EBG00000313325 - n.567A>G
Drug resistance types
30 Sensitive
47 RR-TB
5 HR-TB
17 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
135 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 23 |
| lineage4.3.2 | 1 |
| lineage4 | 14 |
| lineage4.9 | 54 |
| lineage4.3.3 | 6 |
| lineage4.3.4.1 | 1 |
| lineage6 | 2 |
| lineage4.1.1 | 4 |
| lineage4.4.1.1 | 7 |
| lineage3 | 22 |
| lineage4.6 | 1 |
| lineage4.8 | 19 |
| lineage1.2.2.2 | 4 |
| lineage4.6.1.2 | 2 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.5 | 2 |
| lineage2.2.2 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.1.1.3 | 2 |
| lineage1.2.1.2 | 1 |
| lineage4.1.2.1 | 10 |
| lineage1.2.1.2.1 | 2 |
| lineage1.1.2 | 5 |
| lineage1.2.1.1 | 2 |
| lineage1.2.2 | 1 |
| lineage4.1 | 1 |
| lineage4.3.4.2 | 3 |
| lineage5 | 2 |
| lineage4.3.4.2.1 | 3 |
| lineage4.7 | 2 |
| lineage4.9;lineage3.1.1 | 1 |
| 9 | |
| lineage3.1.2 | 2 |
| lineage3.1 | 1 |
| lineage3.1.2.1 | 2 |
| lineage1 | 2 |
| lineage1.1.1 | 1 |
| lineage6.3.1 | 1 |
| lineage4.1.1.3.1 | 4 |
| lineage4.6.2.2 | 3 |
| lineage1.1.3.1 | 1 |
| lineage3.1.1 | 4 |
| lineage4.3.1.1 | 3 |
| La1.6 | 1 |
| lineage4.2.1 | 2 |
| lineage3.1.2.2 | 2 |
| lineage4.3.1 | 1 |
| lineage4.6.5 | 1 |
| lineage2.2.1;lineage1.1.1 | 1 |
| lineage4.2.2 | 1 |
| lineage4.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 244 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR10395964 | MDR-TB | lineage2.2.1 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796558 | Sensitive | lineage4 | None | ERR10796559 | Other | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796595 | Other | lineage4.9 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796599 | Other | lineage4 | None | ERR10796597 | Other | lineage4 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796611 | Other | lineage4.9 | None | ERR3806588 | Other | lineage6 | None | ERR10796635 | Other | lineage4 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796627 | Other | lineage4 | None | ERR10796634 | Other | lineage4 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4178161 | Other | lineage4.4.1.1 | None | ERR6865446 | Other | lineage4.4.1.1 | None | ERR773806 | Sensitive | lineage2.2.1 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR9117759 | Other | lineage3 | None | ERR9117704 | Other | lineage4.6 | None | ERR9117806 | Other | lineage4.8 | None | ERR9117788 | Other | lineage3 | None | SRR023487 | RR-TB | lineage2.2.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR023450 | RR-TB | lineage2.2.1 | None | ERR987757 | MDR-TB | lineage4.6.1.2 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR1173833 | Other | lineage4.9 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR12199400 | HR-TB | lineage4.9;lineage1.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180252 | Other | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR16370694 | Sensitive | lineage4.1.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR18213726 | Other | lineage3 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18913750 | Other | lineage2.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR19304094 | Other | lineage6 | None | SRR19233762 | Sensitive | lineage4.1.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR21595825 | Other | lineage1.2.1.2.1 | None | SRR22424743 | Pre-XDR-TB | lineage1.1.2 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4814312 | Other | lineage4 | None | SRR3105736 | Other | lineage1.2.2.2 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4814775 | Other | lineage1.1.2 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4814986 | Other | lineage4.3.4.2 | None | SRR1723567 | MDR-TB | lineage2.2.1 | cn | SAMEA3501015 | Other | lineage4.8 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4815298 | Other | lineage4.3.4.2.1 | None | SRR3675491 | Other | lineage4.7 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR4815517 | Other | lineage1.2.2.2 | None | SRR5818419 | Sensitive | None | SRR3675509 | Other | lineage4.9 | None | ERR2027250 | Other | lineage3.1.2 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4817070 | Other | lineage1.1.2 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816417 | Other | lineage4.9 | None | ERR2229204 | Other | lineage4.8 | None | ERR4816476 | Other | lineage3.1.2.1 | None | SRR5818426 | Other | None | ERR4816756 | RR-TB | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817301 | Other | lineage4.9 | None | ERR2228815 | RR-TB | lineage4.8 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2229505 | Other | lineage4.8 | None | ERR2228890 | Other | lineage4 | None | ERR4818988 | Other | lineage1 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR2229810 | Other | lineage4.8 | None | ERR4817703 | Other | lineage1.1.1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | SAMEA3450033 | Other | lineage4.8 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4817555 | RR-TB | lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4819140 | Other | lineage4.1.