SRR13861567
|
Other
|
lineage4.9
|
None
|
SAMN02567676
|
MDR-TB
|
lineage4.6.1.1
|
None
|
ERR6198394
|
Other
|
La1.2
|
None
|
ERR6201800
|
Other
|
La1.2
|
None
|
SRR1049569
|
Sensitive
|
lineage4.2.2.2
|
None
|
SRR10869203
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR13861533
|
Other
|
lineage4.9
|
None
|
SRR13861600
|
Other
|
lineage4.9
|
None
|
SRR13861617
|
Other
|
lineage4.9
|
None
|
SRR15316549
|
RR-TB
|
lineage4.4.2
|
None
|
SRR1791899
|
Sensitive
|
La1.8.1;lineage4.9
|
None
|
SRR18002967
|
HR-TB
|
lineage2.2.1
|
None
|
SRR3675509
|
Other
|
lineage4.9
|
None
|
SAMN02585982
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR10796596
|
Other
|
lineage4.9
|
None
|
ERR1023527
|
Other
|
lineage4.9.1
|
None
|
ERR323061
|
Sensitive
|
lineage4.9
|
None
|
SRR13861728
|
Other
|
lineage4.9
|
None
|
ERR171142
|
Other
|
lineage3.1.1;lineage4.9
|
None
|
ERR5987263
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR6149874
|
Other
|
La1.8.2
|
None
|
ERR1063847
|
Sensitive
|
lineage3.1.1
|
None
|
SRR1062920
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
ERR4829333
|
Other
|
lineage4
|
None
|
ERR2514430
|
Other
|
lineage3.1.2;lineage4.1.1.3.1
|
None
|
ERR10796593
|
Other
|
lineage4.3
|
None
|
ERR4816101
|
Other
|
lineage4.1.2.1
|
None
|
SRR11342698
|
RR-TB
|
lineage4.4.1.1
|
None
|
SRR6982011
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR10869074
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR2229358
|
Other
|
lineage4.8
|
None
|
SRR13861559
|
Other
|
lineage4.9
|
None
|
ERR4817189
|
Other
|
lineage4.7
|
None
|
ERR4813263
|
MDR-TB
|
lineage4.8
|
None
|
ERR978747
|
Other
|
lineage4.8
|
None
|
ERR2446433
|
Other
|
lineage4.1.2.1
|
None
|
SRR13861693
|
Other
|
lineage4.9
|
None
|
SRR13861397
|
HR-TB
|
lineage4.9
|
None
|
ERR10796631
|
Other
|
lineage4.3.4.2;lineage4.9
|
None
|
SRR1140927
|
Sensitive
|
lineage4.3.2.1
|
None
|
SRR1013636
|
Sensitive
|
lineage2.2.2;lineage4
|
None
|
ERR126597
|
HR-TB
|
lineage4.4.1.2
|
None
|
SRR1183080
|
Other
|
lineage4.9
|
None
|
ERR5758436
|
Other
|
lineage2.2.2
|
None
|
SRR1049564
|
HR-TB
|
lineage4.4.1.1;lineage4.6.1.2
|
None
|
SRR11342644
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR3619841
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18002935
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1173740
|
Other
|
lineage3;lineage4
|
None
|
ERR10796568
|
Other
|
lineage4.9
|
None
|
ERR4820075
|
Other
|
lineage4.1.2.1
|
None
|
SRR6982088
|
Other
|
lineage4.1.1.2
|
None
|
SRR18002964
|
Other
|
lineage2.2.1
|
None
|
SRR18002994
|
MDR-TB
|
lineage4.2.2
|
None
|
ERR4821679
|
Other
|
lineage4.3.3
|
None
|
SRR13861697
|
Other
|
lineage4.9
|
None
|
ERR10796553
|
Other
|
lineage4.9
|
None
|
ERR1034634
|
HR-TB
|
