2286G>A	non_coding_transcript_exon_variant	0.96	linezolid	Uncertain significance
rrl	1475945	n.2288C>A	non_coding_transcript_exon_variant	0.58	capreomycin
rrl	1475945	n.2288C>A	non_coding_transcript_exon_variant	0.58	linezolid
rrl	1475952	n.2295A>G	non_coding_transcript_exon_variant	0.95	capreomycin	Uncertain significance
rrl	1475952	n.2295A>G	non_coding_transcript_exon_variant	0.95	linezolid	Uncertain significance
rrl	1475963	n.2306G>T	non_coding_transcript_exon_variant	0.38	capreomycin
rrl	1475963	n.2306G>T	non_coding_transcript_exon_variant	0.38	linezolid
rrl	1475970	n.2313C>T	non_coding_transcript_exon_variant	0.93	capreomycin	Uncertain significance
rrl	1475970	n.2313C>T	non_coding_transcript_exon_variant	0.93	linezolid	Uncertain significance
rrl	1475975	n.2318C>T	non_coding_transcript_exon_variant	0.72	capreomycin	Uncertain significance
rrl	1475975	n.2318C>T	non_coding_transcript_exon_variant	0.72	linezolid	Uncertain significance
rrl	1475977	n.2320A>G	non_coding_transcript_exon_variant	0.91	capreomycin	Uncertain significance
rrl	1475977	n.2320A>G	non_coding_transcript_exon_variant	0.91	linezolid	Uncertain significance
rrl	1475978	n.2321C>T	non_coding_transcript_exon_variant	0.37	capreomycin	Uncertain significance
rrl	1475978	n.2321C>T	non_coding_transcript_exon_variant	0.37	linezolid	Uncertain significance
rrl	1475988	n.2331A>G	non_coding_transcript_exon_variant	0.87	capreomycin	Not assoc w R
rrl	1475988	n.2331A>G	non_coding_transcript_exon_variant	0.87	linezolid	Uncertain significance
rrl	1475993	n.2336C>T	non_coding_transcript_exon_variant	0.48	capreomycin	Uncertain significance
rrl	1475993	n.2336C>T	non_coding_transcript_exon_variant	0.48	linezolid	Uncertain significance
rrl	1475995	n.2338G>C	non_coding_transcript_exon_variant	0.29	capreomycin
rrl	1475995	n.2338G>C	non_coding_transcript_exon_variant	0.29	linezolid
rrl	1475996	n.2339T>G	non_coding_transcript_exon_variant	0.13	capreomycin
rrl	1475996	n.2339T>G	non_coding_transcript_exon_variant	0.13	linezolid
rrl	1475997	n.2340A>T	non_coding_transcript_exon_variant	0.75	capreomycin	Uncertain significance
rrl	1475997	n.2340A>T	non_coding_transcript_exon_variant	0.75	linezolid	Uncertain significance
rrl	1475998	n.2341C>T	non_coding_transcript_exon_variant	0.75	capreomycin
rrl	1475998	n.2341C>T	non_coding_transcript_exon_variant	0.75	linezolid	Uncertain significance
rrl	1476000	n.2343G>A	non_coding_transcript_exon_variant	0.21	capreomycin
rrl	1476000	n.2343G>A	non_coding_transcript_exon_variant	0.21	linezolid
rrl	1476001	n.2344T>C	non_coding_transcript_exon_variant	0.81	capreomycin	Uncertain significance
rrl	1476001	n.2344T>C	non_coding_transcript_exon_variant	0.81	linezolid	Uncertain significance
rrl	1476030	n.2373A>G	non_coding_transcript_exon_variant	0.62	capreomycin	Uncertain significance
rrl	1476030	n.2373A>G	non_coding_transcript_exon_variant	0.62	linezolid
rrl	1476032	n.2375C>A	non_coding_transcript_exon_variant	0.34	capreomycin
rrl	1476032	n.2375C>A	non_coding_transcript_exon_variant	0.34	linezolid
rrl	1476033	n.2376T>G	non_coding_transcript_exon_variant	0.24	capreomycin
rrl	1476033	n.2376T>G	non_coding_transcript_exon_variant	0.24	linezolid
rrl	1476034	n.2377C>G	non_coding_transcript_exon_variant	0.38	capreomycin	Uncertain significance
rrl	1476034	n.2377C>G	non_coding_transcript_exon_variant	0.38	linezolid
rrl	1476040	n.2383C>T	non_coding_transcript_exon_variant	0.46	capreomycin
rrl	1476040	n.2383C>T	non_coding_transcript_exon_variant	0.46	linezolid
rrl	1476044	n.2387T>G	non_coding_transcript_exon_variant	0.24	capreomycin	Uncertain significance
rrl	1476044	n.2387T>G	non_coding_transcript_exon_variant	0.24	linezolid
rrl	1476045	n.2388G>T	non_coding_transcript_exon_variant	0.35	capreomycin	Uncertain significance
rrl	1476045	n.2388G>T	non_coding_transcript_exon_variant	0.35	linezolid
rrl	1476047	n.2390G>T	non_coding_transcript_exon_variant	0.35	capreomycin
rrl	1476047	n.2390G>T	non_coding_transcript_exon_variant	0.35	linezolid
rrl	1476049	n.2392C>T	non_coding_transcript_exon_variant	0.58	capreomycin	Uncertain significance
rrl	1476049	n.2392C>T	non_coding_transcript_exon_variant	0.58	linezolid	Uncertain significance
rrl	1476110	n.2453G>T	non_coding_transcript_exon_variant	0.2	capreomycin	Uncertain significance
rrl	1476110	n.2453G>T	non_coding_transcript_exon_variant	0.2	linezolid	Uncertain significance
rrl	1476115	n.2458T>C	non_coding_transcript_exon_variant	0.33	capreomycin	Uncertain significance
