EBG00000313339 - n.1881T>A


Drug resistance types
50 Sensitive 37 RR-TB 33 HR-TB 40 MDR-TB 20 Pre-XDR-TB 0 XDR-TB 90 Other
lineage Counts
lineage Count
lineage4 24
lineage2.2.1 26
lineage4.9 97
lineage1.2.2.2 1
lineage4.1.2.1 6
lineage4.9.1 1
lineage4.3.4.2.1 10
lineage5.1.1 2
lineage4.1.1.3 3
lineage2.2.1.1 1
lineage6 1
lineage2.2.2 1
lineage4.8 9
lineage4.7 2
lineage4.8;lineage4.3.3 4
lineage4.6.1.2 6
lineage4.4.1.1;lineage4.1.2.1 1
La1.6 1
lineage4.2.2.2 1
lineage4.3.2.1 2
lineage4.4.1.1.1 2
lineage3 14
8
La1.8.1 4
lineage4.9;lineage2.2 1
lineage2.2 3
lineage2 1
lineage3.1.3 1
lineage4.4.2 1
lineage4.6.2.2 1
lineage4.9;lineage3.1.1 1
lineage4.4.1.1 3
lineage1.2.1.1 1
lineage3.1 1
lineage4;lineage2 1
lineage4.5 1
lineage4.3.4.2 1
lineage4.3.3 4
lineage1.1.1 1
lineage3.1.2 1
lineage3.1.1 1
lineage3.1.2.2 1
lineage4.6.5 1
lineage4.6.1.1 1
lineage4.8.1 1
La1.2 1
lineage4.9;lineage1.1 1
lineage4.6 1
lineage4.3.4.1 1
La1.7.X-unk4 1
lineage4.4.1.2 1
La1.3 6
lineage4.9;La1.3 3
spoligotype Counts
spoligotype Count
None 270
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR6359066 HR-TB lineage4 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR6197038 HR-TB lineage4.9 None
ERR6358951 HR-TB lineage4 None
ERR9117827 Other lineage1.2.2.2 None
ERR6359070 Other lineage4.9 None
ERR6359069 Other lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR736831 HR-TB lineage4.9 None
ERR037504 Other lineage4.9.1 None
ERR212114 Other lineage4.3.4.2.1 None
ERR6359074 HR-TB lineage4.9 None
ERR736837 Other lineage4.9 None
ERR751345 Other lineage5.1.1 None
ERR970449 RR-TB lineage4.1.1.3 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR983238 MDR-TB lineage2.2.1.1 None
ERR9787336 Other lineage6 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
ERR9992784 Pre-XDR-TB lineage2.2.2 None
SRR10315751 MDR-TB lineage4.8 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
ERR987707 MDR-TB lineage4.7 None
SRR10315551 Sensitive lineage2.2.1 None
SRR10315567 Other lineage2.2.1 None
SRR1049676 MDR-TB lineage4.8;lineage4.3.3 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1049581 MDR-TB lineage4.6.1.2 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1049677 MDR-TB lineage4.8;lineage4.3.3 None
SRR1062920 MDR-TB lineage4.8;lineage4.3.3 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1062919 HR-TB lineage2.2.1 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1140574 MDR-TB lineage4.8;lineage4.3.3 None
SRR1062928 RR-TB lineage4 None
SRR10993951 RR-TB La1.6 None
SRR11342688 Other lineage4.2.2.2 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1140716 Pre-XDR-TB lineage3 None
SRR1140724 HR-TB lineage2.2.1 None
SRR1140736 RR-TB None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR11462861 Other La1.8.1 None
SRR1175472 MDR-TB lineage4 None
SRR1172807 Sensitive lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR1173170 Other lineage4.9 None
SRR1173185 HR-TB lineage4.9 None
SRR1173740 Other None
SRR1173770 Other lineage4.9 None
SRR1175473 Other lineage4.9 None
SRR1172717 Other lineage4.9 None
SRR1173281 RR-TB lineage3 None
SRR1173450 RR-TB lineage4.9 None
SRR1173687 Pre-XDR-TB lineage2.2.1 None
SRR1175052 HR-TB lineage4.9 None
SRR1175474 HR-TB lineage4.9 None
SRR1175500 MDR-TB lineage4 None
SRR1175491 MDR-TB lineage4 None
SRR1175487 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180406 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1180413 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180440 Other lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181402 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1181351 Sensitive lineage4.9 None
SRR1181368 Other lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR1184329 MDR-TB lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR1196478 MDR-TB lineage4.9 None
SRR13180363 Sensitive lineage4.1.2.1 None
SRR16156804 RR-TB lineage4.9 None
SRR18913742 Sensitive lineage3.1.3 None
SRR16157123 Other lineage4.9 None
SRR18003036 Other lineage2.2.1 None
SRR16156832 RR-TB None
SRR19303907 Other lineage4.8 None
SRR19303817 Other lineage2.2.1 None
SRR19303820 RR-TB lineage4.8 None
SRR21677886 Sensitive lineage4.9 None
SRR20632814 Sensitive lineage4 None
SRR20969542 Other lineage4.4.2 None
SRR21727760 Other lineage2.2.1 None
SRR22424787 Sensitive lineage4.9 None
ERR4815121 HR-TB lineage4.6.2.2 None
ERR4815310 Other None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR3601585 Pre-XDR-TB lineage2.2 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR3619764 Pre-XDR-TB lineage2.2 None
ERR4814639 HR-TB lineage4 None
ERR171142 Other lineage4.9;lineage3.1.1 None
ERR4815471 Other lineage4.9 None
ERR4815550 Other lineage4 None
SRR3675265 Other lineage4 None
ERR1750889 Other lineage4.4.1.1 None
ERR176580 Sensitive lineage4.3.4.2.1 None
