TB-Profiler result

Run: SRR6044925
Summary

Run ID: SRR6044925

Sample name:

Date: 04-04-2023 11:49:46

Number of reads: 41558

Percentage reads mapped: 1.08

Strain: lineage4.9

Drug-resistance: Sensitive

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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage4 Euro-American LAM;T;S;X;H None 1.0
lineage4.9 Euro-American (H37Rv-like) T1 None 1.0
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrA 7084 c.-218A>G upstream_gene_variant 1.0
gyrA 7093 c.-209T>C upstream_gene_variant 1.0
gyrA 7100 c.-202T>C upstream_gene_variant 1.0
gyrA 7108 c.-194G>A upstream_gene_variant 1.0
gyrA 7120 c.-182T>C upstream_gene_variant 1.0
gyrA 7123 c.-179C>G upstream_gene_variant 1.0
gyrA 7129 c.-173T>G upstream_gene_variant 1.0
gyrA 7132 c.-170T>G upstream_gene_variant 1.0
gyrA 7136 c.-166T>C upstream_gene_variant 1.0
gyrA 7141 c.-161T>G upstream_gene_variant 1.0
gyrA 7144 c.-158A>G upstream_gene_variant 1.0
gyrA 7150 c.-152G>T upstream_gene_variant 1.0
gyrA 7153 c.-149G>C upstream_gene_variant 1.0
gyrA 7168 c.-134C>G upstream_gene_variant 1.0
gyrA 7178 c.-124T>C upstream_gene_variant 1.0
gyrA 7198 c.-104C>T upstream_gene_variant 1.0
rpoB 761036 c.1230G>C synonymous_variant 1.0
rpoB 761037 c.1231T>C synonymous_variant 1.0
rpoB 761057 c.1251G>C synonymous_variant 1.0
rpoB 761096 c.1290G>C synonymous_variant 1.0
rpoB 761097 c.1291_1293delAGCinsTCG synonymous_variant 1.0
rpoB 761102 c.1296A>G synonymous_variant 1.0
rpoB 761132 c.1326G>T synonymous_variant 1.0
rpoB 761133 c.1327T>C synonymous_variant 1.0
rpoB 761765 c.1959T>C synonymous_variant 1.0
rpoB 761768 c.1962G>C synonymous_variant 1.0
rpoB 761778 p.Asn658Ala missense_variant 1.0
rpoB 761792 c.1986T>C synonymous_variant 1.0
rpoB 761813 c.2007T>C synonymous_variant 1.0
rpoB 761819 c.2013G>C synonymous_variant 1.0
rpoB 761834 c.2028T>C synonymous_variant 1.0
rpoB 761848 p.Cys681Ser missense_variant 1.0
rpoB 761852 c.2046C>G synonymous_variant 1.0
rpoB 761864 c.2058G>C synonymous_variant 1.0
rpoB 761867 c.2061C>T synonymous_variant 1.0
rpoB 761873 c.2067A>C synonymous_variant 1.0
rpoB 761876 c.2070C>G synonymous_variant 1.0
rpoB 761879 c.2073G>A synonymous_variant 1.0
rpoB 761885 c.2079T>C synonymous_variant 1.0
rpoB 761894 c.2088C>T synonymous_variant 1.0
rpoB 761903 c.2097T>C synonymous_variant 1.0
rpoC 762956 c.-414G>C upstream_gene_variant 1.0
rpoC 762959 c.-411G>C upstream_gene_variant 1.0
rpoC 762962 c.-408C>T upstream_gene_variant 1.0
rpoC 762971 c.-399G>A upstream_gene_variant 1.0
rpoC 762983 c.-387C>G upstream_gene_variant 1.0
rpoC 762995 c.-375G>T upstream_gene_variant 1.0
rpoC 763031 c.-339T>G upstream_gene_variant 1.0
rpoC 763040 c.-330C>G upstream_gene_variant 1.0
rpoC 763053 c.-317T>C upstream_gene_variant 1.0
rpoC 763070 c.-300T>C upstream_gene_variant 1.0
rpoC 763082 c.-288C>T upstream_gene_variant 1.0
rpoC 763822 c.453C>G synonymous_variant 1.0
rpoC 763825 c.456G>A synonymous_variant 1.0
rpoC 763828 c.459C>G synonymous_variant 1.0
