TB-Profiler

Lineage	Family	RDs	Frequency
lineage4	Euro-American	None	1.0
lineage4.9	Euro-American (H37Rv-like)	None	1.0

Gene	Chromosome position	Mutation	Type	Estimated fraction	Drugs	Confidence	Comment
rrs	1472644	n.799C>T	non_coding_transcript_exon_variant	0.99	streptomycin	Uncertain significance	Mutation from literature

Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance

Gene	Chromosome position	Mutation	Type	Estimated fraction	Drugs	Confidence
rpoB	762850	p.Tyr1015Phe	missense_variant	0.9	rifampicin
rpoC	762857	c.-513C>T	upstream_gene_variant	0.9	rifampicin
rpoB	762858	p.Thr1018Ser	missense_variant	0.9	rifampicin
rpoC	762863	c.-507T>G	upstream_gene_variant	0.91	rifampicin
rpoB	762878	p.Ile1024Met	missense_variant	0.92	rifampicin
rpoB	762879	p.Met1025Leu	missense_variant	0.92	rifampicin	Uncertain significance
rpoB	762899	c.3093G>C	synonymous_variant	0.93	rifampicin	Not assoc w R - Interim
rpoB	762905	p.Asp1033Glu	missense_variant	0.94	rifampicin
rpoC	762911	c.-459C>T	upstream_gene_variant	0.94	rifampicin
rpoC	762917	c.-453C>T	upstream_gene_variant	0.94	rifampicin
rpoB	762920	c.3114C>T	synonymous_variant	0.94	rifampicin	Not assoc w R - Interim
rpoB	762929	c.3123G>T	synonymous_variant	0.94	rifampicin	Not assoc w R - Interim
rpoB	762962	c.3156C>T	synonymous_variant	0.93	rifampicin	Not assoc w R - Interim
rpoC	762971	c.-399G>C	upstream_gene_variant	0.93	rifampicin
rpoC	762983	c.-387C>T	upstream_gene_variant	0.93	rifampicin
rpoC	762989	c.-381G>C	upstream_gene_variant	0.93	rifampicin
rpoB	762995	c.3189G>T	synonymous_variant	0.93	rifampicin	Not assoc w R - Interim
rpoB	763005	p.Cys1067Val	missense_variant	0.93	rifampicin
rpoC	763013	c.-357C>A	upstream_gene_variant	0.94	rifampicin
rpoC	763022	c.-348C>A	upstream_gene_variant	0.95	rifampicin
rpoB	763028	c.3222T>C	synonymous_variant	0.95	rifampicin	Not assoc w R - Interim
rpoC	763053	c.-317_-315delTTGinsCTC	upstream_gene_variant	0.94	rifampicin
rpoB	763058	c.3252C>T	synonymous_variant	1.0	rifampicin	Not assoc w R - Interim
rpoB	763074	p.Thr1090Val	missense_variant	1.0	rifampicin
rpoC	763079	c.-291C>T	upstream_gene_variant	1.0	rifampicin
rpoB	763082	c.3276C>T	synonymous_variant	1.0	rifampicin	Not assoc w R - Interim
rpoB	763094	c.3288G>C	synonymous_variant	1.0	rifampicin	Not assoc w R - Interim
rpoC	763103	c.-267G>A	upstream_gene_variant	1.0	rifampicin
rpoC	763109	c.-261C>G	upstream_gene_variant	1.0	rifampicin
rplC	800639	c.-170C>T	upstream_gene_variant	1.0	linezolid
rplC	800645	c.-164C>T	upstream_gene_variant	1.0	linezolid
rplC	800648	c.-161A>G	upstream_gene_variant	1.0	linezolid
rplC	800654	c.-155T>C	upstream_gene_variant	1.0	linezolid
rplC	800672	c.-137G>C	upstream_gene_variant	1.0	linezolid
rplC	800693	c.-116A>T	upstream_gene_variant	1.0	linezolid
rplC	800702	c.-107G>T	upstream_gene_variant	1.0	linezolid
rplC	800703	c.-106T>C	upstream_gene_variant	1.0	linezolid
rplC	800714	c.-95C>T	upstream_gene_variant	1.0	linezolid
rplC	800715	c.-94A>C	upstream_gene_variant	1.0	linezolid
rplC	800723	c.-86C>A	upstream_gene_variant	1.0	linezolid
rrs	1471918	n.73A>T	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1471922	n.78delT	non_coding_transcript_exon_variant	1.0	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1471927	n.82_85delTTCGinsCAGCTTGCT	non_coding_transcript_exon_variant	1.0	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1471932	n.87A>G	non_coding_transcript_exon_variant	1.0	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1471934	n.89A>G	non_coding_transcript_exon_variant	1.0	kanamycin
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1471938	n.93T>A	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1471972	n.127T>C	non_coding_transcript_exon_variant	1.0	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472075	n.230A>G	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin
					amikacin	Uncertain significance
rrs	1472106	n.261G>A	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472108	n.263C>T	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472123	n.278A>G	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin
					amikacin	Uncertain significance
rrs	1472150	n.305T>G	non_coding_transcript_exon_variant	1.0	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472151	n.306C>A	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472160	n.315C>T	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472172	n.327T>C	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Not assoc w R
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472225	n.380C>G	non_coding_transcript_exon_variant	1.0	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472278	n.433C>T	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin
					amikacin	Uncertain significance
rrs	1472279	n.434T>C	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin
					amikacin	Uncertain significance
rrs	1472297	n.454_457delTCCG	non_coding_transcript_exon_variant	1.0	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472304	n.459G>T	non_coding_transcript_exon_variant	1.0	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472307	n.464_471delCTCGGATT	non_coding_transcript_exon_variant	1.0	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472325	n.480G>A	non_coding_transcript_exon_variant	1.0	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472344	n.499C>T	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Not assoc w R
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472435	n.590T>C	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472471	n.626G>A	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472485	n.640delGinsTA	non_coding_transcript_exon_variant	1.0	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472489	n.644A>T	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472498	n.653C>T	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472530	n.685G>A	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472607	n.762G>A	non_coding_transcript_exon_variant	0.99	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472660	n.815T>C	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472661	n.816A>G	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472682	n.837T>A	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472683	n.838T>C	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472713	n.868T>C	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472714	n.869A>G	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472828	n.983T>C	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Not assoc w R
