EBG00000313339 - n.2916A>T
Drug resistance types
106 Sensitive
9 RR-TB
29 HR-TB
31 MDR-TB
23 Pre-XDR-TB
2 XDR-TB
540 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 324 |
| lineage4.3.3 | 10 |
| lineage4.8 | 12 |
| lineage2.2.1 | 146 |
| lineage4.4.1.2 | 3 |
| lineage4.2.1.1 | 3 |
| lineage1.1.2 | 3 |
| lineage4.4.1.1.1 | 2 |
| lineage2.2.1;lineage4.9 | 1 |
| La1.3 | 2 |
| lineage3 | 15 |
| lineage4.1.2.1 | 17 |
| La1.8.1 | 43 |
| lineage4.3.2.1 | 5 |
| lineage3.1.2.1 | 2 |
| lineage4.7 | 3 |
| lineage2.2.1.1 | 8 |
| lineage1.1.2;lineage4 | 1 |
| lineage5.1.1 | 2 |
| lineage4 | 4 |
| lineage4.1.2 | 7 |
| lineage4.2.1 | 5 |
| lineage6.1.1 | 1 |
| lineage2.2.2 | 11 |
| lineage4.4.1.1 | 6 |
| La1.2 | 17 |
| lineage1.2.1.2.1 | 5 |
| lineage1.1.1 | 3 |
| lineage3;lineage4 | 1 |
| lineage4.2.1;lineage4.8 | 1 |
| lineage4.3.4.1 | 3 |
| lineage4.8.1 | 1 |
| lineage3.1.1 | 3 |
| lineage4.8;lineage4.9 | 2 |
| La1.8.1;lineage4 | 1 |
| lineage4.2.2.1 | 1 |
| lineage4.3.4.2.1 | 7 |
| lineage1.1.1.1 | 3 |
| lineage1.2.1.2.1;lineage4.9 | 1 |
| lineage4.5 | 5 |
| La1.8.2 | 6 |
| lineage4.1.1.3 | 4 |
| lineage4.4.2 | 4 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.1.1.1 | 2 |
| lineage1.1.3.2 | 2 |
| lineage4.9.1 | 1 |
| La1.6 | 2 |
| lineage1.2.1.2 | 2 |
| lineage4.1.1 | 1 |
| lineage4.9;lineage5.1.1 | 1 |
| La1.7.1 | 3 |
| lineage6.2.2 | 2 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.3.4.2 | 4 |
| lineage4.1.4 | 1 |
| lineage4.3.2 | 1 |
| lineage2.2.1.2 | 1 |
| La1.4 | 2 |
| lineage4.6.2.2 | 1 |
| lineage4.3 | 1 |
| lineage1.1.3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage1.2.2.1 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.1 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 740 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7069391 | Other | lineage4.9 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR2229336 | Other | lineage4.8 | None | SRR1169017 | Other | lineage2.2.1 | None | SRR16295810 | Other | lineage2.2.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR13861297 | Other | lineage4.9 | None | SRR13861481 | Other | lineage4.9 | None | SRR13861464 | Other | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR17567952 | Other | lineage4.4.1.2 | None | SRR6397588 | Other | lineage2.2.1 | None | SRR6397727 | Other | lineage4.2.1.1 | None | SRR15522850 | HR-TB | lineage1.1.2 | None | SRR3725594 | Sensitive | lineage4.9 | None | ERR7821131 | MDR-TB | lineage4.4.1.1.1 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR5065436 | HR-TB | lineage2.2.1 | None | SRR13861240 | Other | lineage4.9 | None | SRR13861314 | Other | lineage4.9 | None | SRR13861340 | Other | lineage4.9 | None | SRR13861420 | Other | lineage4.9 | None | SRR13861507 | Other | lineage4.9 | None | SRR16295780 | Other | lineage2.2.1 | None | SRR16295784 | Other | lineage2.2.1 | None | SRR16295817 | Other | lineage2.2.1 | None | ERR3077969 | Other | La1.3 | None | ERR3275190 | Other | lineage3 | nl | SRR21240055 | Other | lineage4.1.2.1 | None | SRR13861495 | HR-TB | lineage4.9 | None | SRR7240147 | Other | La1.8.1 | None | SRR13861480 | Sensitive | lineage4.9 | None | SRR6045036 | Other | lineage4.9 | None | ERR2660545 | Sensitive | lineage4.3.2.1 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | SRR6152979 | Other | lineage4.7 | None | SRR6153268 | Other | lineage2.2.1.1 | ca | SRR6397638 | Other | lineage4.2.1.1 | None | ERR181708 | RR-TB | lineage1.1.2;lineage4 | None | ERR5863931 | Pre-XDR-TB | lineage2.2.1 | None | SRR13861232 | Other | lineage4.9 | None | SRR13861156 | Other | lineage4.9 | None | SRR13861206 | Other | lineage4.9 | None | SRR13861592 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR6824516 | Sensitive | lineage2.2.1.1 | None | ERR1082134 | Sensitive | lineage5.1.1 | None | SRR6981966 | Other | lineage2.2.1 | None | SRR16295803 | Other | lineage2.2.1 | None | SRR13861217 | Other | lineage4.9 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR3273119 | MDR-TB | lineage2.2.1 | None | SRR7236216 | Other | La1.8.1 | None | SRR16295748 | Other | lineage2.2.1 | None | SRR7236178 | Other | La1.8.1 | None | ERR2229033 | Other | lineage4.8 | None | SRR13861626 | Other | lineage4.9 | None | SRR13861673 | Other | lineage4.9 | None | ERR2600576 | Pre-XDR-TB | lineage2.2.1 | None | ERR3275450 | Other | lineage4 | None | SRR13861307 | Other | lineage4.9 | None | SRR13861463 | Other | lineage4.9 | None | SRR1238559 | Other | lineage4.9 | None | SRR13861720 | Other | lineage4.9 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR1166110 | Other | lineage2.2.1 | None | SRR14781887 | MDR-TB | lineage4.2.1 | None | ERR1023250 | Sensitive | lineage6.1.1 | None | SRR16295752 | Other | lineage2.2.1 | None | SRR6045124 | Other | lineage4.9 | None | SRR10315641 | MDR-TB | lineage4.4.1.1.1 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | SRR16295806 | Other | lineage2.2.1 | None | SRR7240449 | Other | La1.8.1 | None | SRR17567930 | Sensitive | lineage4.4.1.1 | None | ERR2843536 | Sensitive | lineage2.2.1 | None | SRR13861143 | RR-TB | lineage4.9 | None | SRR13861195 | Other | lineage4.9 | None | SRR13861572 | Other | lineage4.9 | None | SRR13861566 | Other | lineage4.9 | None | SRR13861679 | Other | lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | SRR6389899 | Other | lineage4.1.2 | None | SRR16295746 | Other | lineage2.2.1 | None | SRR16295783 | Other | lineage2.2.1 | None | ERR2851371 | Other | lineage4.9 | None | ERR553231 | Other | lineage4.1.2.1 | None | SRR2101691 | Other | lineage2.2.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR7131220 | Other | lineage4.1.2.1 | None | SRR7240292 | Other | La1.8.1 | None | ERR6198389 | Other | La1.2 | None | ERR2228941 | Other | lineage4.8 | None | SRR1196582 | Other | lineage4.9 | None | ERR1873463 | MDR-TB | lineage2.2.2 | None | SRR6152910 | Sensitive | lineage1.2.1.2.1 | None | SRR16295830 | Other | lineage2.2.1 | None | ERR4769482 | Sensitive | lineage4.9 | None | ERR4187869 | Other | La1.8.1 | None | ERR5311088 | Sensitive | La1.8.1 | None | SRR13861188 | Other | lineage4.9 | None | SRR13861264 | HR-TB | lineage4.9 | None | SRR13861345 | Other | lineage4.9 | None | SRR13861468 | Other | lineage4.9 | None | SRR13861519 | Other | lineage4.9 | None | SRR13861522 | Other | lineage4.9 | None | SRR13861417 | HR-TB | lineage4.9 | None | SRR13861422 | Other | lineage4.9 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR3275567 | Other | lineage3 | nl | SRR3675557 | Other | lineage4.9 | None | ERR4769506 | Sensitive | lineage4.9 | None | SRR5153833 | Other | lineage2.2.1 | None | SRR16295744 | Other | lineage2.2.1 | None | ERR4188375 | Sensitive | lineage4.9 | None | SRR3725590 | Sensitive | lineage4.9 | None | SRR13861363 | Sensitive | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR16295813 | Other | lineage2.2.1 | None | SRR16295826 | Other | lineage2.2.1 | None | ERR718268 | Sensitive | lineage1.1.1 | None | ERR6201802 | Other | La1.2 | None | SRR1173384 | Other | lineage4.9 | None | SRR1180559 | Other | lineage4.9 | None | SRR1182891 | Other | lineage4.9 | None | SRR13861631 | Other | lineage4.9 | None | ERR4872269 | XDR-TB | lineage2.2.1 | None | SRR13861174 | Other | lineage4.9 | None | SRR13861331 | Other | lineage4.9 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR3675230 | Other | lineage3;lineage4 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR3725585 | Sensitive | lineage4.9 | None | SRR7236390 | Other | La1.8.1 | None | DRR184932 | Other | lineage2.2.1 | None | SRR7645808 | HR-TB | lineage4.2.1;lineage4.8 | None | SRR16295754 | Other | lineage2.2.1 | None | SRR14782096 | MDR-TB | lineage2.2.1 | None | DRR213597 | MDR-TB | lineage2.2.2 | None | SRR7240068 | Other | La1.8.1 | None | SRR13861157 | Other | lineage4.9 | None | ERR4769429 | Other | lineage4.9 | None | SRR13861504 | Other | lineage4.9 | None | SRR3675566 | Other | lineage4.1.2.1 | None | SRR13861243 | Other | lineage4.9 | None | SRR13861280 | Other | lineage4.9 | None | ERR4769546 | Other | La1.3 | None | SRR13861362 | Other | lineage4.9 | None | SRR13861304 | Other | lineage4.9 | None | SRR13861421 | Other | lineage4.9 | None | SRR13861426 | Other | lineage4.9 | None | SRR13861454 | Other | lineage4.9 | None | SRR13861465 | Other | lineage4.9 | None | SRR13861503 | Other | lineage4.9 | None | SRR13861521 | Other | lineage4.9 | None | SRR13861537 | Other | lineage4.9 | None | SRR13861653 | Other | lineage4.9 | None | SRR6044925 | Sensitive | lineage4.9 | None | ERR10796597 | Other | lineage4.3.3 | None | ERR1873561 | XDR-TB | lineage2.2.2 | None | ERR216930 | Sensitive | lineage4.3.4.1 | None | SRR16295785 | Other | lineage2.2.1 | None | SRR16295792 | Other | lineage2.2.1 | None | SRR16295786 | Other | lineage2.2.