rpoC 763836 p.Ala156Val missense_variant 1.0
rpoC 763858 c.489A>G synonymous_variant 1.0
rpoC 763872 p.Gly168Ala missense_variant 1.0
rpoC 763876 p.Glu169Asp missense_variant 1.0
rpoC 763879 c.510A>G synonymous_variant 1.0
rpoC 763888 c.519G>C synonymous_variant 1.0
rpoC 763891 c.522G>C synonymous_variant 1.0
rpoC 763894 c.525A>G synonymous_variant 1.0
rpoC 763900 c.531G>C synonymous_variant 1.0
rpoC 766726 c.3357T>C synonymous_variant 1.0
rpoC 766738 c.3369G>C synonymous_variant 1.0
rpoC 766750 c.3381C>G synonymous_variant 1.0
rpoC 766753 c.3384C>T synonymous_variant 1.0
atpE 1461149 c.105T>G synonymous_variant 1.0
atpE 1461164 c.120C>T synonymous_variant 1.0
atpE 1461167 c.123G>C synonymous_variant 1.0
atpE 1461170 c.126A>G synonymous_variant 1.0
atpE 1461179 c.135G>A synonymous_variant 1.0
atpE 1461182 c.138A>G synonymous_variant 1.0
atpE 1461185 c.141G>C synonymous_variant 1.0
atpE 1461188 c.144G>T synonymous_variant 1.0
atpE 1461191 c.147G>C synonymous_variant 1.0
atpE 1461197 c.153A>C synonymous_variant 1.0
atpE 1461212 c.168C>G synonymous_variant 1.0
atpE 1461219 c.175T>C synonymous_variant 1.0
rrs 1471896 n.51T>C non_coding_transcript_exon_variant 1.0
rrs 1471900 n.55C>T non_coding_transcript_exon_variant 1.0
rrs 1471914 n.69A>G non_coding_transcript_exon_variant 1.0
rrs 1471919 n.74A>C non_coding_transcript_exon_variant 1.0
rrs 1472089 n.244C>T non_coding_transcript_exon_variant 1.0
rrs 1472094 n.249T>A non_coding_transcript_exon_variant 1.0
rrs 1472102 n.257G>A non_coding_transcript_exon_variant 1.0
rrs 1472106 n.261G>A non_coding_transcript_exon_variant 1.0
rrs 1472112 n.267C>T non_coding_transcript_exon_variant 1.0
rrs 1472113 n.268T>C non_coding_transcript_exon_variant 1.0
rrs 1472127 n.282C>T non_coding_transcript_exon_variant 1.0
rrs 1472129 n.284G>C non_coding_transcript_exon_variant 1.0
rrs 1472137 n.292G>A non_coding_transcript_exon_variant 1.0
rrs 1472150 n.305T>A non_coding_transcript_exon_variant 1.0
rrs 1472151 n.306C>A non_coding_transcript_exon_variant 1.0
rrs 1472172 n.327T>C non_coding_transcript_exon_variant 1.0
rrs 1472203 n.358G>A non_coding_transcript_exon_variant 1.0
rrs 1472210 n.365A>C non_coding_transcript_exon_variant 1.0
rrs 1472213 n.368G>C non_coding_transcript_exon_variant 1.0
rrs 1472215 n.370A>G non_coding_transcript_exon_variant 1.0
rrs 1472225 n.380C>A non_coding_transcript_exon_variant 1.0
rrs 1472234 n.389T>C non_coding_transcript_exon_variant 1.0
rrs 1472236 n.391C>G non_coding_transcript_exon_variant 1.0
rrs 1472240 n.395G>A non_coding_transcript_exon_variant 1.0
rrs 1472251 n.406G>A non_coding_transcript_exon_variant 1.0
rrs 1472253 n.408G>T non_coding_transcript_exon_variant 0.94
rrs 1472259 n.414C>A non_coding_transcript_exon_variant 1.0
rrs 1472333 n.490dupA non_coding_transcript_exon_variant 1.0
rrs 1472338 n.493A>C non_coding_transcript_exon_variant 1.0
rrs 1472344 n.499C>T non_coding_transcript_exon_variant 1.0
rrs 1472379 n.534T>G non_coding_transcript_exon_variant 1.0