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472874	n.1029C>T	non_coding_transcript_exon_variant	1.0	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472878	n.1033G>A	non_coding_transcript_exon_variant	1.0	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472880	n.1035G>A	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472895	n.1050C>T	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1472957	n.1112C>T	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472973	n.1128A>T	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin
					amikacin	Uncertain significance
rrs	1472974	n.1129A>G	non_coding_transcript_exon_variant	1.0	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1472989	n.1144G>A	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1472993	n.1148G>A	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1473005	n.1160C>T	non_coding_transcript_exon_variant	1.0	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1473035	n.1190G>A	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Not assoc w R
rrs	1473080	n.1235C>T	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1473287	n.1442C>A	non_coding_transcript_exon_variant	1.0	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1473289	n.1444_1445delTCinsATTTT	non_coding_transcript_exon_variant	1.0	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1473292	n.1447G>T	non_coding_transcript_exon_variant	1.0	kanamycin
					capreomycin
					streptomycin
					amikacin
rrs	1473294	n.1449A>G	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrs	1473316	n.1471C>T	non_coding_transcript_exon_variant	1.0	kanamycin	Uncertain significance
					capreomycin	Uncertain significance
					streptomycin	Uncertain significance
					amikacin	Uncertain significance
rrl	1473697	n.40C>A	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1473697	n.40C>A	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1473699	n.42A>T	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1473699	n.42A>T	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1473700	n.43G>A	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1473700	n.43G>A	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1473701	n.44A>G	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1473701	n.44A>G	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1473718	n.61G>A	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1473718	n.61G>A	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1473731	n.74T>G	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1473731	n.74T>G	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1473746	n.89T>C	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1473746	n.89T>C	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1473751	n.94C>T	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1473751	n.94C>T	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1473758	n.101G>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1473758	n.101G>T	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1473768	n.111A>G	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1473768	n.111A>G	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1474130	n.473C>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1474130	n.473C>T	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1474140	n.483C>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1474140	n.483C>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1474151	n.494C>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1474151	n.494C>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1474178	n.522dupC	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1474178	n.522dupC	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1474181	n.524C>G	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1474181	n.524C>G	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1474184	n.527_528delCGinsT	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1474184	n.527_528delCGinsT	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1474249	n.592G>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1474249	n.592G>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1474263	n.606G>A	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1474263	n.606G>A	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1474269	n.612C>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1474269	n.612C>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1474287	n.630T>C	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1474287	n.630T>C	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1474288	n.631C>T	non_coding_transcript_exon_variant	0.92	capreomycin
rrl	1474288	n.631C>T	non_coding_transcript_exon_variant	0.92	linezolid
rrl	1474289	n.632C>T	non_coding_transcript_exon_variant	0.92	capreomycin
rrl	1474289	n.632C>T	non_coding_transcript_exon_variant	0.92	linezolid
rrl	1474293	n.637_649delCCTCTCCGGAGGA	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1474293	n.637_649delCCTCTCCGGAGGA	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1474308	n.651G>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1474308	n.651G>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1474310	n.653T>G	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1474310	n.653T>G	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1474451	n.794T>C	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1474451	n.794T>C	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1474467	n.810A>G	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1474467	n.810A>G	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1474487	n.830G>T	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1474487	n.830G>T	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1474495	n.838G>A	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1474495	n.838G>A	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1474496	n.839C>G	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1474496	n.839C>G	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1474497	n.840G>A	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1474497	n.840G>A	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1474506	n.849C>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1474506	n.849C>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1474507	n.850G>C	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1474507	n.850G>C	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1474508	n.851C>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1474508	n.851C>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1474517	n.860C>G	non_coding_transcript_exon_variant	0.98	capreomycin