lineage4.9
|
None
|
SRR3725588
|
Sensitive
|
lineage4.9
|
None
|
ERR978734_ERR978733_ERR978735
|
RR-TB
|
lineage4.8
|
None
|
ERR8975044
|
Other
|
lineage4.1.1.2
|
None
|
ERR978746
|
RR-TB
|
lineage4.8
|
None
|
SRR1181270
|
Sensitive
|
lineage4.9
|
None
|
SRR13861411
|
Other
|
lineage4.9
|
None
|
SRR13861642
|
Other
|
lineage4.9
|
None
|
ERR9786164
|
RR-TB
|
lineage4.1.1.3
|
None
|
SRR13861268
|
Other
|
lineage4.9
|
None
|
ERR502485
|
Sensitive
|
lineage4.9
|
None
|
SRR13861329
|
Other
|
lineage4.9
|
None
|
SRR13861352
|
Other
|
lineage4.9
|
None
|
ERR4829359
|
Sensitive
|
lineage4.7
|
None
|
SRR13861691
|
Other
|
lineage4.9
|
None
|
ERR190332
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR13861207
|
Other
|
lineage4.9
|
None
|
ERR978726_ERR978727
|
RR-TB
|
lineage4.8
|
None
|
ERR4821488
|
Sensitive
|
lineage4.1.3
|
None
|
SRR13861318
|
Other
|
lineage4.9
|
None
|
SRR1062871
|
RR-TB
|
lineage4.3.4.2.1
|
None
|
SRR1196478
|
Other
|
lineage4.9
|
None
|
SRR6855917
|
Sensitive
|
lineage4.8
|
None
|
SRR18002998
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR473303
|
Sensitive
|
lineage4.9
|
None
|
ERR1034647
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SAMEA3501070
|
RR-TB
|
lineage4.8
|
None
|
ERR4814896
|
Other
|
lineage2.2.1.1
|
None
|
SRR5341469
|
HR-TB
|
lineage4.9
|
None
|
ERR4769537
|
Sensitive
|
lineage4.9
|
None
|
SRR13861735
|
Other
|
lineage4.9
|
None
|
ERR161201
|
Sensitive
|
lineage1.1.3.2
|
None
|
ERR473368
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR10796577
|
Other
|
lineage4.9
|
None
|
SRR6046442
|
Other
|
lineage3
|
None
|
SRR12199465
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR13861410
|
Other
|
lineage4.9
|
None
|
SRR13861361
|
Other
|
lineage4.9
|
None
|
SRR13861589
|
Other
|
lineage4.9
|
None
|
ERR987733
|
Other
|
lineage4.6.1.1
|
None
|
SAMEA3501067
|
RR-TB
|
lineage4.8
|
None
|
ERR4817069
|
RR-TB
|
|
None
|
SRR7070134
|
Other
|
lineage3.1.1
|
None
|
ERR978757
|
RR-TB
|
lineage4.8
|
None
|
ERR4819910
|
Sensitive
|
lineage4.9
|
None
|
SRR11342646
|
HR-TB
|
lineage3
|
None
|
ERR4821007
|
Other
|
lineage1.2.2.2
|
None
|
SRR1173281
|
Other
|
lineage3
|
None
|
SRR18003024
|
RR-TB
|
lineage2.2.1
|
None
|
SRR6982058
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6982102
|
Sensitive
|
lineage2.2.1
|
None
|
ERR1063882
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR12062533
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
ERR176464
|
Other
|
lineage3.1.1
|
None
|
ERR2229336
|
Other
|
lineage4.8
|
None
|
ERR502489
|
Sensitive
|
lineage4.9
|
None
|
SRR1180066
|
Sensitive
|
lineage4.9
|
None
|
SRR18003045
|
Other
|
lineage2.2.1
|
None
|
SRR19303907
|
Other
|
lineage4.8
|
None
|
SRR1181500
|
Sensitive
|
lineage4.9