rrs 1472382 n.537G>A non_coding_transcript_exon_variant 1.0
rrs 1472507 n.662C>G non_coding_transcript_exon_variant 1.0
rrs 1472517 n.672T>A non_coding_transcript_exon_variant 1.0
rrs 1472518 n.673G>C non_coding_transcript_exon_variant 1.0
rrs 1472530 n.685G>A non_coding_transcript_exon_variant 1.0
rrs 1472537 n.692C>T non_coding_transcript_exon_variant 1.0
rrs 1472544 n.699C>G non_coding_transcript_exon_variant 1.0
rrs 1472545 n.700A>T non_coding_transcript_exon_variant 1.0
rrs 1472557 n.712G>A non_coding_transcript_exon_variant 1.0
rrs 1472570 n.725G>A non_coding_transcript_exon_variant 0.97
rrs 1472571 n.726G>C non_coding_transcript_exon_variant 0.97
rrs 1472581 n.736A>T non_coding_transcript_exon_variant 0.97
rrs 1472598 n.753A>C non_coding_transcript_exon_variant 0.97
rrs 1472616 n.771G>A non_coding_transcript_exon_variant 0.98
rrs 1472655 n.810G>A non_coding_transcript_exon_variant 0.98
rrs 1472658 n.813G>A non_coding_transcript_exon_variant 0.97
rrs 1472659 n.814G>A non_coding_transcript_exon_variant 0.97
rrs 1472661 n.816A>G non_coding_transcript_exon_variant 0.97
rrs 1472669 n.824_825insTAG non_coding_transcript_exon_variant 0.97
rrs 1472677 n.832C>G non_coding_transcript_exon_variant 1.0
rrs 1472678 n.833T>A non_coding_transcript_exon_variant 1.0
rrs 1472679 n.834_835insAC non_coding_transcript_exon_variant 1.0
rrs 1472684 n.841_846delGATCCG non_coding_transcript_exon_variant 1.0
rrs 1472697 n.852T>A non_coding_transcript_exon_variant 1.0
rrs 1472700 n.855C>T non_coding_transcript_exon_variant 1.0
rrs 1472705 n.860G>A non_coding_transcript_exon_variant 1.0
rrs 1472713 n.868T>C non_coding_transcript_exon_variant 1.0
rrs 1472715 n.870C>T non_coding_transcript_exon_variant 1.0
rrs 1472716 n.871C>T non_coding_transcript_exon_variant 1.0
rrs 1472734 n.889C>T non_coding_transcript_exon_variant 1.0
rrs 1472741 n.896G>A non_coding_transcript_exon_variant 1.0
rrs 1472744 n.899A>G non_coding_transcript_exon_variant 1.0
rrs 1472767 n.922G>A non_coding_transcript_exon_variant 1.0
rrs 1472779 n.934G>A non_coding_transcript_exon_variant 1.0
rrs 1472781 n.936C>T non_coding_transcript_exon_variant 1.0
rrs 1472786 n.941C>T non_coding_transcript_exon_variant 0.97
rrs 1472793 n.948A>T non_coding_transcript_exon_variant 1.0
rrs 1472803 n.958T>A non_coding_transcript_exon_variant 1.0
rrs 1472824 n.979T>A non_coding_transcript_exon_variant 1.0
rrs 1472827 n.982G>T non_coding_transcript_exon_variant 1.0
rrs 1472828 n.983T>C non_coding_transcript_exon_variant 1.0
rrs 1472895 n.1050C>T non_coding_transcript_exon_variant 1.0
rrs 1472953 n.1109_1112delTCTC non_coding_transcript_exon_variant 1.0
rrs 1472959 n.1114_1115insTTTA non_coding_transcript_exon_variant 1.0
rrs 1472970 n.1126delG non_coding_transcript_exon_variant 1.0
rrs 1472973 n.1128A>T non_coding_transcript_exon_variant 1.0
rrs 1472974 n.1129A>C non_coding_transcript_exon_variant 1.0
rrs 1472975 n.1130T>G non_coding_transcript_exon_variant 1.0
rrs 1472982 n.1137G>C non_coding_transcript_exon_variant 1.0