rrl	1474517	n.860C>G	non_coding_transcript_exon_variant	0.98	linezolid
rrl	1474537	n.880G>A	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1474537	n.880G>A	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1474552	n.895C>T	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1474552	n.895C>T	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1474734	n.1077G>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1474734	n.1077G>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1474749	n.1092C>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1474749	n.1092C>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1474753	n.1097delC	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1474753	n.1097delC	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1474760	n.1103A>G	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1474760	n.1103A>G	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1474794	n.1137C>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1474794	n.1137C>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1474798	n.1141C>G	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1474798	n.1141C>G	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1474812	n.1155G>A	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1474812	n.1155G>A	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1474823	n.1166C>G	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1474823	n.1166C>G	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1474824	n.1167A>G	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1474824	n.1167A>G	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1474825	n.1168G>A	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1474825	n.1168G>A	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1474830	n.1173A>G	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1474830	n.1173A>G	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1474864	n.1207C>T	non_coding_transcript_exon_variant	1.0	capreomycin	Not assoc w R
rrl	1474864	n.1207C>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1474896	n.1239A>G	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1474896	n.1239A>G	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1474901	n.1244A>G	non_coding_transcript_exon_variant	0.95	capreomycin
rrl	1474901	n.1244A>G	non_coding_transcript_exon_variant	0.95	linezolid
rrl	1474904	n.1247G>C	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1474904	n.1247G>C	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1474913	n.1256T>C	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1474913	n.1256T>C	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1474921	n.1264C>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1474921	n.1264C>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1474932	n.1275C>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1474932	n.1275C>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1475090	n.1433A>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1475090	n.1433A>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1475094	n.1437C>T	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1475094	n.1437C>T	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1475113	n.1456C>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1475113	n.1456C>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1475114	n.1457C>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1475114	n.1457C>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1475116	n.1459G>A	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1475116	n.1459G>A	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1475120	n.1463G>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1475120	n.1463G>T	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1475171	n.1514C>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1475171	n.1514C>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1475499	n.1842C>G	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1475499	n.1842C>G	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1475514	n.1857G>A	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1475514	n.1857G>A	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1475526	n.1869C>A	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1475526	n.1869C>A	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1475531	n.1874C>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1475531	n.1874C>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1475538	n.1881T>A	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1475538	n.1881T>A	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1475539	n.1882A>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1475539	n.1882A>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1475542	n.1885A>G	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1475542	n.1885A>G	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1475545	n.1888T>G	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1475545	n.1888T>G	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1475550	n.1893A>G	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1475550	n.1893A>G	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1475696	n.2039T>A	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1475696	n.2039T>A	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1475699	n.2042delCinsGGT	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1475699	n.2042delCinsGGT	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1475703	n.2046A>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1475703	n.2046A>T	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1475753	n.2096C>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1475753	n.2096C>T	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1475757	n.2100_2101insG	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1475757	n.2100_2101insG	