|
None
|
SRR13861297
|
Other
|
lineage4.9
|
None
|
SRR13861481
|
Other
|
lineage4.9
|
None
|
SRR13861464
|
Other
|
lineage4.9
|
None
|
SRR13861322
|
Other
|
lineage4.9
|
None
|
SRR1175474
|
Other
|
lineage4.9
|
None
|
SRR13861394
|
Other
|
lineage4.9
|
None
|
ERR978760
|
RR-TB
|
lineage4.8
|
None
|
SRR13861164
|
Other
|
lineage4.9
|
None
|
SRR18003046
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1182919
|
Sensitive
|
lineage4.9
|
None
|
SRR1011450
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR10796617
|
Other
|
lineage4.3.4.1
|
None
|
ERR2510796
|
HR-TB
|
lineage4.3.4.2
|
it
|
ERR4772210
|
Other
|
La1.2
|
None
|
SRR12062542
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18003012
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6397815
|
Other
|
lineage4.4.1.1
|
None
|
SRR7070176
|
Other
|
lineage3
|
None
|
ERR502493
|
Sensitive
|
lineage4.9
|
None
|
SRR6982229
|
Sensitive
|
lineage2.2.1
|
None
|
SRR7131145
|
Other
|
lineage4.1.2.1
|
None
|
SRR5065527
|
Other
|
lineage2.2.1
|
None
|
SRR7131185
|
Other
|
lineage4.1.2.1
|
None
|
ERR6140667
|
Other
|
La1.8.2
|
None
|
SRR13861377
|
Other
|
lineage4.9
|
None
|
SRR13861446
|
Other
|
lineage4.9
|
None
|
SRR13861530
|
Other
|
lineage4.9
|
None
|
SRR13861634
|
Other
|
lineage4.9
|
None
|
SRR13861694
|
Other
|
lineage4.9
|
None
|
ERR439982
|
Sensitive
|
lineage5
|
None
|
SRR1019127
|
Other
|
lineage4.9
|
None
|
ERR779680
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR13861568
|
Other
|
lineage4.9
|
None
|
SRR13861219
|
Other
|
lineage4.9
|
None
|
ERR4769479
|
Other
|
La1.3
|
None
|
SRR1180243
|
MDR-TB
|
lineage4.2.1
|
None
|
SAMN02380982
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR2228859
|
Other
|
lineage4.8
|
None
|
ERR6149875
|
Other
|
La1.8.2
|
None
|
ERR3797062
|
RR-TB
|
lineage4.9
|
None
|
ERR1023509
|
Other
|
lineage4.9
|
None
|
SRR3725597
|
Sensitive
|
lineage4.9
|
None
|
SRR1181242
|
Sensitive
|
lineage4.1.2
|
None
|
SRR10614047
|
Sensitive
|
lineage4.9
|
None
|
SRR13861423
|
Other
|
lineage4.9
|
None
|
SRR13861515
|
Other
|
lineage4.9
|
None
|
ERR4820484
|
Sensitive
|
lineage4.8
|
None
|
ERR323055
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR13861158
|
Other
|
lineage4.9
|
None
|
SRR13861191
|
Other
|
lineage4.9
|
None
|
SRR13861285
|
Other
|
lineage4.9
|
None
|
SRR18002875
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR13861283
|
Other
|
lineage4.9
|
None
|
SRR1184329
|
Other
|
lineage4.9
|
None
|
SRR18002980
|
Other
|
lineage2.2.1
|
None
|
ERR2446248
|
Other
|
lineage3
|
nl
|
SRR18003032
|
Other
|
lineage2.2.1
|
None
|
ERR2514215
|
Other
|
lineage2.2.1
|
gb
|
SRR6152886
|
HR-TB
|
lineage3
|
None
|
SRR11342647
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR18002999