rrl	1476115	n.2458T>C	non_coding_transcript_exon_variant	0.33	linezolid	Uncertain significance
rrl	1476130	n.2473G>A	non_coding_transcript_exon_variant	0.44	capreomycin	Uncertain significance
rrl	1476130	n.2473G>A	non_coding_transcript_exon_variant	0.44	linezolid	Uncertain significance
rrl	1476131	n.2474C>T	non_coding_transcript_exon_variant	0.71	capreomycin	Uncertain significance
rrl	1476131	n.2474C>T	non_coding_transcript_exon_variant	0.71	linezolid	Uncertain significance
rrl	1476141	n.2484A>G	non_coding_transcript_exon_variant	0.19	capreomycin	Uncertain significance
rrl	1476141	n.2484A>G	non_coding_transcript_exon_variant	0.19	linezolid	Uncertain significance
rrl	1476153	n.2496T>C	non_coding_transcript_exon_variant	0.24	capreomycin	Uncertain significance
rrl	1476153	n.2496T>C	non_coding_transcript_exon_variant	0.24	linezolid	Uncertain significance
rrl	1476164	n.2507A>G	non_coding_transcript_exon_variant	0.63	capreomycin	Uncertain significance
rrl	1476164	n.2507A>G	non_coding_transcript_exon_variant	0.63	linezolid	Uncertain significance
rrl	1476165	n.2508T>G	non_coding_transcript_exon_variant	0.17	capreomycin	Not assoc w R
rrl	1476165	n.2508T>G	non_coding_transcript_exon_variant	0.17	linezolid	Uncertain significance
rrl	1476179	n.2522C>T	non_coding_transcript_exon_variant	0.23	capreomycin
rrl	1476179	n.2522C>T	non_coding_transcript_exon_variant	0.23	linezolid
rrl	1476194	n.2537A>G	non_coding_transcript_exon_variant	0.92	capreomycin	Not assoc w R
rrl	1476194	n.2537A>G	non_coding_transcript_exon_variant	0.92	linezolid	Uncertain significance
rrl	1476195	n.2538C>A	non_coding_transcript_exon_variant	0.2	capreomycin	Uncertain significance
rrl	1476195	n.2538C>A	non_coding_transcript_exon_variant	0.2	linezolid	Uncertain significance
rrl	1476200	n.2543A>T	non_coding_transcript_exon_variant	0.87	capreomycin	Not assoc w R
rrl	1476200	n.2543A>T	non_coding_transcript_exon_variant	0.87	linezolid	Uncertain significance
rrl	1476201	n.2544C>T	non_coding_transcript_exon_variant	0.75	capreomycin	Not assoc w R
rrl	1476201	n.2544C>T	non_coding_transcript_exon_variant	0.75	linezolid	Uncertain significance
rrl	1476204	n.2547C>A	non_coding_transcript_exon_variant	0.23	capreomycin	Uncertain significance
rrl	1476204	n.2547C>A	non_coding_transcript_exon_variant	0.23	linezolid	Uncertain significance
rrl	1476211	n.2554G>T	non_coding_transcript_exon_variant	0.15	capreomycin	Uncertain significance
rrl	1476211	n.2554G>T	non_coding_transcript_exon_variant	0.15	linezolid	Uncertain significance
rrl	1476212	n.2555T>C	non_coding_transcript_exon_variant	0.16	capreomycin	Uncertain significance
rrl	1476212	n.2555T>C	non_coding_transcript_exon_variant	0.16	linezolid	Uncertain significance
rrl	1476214	n.2557G>T	non_coding_transcript_exon_variant	0.75	capreomycin	Uncertain significance
rrl	1476214	n.2557G>T	non_coding_transcript_exon_variant	0.75	linezolid	Uncertain significance
rrl	1476215	n.2558C>T	non_coding_transcript_exon_variant	0.8	capreomycin	Uncertain significance
rrl	1476215	n.2558C>T	non_coding_transcript_exon_variant	0.8	linezolid	Uncertain significance
rrl	1476221	n.2564T>C	non_coding_transcript_exon_variant	0.18	capreomycin	Uncertain significance
rrl	1476221	n.2564T>C	non_coding_transcript_exon_variant	0.18	linezolid	Uncertain significance
rrl	1476224	n.2567A>G	non_coding_transcript_exon_variant	0.65	capreomycin	Uncertain significance
rrl	1476224	n.2567A>G	non_coding_transcript_exon_variant	0.65	linezolid	Uncertain significance
rrl	1476225	n.2568T>G	non_coding_transcript_exon_variant	0.29	capreomycin	Uncertain significance
rrl	1476225	n.2568T>G	non_coding_transcript_exon_variant	0.29	linezolid	Uncertain significance
rrl	1476227	n.2570C>T	non_coding_transcript_exon_variant	0.22	capreomycin
rrl	1476227	n.2570C>T	non_coding_transcript_exon_variant	0.22	linezolid	Uncertain significance
rrl	1476229	n.2572C>T	non_coding_transcript_exon_variant	0.19	capreomycin	Uncertain significance
rrl	1476229	n.2572C>T	non_coding_transcript_exon_variant	0.19	linezolid
rrl	1476245	n.2588C>T	non_coding_transcript_exon_variant	0.49	capreomycin	Uncertain significance
rrl	1476245	n.2588C>T	non_coding_transcript_exon_variant	0.49	linezolid	Uncertain significance
rrl	1476250	n.2593C>G	non_coding_transcript_exon_variant	0.42	capreomycin	Uncertain significance
rrl	1476250	n.2593C>G	non_coding_transcript_exon_variant	0.42	linezolid	Uncertain significance
rrl	1476251	n.2594T>C	non_coding_transcript_exon_variant	0.49	capreomycin	Uncertain significance