rrs 1472987 n.1142G>T non_coding_transcript_exon_variant 1.0
rrs 1472988 n.1143T>A non_coding_transcript_exon_variant 1.0
rrs 1472991 n.1146G>A non_coding_transcript_exon_variant 1.0
rrs 1472992 n.1147A>T non_coding_transcript_exon_variant 1.0
rrs 1473002 n.1157G>T non_coding_transcript_exon_variant 1.0
rrs 1473004 n.1159T>A non_coding_transcript_exon_variant 1.0
rrs 1473008 n.1163C>A non_coding_transcript_exon_variant 1.0
rrs 1473009 n.1164T>C non_coding_transcript_exon_variant 1.0
rrs 1473020 n.1175T>C non_coding_transcript_exon_variant 1.0
rrs 1473035 n.1190G>A non_coding_transcript_exon_variant 1.0
rrs 1473053 n.1208T>A non_coding_transcript_exon_variant 1.0
rrs 1473056 n.1211A>T non_coding_transcript_exon_variant 1.0
rrs 1473062 n.1217T>A non_coding_transcript_exon_variant 1.0
rrs 1473129 n.1284C>T non_coding_transcript_exon_variant 1.0
rrs 1473145 n.1300C>T non_coding_transcript_exon_variant 1.0
rrs 1473147 n.1302G>C non_coding_transcript_exon_variant 1.0
rrs 1473148 n.1303G>A non_coding_transcript_exon_variant 1.0
rrs 1473150 n.1305T>G non_coding_transcript_exon_variant 1.0
rrs 1473161 n.1316A>C non_coding_transcript_exon_variant 1.0
rrs 1473163 n.1318C>T non_coding_transcript_exon_variant 1.0
rrs 1473164 n.1319C>G non_coding_transcript_exon_variant 1.0
rrs 1473166 n.1321G>A non_coding_transcript_exon_variant 1.0
rrs 1473177 n.1332G>A non_coding_transcript_exon_variant 1.0
rrs 1473179 n.1334C>T non_coding_transcript_exon_variant 1.0
rrs 1473192 n.1347A>G non_coding_transcript_exon_variant 1.0
rrs 1473205 n.1360T>C non_coding_transcript_exon_variant 1.0
rrs 1473226 n.1381C>T non_coding_transcript_exon_variant 1.0
rrs 1473352 n.1507C>T non_coding_transcript_exon_variant 1.0
rrl 1473851 n.194G>C non_coding_transcript_exon_variant 1.0
rrl 1473862 n.205C>A non_coding_transcript_exon_variant 1.0
rrl 1473870 n.213G>T non_coding_transcript_exon_variant 1.0
rrl 1473871 n.214T>G non_coding_transcript_exon_variant 1.0
rrl 1473876 n.219G>A non_coding_transcript_exon_variant 1.0
rrl 1473887 n.230T>G non_coding_transcript_exon_variant 1.0
rrl 1473888 n.231T>A non_coding_transcript_exon_variant 1.0
rrl 1473898 n.241C>T non_coding_transcript_exon_variant 1.0
rrl 1473899 n.242A>C non_coding_transcript_exon_variant 1.0
rrl 1473905 n.248T>C non_coding_transcript_exon_variant 1.0
rrl 1473926 n.269G>C non_coding_transcript_exon_variant 1.0
rrl 1474758 n.1101G>A non_coding_transcript_exon_variant 1.0
rrl 1474777 n.1120T>C non_coding_transcript_exon_variant 1.0
rrl 1474779 n.1122G>A non_coding_transcript_exon_variant 1.0
rrl 1474780 n.1123C>T non_coding_transcript_exon_variant 1.0
rrl 1474782 n.1125G>A non_coding_transcript_exon_variant 1.0
rrl 1474790 n.1133C>T non_coding_transcript_exon_variant 1.0
rrl 1474798 n.1141C>T non_coding_transcript_exon_variant 1.0
rrl 1474804 n.1147C>T non_coding_transcript_exon_variant 1.0
rrl 1474823 n.1166C>G non_coding_transcript_exon_variant 1.0
rrl 1474827 n.1170C>T non_coding_transcript_exon_variant 1.0