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13861236
|
Other
|
lineage4.9
|
None
|
SRR11342676
|
HR-TB
|
lineage4.6.2.2
|
None
|
SRR13861244
|
Other
|
lineage4.9
|
None
|
SRR13861246
|
Other
|
lineage4.9
|
None
|
SRR13861452
|
Other
|
lineage4.9
|
None
|
SRR13861461
|
Other
|
lineage4.9
|
None
|
ERR978735
|
Other
|
lineage4.8
|
None
|
SRR13861429
|
Other
|
lineage4.9
|
None
|
SAMN02053762
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR13861299
|
Other
|
lineage4.9
|
None
|
ERR1063873
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR13861639
|
Other
|
lineage4.9
|
None
|
ERR4817826
|
Other
|
lineage4.5
|
None
|
ERR1144989
|
Sensitive
|
lineage4.8
|
None
|
ERR4819383
|
RR-TB
|
lineage4.9
|
None
|
ERR502470
|
RR-TB
|
lineage4.9
|
None
|
SRR6397441
|
Other
|
lineage4.5
|
None
|
ERR4819119
|
HR-TB
|
lineage1.2.1.2.1
|
gb
|
SRR1184383
|
Other
|
lineage4.9
|
None
|
SRR1180669
|
Other
|
lineage4.9
|
None
|
SRR13861702
|
Other
|
lineage4.9
|
None
|
ERR9992879
|
XDR-TB
|
lineage4.3.3
|
None
|
SRR3725596
|
Sensitive
|
lineage4.9
|
None
|
SRR13861494
|
Other
|
lineage4.9
|
None
|
SRR7645972
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR6982053
|
Sensitive
|
lineage4.3.4.1;lineage4.9
|
None
|
SRR13861179
|
Other
|
lineage4.9
|
None
|
SRR7646014
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR13861516
|
Other
|
lineage4.9
|
None
|
SRR124451
|
Sensitive
|
lineage2.2.2
|
None
|
SRR6045621
|
Other
|
lineage4.1.1.3
|
None
|
SRR6982104
|
Sensitive
|
lineage2.2.1
|
None
|
SRR7131195
|
Other
|
lineage2.2.1
|
None
|
SRR3725589
|
Sensitive
|
lineage4.9
|
None
|
ERR4819863
|
RR-TB
|
lineage4.9
|
None
|
ERR978754
|
RR-TB
|
lineage4.8
|
None
|
ERR3324368
|
RR-TB
|
lineage1.1.2;lineage6.2.3
|
None
|
SRR7444098
|
Sensitive
|
lineage4.9
|
None
|
SRR11342664
|
MDR-TB
|
lineage2.2.2
|
None
|
ERR10796636
|
Other
|
lineage4.1.2.1
|
None
|
SRR11972274
|
RR-TB
|
lineage1.2.1.2.1
|
None
|
SRR13861718
|
Other
|
lineage4.9
|
None
|
SRR13861724
|
Other
|
lineage4.9
|
None
|
SRR13861162
|
Other
|
lineage4.9
|
None
|
SRR13861192
|
Other
|
lineage4.9
|
None
|
SRR13861400
|
Other
|
lineage4.9
|
None
|
SRR13861479
|
Other
|
lineage4.9
|
None
|
SRR13861545
|
Other
|
lineage4.9
|
None
|
SRR13861627
|
Other
|
lineage4.9
|
None
|
SRR13861556
|
Other
|
lineage4.9
|
None
|
SRR13861428
|
Other
|
lineage4.9
|
None
|
SRR18003023
|
Other
|
lineage2.2.1
|
None
|
SRR13861200
|
Other
|
lineage4.9
|
None
|
SRR1062859
|
Sensitive
|
lineage2.2.1
|
None
|
SRR7131216
|
Other
|
lineage4.1.2.1
|
None
|
SRR1182994
|
Sensitive
|
lineage4.1.2
|
None
|
SRR11349207
|
RR-TB
|
lineage2.2.1
|
None
|
ERR216950
|
Sensitive
|
lineage1.1.3.2
|
None
|
ERR3275996
|
HR-TB
|
lineage4.3.4.1
|
nl
|
ERR405209
|
Sensitive
|