rrl	1476251	n.2594T>C	non_coding_transcript_exon_variant	0.49	linezolid	Uncertain significance
rrl	1476252	n.2595T>G	non_coding_transcript_exon_variant	0.59	capreomycin	Uncertain significance
rrl	1476252	n.2595T>G	non_coding_transcript_exon_variant	0.59	linezolid	Uncertain significance
rrl	1476253	n.2596A>G	non_coding_transcript_exon_variant	0.36	capreomycin
rrl	1476253	n.2596A>G	non_coding_transcript_exon_variant	0.36	linezolid
rrl	1476255	n.2598A>G	non_coding_transcript_exon_variant	0.18	capreomycin	Uncertain significance
rrl	1476255	n.2598A>G	non_coding_transcript_exon_variant	0.18	linezolid
rrl	1476256	n.2599A>G	non_coding_transcript_exon_variant	0.47	capreomycin	Uncertain significance
rrl	1476256	n.2599A>G	non_coding_transcript_exon_variant	0.47	linezolid	Uncertain significance
rrl	1476257	n.2600G>C	non_coding_transcript_exon_variant	0.44	capreomycin	Uncertain significance
rrl	1476257	n.2600G>C	non_coding_transcript_exon_variant	0.44	linezolid	Uncertain significance
rrl	1476260	n.2603A>G	non_coding_transcript_exon_variant	0.96	capreomycin	Not assoc w R
rrl	1476260	n.2603A>G	non_coding_transcript_exon_variant	0.96	linezolid	Uncertain significance
rrl	1476280	n.2623A>C	non_coding_transcript_exon_variant	0.58	capreomycin	Uncertain significance
rrl	1476280	n.2623A>C	non_coding_transcript_exon_variant	0.58	linezolid	Uncertain significance
rrl	1476281	n.2624T>C	non_coding_transcript_exon_variant	0.38	capreomycin	Uncertain significance
rrl	1476281	n.2624T>C	non_coding_transcript_exon_variant	0.38	linezolid	Uncertain significance
rrl	1476293	n.2636C>T	non_coding_transcript_exon_variant	0.58	capreomycin	Uncertain significance
rrl	1476293	n.2636C>T	non_coding_transcript_exon_variant	0.58	linezolid	Uncertain significance
rrl	1476294	n.2637A>G	non_coding_transcript_exon_variant	0.81	capreomycin	Uncertain significance
rrl	1476294	n.2637A>G	non_coding_transcript_exon_variant	0.81	linezolid	Uncertain significance
rrl	1476295	n.2638C>G	non_coding_transcript_exon_variant	0.95	capreomycin	Uncertain significance
rrl	1476295	n.2638C>G	non_coding_transcript_exon_variant	0.95	linezolid	Uncertain significance
rrl	1476296	n.2639C>T	non_coding_transcript_exon_variant	0.95	capreomycin	Uncertain significance
rrl	1476296	n.2639C>T	non_coding_transcript_exon_variant	0.95	linezolid	Uncertain significance
rrl	1476297	n.2640C>G	non_coding_transcript_exon_variant	0.45	capreomycin	Uncertain significance
rrl	1476297	n.2640C>G	non_coding_transcript_exon_variant	0.45	linezolid	Uncertain significance
rrl	1476297	n.2640C>T	non_coding_transcript_exon_variant	0.42	capreomycin	Uncertain significance
rrl	1476297	n.2640C>T	non_coding_transcript_exon_variant	0.42	linezolid	Uncertain significance
rrl	1476298	n.2641C>G	non_coding_transcript_exon_variant	0.13	capreomycin	Uncertain significance
rrl	1476298	n.2641C>G	non_coding_transcript_exon_variant	0.13	linezolid	Uncertain significance
rrl	1476299	n.2642C>G	non_coding_transcript_exon_variant	0.14	capreomycin
rrl	1476299	n.2642C>G	non_coding_transcript_exon_variant	0.14	linezolid
rrl	1476300	n.2643G>T	non_coding_transcript_exon_variant	0.27	capreomycin
rrl	1476300	n.2643G>T	non_coding_transcript_exon_variant	0.27	linezolid
rrl	1476301	n.2644A>T	non_coding_transcript_exon_variant	0.64	capreomycin	Uncertain significance
rrl	1476301	n.2644A>T	non_coding_transcript_exon_variant	0.64	linezolid	Uncertain significance
rrl	1476302	n.2645G>A	non_coding_transcript_exon_variant	0.35	capreomycin	Uncertain significance
rrl	1476302	n.2645G>A	non_coding_transcript_exon_variant	0.35	linezolid	Uncertain significance
rrl	1476308	n.2651G>C	non_coding_transcript_exon_variant	0.14	capreomycin
rrl	1476308	n.2651G>C	non_coding_transcript_exon_variant	0.14	linezolid
rrl	1476309	n.2652G>C	non_coding_transcript_exon_variant	0.13	capreomycin	Uncertain significance
rrl	1476309	n.2652G>C	non_coding_transcript_exon_variant	0.13	linezolid	Uncertain significance
rrl	1476311	n.2654G>C	non_coding_transcript_exon_variant	0.95	capreomycin	Uncertain significance
rrl	1476311	n.2654G>C	non_coding_transcript_exon_variant	0.95	linezolid	Uncertain significance
rrl	1476312	n.2655T>C	non_coding_transcript_exon_variant	0.82	capreomycin	Uncertain significance
rrl	1476312	n.2655T>C	non_coding_transcript_exon_variant	0.82	linezolid	Uncertain significance
rrl	1476313	n.2656G>A	non_coding_transcript_exon_variant	0.54	capreomycin	Uncertain significance
rrl	1476313	n.2656G>A	non_coding_transcript_exon_variant	0.54	linezolid	Uncertain significance
