EBG00000313325 - n.567A>G
Drug resistance types
18 Sensitive
24 RR-TB
1 HR-TB
19 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
64 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 30 |
| lineage4.8 | 37 |
| lineage3 | 3 |
| lineage2.2.1 | 17 |
| La1.2.BCG;lineage4.9 | 2 |
| lineage1.2.2.2 | 2 |
| lineage6.1.3 | 1 |
| lineage4.1.1.1 | 3 |
| lineage4.2.1 | 3 |
| La1.8.1 | 1 |
| lineage4.2.2 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage1.2.1.2 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage2.2.2 | 2 |
| lineage4.4.1.1.1 | 2 |
| lineage4.7 | 1 |
| lineage4.1.2 | 2 |
| lineage4.1.1.3.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.3.3 | 4 |
| lineage4.1.2.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage3.1.2.1 | 2 |
| lineage3.1.2 | 1 |
| lineage4.8.1 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.1.1.3 | 2 |
| lineage3;lineage4 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.8;lineage4.9 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 133 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR867571 | Other | lineage4.9 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR1238558 | Other | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR017781 | Other | lineage3 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | SRR5818388 | Other | lineage4.9 | None | ERR978694 | Other | lineage4.8 | None | ERR560442 | Sensitive | La1.2.BCG;lineage4.9 | None | ERR019855 | Other | lineage3 | None | SRR11342669 | Other | lineage4.8 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR3675552 | Other | lineage4.9 | None | ERR3806588 | Other | lineage6.1.3 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR5818449 | MDR-TB | lineage4.9 | None | ERR867573 | Other | lineage4.9 | None | ERR2228838 | Other | lineage4.8 | None | SRR7236134 | Other | La1.8.1 | None | DRR188816 | Other | lineage4.2.2 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR978735 | Other | lineage4.8 | None | ERR978762 | Other | lineage4.8 | None | ERR978748 | Other | lineage4.8 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR867572 | Other | lineage4.9 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR4815816 | Other | lineage4.5 | gb | SRR20969475 | Other | lineage1.2.1.2 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | SRR5818421 | Sensitive | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | ERR2228900 | Other | lineage4.8 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR3675491 | Other | lineage4.7 | None | ERR978752 | Other | lineage4.8 | None | ERR10796598 | Other | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR911929 | Other | lineage4.8 | None | ERR978734 | RR-TB | lineage4.8 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | SRR6045957 | Other | lineage4.9 | None | ERR560443 | Sensitive | La1.2.BCG;lineage4.9 | None | DRR034348 | Other | lineage2.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR5818397 | Other | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR7070369 | Other | lineage1.2.2.2 | None | SRR5818428 | Sensitive | lineage4.9 | None | ERR978755 | RR-TB | lineage4.8 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR7444074 | Sensitive | lineage4.9 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | ERR978756 | Other | lineage4.8 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR5818462 | Other | lineage4.9 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR978747 | Other | lineage4.8 | None | SRR1723567 | MDR-TB | lineage2.2.1 | cn | SRR5818419 | Sensitive | lineage4.9 | None | ERR867575 | Other | lineage4.9 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR023450 | RR-TB | lineage2.2.1 | None | SRR5818413 | Sensitive | lineage4.9 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR978751 | Other | lineage4.8 | None | SRR5818411 | RR-TB | lineage4.9 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR18913750 | Other | lineage2.2.1 | None | SRR7504773 | Sensitive | lineage4.9 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | SRR7504779 | Sensitive | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR978761 | Other | lineage4.8 | None | ERR2027250 | Other | lineage3.1.2 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR10395964 | MDR-TB | lineage2.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | SRR5818429 | Sensitive | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796599 | Other | lineage4.8 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SAMEA3501015 | Other | lineage4.8 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR10796571 | Other | lineage4.9 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR978727 | Other | lineage4.8 | None | SRR5818426 | Other | lineage4.9 | None | ERR911930 | Other | lineage4.8 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818460 | Other | lineage4.9 | None | ERR4816417 | Other | lineage4.9 | None | ERR2228890 | Other | lineage4.8;lineage4.9 | None | ERR10796577 | Other | lineage4.9 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | ERR10796597 | Other | lineage4.3.3 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None |
|---|