ERR4816470 Other lineage3 None
ERR4814976 Other lineage4.9 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR2027290 RR-TB lineage3.1 None
ERR4816322 Other lineage4.9 None
ERR4817109 Other lineage3 None
ERR4816762 Other lineage4;lineage2 None
ERR2229197 Sensitive lineage4 None
ERR2229198 MDR-TB lineage4.8 None
ERR4816548 MDR-TB lineage4.5 None
ERR216965 HR-TB lineage4.9 None
ERR4817204 RR-TB lineage4.9 None
ERR4816852 Other lineage4.9 None
ERR4817434 Other lineage3 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR228175 Sensitive lineage3 None
ERR4815815 Sensitive lineage4 None
ERR4817667 HR-TB lineage4.8 None
SAMN02380982 MDR-TB lineage4.3.4.2 None
SRR5153091 HR-TB lineage4.3.3 None
ERR4818561 HR-TB lineage4 None
ERR4818624 Other lineage4.3.4.2.1 None
SRR5341365 Pre-XDR-TB lineage3 None
SRR2100532 Sensitive lineage3 None
ERR228180 Sensitive lineage3 None
ERR4817915 RR-TB lineage4.9 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4818904 Other lineage4.8 None
ERR4818536 Other lineage4.9 None
SRR5007204 Other lineage4.1.2.1 None
ERR4819383 RR-TB lineage4.9 None
ERR4819314 Other lineage1.1.1 None
ERR4820723 RR-TB lineage4.4.1.1 None
ERR4820290 Other lineage3 None
ERR4819357 Other lineage4.9 None
ERR4819546 HR-TB lineage3 None
ERR4819462 Other lineage4 None
SRR5341267 Pre-XDR-TB lineage3 None
SRR6045832 HR-TB lineage4.9 None
ERR4820817 Other lineage4.1.2.1 None
ERR4820030 Other lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR4819876 HR-TB lineage4.3.4.2.1 None
ERR4819910 Other lineage4.9 None
SRR6045464 Other lineage4.1.1.3 None
ERR4821172 RR-TB lineage4.9 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR6045957 Other lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR6045053 Other None
SRR6046177 Other lineage3.1.2 None
SRR6046442 Other lineage3 None
SRR6046385 Other lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
SRR6046275 Other lineage3.1.1 None
ERR2851356 Sensitive lineage4.9 None
SRR6046440 Other lineage3.1.2.2 None
SRR6046497 Other lineage4.9 None
ERR323037 HR-TB lineage4 None
SRR6046848 Other lineage4.6.5 None
ERR502470 RR-TB lineage4.9 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR502479 RR-TB lineage4.9 None
ERR502481 Pre-XDR-TB lineage4.9 None
ERR5311077 RR-TB La1.8.1 None
ERR4815783 Other lineage4.1.2.1 gb
ERR502517 MDR-TB lineage5.1.1 None
SRR6982141 RR-TB lineage4.3.3 None
SRR7131123 Other lineage4.8 None
SRR7131149 Pre-XDR-TB lineage4.8 None
SRR7131121 Other lineage4.3.3 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9971270 RR-TB lineage2.2.1 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR7496471 Sensitive None
SRR7496523 Other lineage4.7 None
SRR7585400 MDR-TB lineage3 None
SRR9971114 Other lineage2.2.1 None
SRR9971065 RR-TB lineage2.2.1 None
SRR9971080 RR-TB lineage2.2.1 None
SRR9971112 Other lineage2.2.1 None
SRR9971122 MDR-TB lineage4.8 None
SRR9971113 Other lineage2.2.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
ERR323048 Pre-XDR-TB lineage4.9 None
ERR037234 Sensitive lineage4.9 None
ERR036207 Other lineage4.9 None
SRR7851312 Other La1.2 None
ERR10796571 Other lineage4.9 None
ERR067712 HR-TB lineage4 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR1063855 Other lineage4 None
ERR10796553 Other lineage4.9;lineage1.1 None
ERR10796591 MDR-TB lineage4.9 None
ERR10796580 RR-TB lineage4.6 None
ERR10796589 Other lineage4.9 None
ERR10796618 Other lineage4.3.4.1 None
ERR10796593 RR-TB lineage4 None
ERR10796597 Other lineage4 None
ERR10796598 RR-TB lineage4.9 None
ERR10796632 Other lineage4.3.3 None
ERR10796629 Other lineage4 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR3445487 Other La1.7.X-unk4 None
ERR3283013 MDR-TB lineage4 None
ERR1194808 HR-TB lineage2.2.1 None
ERR126597 MDR-TB lineage4.4.1.2 None
ERR3439441 Other La1.8.1 None
ERR3797062 RR-TB lineage4.9 None
ERR3468488 RR-TB La1.8.1 None
ERR386875 MDR-TB lineage4.6.1.2 None
ERR473323 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4 None
ERR473303 Sensitive lineage4.9 None
ERR473367 Sensitive lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR4769442 HR-TB lineage4 None
ERR4769408 Other La1.3 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769436 Other La1.3 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769446 Sensitive lineage4.9;La1.3 None
ERR4769444 HR-TB lineage4.9 None
ERR4769516 Other La1.3 None
ERR4769508 RR-TB lineage4.9 None
ERR4769514 Other La1.3 None
ERR4769518 Sensitive lineage4.9 None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR4769550 Other lineage4.9;La1.3 None
ERR4769552 Other La1.3 None
ERR4769555 Other La1.3 None
ERR4769530 RR-TB lineage4.9 None
ERR4796577 MDR-TB None
ERR4798823 HR-TB lineage4 None
ERR4808964 RR-TB lineage2.2.1 None
ERR4800197 HR-TB None
ERR5917972 MDR-TB lineage4.4.1.1 za