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4818977 | RR-TB | lineage4.1.2.1 | None | SRR5074711 | Sensitive | lineage4.3.3 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4819528 | RR-TB | lineage3 | None | ERR2513681 | Other | lineage1.1.2 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR5818458 | Other | None | ERR4819456 | Other | lineage4.8 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR2514073 | Other | lineage4.1.1.3.1 | None | ERR4820324 | Other | lineage4 | None | ERR4819423 | Other | lineage4.6.2.2 | None | ERR4819491 | Other | lineage4.1.2.1 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4819784 | Other | lineage4.1.2.1 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4820107 | RR-TB | None | ERR4820959 | Other | lineage4.1.2.1 | None | SRR6045422 | Other | lineage4.3.1.1 | None | ERR4821054 | Other | lineage3 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR6045485 | Other | lineage4.9 | None | ERR4821773 | Other | La1.6 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821214 | RR-TB | None | ERR4821310 | Other | lineage5 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4821981 | Other | lineage4.1.2.1 | None | SRR6045683 | Other | lineage3.1.2 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045642 | Other | lineage3.1.2.2 | None | SRR5818429 | Sensitive | lineage4.9 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818411 | MDR-TB | lineage4.9 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818402 | Other | lineage4.9 | None | SRR5818404 | Other | lineage4.9 | None | SRR5818410 | Sensitive | lineage4.9 | None | SRR5818413 | HR-TB | lineage4.9 | None | SRR5818430 | Sensitive | lineage4.9 | None | SRR5818421 | Sensitive | lineage4.9 | None | SRR5818437 | MDR-TB | lineage4.9 | None | SRR6045805 | Other | lineage4.3.1.1 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR5818462 | Other | lineage4.9 | None | SRR5818460 | Other | lineage4.9 | None | SRR6044904 | Other | lineage3 | None | SRR6045928 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6044936 | Other | lineage4 | None | SRR6045957 | Other | lineage4.9 | None | SRR6046020 | Other | lineage3 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6046246 | Other | lineage3 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046208 | Other | lineage4 | None | SRR6045222 | Other | lineage4.1.2.1 | None | SRR6045289 | Other | None | SRR6046291 | Other | lineage3 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046359 | Other | lineage4.7 | None | ERR2851359 | Other | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | SRR6046534 | Other | lineage1.1.2 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR6046729 | Other | None | SRR6046607 | Other | lineage3 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046860 | Other | lineage4.4.1.1 | None | SRR6046815 | Other | lineage3 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6982078 | Sensitive | None | ERR2843513 | Other | lineage2.2.1;lineage1.1.1 | None | ERR502472 | Other | lineage4.6.2.2 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | ERR502482 | Sensitive | lineage4.9 | None | ERR502483 | Sensitive | lineage4.9 | None | ERR502484 | Sensitive | lineage4.9 | None | SRR6982430 | Other | lineage4.3.4.2.1 | None | ERR502485 | Sensitive | lineage4.9 | None | ERR502486 | Sensitive | lineage4.9 | None | ERR502493 | Sensitive | lineage4.9 | None | ERR502489 | Sensitive | lineage4.9 | None | ERR502498 | Sensitive | lineage4.9 | None | SRR6832644 | Other | lineage4.3.3 | None | ERR4815816 | Other | lineage4.5 | gb | DRR188816 | Sensitive | lineage4.2.2 | None | SRR6982558 | Other | lineage4.3.4.2 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR323035 | Sensitive | lineage4.9 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | DRR034348 | Other | lineage2.2.1 | None | ERR019855 | Other | lineage3 | None | ERR017781 | Other | lineage3 | None | ERR037234 | Sensitive | lineage4.9 | None |
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