rrl	1476332	n.2675G>C	non_coding_transcript_exon_variant	0.54	capreomycin	Uncertain significance
rrl	1476332	n.2675G>C	non_coding_transcript_exon_variant	0.54	linezolid	Uncertain significance
rrl	1476336	n.2679C>T	non_coding_transcript_exon_variant	0.16	capreomycin
rrl	1476336	n.2679C>T	non_coding_transcript_exon_variant	0.16	linezolid
rrl	1476338	n.2681C>T	non_coding_transcript_exon_variant	0.53	capreomycin	Uncertain significance
rrl	1476338	n.2681C>T	non_coding_transcript_exon_variant	0.53	linezolid	Uncertain significance
rrl	1476353	n.2696G>T	non_coding_transcript_exon_variant	0.47	capreomycin	Uncertain significance
rrl	1476353	n.2696G>T	non_coding_transcript_exon_variant	0.47	linezolid	Uncertain significance
rrl	1476357	n.2700T>C	non_coding_transcript_exon_variant	0.26	capreomycin
rrl	1476357	n.2700T>C	non_coding_transcript_exon_variant	0.26	linezolid
rrl	1476358	n.2701T>C	non_coding_transcript_exon_variant	0.7	capreomycin	Uncertain significance
rrl	1476358	n.2701T>C	non_coding_transcript_exon_variant	0.7	linezolid	Uncertain significance
rrl	1476359	n.2702C>G	non_coding_transcript_exon_variant	0.3	capreomycin	Uncertain significance
rrl	1476359	n.2702C>G	non_coding_transcript_exon_variant	0.3	linezolid	Uncertain significance
rrl	1476368	n.2711T>C	non_coding_transcript_exon_variant	0.18	capreomycin	Uncertain significance
rrl	1476368	n.2711T>C	non_coding_transcript_exon_variant	0.18	linezolid
rrl	1476369	n.2712C>T	non_coding_transcript_exon_variant	0.52	capreomycin	Uncertain significance
rrl	1476369	n.2712C>T	non_coding_transcript_exon_variant	0.52	linezolid	Uncertain significance
rrl	1476372	n.2715T>C	non_coding_transcript_exon_variant	0.46	capreomycin	Uncertain significance
rrl	1476372	n.2715T>C	non_coding_transcript_exon_variant	0.46	linezolid	Uncertain significance
rrl	1476381	n.2724G>C	non_coding_transcript_exon_variant	0.26	capreomycin	Uncertain significance
rrl	1476381	n.2724G>C	non_coding_transcript_exon_variant	0.26	linezolid	Uncertain significance
rrl	1476382	n.2725A>G	non_coding_transcript_exon_variant	0.71	capreomycin	Uncertain significance
rrl	1476382	n.2725A>G	non_coding_transcript_exon_variant	0.71	linezolid	Uncertain significance
rrl	1476383	n.2726T>A	non_coding_transcript_exon_variant	0.53	capreomycin	Uncertain significance
rrl	1476383	n.2726T>A	non_coding_transcript_exon_variant	0.53	linezolid	Uncertain significance
rrl	1476408	n.2751G>A	non_coding_transcript_exon_variant	0.22	capreomycin	Uncertain significance
rrl	1476408	n.2751G>A	non_coding_transcript_exon_variant	0.22	linezolid	Uncertain significance
rrl	1476411	n.2754G>A	non_coding_transcript_exon_variant	0.27	capreomycin
rrl	1476411	n.2754G>A	non_coding_transcript_exon_variant	0.27	linezolid
rrl	1476425	n.2768G>T	non_coding_transcript_exon_variant	0.45	capreomycin	Uncertain significance
rrl	1476425	n.2768G>T	non_coding_transcript_exon_variant	0.45	linezolid	Uncertain significance
rrl	1476428	n.2771C>A	non_coding_transcript_exon_variant	0.21	capreomycin
rrl	1476428	n.2771C>A	non_coding_transcript_exon_variant	0.21	linezolid
rrl	1476428	n.2771C>T	non_coding_transcript_exon_variant	0.68	capreomycin	Not assoc w R
rrl	1476428	n.2771C>T	non_coding_transcript_exon_variant	0.68	linezolid	Uncertain significance
rrl	1476429	n.2772A>C	non_coding_transcript_exon_variant	0.57	capreomycin	Uncertain significance
rrl	1476429	n.2772A>C	non_coding_transcript_exon_variant	0.57	linezolid	Uncertain significance
rrl	1476463	n.2806C>T	non_coding_transcript_exon_variant	0.22	capreomycin
rrl	1476463	n.2806C>T	non_coding_transcript_exon_variant	0.22	linezolid
rrl	1476466	n.2809C>T	non_coding_transcript_exon_variant	0.52	capreomycin	Not assoc w R
rrl	1476466	n.2809C>T	non_coding_transcript_exon_variant	0.52	linezolid	Uncertain significance
rrl	1476481	n.2824T>C	non_coding_transcript_exon_variant	0.85	capreomycin	Not assoc w R
rrl	1476481	n.2824T>C	non_coding_transcript_exon_variant	0.85	linezolid	Uncertain significance
rrl	1476506	n.2849T>C	non_coding_transcript_exon_variant	0.86	capreomycin	Not assoc w R
rrl	1476506	n.2849T>C	non_coding_transcript_exon_variant	0.86	linezolid	Uncertain significance
rrl	1476513	n.2856G>T	non_coding_transcript_exon_variant	0.4	capreomycin
rrl	1476513	n.2856G>T	non_coding_transcript_exon_variant	0.4	linezolid
rrl	1476514	n.2857C>T	non_coding_transcript_exon_variant	0.32	capreomycin	Uncertain significance
rrl	1476514	n.2857C>T	non_coding_transcript_exon_variant	0.32	linezolid	Uncertain significance