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR16295829 | Other | lineage2.2.1 | None | SRR1183318 | Sensitive | lineage4.9 | None | SRR12882020 | Other | lineage3.1.1 | None | ERR4187645 | Sensitive | La1.8.1 | None | SRR13861211 | HR-TB | lineage4.9 | None | SRR13861330 | Other | lineage4.9 | None | SRR16295741 | Other | lineage2.2.1 | None | SRR16295753 | Other | lineage2.2.1 | None | SRR16295816 | Other | lineage2.2.1 | None | SRR16295828 | Other | lineage2.2.1 | None | SRR7131061 | Other | lineage2.2.1 | None | SRR7236372 | Other | La1.8.1 | None | ERR5863929 | Pre-XDR-TB | lineage2.2.1 | None | ERR2228810 | Other | lineage4.8;lineage4.9 | None | ERR4187819 | Sensitive | La1.8.1;lineage4 | None | SRR7240069 | Other | La1.8.1 | None | SRR1792157 | Other | La1.8.1 | None | ERR7737918 | MDR-TB | lineage4.2.2.1 | None | ERR2228888 | Other | lineage4.8 | None | ERR4816322 | Other | lineage4.9 | None | SRR6856094 | Other | lineage2.2.1 | None | ERR4816868 | Other | lineage4.4.1.1 | None | SRR13861141 | Other | lineage4.9 | None | SRR13861159 | Other | lineage4.9 | None | SRR13861210 | Other | lineage4.9 | None | SRR13861256 | Other | lineage4.9 | None | SRR13861375 | Other | lineage4.9 | None | SRR16295764 | Other | lineage2.2.1 | None | SRR16295771 | Other | lineage2.2.1 | None | SRR16295798 | Other | lineage2.2.1 | None | SRR6982099 | Sensitive | lineage4.3.4.2.1 | None | SRR13861392 | Other | lineage4.9 | None | ERR2600577 | Pre-XDR-TB | lineage2.2.1 | None | SRR13861303 | Other | lineage4.9 | None | ERR3283046 | Sensitive | lineage4.9 | None | SRR13861440 | Other | lineage4.9 | None | SRR8600071 | Other | La1.8.1 | None | SRR5065506 | HR-TB | lineage1.1.1.1 | None | SRR13861646 | Other | lineage4.9 | None | SRR13861714 | Other | lineage4.9 | None | ERR2652981 | Sensitive | lineage4.1.2.1 | None | SRR6153036 | Other | lineage1.2.1.2.1;lineage4.9 | None | SRR11972390 | MDR-TB | lineage2.2.1 | None | SRR13861390 | Other | lineage4.9 | None | SRR5074094 | HR-TB | lineage2.2.1.1 | None | SRR1183358 | Other | lineage4.9 | None | SRR13861369 | Other | lineage4.9 | None | SRR16295787 | Other | lineage2.2.1 | None | SRR13861705 | Sensitive | lineage4.9 | None | SRR16295775 | Other | lineage2.2.1 | None | SRR13861459 | HR-TB | lineage4.9 | None | SRR13861180 | Other | lineage4.9 | None | ERR3797013 | Other | La1.8.1 | None | ERR752126 | Sensitive | lineage4.5 | th | ERR161173 | Sensitive | lineage4.3.4.2.1 | None | SRR13861372 | Other | lineage4.9 | None | SRR13861531 | Other | lineage4.9 | None | ERR6149870 | Other | La1.8.2 | None | SRR6153042 | Other | lineage4.4.1.1 | None | SRR13861373 | Other | lineage4.9 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | ERR4188021 | Other | La1.8.1 | None | SRR13861447 | Other | lineage4.9 | None | SRR13861453 | Other | lineage4.9 | None | ERR5987447 | MDR-TB | lineage2.2.1 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR13861353 | Other | lineage4.9 | None | SRR16295738 | Other | lineage2.2.1 | None | SRR16295788 | Other | lineage2.2.1 | None | SRR1792140 | Other | La1.8.1 | None | SRR1180252 | Other | lineage4.9 | None | SRR13861438 | Other | lineage4.9 | None | SRR13861312 | Other | lineage4.9 | None | SRR13861562 | Other | lineage4.9 | None | ERR181940 | Sensitive | lineage3.1.1 | None | ERR2228874 | Other | lineage4.8;lineage4.9 | None | SRR6397818 | RR-TB | lineage4.4.1.1 | None | SRR7617847 | Other | La1.8.1 | None | ERR6201832 | Other | La1.2 | None | SRR6152986 | Other | lineage2.2.1 | None | SRR13861685 | Other | lineage4.9 | None | SRR13861593 | Other | lineage4.9 | None | SRR7236379 | Other | La1.8.1 | None | ERR4188395 | Sensitive | La1.8.1 | None | SRR13861619 | Other | lineage4.9 | None | SRR13861651 | Other | lineage4.9 | None | SRR7851312 | Other | La1.2 | None | ERR6198390 | Other | La1.2 | None | SRR13861186 | Other | lineage4.9 | None | SRR6397551 | Other | lineage4.1.1.3 | None | SRR13861182 | Other | lineage4.9 | None | SRR13861281 | Other | lineage4.9 | None | SRR13861514 | Other | lineage4.9 | None | SRR13861570 | Other | lineage4.9 | None | SRR13861586 | Other | lineage4.9 | None | SRR13861682 | Sensitive | lineage4.9 | None | SRR14782537 | Pre-XDR-TB | lineage2.2.1 | None | SRR13861294 | Other | lineage4.9 | None | SRR10869292 | Pre-XDR-TB | lineage2.2.1 | None | SRR3725591 | Sensitive | lineage4.9 | None | SRR13861142 | Other | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR16295800 | Sensitive | lineage2.2.1 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR4816569 | Sensitive | lineage4.3.3 | gb | SRR2101087 | Other | lineage4.4.2 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR13861664 | Other | lineage4.9 | None | SRR13861498 | Other | lineage4.9 | None | SRR6152972 | Other | lineage2.2.1.1 | None | ERR2446509 | Other | lineage3 | nl | SRR6982066 | Other | lineage4.3.2.1 | None | ERR1873401 | MDR-TB | lineage2.2.2 | None | SRR13861175 | Other | lineage4.9 | None | SRR7236233 | Other | La1.8.1 | None | ERR6201814 | Other | La1.2 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | SRR6484983 | Sensitive | lineage4.2.1 | None | ERR2179850 | Sensitive | lineage4 | None | SRR11349188 | MDR-TB | lineage4.1.2.1 | None | SRR16295750 | Other | lineage2.2.1 | None | ERR3275434 | Other | lineage4.1.2.1 | nl | ERR6208726 | Other | La1.2 | None | SRR16295768 | Other | lineage2.2.1 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR4188381 | Other | La1.8.1 | None | SRR13861497 | HR-TB | lineage4.9 | None | SRR13861532 | Other | lineage4.9 | None | SRR1180091 | Other | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | ERR4769518 | Sensitive | lineage4.9 | None | SRR13861144 | Other | lineage4.9 | None | SRR13861391 | Other | lineage4.9 | None | SRR8346061 | RR-TB | lineage2.2.1 | None | SRR16295777 | Other | lineage2.2.1 | None | SRR16295814 | Other | lineage2.2.1 | None | SRR16295820 | Other | lineage2.2.1 | None | ERR400350 | Sensitive | lineage4.9 | None | ERR161170 | Sensitive | lineage4.3.4.1 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | ERR2179737 | HR-TB | lineage4.2.1 | None | SRR3725599 | Sensitive | lineage4.9 | None | ERR1023527 | Other | lineage4.9.1 | None | SRR10993957 | Other | La1.6 | None | SRR6397575 | Other | lineage4.3.4.2.1 | None | SRR16295762 | Other | lineage2.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR16295812 | Other | lineage2.2.1 | None | SRR13861248 | Other | lineage4.9 | None | SRR10869074 | Sensitive | lineage2.2.1.1 | None | ERR6149876 | Other | La1.8.2 | None | SRR13861147 | Other | lineage4.9 | None | SRR13861309 | Other | lineage4.9 | None | SRR13861265 | HR-TB | lineage4.9 | None | SRR13861554 | Other | lineage4.9 | None | SRR13861608 | Other | lineage4.9 | None | SRR13861680 | Other | lineage4.9 | None | SRR1183375 | Other | lineage4.9 | None | SRR14296211 | Other | La1.8.1 | None | SRR1791908 | Other | La1.8.1 | None | SRR13861457 | Other | lineage4.9 | None | SRR13861449 | Other | lineage4.9 | None | SRR13861569 | Other | lineage4.9 | None | SRR13861717 | Other | lineage4.9 | None | SRR13861584 | Other | lineage4.9 | None | SRR21685367 | MDR-TB | lineage2.2.1 | None | ERR6201843 | Other | La1.2 | None | SRR13861282 | Other | lineage4.9 | None | SRR13861325 | Other | lineage4.9 | None | SRR13861336 | Other | lineage4.9 | None | SRR13861384 | Other | lineage4.9 | None | SRR13861387 | Other | lineage4.9 | None | SRR13861476 | Other | lineage4.9 | None | SRR13861415 | Other | lineage4.9 | None | SRR13861607 | Other | lineage4.9 | None | SRR13861725 | Other | lineage4.9 | None | SRR13861668 | Other | lineage4.9 | None | SRR6152854 | Other | lineage4.1.2.1 | None | SRR6257046 | Pre-XDR-TB | lineage2.2.1 | None | SRR6397406 | Other | lineage4.1.2.1 | None | SRR6397568 | Other | lineage4.1.1 | None | ERR6201937 | Other | La1.2 | None | SRR13861225 | Sensitive | lineage4.9 | None | SRR13861510 | Other | lineage4.9 | None | SRR13861637 | Other | lineage4.9 | None | SRR13861715 | Other | lineage4.9 | None | DRR184644 | HR-TB | lineage2.2.1 | None | SRR16295742 | Other | lineage2.2.1 | None | SRR16295766 | Other | lineage2.2.1 | None | SRR13861443 | Other | lineage4.9 | None | SRR13861374 | Other | lineage4.9 | None | SRR21728339 | Other | lineage3 | None | ERR2653138 | MDR-TB | lineage4.1.2.1 | None | ERR1082121 | Sensitive | lineage4.9;lineage5.1.1 | None | SRR21737226 | Sensitive | lineage4.5 | None | SRR6397721 | Other | lineage4.2.1.1 | None | SRR1792232 | Other | La1.7.1 | None | ERR9787142 | Sensitive | lineage6.2.2 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | SRR10869318 | Sensitive | lineage2.2.1 | None | SRR16295749 | Other | lineage2.2.1 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR13861727 | Other | lineage4.9 | None | ERR163988 | Sensitive | lineage4.1.2 | None | ERR6201812 | Other | La1.2 | None | SRR13861187 | Other | lineage4.9 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | SRR13861597 | Other | lineage4.9 | None | SRR1183133 | Other | lineage4.9 | None | SRR13861648 | Other | lineage4.9 | None | SRR13861710 | Other | lineage4.9 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183709 | Other | lineage4.9 | None | SRR19612366 | Other | lineage4.5 | None | SRR13861324 | Other | lineage4.9 | None | SRR13861482 | Other | lineage4.9 | None | ERR4815022 | Other | lineage3.1.2.1 | None | SRR13861227 | Other | lineage4.9 | None | ERR2229780 | Other | lineage4.9 | None | SRR13861230 | Other | lineage4.9 | None | SRR13861231 | Other | lineage4.9 | None | SRR13861658 | Other | lineage4.9 | None | SRR16295789 | Sensitive | lineage2.2.1 | None | SRR6397585 | Other | lineage4.4.1.2 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR4187916 | Other | La1.8.1 | None | SRR13861383 | Other | lineage4.9 | None | ERR736879 | Sensitive | lineage1.1.3.2 | None | ERR3806453 | Other | lineage4.3.4.2 | None | SRR6982400 | Other | lineage2.2.1 | None | SRR1792304 | Other | La1.8.1 | None | SRR13861587 | Other | lineage4.9 | None | SRR13861683 | Other | lineage4.9 | None | SRR16295794 | Other | lineage2.2.1 | None | ERR176741 | Other | lineage4.9 | None | SRR13861583 | Other | lineage4.9 | None | SRR21675949 | Other | lineage4.3.3 | None | SRR16295735 | Other | lineage2.2.1 | None | SRR13861535 | Other | lineage4.9 | None | SRR13861487 | Other | lineage4.9 | None | SRR16295776 | Other | lineage2.2.1 | None | SRR16295825 | Other | lineage2.2.1 | None | ERR987719 | HR-TB | lineage3 | None | SRR13861486 | Other | lineage4.9 | None | ERR4817434 | Other | lineage3 | None | SRR13861534 | Other | lineage4.9 | None | SRR13861379 | Other | lineage4.9 | None | SRR13861711 | Other | lineage4.9 | None | ERR176771 | Sensitive | lineage4.3.4.2.1 | None | ERR4828962 | Sensitive | lineage4.1.4 | it | SRR13861576 | Other | lineage4.9 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR13861351 | Other | lineage4.9 | None | SRR13861598 | Other | lineage4.9 | None | ERR6338288 | Other | La1.2 | None | SRR13861692 | Other | lineage4.9 | None | ERR9786558 | Other | lineage4.3.4.2 | None | SRR16295801 | Other | lineage2.2.1 | None | ERR4769549 | Sensitive | lineage4.9 | None | SRR5067471 | Sensitive | lineage2.2.1 | None | ERR5987249 | MDR-TB | lineage4.3.2 | None | SRR6397396 | HR-TB | lineage1.2.1.2.1 | None | ERR6209443 | Other | La1.2 | None | SRR13861573 | Other | lineage4.9 | None | SRR3725595 | Sensitive | lineage4.9 | None | SRR13861579 | Other | lineage4.9 | None | ERR2693240 | Other | La1.8.1 | None | SRR13861523 | Other | lineage4.9 | None | ERR5311086 | Sensitive | lineage4.9 | None | SRR16295824 | Other | lineage2.2.1 | None | SRR21277052 | Sensitive | lineage2.2.1.1 | None | ERR7801177 | Other | lineage4.3.4.2.1 | None | ERR1873446 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR5065440 | Other | lineage2.2.1.2 | None | SRR10851629 | Sensitive | lineage4.3.3 | None | ERR4188213 | Other | La1.8.1 | None | SRR13861254 | Other | lineage4.9 | None | SRR13861394 | Other | lineage4.9 | None | ERR867572 | Other | lineage4.9 | None | SRR13861164 | Other | lineage4.9 | None | SRR16295811 | Other | lineage2.2.1 | None | SRR16295807 | Other | lineage2.2.1 | None | SRR13861406 | Other | lineage4.9 | None | SRR16295734 | Sensitive | lineage2.2.1 | None | SRR8649122 | Sensitive | lineage4.7 | None | ERR133816 | MDR-TB | lineage2.2.1 | None | SRR13861734 | Other | lineage4.9 | None | SRR22175227 | HR-TB | lineage3 | None | ERR4772210 | Other | La1.2 | None | ERR2446382 | Other | lineage4 | None | SRR3725593 | Sensitive | lineage4.9 | None | ERR7801178 | Other | lineage4.3.4.2.1 | None | SRR16278273 | Other | La1.4 | None | ERR3283044 | Other | lineage4 | None | ERR6201910 | Other | La1.2 | None | SRR13861470 | Other | lineage4.9 | None | ERR5863930 | Pre-XDR-TB | lineage2.2.1 | None | SRR5065527 | Other | lineage2.2.1 | None | ERR736816 | Other | lineage4.9 | None | ERR4769424 | Sensitive | lineage4.9 | None | ERR037234 | Sensitive | lineage4.9 | None | SRR13861559 | Other | lineage4.9 | None | SRR15723287 | Other | lineage4.4.2 | None | SRR16295757 | Other | lineage2.2.1 | None | SRR13861568 | Other | lineage4.9 | None | SRR13861219 | Other | lineage4.9 | None | SRR7240350 | Other | La1.8.1 | None | ERR5908229 | Sensitive | lineage4.3.3 | None | SRR4034769 | Other | lineage4.1.1.1 | None | SRR1183193 | Other | lineage4.9 | None | ERR2228859 | Other | lineage4.8 | None | ERR6149875 | Other | La1.8.2 | None | SRR6982140 | Other | lineage2.2.1.1 | None | ERR6866821 | Sensitive | lineage4.1.2.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | ERR108424 | Sensitive | lineage4.8 | None | SRR6397642 | Other | lineage4.4.1.1 | None | SRR6397771 | Other | lineage1.1.1.1 | None | ERR4818831 | Other | lineage3 | None | SRR7236330 | Other | La1.8.1 | None | SRR7069638 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283043 | Other | lineage4.9 | None | SRR1183080 | Other | lineage4.9 | None | ERR5758436 | Other | lineage2.2.2 | None | SRR16295765 | Other | lineage2.2.1 | None | SRR16295802 | Other | lineage2.2.1 | None | SRR13861191 | Other | lineage4.9 | None | SRR13861630 | Other | lineage4.9 | None | SRR16295740 | Other | lineage2.2.1 | None | SRR13861697 | Other | lineage4.9 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR2446248 | Other | lineage3 | nl | SRR13861452 | Other | lineage4.9 | None | SRR13861502 | HR-TB | lineage4.9 | None | SRR13861429 | Other | lineage4.9 | None | SAMN02584601 | Other | lineage2.2.1 | None | SRR13861329 | Other | lineage4.9 | None | SRR13861639 | Other | lineage4.9 | None | SRR16295804 | Other | lineage2.2.1 | None | ERR1873549 | Pre-XDR-TB | lineage2.2.2 | None | SRR13861696 | Other | lineage4.9 | None | ERR6201798 | Other | La1.2 | None | SRR16295793 | Other | lineage2.2.1 | None | ERR6149868 | Other | La1.8.2 | None | SRR13861580 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR13861286 | Other | lineage4.9 | None | SRR1011488 | Sensitive | lineage2.2.1 | None | SRR16295760 | Other | lineage2.2.1 | None | SRR13861318 | Other | lineage4.9 | None | ERR1873437 | HR-TB | lineage2.2.2 | None | SRR13861150 | Other | lineage4.9 | None | SRR6824603 | Sensitive | lineage4.4.2 | None | SRR5341390 | HR-TB | lineage1.1.2 | None | SRR16295815 | Sensitive | lineage2.2.1 | None | ERR6865901 | Sensitive | lineage4.1.2.1 | None | SRR11972274 | RR-TB | lineage1.2.1.2.1 | None | SRR13199734 | Other | La1.2 | None | SRR13861410 | Other | lineage4.9 | None | SRR13861361 | Other | lineage4.9 | None | SRR13861589 | Other | lineage4.9 | None | ERR4132447 | Other | lineage4.3.3 | None | ERR5865343 | MDR-TB | lineage2.2.1 | None | SRR16295770 | Other | lineage2.2.1 | None | SRR16295808 | Other | lineage2.2.1 | None | SRR21657198 | HR-TB | lineage4.3.3 | None | SRR7240070 | Other | La1.8.1 | None | ERR4188187 | Sensitive | La1.8.1 | None | SRR10315603 | MDR-TB | lineage4.8 | None | SRR12199431 | Other | lineage4.3 | None | SRR13861274 | Other | lineage4.9 | None | SRR16295809 | Other | lineage2.2.1 | None | SRR6982383 | Other | lineage4.3.2.1 | None | SRR13861634 | Other | lineage4.9 | None | SRR6896539 | RR-TB | lineage3 | None | SRR7236371 | Other | La1.8.1 | None | ERR4820193 | Other | lineage3 | None | SRR13861694 | Other | lineage4.9 | None | SRR21711124 | Other | lineage1.1.3 | None | SRR16295821 | Other | lineage2.2.1 | None | DRR184913 | Sensitive | lineage2.2.1 | None | ERR4187993 | Sensitive | La1.8.1 | None | ERR2446433 | Other | lineage4.1.2.1 | None | ERR3797007 | Other | La1.8.1 | None | SRR18911138 | Other | lineage3 | None | DRR185024 | Other | lineage2.2.2 | None | SRR1791909 | Other | La1.7.1 | None | SRR12882709 | Sensitive | lineage3.1.1 | None | ERR987695 | HR-TB | lineage4.3.4.2 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR13861462 | Other | lineage4.9 | None | SRR13861649 | Other | lineage4.9 | None | SRR1183179 | Other | lineage4.9 | None | ERR2514215 | Other | lineage2.2.1 | gb | SRR13861278 | Other | lineage4.9 | None | SRR1180519 | Other | lineage4.9 | None | SRR6982088 | Other | lineage4.1.1.2 | None | SRR10869302 | MDR-TB | lineage4.3.2.1 | None | SRR13861283 | Other | lineage4.9 | None | SRR21728710 | Other | lineage4.1.1.3 | None | SRR6397389 | Sensitive | lineage4.1.2.1 | None | SRR6152886 | HR-TB | lineage3 | None | SRR15315871 | Sensitive | lineage4.9 | None | SRR6824572 | MDR-TB | lineage2.2.1 | None | SRR13861236 | Other | lineage4.9 | None | SRR13861246 | Other | lineage4.9 | None | SRR13861244 | Other | lineage4.9 | None | SRR13861461 | Other | lineage4.9 | None | SRR13861642 | Other | lineage4.9 | None | ERR4769470 | Sensitive | lineage4.9 | None | DRR099689 | Sensitive | lineage1.1.1.1 | None | SRR16295827 | Other | lineage2.2.1 | None | SRR10993953 | Other | La1.6 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6397441 | Other | lineage4.5 | None | SRR13861352 | Other | lineage4.9 | None | ERR245662 | Sensitive | lineage1.2.2.1 | None | SRR13861691 | Other | lineage4.9 | None | SRR13861702 | Other | lineage4.9 | None | SRR3725596 | Sensitive | lineage4.9 | None | SRR13861494 | Other | lineage4.9 | None | SRR1183395 | Other | lineage4.9 | None | SRR7240448 | Other | La1.8.1 | None | ERR4188254 | Other | La1.8.1 | None | SRR16295767 | Other | lineage2.2.1 | None | SRR13861442 | Sensitive | lineage4.9 | None | SRR13861516 | Other | lineage4.9 | None | SRR1792392 | Other | La1.8.1 | None | SRR13861496 | Other | lineage4.9 | None | SRR2101628 | Other | lineage4.3.2.1 | None | SRR16295761 | Other | lineage2.2.1 | None | ERR5311076 | Other | La1.8.1 | None | ERR2229781 | Other | lineage4.9 | None | SRR10482948 | Other | La1.8.1 | None | SRR13861370 | Other | lineage4.9 | None | SRR13861343 | Other | lineage4.9 | None | SRR1172808 | Other | lineage4.9 | None | ERR4829238 | Sensitive | lineage3 | None | SRR1183485 | Other | lineage4.9 | None | SRR13861323 | Other | lineage4.9 | None | SRR13861192 | Other | lineage4.9 | None | SRR13861400 | Other | lineage4.9 | None | SRR13861479 | Other | lineage4.9 | None | SRR13861545 | Other | lineage4.9 | None | SRR13861627 | Other | lineage4.9 | None | SRR13861556 | Other | lineage4.9 | None | SRR13861707 | Other | lineage4.9 | None | SRR13861428 | Other | lineage4.9 | None | SRR13861241 | HR-TB | lineage4.9 | None | SRR13861200 | Other | lineage4.9 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | SRR1183511 | Other | lineage4.9 | None | SRR13861431 | Other | lineage4.9 | None | SRR13861555 | Other | lineage4.9 | None | SRR13861641 | Other | lineage4.9 | None | SRR13861624 | Other | lineage4.9 | None | SRR17406750 | Other | lineage1.1.2 | None | ERR9786258 | Sensitive | lineage4.3.4.1 | None | SRR6397770 | Other | lineage4.7 | None | SRR7131050 | MDR-TB | lineage4.3.3 | None | SRR13861567 | Other | lineage4.9 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | SRR10869203 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR16295763 | Other | lineage2.2.1 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR13861389 | Other | lineage4.9 | None | SRR16295747 | Other | lineage2.2.1 | None | SRR16295819 | Other | lineage2.2.1 | None | SRR13861533 | Other | lineage4.9 | None | ERR10762317 | Pre-XDR-TB | lineage4.2.1 | None | SRR13861600 | Other | lineage4.9 | None | SRR13861617 | Other | lineage4.9 | None | SRR13861416 | Other | lineage4.9 | None | SRR15316549 | RR-TB | lineage4.4.2 | None | SRR16295779 | Other | lineage2.2.1 | None | SRR6044942 | HR-TB | lineage4.9 | None | SRR13861161 | Other | lineage4.9 | None | SRR1183197 | Other | lineage4.9 | None | ERR2600442 | MDR-TB | lineage2.2.1 | None | SRR6982494 | Other | lineage2.2.2 | None | SRR13861728 | Other | lineage4.9 | None | ERR3804140 | Sensitive | lineage6.2.2 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR6149874 | Other | La1.8.2 | None | ERR4816417 | Other | lineage4.9 | None | ERR6140667 | Other | La1.8.2 | None | SRR13861446 | Other | lineage4.9 | None | SRR13861377 | Other | lineage4.9 | None | SRR13861530 | Other | lineage4.9 | None | ERR2229358 | Other | lineage4.8 | None | ERR4814976 | Other | lineage4.9 | None | SRR13861491 | Other | lineage4.9 | None | SRR13861433 | Other | lineage4.9 | None | SRR6824550 | Sensitive | lineage4.5 | None | SRR6397548 | HR-TB | lineage1.2.1.2.1 | None | ERR4769493 | Other | lineage4.9 | None | SRR10869017 | Pre-XDR-TB | lineage4.3.3 | None | ERR6336784 | Sensitive | lineage1.2.1.2 | None | SRR6982275 | Other | lineage2.2.1 | None | SRR13861693 | Other | lineage4.9 | None | SRR13861397 | HR-TB | lineage4.9 | None | SRR3105762 | Sensitive | lineage4.1 | None | SRR3725597 | Sensitive | lineage4.9 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR13199746 | Other | La1.7.1 | None | ERR6336794 | Sensitive | lineage1.2.1.2.1 | None | SRR13861423 | Other | lineage4.9 | None | SRR13861515 | Other | lineage4.9 | None | ERR4188160 | Other | La1.8.1 | None | SRR13861158 | Other | lineage4.9 | None | SRR13861285 | Other | lineage4.9 | None | SRR13861403 | Other | lineage4.9 | None | SRR13861419 | Other | lineage4.9 | None | SRR13861499 | Other | lineage4.9 | None | SRR16295769 | Other | lineage2.2.1 | None | SRR16295773 | Other | lineage2.2.1 | None | SRR13861356 | Other | lineage4.9 | None | SRR16295791 | Other | lineage2.2.1 | None | ERR8665619 | Pre-XDR-TB | lineage2.2.1 | None | SRR2101643 | Other | lineage2.2.1 | None | SRR13861411 | Other | lineage4.9 | None | SRR13861268 | Other | lineage4.9 | None | SRR13861299 | Other | lineage4.9 | None | SRR16295799 | Other | lineage2.2.1 | None | ERR1203071 | Sensitive | lineage4.8 | None | ERR9786844 | Other | lineage4.3.4.2 | None | SRR1184383 | Other | lineage4.9 | None | SRR16295755 | Other | lineage2.2.1 | None | SRR16295772 | Other | lineage2.2.1 | None | SRR13861207 | Other | lineage4.9 | None | SRR6982053 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR13861179 | Other | lineage4.9 | None | SRR16295736 | Other | lineage2.2.1 | None | SRR16295737 | Other | lineage2.2.1 | None | SRR16295774 | Sensitive | lineage2.2.1 | None | SRR16295745 | Other | lineage2.2.1 | None | SRR16295782 | Other | lineage2.2.1 | None | SRR1792265 | Other | La1.8.1 | None | SRR3725589 | Sensitive | lineage4.9 | None | SRR13861669 | Other | lineage4.9 | None | SRR16295797 | Other | lineage2.2.1 | None | SRR21240084 | Sensitive | lineage4.1.2.1 | None | ERR502480 | Other | lineage5.1.1 | None | SRR16295739 | Other | lineage2.2.1 | None | SRR16295790 | Other | lineage2.2.1 | None | SRR6982194 | Other | lineage2.2.1 | None | ERR4024812 | Sensitive | lineage4.1.2.1 | None | ERR4769537 | Sensitive | lineage4.9 | None | SRR13861735 | Other | lineage4.9 | None | SRR13861718 | Other | lineage4.9 | None | SRR13861724 | Other | lineage4.9 | None | SRR13861162 | Other | lineage4.9 | None | SRR12420396 | Sensitive | lineage2.2.1 | None | SRR7236240 | Other | La1.8.1 | None | SRR11972420 | MDR-TB | lineage2.2.1 | None | ERR212033 | Other | lineage4.9 | None | ERR2228873 | Other | lineage4.8 | None | SRR6789621 | Other | lineage4.9 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | ERR2229337 | Other | lineage4.8 | None | ERR4769418 | Other | La1.2 | None | SRR13861201 | Other | lineage4.9 | None | SRR13861213 | Other | lineage4.9 | None | SRR13861430 | Other | lineage4.9 | None | SRR16295743 | Other | lineage2.2.1 | None | SRR16295751 | Other | lineage2.2.1 | None | SRR16295822 | Other | lineage2.2.1 | None | SRR13861258 | Other | lineage4.9 | None | SRR16295758 | Other | lineage2.2.1 | None |
|---|