rrl 1474831 n.1174A>C non_coding_transcript_exon_variant 1.0
rrl 1474844 n.1187G>T non_coding_transcript_exon_variant 1.0
rrl 1474866 n.1209C>A non_coding_transcript_exon_variant 1.0
rrl 1474896 n.1239A>G non_coding_transcript_exon_variant 1.0
rrl 1474902 n.1245T>C non_coding_transcript_exon_variant 1.0
rrl 1474904 n.1247G>C non_coding_transcript_exon_variant 1.0
rrl 1474913 n.1256T>A non_coding_transcript_exon_variant 1.0
rrl 1474920 n.1263G>A non_coding_transcript_exon_variant 1.0
rrl 1474927 n.1271delC non_coding_transcript_exon_variant 1.0
rrl 1474931 n.1274G>A non_coding_transcript_exon_variant 1.0
rrl 1474938 n.1281G>A non_coding_transcript_exon_variant 1.0
rrl 1474946 n.1289C>T non_coding_transcript_exon_variant 1.0
rrl 1475659 n.2002G>A non_coding_transcript_exon_variant 1.0
rrl 1475687 n.2030C>T non_coding_transcript_exon_variant 0.92
rrl 1475696 n.2039T>C non_coding_transcript_exon_variant 0.94
rrl 1475703 n.2046A>G non_coding_transcript_exon_variant 0.94
rrl 1475707 n.2050T>A non_coding_transcript_exon_variant 0.95
rrl 1475716 n.2059A>G non_coding_transcript_exon_variant 0.95
rrl 1475747 n.2090A>G non_coding_transcript_exon_variant 0.92
rrl 1475803 n.2146T>C non_coding_transcript_exon_variant 1.0
rrl 1475804 n.2147G>C non_coding_transcript_exon_variant 1.0
rrl 1475816 n.2159C>G non_coding_transcript_exon_variant 0.93
rrl 1475817 n.2160A>G non_coding_transcript_exon_variant 0.94
rrl 1475843 n.2186G>A non_coding_transcript_exon_variant 0.94
rrl 1475849 n.2192G>A non_coding_transcript_exon_variant 0.94
rrl 1475853 n.2196C>T non_coding_transcript_exon_variant 0.92
rrl 1475858 n.2201T>C non_coding_transcript_exon_variant 0.92
rrl 1475975 n.2318C>T non_coding_transcript_exon_variant 1.0
rrl 1475977 n.2320A>G non_coding_transcript_exon_variant 1.0
rrl 1475988 n.2331A>T non_coding_transcript_exon_variant 1.0
rrl 1476135 n.2478T>C non_coding_transcript_exon_variant 1.0
rrl 1476141 n.2484A>G non_coding_transcript_exon_variant 1.0
rrl 1476153 n.2496T>C non_coding_transcript_exon_variant 1.0
rrl 1476164 n.2507A>G non_coding_transcript_exon_variant 0.92
rrl 1476165 n.2508T>A non_coding_transcript_exon_variant 1.0
rrl 1476181 n.2524A>C non_coding_transcript_exon_variant 0.92
rrl 1476194 n.2537A>G non_coding_transcript_exon_variant 1.0
rrl 1476195 n.2538C>A non_coding_transcript_exon_variant 1.0
rrl 1476196 n.2539C>A non_coding_transcript_exon_variant 1.0
rrl 1476200 n.2543A>T non_coding_transcript_exon_variant 1.0
rrl 1476201 n.2544C>T non_coding_transcript_exon_variant 1.0
rrl 1476204 n.2547C>A non_coding_transcript_exon_variant 1.0
rrl 1476210 n.2553G>T non_coding_transcript_exon_variant 1.0
rrl 1476211 n.2554G>T non_coding_transcript_exon_variant 1.0
rrl 1476212 n.2555T>C non_coding_transcript_exon_variant 1.0
rrl 1476214 n.2557G>A non_coding_transcript_exon_variant 1.0
rrl 1476215 n.2558C>A non_coding_transcript_exon_variant 1.0
rrl 1476221 n.2564T>C non_coding_transcript_exon_variant 0.66
rrl 1476225 n.2568T>G non_coding_transcript_exon_variant 1.0