rrl	1476515	n.2858C>T	non_coding_transcript_exon_variant	0.65	capreomycin	Uncertain significance
rrl	1476515	n.2858C>T	non_coding_transcript_exon_variant	0.65	linezolid
rrl	1476517	n.2860C>T	non_coding_transcript_exon_variant	0.24	capreomycin	Uncertain significance
rrl	1476517	n.2860C>T	non_coding_transcript_exon_variant	0.24	linezolid
rrl	1476519	n.2862C>G	non_coding_transcript_exon_variant	0.25	capreomycin	Uncertain significance
rrl	1476519	n.2862C>G	non_coding_transcript_exon_variant	0.25	linezolid	Uncertain significance
rrl	1476523	n.2866T>C	non_coding_transcript_exon_variant	0.52	capreomycin	Uncertain significance
rrl	1476523	n.2866T>C	non_coding_transcript_exon_variant	0.52	linezolid	Uncertain significance
rrl	1476524	n.2867C>A	non_coding_transcript_exon_variant	0.66	capreomycin	Uncertain significance
rrl	1476524	n.2867C>A	non_coding_transcript_exon_variant	0.66	linezolid	Uncertain significance
rrl	1476524	n.2867C>T	non_coding_transcript_exon_variant	0.28	capreomycin
rrl	1476524	n.2867C>T	non_coding_transcript_exon_variant	0.28	linezolid
rrl	1476525	n.2868A>G	non_coding_transcript_exon_variant	0.9	capreomycin	Uncertain significance
rrl	1476525	n.2868A>G	non_coding_transcript_exon_variant	0.9	linezolid	Uncertain significance
rrl	1476528	n.2871A>G	non_coding_transcript_exon_variant	0.38	capreomycin	Uncertain significance
rrl	1476528	n.2871A>G	non_coding_transcript_exon_variant	0.38	linezolid
rrl	1476530	n.2873C>T	non_coding_transcript_exon_variant	0.31	capreomycin	Uncertain significance
rrl	1476530	n.2873C>T	non_coding_transcript_exon_variant	0.31	linezolid	Uncertain significance
rrl	1476536	n.2879G>A	non_coding_transcript_exon_variant	0.9	capreomycin	Uncertain significance
rrl	1476536	n.2879G>A	non_coding_transcript_exon_variant	0.9	linezolid	Uncertain significance
rrl	1476538	n.2881A>G	non_coding_transcript_exon_variant	0.71	capreomycin	Uncertain significance
rrl	1476538	n.2881A>G	non_coding_transcript_exon_variant	0.71	linezolid	Uncertain significance
rrl	1476539	n.2882A>G	non_coding_transcript_exon_variant	0.82	capreomycin	Uncertain significance
rrl	1476539	n.2882A>G	non_coding_transcript_exon_variant	0.82	linezolid	Uncertain significance
rrl	1476540	n.2883C>G	non_coding_transcript_exon_variant	0.54	capreomycin	Uncertain significance
rrl	1476540	n.2883C>G	non_coding_transcript_exon_variant	0.54	linezolid	Uncertain significance
rrl	1476542	n.2885T>C	non_coding_transcript_exon_variant	0.23	capreomycin
rrl	1476542	n.2885T>C	non_coding_transcript_exon_variant	0.23	linezolid
rrl	1476547	n.2890C>T	non_coding_transcript_exon_variant	0.33	capreomycin	Uncertain significance
rrl	1476547	n.2890C>T	non_coding_transcript_exon_variant	0.33	linezolid	Uncertain significance
rrl	1476567	n.2910C>T	non_coding_transcript_exon_variant	0.38	capreomycin	Uncertain significance
rrl	1476567	n.2910C>T	non_coding_transcript_exon_variant	0.38	linezolid	Uncertain significance
rrl	1476584	n.2927C>T	non_coding_transcript_exon_variant	0.88	capreomycin	Not assoc w R
rrl	1476584	n.2927C>T	non_coding_transcript_exon_variant	0.88	linezolid	Uncertain significance
rrl	1476585	n.2928A>G	non_coding_transcript_exon_variant	0.76	capreomycin	Uncertain significance
rrl	1476585	n.2928A>G	non_coding_transcript_exon_variant	0.76	linezolid	Uncertain significance
rrl	1476594	n.2937C>A	non_coding_transcript_exon_variant	0.32	capreomycin
rrl	1476594	n.2937C>A	non_coding_transcript_exon_variant	0.32	linezolid
rrl	1476600	n.2943A>C	non_coding_transcript_exon_variant	0.47	capreomycin
rrl	1476600	n.2943A>C	non_coding_transcript_exon_variant	0.47	linezolid
rrl	1476603	n.2946G>T	non_coding_transcript_exon_variant	0.28	capreomycin
rrl	1476603	n.2946G>T	non_coding_transcript_exon_variant	0.28	linezolid
rrl	1476607	n.2950C>T	non_coding_transcript_exon_variant	0.24	capreomycin	Uncertain significance
rrl	1476607	n.2950C>T	non_coding_transcript_exon_variant	0.24	linezolid	Uncertain significance
rrl	1476608	n.2951C>G	non_coding_transcript_exon_variant	0.75	capreomycin	Uncertain significance
rrl	1476608	n.2951C>G	non_coding_transcript_exon_variant	0.75	linezolid	Uncertain significance
rrl	1476614	n.2957A>T	non_coding_transcript_exon_variant	0.69	capreomycin
rrl	1476614	n.2957A>T	non_coding_transcript_exon_variant	0.69	linezolid
rrl	1476616	n.2959A>G	non_coding_transcript_exon_variant	0.63	capreomycin
rrl	1476616	n.2959A>G	non_coding_transcript_exon_variant	0.63	linezolid
rrl	1476619	n.2962C>T	non_coding_transcript_exon_variant	0.66	capreomycin	Not assoc w R