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1475762	n.2105_2108delGCAAinsCTTTTGC	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1475762	n.2105_2108delGCAAinsCTTTTGC	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1475769	n.2112_2113insC	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1475769	n.2112_2113insC	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1475881	n.2224T>C	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1475881	n.2224T>C	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1475883	n.2226A>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1475883	n.2226A>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1475884	n.2227A>G	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1475884	n.2227A>G	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1475897	n.2240T>C	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1475897	n.2240T>C	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1475902	n.2245T>C	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1475902	n.2245T>C	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1475916	n.2259C>G	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1475916	n.2259C>G	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1475975	n.2318C>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1475975	n.2318C>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1475977	n.2320A>G	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1475977	n.2320A>G	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1475988	n.2331A>G	non_coding_transcript_exon_variant	1.0	capreomycin	Not assoc w R
rrl	1475988	n.2331A>G	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1475997	n.2340A>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1475997	n.2340A>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476029	n.2372A>T	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1476029	n.2372A>T	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1476030	n.2373A>G	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476030	n.2373A>G	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1476035	n.2378G>A	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1476035	n.2378G>A	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1476049	n.2392C>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476049	n.2392C>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476086	n.2429G>A	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476086	n.2429G>A	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476091	n.2434_2435insC	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1476091	n.2434_2435insC	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1476099	n.2442A>G	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476099	n.2442A>G	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476100	n.2443A>C	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1476100	n.2443A>C	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1476103	n.2446C>G	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476103	n.2446C>G	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1476105	n.2450delA	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1476105	n.2450delA	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1476110	n.2453G>C	non_coding_transcript_exon_variant	0.96	capreomycin	Uncertain significance
rrl	1476110	n.2453G>C	non_coding_transcript_exon_variant	0.96	linezolid
rrl	1476113	n.2456T>G	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1476113	n.2456T>G	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1476131	n.2474C>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476131	n.2474C>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476160	n.2503T>C	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476160	n.2503T>C	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476164	n.2507A>G	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476164	n.2507A>G	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476165	n.2508T>A	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476165	n.2508T>A	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476194	n.2537A>G	non_coding_transcript_exon_variant	1.0	capreomycin	Not assoc w R
rrl	1476194	n.2537A>G	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476200	n.2543A>T	non_coding_transcript_exon_variant	1.0	capreomycin	Not assoc w R
rrl	1476200	n.2543A>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476201	n.2544C>T	non_coding_transcript_exon_variant	1.0	capreomycin	Not assoc w R
rrl	1476201	n.2544C>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476214	n.2557G>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476214	n.2557G>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476215	n.2558C>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476215	n.2558C>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476224	n.2567A>G	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476224	n.2567A>G	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476245	n.2588C>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476245	n.2588C>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476252	n.2595T>G	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476252	n.2595T>G	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476256	n.2599A>G	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476256	n.2599A>G	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476260	n.2603A>G	non_coding_transcript_exon_variant	1.0	capreomycin	Not assoc w R
rrl	1476260	n.2603A>G	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476267	n.2610G>T	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1476267	n.2610G>T	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1476269	n.2612C>G	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1476269	n.2612C>G	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1476274	n.2617G>C	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1476274	n.2617G>C	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1476276	n.2619C>A	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1476276	n.2619C>A	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1476281	n.2624T>C	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476281	n.2624T>C	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476297	n.2640C>G	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476297	n.2640C>G	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476298	n.2641C>G	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476298	n.2641C>G	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476300	n.2643G>T	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1476300	n.2643G>T	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1476301	n.2644A>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476301	n.2644A>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476309	n.2652G>C	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476309	n.2652G>C	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476428	n.2771C>T	non_coding_transcript_exon_variant	1.0	capreomycin	Not assoc w R