La1.7;lineage4.9
|
None
|
SRR1049031
|
Sensitive
|
lineage4.9
|
None
|
ERR4818065
|
Other
|
lineage4.1.2.1
|
None
|
ERR2229337
|
Other
|
lineage4.8
|
None
|
SRR1175491
|
MDR-TB
|
lineage4.3.4.1
|
None
|
SAMN02350446
|
Sensitive
|
lineage2.2.1
|
None
|
SRR13423546
|
Other
|
lineage4.4.2
|
None
|
SRR13591410
|
Other
|
lineage4.9
|
None
|
SRR2101617
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR7755649
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR10796555
|
Other
|
lineage4.1.2.1
|
None
|
ERR10796629
|
Other
|
lineage4.1;lineage4.9
|
None
|
ERR978734
|
RR-TB
|
lineage4.8
|
None
|
SRR12634609
|
MDR-TB
|
lineage3.1.1
|
None
|
SRR13861258
|
Other
|
lineage4.9
|
None
|
SRR13861274
|
Other
|
lineage4.9
|
None
|
ERR4811101
|
Other
|
lineage4.4.2
|
None
|
ERR4814312
|
Other
|
lineage4
|
None
|
ERR6149876
|
Other
|
La1.8.2
|
None
|
ERR978694
|
Other
|
lineage4.8
|
None
|
SRR13861147
|
Other
|
lineage4.9
|
None
|
SRR13861309
|
Other
|
lineage4.9
|
None
|
SRR13861362
|
Other
|
lineage4.9
|
None
|
SRR13861304
|
Other
|
lineage4.9
|
None
|
SRR13861421
|
Other
|
lineage4.9
|
None
|
SRR13861426
|
Other
|
lineage4.9
|
None
|
SRR13861454
|
Other
|
lineage4.9
|
None
|
SRR13861465
|
Other
|
lineage4.9
|
None
|
SRR13861503
|
Other
|
lineage4.9
|
None
|
SRR13861521
|
Other
|
lineage4.9
|
None
|
SRR13861537
|
Other
|
lineage4.9
|
None
|
SRR13861653
|
Other
|
lineage4.9
|
None
|
SRR13861265
|
HR-TB
|
lineage4.9
|
None
|
SRR13861554
|
Other
|
lineage4.9
|
None
|
SRR13861608
|
Other
|
lineage4.9
|
None
|
SRR13861680
|
Other
|
lineage4.9
|
None
|
ERR216930
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR16278292
|
Other
|
La1.4
|
None
|
SRR17567952
|
Other
|
lineage4.4.1.2
|
None
|
SRR1181214
|
Other
|
lineage4.9
|
None
|
SRR1182904
|
Sensitive
|
lineage4.9
|
None
|
SRR6045002
|
RR-TB
|
lineage4.9
|
None
|
SRR6045909
|
Other
|
lineage4.8.1
|
None
|
SRR13861330
|
Other
|
lineage4.9
|
None
|
SRR13861457
|
Other
|
lineage4.9
|
None
|
SRR13861449
|
Other
|
lineage4.9
|
None
|
SRR13861569
|
Other
|
lineage4.9
|
None
|
SRR13861717
|
Other
|
lineage4.9
|
None
|
SRR21240029
|
Sensitive
|
lineage4.3.3
|
None
|
ERR867570
|
RR-TB
|
lineage4.9
|
None
|
ERR4187819
|
Sensitive
|
La1.8.1;lineage4
|
None
|
ERR502486
|
Sensitive
|
lineage4.9
|
None
|
SRR6982362
|
Sensitive
|
lineage4.3.2.1
|
None
|
SRR13861282
|
Other
|
lineage4.9
|
None
|
SRR13861325
|
Other
|
lineage4.9
|
None
|
SRR6152854
|
Other
|
lineage4.1.2.1
|
None
|
ERR2228888
|
Other
|
lineage4.8
|
None
|
ERR4769512
|
Sensitive
|
lineage4.9
|
None
|
ERR190388
|
Sensitive
|
lineage4.9
|
None
|
SRR1049677
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
SRR13861254
|
Other
|
lineage4.9
|
None
|
SRR13861389
|
Other
|
lineage4.9
|
None
|