rrl	1476619	n.2962C>T	non_coding_transcript_exon_variant	0.66	linezolid	Uncertain significance
rrl	1476628	n.2971T>G	non_coding_transcript_exon_variant	0.53	capreomycin
rrl	1476628	n.2971T>G	non_coding_transcript_exon_variant	0.53	linezolid
rrl	1476629	n.2972C>A	non_coding_transcript_exon_variant	0.63	capreomycin	Uncertain significance
rrl	1476629	n.2972C>A	non_coding_transcript_exon_variant	0.63	linezolid
rrl	1476630	n.2973A>G	non_coding_transcript_exon_variant	0.3	capreomycin	Uncertain significance
rrl	1476630	n.2973A>G	non_coding_transcript_exon_variant	0.3	linezolid	Uncertain significance
rrl	1476633	n.2976A>G	non_coding_transcript_exon_variant	0.32	capreomycin
rrl	1476633	n.2976A>G	non_coding_transcript_exon_variant	0.32	linezolid
rrl	1476661	n.3004A>G	non_coding_transcript_exon_variant	0.2	capreomycin	Uncertain significance
rrl	1476661	n.3004A>G	non_coding_transcript_exon_variant	0.2	linezolid	Uncertain significance
rrl	1476664	n.3007T>A	non_coding_transcript_exon_variant	0.17	capreomycin
rrl	1476664	n.3007T>A	non_coding_transcript_exon_variant	0.17	linezolid
rrl	1476665	n.3008T>G	non_coding_transcript_exon_variant	0.17	capreomycin	Uncertain significance
rrl	1476665	n.3008T>G	non_coding_transcript_exon_variant	0.17	linezolid	Uncertain significance
rrl	1476668	n.3011C>T	non_coding_transcript_exon_variant	0.28	capreomycin
rrl	1476668	n.3011C>T	non_coding_transcript_exon_variant	0.28	linezolid
rrl	1476675	n.3018C>G	non_coding_transcript_exon_variant	0.14	capreomycin	Uncertain significance
rrl	1476675	n.3018C>G	non_coding_transcript_exon_variant	0.14	linezolid	Uncertain significance
rpsA	1833641	p.Asn34Asp	missense_variant	0.19	pyrazinamide
rpsA	1833646	c.105T>C	synonymous_variant	0.23	pyrazinamide	Not assoc w R - Interim
rpsA	1833652	c.111C>T	synonymous_variant	0.34	pyrazinamide
rpsA	1833661	c.120A>G	synonymous_variant	0.5	pyrazinamide
rpsA	1833667	c.126C>T	synonymous_variant	0.52	pyrazinamide
rpsA	1833668	p.Ile43Val	missense_variant	0.52	pyrazinamide
rpsA	1833676	c.135A>G	synonymous_variant	0.55	pyrazinamide
rpsA	1833679	c.138G>C	synonymous_variant	0.55	pyrazinamide
rpsA	1833685	c.144G>T	synonymous_variant	0.54	pyrazinamide
rpsA	1833688	c.147C>T	synonymous_variant	0.51	pyrazinamide
rpsA	1833694	c.153G>C	synonymous_variant	0.61	pyrazinamide
rpsA	1833727	c.186G>C	synonymous_variant	0.59	pyrazinamide
rpsA	1833732	p.Pro64Leu	missense_variant	0.67	pyrazinamide
rpsA	1833736	c.195C>T	synonymous_variant	0.68	pyrazinamide
rpsA	1833742	c.201A>G	synonymous_variant	0.68	pyrazinamide
rpsA	1833770	p.Asn77Asp	missense_variant	0.69	pyrazinamide
rpsA	1833776	p.Val79Ile	missense_variant	0.63	pyrazinamide
rpsA	1833781	c.240T>C	synonymous_variant	0.63	pyrazinamide
rpsA	1833790	c.249T>C	synonymous_variant	0.58	pyrazinamide
rpsA	1833797	p.Val86Ile	missense_variant	0.5	pyrazinamide	Uncertain significance
rpsA	1833808	c.267G>C	synonymous_variant	0.25	pyrazinamide
rpsA	1833856	c.315A>G	synonymous_variant	0.28	pyrazinamide
rpsA	1833859	c.318C>T	synonymous_variant	0.18	pyrazinamide
rpsA	1833874	c.333T>C	synonymous_variant	0.47	pyrazinamide
rpsA	1833893	p.AlaLeu118ArgIle	missense_variant	0.51	pyrazinamide
rpsA	1833905	p.Lys122Glu	missense_variant	0.47	pyrazinamide
rpsA	1833912	p.Glu124Gly	missense_variant	0.45	pyrazinamide
rpsA	1833915	p.Ala125Val	missense_variant	0.45	pyrazinamide	Uncertain significance
rpsA	1833921	p.Lys127Thr	missense_variant	0.45	pyrazinamide
rpsA	1833926	p.Thr129Ser	missense_variant	0.46	pyrazinamide
rpsA	1833949	c.408T>C	synonymous_variant	0.63	pyrazinamide
rpsA	1833952	c.411C>T	synonymous_variant	0.38	pyrazinamide
rpsA	1833955	c.414G>C	synonymous_variant	0.44	pyrazinamide
rpsA	1833961	c.420C>G	synonymous_variant	0.37	pyrazinamide
rpsA	1833970	c.429G>C	synonymous_variant	0.74	pyrazinamide
rpsA	1833979	c.438T>C	synonymous_variant	0.78	pyrazinamide
rpsA	1833994	c.453G>C	synonymous_variant	0.78	pyrazinamide
rpsA	1833997	c.456G>C	synonymous_variant	0.31	pyrazinamide
rpsA	1834000	c.459G>C	synonymous_variant	0.26	pyrazinamide
rpsA	1834009	c.468C>T	synonymous_variant	0.69	pyrazinamide
rpsA	1834012	c.471G>C	synonymous_variant	0.74	pyrazinamide
rpsA	1834015	c.474G>C	synonymous_variant	0.28	pyrazinamide
rpsA	1834015	c.474G>T	synonymous_variant	0.46	pyrazinamide
rpsA	1834024	c.483G>C	synonymous_variant	0.62	pyrazinamide
rpsA	1834034	p.Ile165Val	missense_variant	0.4	pyrazinamide
rpsA	1834039	c.498C>T	synonymous_variant	0.27	pyrazinamide
rpsA	1834040	p.Lys167Arg	missense_variant	0.72	pyrazinamide
rpsA	1834046	p.Ile169Leu	missense_variant	0.41	pyrazinamide