rrl 1476229 n.2572C>G non_coding_transcript_exon_variant 1.0
rrl 1476251 n.2594T>C non_coding_transcript_exon_variant 1.0
rrl 1476260 n.2603A>G non_coding_transcript_exon_variant 1.0
rrl 1476280 n.2623A>C non_coding_transcript_exon_variant 1.0
rrl 1476293 n.2636C>T non_coding_transcript_exon_variant 1.0
rrl 1476294 n.2637A>G non_coding_transcript_exon_variant 1.0
rrl 1476295 n.2638C>G non_coding_transcript_exon_variant 1.0
rrl 1476296 n.2639C>T non_coding_transcript_exon_variant 1.0
rrl 1476297 n.2640C>A non_coding_transcript_exon_variant 1.0
rrl 1476301 n.2644A>C non_coding_transcript_exon_variant 1.0
rrl 1476302 n.2645G>A non_coding_transcript_exon_variant 1.0
rrl 1476311 n.2654G>C non_coding_transcript_exon_variant 1.0
rrl 1476312 n.2655T>C non_coding_transcript_exon_variant 1.0
rrl 1476313 n.2656G>A non_coding_transcript_exon_variant 1.0
rrl 1476332 n.2675G>C non_coding_transcript_exon_variant 1.0
rrl 1476338 n.2681C>T non_coding_transcript_exon_variant 1.0
rrl 1476353 n.2696G>T non_coding_transcript_exon_variant 1.0
rrl 1476358 n.2701T>C non_coding_transcript_exon_variant 1.0
rrl 1476372 n.2715T>C non_coding_transcript_exon_variant 1.0
rrl 1476382 n.2725A>G non_coding_transcript_exon_variant 1.0
rrl 1476383 n.2726T>A non_coding_transcript_exon_variant 1.0
rrl 1476408 n.2751G>A non_coding_transcript_exon_variant 1.0
rrl 1476425 n.2768G>A non_coding_transcript_exon_variant 1.0
rrl 1476428 n.2771C>T non_coding_transcript_exon_variant 1.0
rrl 1476466 n.2809C>T non_coding_transcript_exon_variant 1.0
rrl 1476481 n.2824T>C non_coding_transcript_exon_variant 1.0
rrl 1476506 n.2849T>C non_coding_transcript_exon_variant 1.0
rrl 1476512 n.2855C>T non_coding_transcript_exon_variant 1.0
rrl 1476514 n.2857C>T non_coding_transcript_exon_variant 1.0
rrl 1476517 n.2860C>T non_coding_transcript_exon_variant 1.0
rrl 1476519 n.2862C>G non_coding_transcript_exon_variant 1.0
rrl 1476524 n.2867C>A non_coding_transcript_exon_variant 1.0
rrl 1476525 n.2868A>G non_coding_transcript_exon_variant 1.0
rrl 1476530 n.2873C>T non_coding_transcript_exon_variant 1.0
rrl 1476536 n.2879G>A non_coding_transcript_exon_variant 1.0
rrl 1476537 n.2880A>G non_coding_transcript_exon_variant 1.0
rrl 1476538 n.2881A>G non_coding_transcript_exon_variant 1.0
rrl 1476540 n.2883C>G non_coding_transcript_exon_variant 1.0
rrl 1476547 n.2890C>T non_coding_transcript_exon_variant 1.0
rrl 1476567 n.2910C>T non_coding_transcript_exon_variant 1.0
rrl 1476573 n.2916A>T non_coding_transcript_exon_variant 1.0
rrl 1476577 n.2920T>G non_coding_transcript_exon_variant 1.0
rrl 1476594 n.2937C>T non_coding_transcript_exon_variant 1.0
rrl 1476603 n.2946G>A non_coding_transcript_exon_variant 1.0
rrl 1476607 n.2950C>T non_coding_transcript_exon_variant 1.0
rrl 1476608 n.2951C>G non_coding_transcript_exon_variant 1.0
rrl 1476614 n.2957A>G non_coding_transcript_exon_variant 1.0
rrl 1476619 n.2962C>T non_coding_transcript_exon_variant 1.0
rrl 1476624 n.2967T>A non_coding_transcript_exon_variant 1.0