ERR867572
|
Other
|
lineage4.9
|
None
|
SRR13861406
|
Other
|
lineage4.9
|
None
|
SRR13861416
|
Other
|
lineage4.9
|
None
|
SRR1173113
|
Other
|
lineage4.3;lineage4.9
|
None
|
ERR4815816
|
Other
|
lineage4.5
|
gb
|
ERR867523
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18003047
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR133816
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6044942
|
HR-TB
|
lineage4.9
|
None
|
SRR13861734
|
Other
|
lineage4.9
|
None
|
SRR13861161
|
Other
|
lineage4.9
|
None
|
ERR4820030
|
Other
|
lineage4.9
|
None
|
SRR3725592
|
Sensitive
|
lineage4.9
|
None
|
SRR3725599
|
Sensitive
|
lineage4.9
|
None
|
ERR473298
|
Sensitive
|
lineage4.6.2.2
|
None
|
SRR3725593
|
Sensitive
|
lineage4.9
|
None
|
SRR1180061
|
Other
|
lineage4.9
|
None
|
SRR6397575
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR7801178
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR4821127
|
HR-TB
|
lineage4.6.2.2
|
gb
|
SRR6397359
|
Sensitive
|
lineage4.3.2
|
ca
|
ERR3283032
|
Other
|
lineage4.9
|
None
|
ERR6201910
|
Other
|
La1.2
|
None
|
SRR6046359
|
Other
|
lineage4.7
|
None
|
ERR867541
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR502498
|
Sensitive
|
lineage4.9
|
None
|
SRR13861470
|
Other
|
lineage4.9
|
None
|
SRR13861248
|
Other
|
lineage4.9
|
None
|
SRR1013637
|
Sensitive
|
lineage2.2.2;lineage4
|
None
|
ERR502484
|
Sensitive
|
lineage4.9
|
None
|
SRR18002881
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2229366
|
Other
|
lineage4.8
|
None
|
SRR7645834
|
Other
|
lineage2.2.1
|
None
|
SRR13861491
|
Other
|
lineage4.9
|
None
|
SRR13861433
|
Other
|
lineage4.9
|
None
|
ERR3324373
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5311077
|
Other
|
La1.8.1
|
None
|
ERR3797074
|
Sensitive
|
lineage4.9
|
None
|
SRR6397548
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
ERR4828843
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR2228899
|
Other
|
lineage4.8
|
None
|
ERR3468488
|
Other
|
La1.8.1
|
None
|
ERR3797024
|
Sensitive
|
lineage4.9
|
None
|
ERR1034692
|
Other
|
lineage1.2.1.2.1
|
None
|
ERR2228900
|
Other
|
lineage4.8
|
None
|
ERR7801314
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR987757
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR6397642
|
Other
|
lineage4.4.1.1
|
None
|
SRR6397771
|
Other
|
lineage1.1.1.1
|
None
|
SRR7070571
|
Sensitive
|
lineage3
|
None
|
SRR13861462
|
Other
|
lineage4.9
|
None
|
ERR4817584
|
Other
|
lineage3;lineage4.9
|
None
|
SRR13861649
|
Other
|
lineage4.9
|
None
|
SRR5341417
|
HR-TB
|
lineage3
|
None
|
SRR13861278
|
Other
|
lineage4.9
|
None
|
SRR1180497
|
Sensitive
|
lineage4.9
|
None
|
SRR13861630
|
Other
|
lineage4.9
|
None
|
SRR13861403
|
Other
|
lineage4.9
|
None
|
SRR13861419