rpsA	1834051	c.510G>A	synonymous_variant	0.27	pyrazinamide
rpsA	1834054	c.513C>G	synonymous_variant	0.7	pyrazinamide
rpsA	1834063	c.522C>T	synonymous_variant	0.41	pyrazinamide
rpsA	1834069	c.528G>C	synonymous_variant	0.25	pyrazinamide
rpsA	1834093	c.552G>C	synonymous_variant	0.59	pyrazinamide
rpsA	1834096	c.555G>C	synonymous_variant	0.37	pyrazinamide
rpsA	1834102	c.561T>C	synonymous_variant	0.13	pyrazinamide
rpsA	1834114	c.573G>C	synonymous_variant	0.39	pyrazinamide
rpsA	1834123	c.582C>T	synonymous_variant	0.17	pyrazinamide
rpsA	1834135	c.594G>C	synonymous_variant	0.14	pyrazinamide
rpsA	1834189	c.648G>C	synonymous_variant	0.19	pyrazinamide
rpsA	1834195	c.654G>C	synonymous_variant	0.47	pyrazinamide
rpsA	1834213	c.672G>A	synonymous_variant	0.41	pyrazinamide
rpsA	1834228	c.687C>T	synonymous_variant	0.63	pyrazinamide
rpsA	1834234	c.693G>C	synonymous_variant	0.62	pyrazinamide
rpsA	1834240	c.699T>C	synonymous_variant	0.52	pyrazinamide
rpsA	1834246	c.705G>T	synonymous_variant	0.63	pyrazinamide
rpsA	1834249	c.708T>C	synonymous_variant	0.69	pyrazinamide
rpsA	1834261	c.720A>G	synonymous_variant	0.71	pyrazinamide	Not assoc w R - Interim
rpsA	1834264	c.723G>C	synonymous_variant	0.7	pyrazinamide
rpsA	1834285	c.744G>C	synonymous_variant	0.14	pyrazinamide
rpsA	1834294	c.753G>C	synonymous_variant	0.72	pyrazinamide
rpsA	1834298	p.Gln253Glu	missense_variant	0.73	pyrazinamide
rpsA	1834303	c.762T>C	synonymous_variant	0.14	pyrazinamide
rpsA	1834306	c.765T>C	synonymous_variant	0.73	pyrazinamide
rpsA	1834307	p.Asp256Gln	missense_variant	0.68	pyrazinamide
rpsA	1834312	c.771G>A	synonymous_variant	0.59	pyrazinamide
rpsA	1834318	c.777C>G	synonymous_variant	0.14	pyrazinamide	Not assoc w R - Interim
rpsA	1834327	c.786G>T	synonymous_variant	0.72	pyrazinamide
rpsA	1834348	c.807T>C	synonymous_variant	0.67	pyrazinamide	Not assoc w R - Interim
rpsA	1834354	c.813G>C	synonymous_variant	0.63	pyrazinamide	Not assoc w R - Interim
rpsA	1834357	c.816T>C	synonymous_variant	0.62	pyrazinamide
rpsA	1834360	c.819G>C	synonymous_variant	0.62	pyrazinamide
rpsA	1834361	c.820T>C	synonymous_variant	0.62	pyrazinamide
rpsA	1834366	c.825A>G	synonymous_variant	0.62	pyrazinamide	Not assoc w R - Interim
rpsA	1834375	c.834G>C	synonymous_variant	0.49	pyrazinamide
rpsA	1834378	c.837T>C	synonymous_variant	0.53	pyrazinamide	Not assoc w R - Interim
rpsA	1834387	c.846C>T	synonymous_variant	0.51	pyrazinamide
rpsA	1834394	c.853_854insA	frameshift_variant	0.52	pyrazinamide	Uncertain significance
rpsA	1834398	c.858delC	frameshift_variant	0.5	pyrazinamide	Uncertain significance
rpsA	1834411	c.870T>C	synonymous_variant	0.48	pyrazinamide
rpsA	1834417	c.876G>C	synonymous_variant	0.47	pyrazinamide
rpsA	1834423	c.882G>C	synonymous_variant	0.41	pyrazinamide
rpsA	1834427	p.Ile296Val	missense_variant	0.39	pyrazinamide	Uncertain significance
rpsA	1834435	c.894G>C	synonymous_variant	0.37	pyrazinamide
rpsA	1834451	c.910T>C	synonymous_variant	0.35	pyrazinamide
rpsA	1834459	c.918G>C	synonymous_variant	0.35	pyrazinamide
rpsA	1834465	c.924T>C	synonymous_variant	0.13	pyrazinamide
rpsA	1834468	c.927A>G	synonymous_variant	0.24	pyrazinamide
rpsA	1834474	c.933C>G	synonymous_variant	0.29	pyrazinamide
rpsA	1834486	p.Glu315Asp	missense_variant	0.27	pyrazinamide
rpsA	1834489	c.948T>C	synonymous_variant	0.3	pyrazinamide
rpsA	1834504	c.963G>C	synonymous_variant	0.27	pyrazinamide
rpsA	1834522	c.981C>G	synonymous_variant	0.25	pyrazinamide
rpsA	1834523	p.Glu328Gln	missense_variant	0.3	pyrazinamide
rpsA	1834540	c.999G>C	synonymous_variant	0.24	pyrazinamide
rpsA	1834546	p.Asp335Glu	missense_variant	0.24	pyrazinamide
rpsA	1834552	c.1013_1015delTTG	disruptive_inframe_deletion	0.24	pyrazinamide
rpsA	1834558	c.1017_1018insAAG	conservative_inframe_insertion	0.23	pyrazinamide
rpsA	1834570	p.Asp343Glu	missense_variant	0.22	pyrazinamide
rpsA	1834572	p.Ala344Val	missense_variant	0.22	pyrazinamide
rpsA	1834574	p.Met345Phe	missense_variant	0.21	pyrazinamide
tlyA	1917972	c.33A>G	synonymous_variant	1.0	capreomycin	Not assoc w R
PPE35	2168149	p.Pro822Ser	missense_variant	1.0	pyrazinamide	Not assoc w R
PPE35	2170892	c.-280G>A	upstream_gene_variant	1.0	pyrazinamide
Rv1979c	2223293	c.-129A>G	upstream_gene_variant	1.0	bedaquiline	Not assoc w R - Interim
Rv1979c	2223293	c.-129A>G	upstream_gene_variant	1.0	clofazimine	Not assoc w R
Rv2680	2995848	c.-257G>A	upstream_gene_variant	1.0	capreomycin
Rv2752c	3064717	p.Leu492Arg	missense_variant	1.0	levofloxacin	Uncertain significance