rrl	1476428	n.2771C>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476523	n.2867delC	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1476523	n.2867delC	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1476539	n.2882A>G	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476539	n.2882A>G	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476540	n.2883C>G	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476540	n.2883C>G	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476567	n.2910C>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476567	n.2910C>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476573	n.2916A>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476573	n.2916A>T	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1476584	n.2927C>T	non_coding_transcript_exon_variant	1.0	capreomycin	Not assoc w R
rrl	1476584	n.2927C>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476585	n.2928A>G	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476585	n.2928A>G	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476600	n.2943A>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476600	n.2943A>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476607	n.2950C>T	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476607	n.2950C>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476608	n.2951C>G	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476608	n.2951C>G	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476614	n.2957A>T	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1476614	n.2957A>T	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1476616	n.2959A>G	non_coding_transcript_exon_variant	1.0	capreomycin
rrl	1476616	n.2959A>G	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1476619	n.2962C>T	non_coding_transcript_exon_variant	1.0	capreomycin	Not assoc w R
rrl	1476619	n.2962C>T	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476624	n.2967T>A	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476624	n.2967T>A	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476628	n.2971T>A	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476628	n.2971T>A	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rrl	1476629	n.2972C>A	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476629	n.2972C>A	non_coding_transcript_exon_variant	1.0	linezolid
rrl	1476630	n.2973A>G	non_coding_transcript_exon_variant	1.0	capreomycin	Uncertain significance
rrl	1476630	n.2973A>G	non_coding_transcript_exon_variant	1.0	linezolid	Uncertain significance
rpsA	1833970	c.429G>C	synonymous_variant	0.92	pyrazinamide
rpsA	1833979	c.438T>C	synonymous_variant	0.92	pyrazinamide
rpsA	1833988	c.447C>G	synonymous_variant	0.92	pyrazinamide
rpsA	1833991	c.450C>T	synonymous_variant	0.92	pyrazinamide
rpsA	1833994	c.453G>C	synonymous_variant	0.92	pyrazinamide
rpsA	1833997	c.456G>C	synonymous_variant	0.92	pyrazinamide
rpsA	1834000	c.459G>C	synonymous_variant	0.93	pyrazinamide
rpsA	1834009	c.468C>T	synonymous_variant	0.94	pyrazinamide
rpsA	1834012	c.471G>T	synonymous_variant	0.94	pyrazinamide
rpsA	1834015	c.474G>C	synonymous_variant	0.94	pyrazinamide
rpsA	1834024	c.483G>C	synonymous_variant	0.95	pyrazinamide
rpsA	1834030	c.489C>G	synonymous_variant	1.0	pyrazinamide
rpsA	1834040	p.Lys167Gln	missense_variant	1.0	pyrazinamide
rpsA	1834069	c.528G>C	synonymous_variant	1.0	pyrazinamide
rpsA	1834090	c.549G>C	synonymous_variant	1.0	pyrazinamide
rpsA	1834093	c.552G>T	synonymous_variant	1.0	pyrazinamide
rpsA	1834102	c.561T>C	synonymous_variant	1.0	pyrazinamide
rpsA	1834195	c.654G>C	synonymous_variant	1.0	pyrazinamide
rpsA	1834213	c.672G>A	synonymous_variant	1.0	pyrazinamide
rpsA	1834234	c.693G>T	synonymous_variant	1.0	pyrazinamide	Not assoc w R - Interim
rpsA	1834240	c.699T>C	synonymous_variant	1.0	pyrazinamide
rpsA	1834246	c.705G>T	synonymous_variant	1.0	pyrazinamide
rpsA	1834249	c.708T>C	synonymous_variant	1.0	pyrazinamide
rpsA	1834252	c.711C>T	synonymous_variant	1.0	pyrazinamide
rpsA	1834261	c.720A>G	synonymous_variant	1.0	pyrazinamide	Not assoc w R - Interim
rpsA	1834264	c.723G>C	synonymous_variant	1.0	pyrazinamide
rpsA	1834294	c.753G>T	synonymous_variant	1.0	pyrazinamide
rpsA	1834306	c.765T>C	synonymous_variant	1.0	pyrazinamide
rpsA	1834327	c.786G>T	synonymous_variant	1.0	pyrazinamide
rpsA	1834429	c.888C>T	synonymous_variant	1.0	pyrazinamide
rpsA	1834432	c.891G>T	synonymous_variant	1.0	pyrazinamide
rpsA	1834451	c.910T>C	synonymous_variant	1.0	pyrazinamide
clpC1	4038878	c.1827A>G	synonymous_variant	1.0	pyrazinamide	Not assoc w R - Interim
clpC1	4038890	c.1815G>A	synonymous_variant	1.0	pyrazinamide
clpC1	4038911	c.1794G>T	synonymous_variant	1.0	pyrazinamide
clpC1	4038914	c.1791G>T	synonymous_variant	1.0	pyrazinamide
clpC1	4038917	c.1788C>T	synonymous_variant	1.0	pyrazinamide
clpC1	4038923	c.1782A>C	synonymous_variant	1.0	pyrazinamide
clpC1	4038926	c.1779G>T	synonymous_variant	1.0	pyrazinamide
clpC1	4038929	c.1776G>T	synonymous_variant	1.0	pyrazinamide
clpC1	4038932	c.1773G>T	synonymous_variant	1.0	pyrazinamide
clpC1	4038935	c.1770C>T	synonymous_variant	1.0	pyrazinamide
clpC1	4038941	c.1764G>C	synonymous_variant	1.0	pyrazinamide
clpC1	4038953	c.1752A>G	synonymous_variant	1.0	pyrazinamide

Drug	Resistance	Supporting mutations	WHO confidence	Comment
rifampicin
isoniazid
ethambutol
pyrazinamide
streptomycin	rrs	n.799C>T	Uncertain significance	Mutation from literature
fluoroquinolones
moxifloxacin
ofloxacin
levofloxacin
ciprofloxacin
aminoglycosides
amikacin
capreomycin
kanamycin
cycloserine
ethionamide
clofazimine
para-aminosalicylic_acid
delamanid
bedaquiline
linezolid

TB-Profiler result