|
Other
|
lineage4.9
|
None
|
SRR13861499
|
Other
|
lineage4.9
|
None
|
SRR16156697
|
RR-TB
|
lineage2.2.1
|
None
|
ERR4769470
|
Sensitive
|
lineage4.9
|
None
|
ERR4769478
|
Other
|
La1.2
|
None
|
SRR1062928
|
Other
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR4817294
|
Other
|
lineage4.1.2
|
None
|
ERR751729
|
Other
|
lineage1.1.1
|
None
|
ERR4817941
|
Other
|
lineage4.8
|
gb
|
ERR702401
|
Sensitive
|
lineage6.2.1
|
gh
|
ERR1873549
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1915485
|
Other
|
La1.2.BCG
|
None
|
SRR13861696
|
Other
|
lineage4.9
|
None
|
ERR037504
|
Other
|
lineage4.9.1
|
None
|
ERR6201798
|
Other
|
La1.2
|
None
|
ERR6149868
|
Other
|
La1.8.2
|
None
|
SRR13861580
|
Other
|
lineage4.9
|
None
|
SRR1173185
|
Other
|
lineage4.9
|
None
|
SRR13861286
|
Other
|
lineage4.9
|
None
|
SRR1011488
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6982448
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
SRR7069074
|
Other
|
lineage3
|
None
|
ERR323048
|
Sensitive
|
lineage4.9
|
None
|
ERR10796598
|
Other
|
lineage4.9
|
None
|
ERR176631
|
Sensitive
|
lineage1.1.2;lineage4
|
None
|
ERR1873437
|
HR-TB
|
lineage2.2.2
|
None
|
ERR2510804
|
Other
|
lineage2.2.1
|
None
|
SRR13861496
|
Other
|
lineage4.9
|
None
|
SRR13861150
|
Other
|
lineage4.9
|
None
|
ERR473278
|
Sensitive
|
lineage4.9
|
None
|
ERR3283006
|
RR-TB
|
lineage4.9
|
None
|
SAMN02350409
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR9971168
|
Other
|
lineage4.3.2.1
|
None
|
SRR1792011
|
Other
|
La1.8.1
|
None
|
ERR10796566
|
Other
|
lineage4.9
|
None
|
SRR5341390
|
HR-TB
|
lineage1.1.2
|
None
|
SRR13861343
|
Other
|
lineage4.9
|
None
|
SAMEA3501052
|
RR-TB
|
lineage4.8
|
None
|
SRR19303899
|
Other
|
lineage3
|
None
|
SRR1172808
|
Other
|
lineage4.9
|
None
|
SRR1238557
|
Other
|
lineage4.9
|
None
|
SRR13861323
|
Other
|
lineage4.9
|
None
|
SAMEA3501046
|
RR-TB
|
lineage4.8
|
None
|
SAMN02350456
|
Sensitive
|
lineage4.3.2.1
|
None
|
ERR4821288
|
Other
|
lineage4.7
|
None
|
SRR7645971
|
Other
|
lineage2.2.1
|
None
|
SRR6982106
|
Sensitive
|
lineage4.8
|
None
|
ERR736822
|
Sensitive
|
lineage4.4.1.2
|
None
|
SRR1049559
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR10796635
|
Other
|
lineage4.8
|
None
|
SRR1173770
|
Other
|
lineage4.9
|
None
|
ERR4819093
|
Other
|
lineage4.3.3
|
None
|
ERR4819175
|
Other
|
lineage4.1.1.3
|
gb
|
ERR5917985
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10315603
|
MDR-TB
|
lineage4.8
|
None
|
SRR13861201
|
Other
|
lineage4.9
|
None
|
SRR13861213
|
Other
|
lineage4.9
|
None
|
SRR13861430
|
Other
|
lineage4.9
|
None
|
SRR13861431
|
Other
|
lineage4.9
|
None
|
SRR13861555
|
Other
|
lineage4.9
|
None
|
SRR13861641
|
Other
|
lineage4.9
|
None
|