					moxifloxacin	Uncertain significance
					isoniazid	Uncertain significance
					rifampicin	Uncertain significance
					ethambutol	Uncertain significance
fbiD	3338887	c.-231G>A	upstream_gene_variant	1.0	pretomanid
					delamanid
					clofazimine
fbiD	3339040	c.-78T>C	upstream_gene_variant	1.0	pretomanid
					delamanid
					clofazimine
Rv3083	3448507	c.5_*1408del	frameshift_variant&stop_lost&splice_region_variant	1.0	ethionamide	Uncertain significance
fbiB	3642874	p.Leu447Arg	missense_variant	1.0	pretomanid
					delamanid	Uncertain significance
					clofazimine	Uncertain significance
clpC1	4039610	c.1095G>C	synonymous_variant	0.37	pyrazinamide
clpC1	4039616	c.1089G>C	synonymous_variant	0.33	pyrazinamide
clpC1	4039637	p.Ile356Val	missense_variant	0.26	pyrazinamide
clpC1	4039640	c.1065C>G	synonymous_variant	0.26	pyrazinamide
clpC1	4039643	p.His354Glu	missense_variant	0.25	pyrazinamide
clpC1	4039652	p.Thr351Ser	missense_variant	0.22	pyrazinamide
clpC1	4039655	c.1050G>C	synonymous_variant	0.23	pyrazinamide
clpC1	4039661	p.Gly348Glu	missense_variant	0.26	pyrazinamide
clpC1	4039664	c.1041G>C	synonymous_variant	0.22	pyrazinamide
clpC1	4039669	p.Gln346Lys	missense_variant	0.28	pyrazinamide
clpC1	4039688	c.1017G>A	synonymous_variant	0.2	pyrazinamide	Not assoc w R - Interim
clpC1	4039691	p.Leu338Phe	missense_variant	0.17	pyrazinamide
clpC1	4039694	c.1011G>C	synonymous_variant	0.42	pyrazinamide
clpC1	4039697	c.1008C>G	synonymous_variant	0.2	pyrazinamide
clpC1	4039714	p.Tyr331His	missense_variant	0.26	pyrazinamide
clpC1	4039724	c.981A>G	synonymous_variant	0.46	pyrazinamide
clpC1	4039730	p.Leu325*	stop_gained	0.28	pyrazinamide
clpC1	4039733	c.972G>C	synonymous_variant	0.28	pyrazinamide
clpC1	4039739	c.966C>G	synonymous_variant	0.13	pyrazinamide
clpC1	4039742	c.963C>T	synonymous_variant	0.3	pyrazinamide
clpC1	4039748	c.957G>C	synonymous_variant	0.32	pyrazinamide
clpC1	4039751	c.954A>G	synonymous_variant	0.38	pyrazinamide
clpC1	4039757	c.948A>G	synonymous_variant	0.35	pyrazinamide
clpC1	4039769	c.936C>G	synonymous_variant	0.39	pyrazinamide
clpC1	4039773	p.Lys311Met	missense_variant	0.4	pyrazinamide
clpC1	4039787	c.918G>C	synonymous_variant	0.41	pyrazinamide
clpC1	4039793	c.912C>T	synonymous_variant	0.38	pyrazinamide
clpC1	4039802	c.903G>T	synonymous_variant	0.37	pyrazinamide
clpC1	4039811	c.894C>A	synonymous_variant	0.34	pyrazinamide
clpC1	4039817	c.888A>T	synonymous_variant	0.35	pyrazinamide
clpC1	4039820	c.885T>C	synonymous_variant	0.33	pyrazinamide	Not assoc w R - Interim
clpC1	4039829	c.874_876delTTGinsCTT	synonymous_variant	0.28	pyrazinamide
clpC1	4039838	p.Leu289Ile	missense_variant	0.27	pyrazinamide
clpC1	4039850	c.855T>C	synonymous_variant	0.24	pyrazinamide
clpC1	4039859	c.846C>T	synonymous_variant	0.21	pyrazinamide
clpC1	4039865	c.840T>C	synonymous_variant	0.25	pyrazinamide
clpC1	4039875	p.Asn277Arg	missense_variant	0.23	pyrazinamide
clpC1	4039877	c.828C>T	synonymous_variant	0.21	pyrazinamide
clpC1	4039883	c.822G>A	synonymous_variant	0.21	pyrazinamide
clpC1	4039910	c.795C>T	synonymous_variant	0.17	pyrazinamide
clpC1	4040015	c.690G>C	synonymous_variant	0.14	pyrazinamide
clpC1	4040021	c.684A>C	synonymous_variant	0.18	pyrazinamide	Not assoc w R - Interim
clpC1	4040024	c.681A>G	synonymous_variant	0.21	pyrazinamide
clpC1	4040033	c.672G>C	synonymous_variant	0.22	pyrazinamide
clpC1	4040045	c.660C>G	synonymous_variant	0.21	pyrazinamide	Not assoc w R - Interim
clpC1	4040051	c.654C>G	synonymous_variant	0.24	pyrazinamide
clpC1	4040057	c.648C>G	synonymous_variant	0.25	pyrazinamide
clpC1	4040063	c.642G>C	synonymous_variant	0.25	pyrazinamide	Not assoc w R - Interim
clpC1	4040066	c.639G>C	synonymous_variant	0.26	pyrazinamide
clpC1	4040069	c.636G>C	synonymous_variant	0.29	pyrazinamide
clpC1	4040090	c.615T>C	synonymous_variant	0.3	pyrazinamide	Not assoc w R - Interim
clpC1	4040096	c.609G>C	synonymous_variant	0.3	pyrazinamide
clpC1	4040110	c.595C>A	synonymous_variant	0.24	pyrazinamide
clpC1	4040114	p.Ile197Met	missense_variant	0.27	pyrazinamide
clpC1	4040117	c.588A>G	synonymous_variant	0.27	pyrazinamide
clpC1	4040125	p.Glu194Lys	missense_variant	0.25	pyrazinamide
clpC1	4040147	c.558A>G	synonymous_variant	0.13	pyrazinamide	Not assoc w R - Interim
embC	4242643	c.2781C>T	synonymous_variant	1.0	ethambutol	Not assoc w R
ubiA	4269131	p.Leu235Met	missense_variant	1.0	ethambutol	Uncertain significance
whiB6	4338595	c.-75delG	upstream_gene_variant	1.0	kanamycin	Not assoc w R
					capreomycin	Not assoc w R
					amikacin	Not assoc w R