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 1.0
rrl 1476630 n.2973A>G non_coding_transcript_exon_variant 1.0
rrl 1476637 n.2980C>G non_coding_transcript_exon_variant 1.0
rrl 1476657 n.3000G>T non_coding_transcript_exon_variant 0.5
rrl 1476689 n.3032A>T non_coding_transcript_exon_variant 1.0
rrl 1476692 n.3035T>A non_coding_transcript_exon_variant 1.0
rrl 1476695 n.3038T>A non_coding_transcript_exon_variant 1.0
rrl 1476710 n.3053C>A non_coding_transcript_exon_variant 1.0
rrl 1476720 n.3063G>T non_coding_transcript_exon_variant 1.0
rrl 1476723 n.3066T>A non_coding_transcript_exon_variant 1.0
rrl 1476725 n.3068C>T non_coding_transcript_exon_variant 1.0
rrl 1476726 n.3069A>G non_coding_transcript_exon_variant 1.0
rrl 1476732 n.3075T>C non_coding_transcript_exon_variant 1.0
inhA 1673901 c.-301A>G upstream_gene_variant 1.0
inhA 1673916 c.-286A>C upstream_gene_variant 1.0
inhA 1673922 c.-280T>C upstream_gene_variant 1.0
inhA 1673925 c.-277C>A upstream_gene_variant 1.0
inhA 1673931 c.-271C>A upstream_gene_variant 1.0
inhA 1673934 c.-268C>T upstream_gene_variant 1.0
inhA 1673946 c.-256C>A upstream_gene_variant 1.0
inhA 1673950 c.-252C>T upstream_gene_variant 1.0
fabG1 1673960 p.Ala174Val missense_variant 1.0
inhA 1673982 c.-220G>C upstream_gene_variant 1.0
inhA 1673988 c.-214G>C upstream_gene_variant 1.0
inhA 1673991 c.-211C>T upstream_gene_variant 1.0
inhA 1674015 c.-187C>A upstream_gene_variant 1.0
inhA 1674018 c.-184G>C upstream_gene_variant 1.0
inhA 1674019 c.-183C>T upstream_gene_variant 1.0
inhA 1674033 c.-169T>C upstream_gene_variant 1.0
fabG1 1674037 p.Gln200Glu missense_variant 1.0
rpsA 1833802 c.261A>G synonymous_variant 1.0
rpsA 1833811 c.270G>T synonymous_variant 1.0
rpsA 1833820 c.279G>A synonymous_variant 1.0
kasA 2518693 c.579C>G synonymous_variant 1.0
kasA 2518696 c.582C>G synonymous_variant 1.0
kasA 2518702 c.588C>T synonymous_variant 1.0
kasA 2518705 c.591T>C synonymous_variant 1.0
kasA 2518717 c.603C>G synonymous_variant 1.0
kasA 2518723 c.609G>A synonymous_variant 1.0
kasA 2518747 c.633C>G synonymous_variant 1.0
kasA 2518765 c.651G>A synonymous_variant 1.0
kasA 2518768 c.654C>G synonymous_variant 1.0
kasA 2518783 c.669T>C synonymous_variant 1.0
kasA 2518792 c.678C>G synonymous_variant 1.0
kasA 2518795 c.681C>G synonymous_variant 1.0
rpoA 3878067 c.441C>G synonymous_variant 1.0
rpoA 3878070 c.438T>C synonymous_variant 1.0
rpoA 3878082 c.426T>C synonymous_variant 1.0
rpoA 3878103 c.405A>G synonymous_variant 1.0
rpoA 3878106 c.402G>C synonymous_variant 1.0
rpoA 3878118 c.390T>C synonymous_variant 1.0
rpoA 3878127 c.381G>C synonymous_variant 1.0
rpoA 3878130 c.378C>G synonymous_variant 1.0
embB 4248185 c.1672T>C synonymous_variant 1.0
embB 4248190 c.1677G>C synonymous_variant 1.0
embB 4248199 c.1686A>G synonymous_variant 1.0
embB 4248200 p.Ile563Val missense_variant 1.0
embB 4248206 p.Ser565Gly missense_variant 1.0
embB 4248214 c.1701C>G synonymous_variant 1.0
embB 4248220 c.1707A>T synonymous_variant 1.0