SRR13861624
|
Other
|
lineage4.9
|
None
|
SRR5341365
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR11342671
|
RR-TB
|
lineage4.1.3
|
None
|
SRR11342673
|
RR-TB
|
lineage4.3.4.2
|
None
|
SRR17567917
|
RR-TB
|
lineage4.4.1.1
|
None
|
SRR18003002
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR017781
|
Other
|
lineage3
|
None
|
SRR6044925
|
Sensitive
|
lineage4.9
|
None
|
ERR10796599
|
Other
|
lineage4.8
|
None
|
ERR10796597
|
Other
|
lineage4.3.3
|
None
|
ERR1873561
|
XDR-TB
|
lineage2.2.2
|
None
|
SRR1049568
|
Sensitive
|
lineage4.2.2.2
|
None
|
SRR1049726
|
Other
|
lineage4.1.2.1;lineage4.4.1.1
|
None
|
SRR6397588
|
Other
|
lineage2.2.1
|
None
|
SRR6397727
|
Other
|
lineage4.2.1.1
|
None
|
ERR4818176
|
Other
|
lineage4.1.2.1
|
None
|
ERR6201843
|
Other
|
La1.2
|
None
|
ERR10796592
|
Other
|
lineage4.9
|
None
|
ERR10796627
|
Other
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR978727
|
Other
|
lineage4.8
|
None
|
SRR1049725
|
Other
|
lineage4.1.2.1;lineage4.4.1
|
None
|
SRR1140736
|
Other
|
lineage4.1.2.1
|
None
|
ERR108476
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR1873461
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR6397406
|
Other
|
lineage4.1.2.1
|
None
|
SRR6397568
|
Other
|
lineage4.1.1
|
None
|
SRR13861240
|
Other
|
lineage4.9
|
None
|
SRR13861314
|
Other
|
lineage4.9
|
None
|
ERR10796591
|
Other
|
lineage4.9
|
None
|
SRR18002930
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR212003
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR18002947
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMEA3501063
|
RR-TB
|
lineage4.8
|
None
|
SRR1173170
|
Other
|
lineage4.9
|
None
|
SRR1183345
|
Sensitive
|
lineage4.9
|
None
|
SRR12062493
|
Pre-XDR-TB
|
lineage4.4.2
|
None
|
SRR1182901
|
Other
|
lineage4.9
|
None
|
ERR10796560
|
Other
|
lineage4.9
|
None
|
SRR1183476
|
Sensitive
|
lineage4.9
|
None
|
SRR13861141
|
Other
|
lineage4.9
|
None
|
SRR13861159
|
Other
|
lineage4.9
|
None
|
SRR13861495
|
HR-TB
|
lineage4.9
|
None
|
SRR6982099
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR13861374
|
Other
|
lineage4.9
|
None
|
SRR13861440
|
Other
|
lineage4.9
|
None
|
SRR5065506
|
HR-TB
|
lineage1.1.1.1
|
None
|
SRR12882631
|
Other
|
lineage3.1.2.1
|
None
|
ERR1023494
|
Sensitive
|
lineage3
|
None
|
SRR13861714
|
Other
|
lineage4.9
|
None
|
ERR4808964
|
RR-TB
|
lineage2.2.1
|
None
|
ERR978733
|
RR-TB
|
lineage4.8
|
None
|
SRR6397721
|
Other
|
lineage4.2.1.1
|
None
|
SRR3105736
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR978755
|
RR-TB
|
lineage4.8
|
None
|
SRR1792247
|
Other
|
La1.7.1
|
None
|
ERR10796562
|
Other
|
lineage4.3.4.1
|
None
|
ERR502497
|
Sensitive
|
lineage4.9
|
None
|
ERR4822169
|
Other
|
lineage4.1.1.3
|
gb
|
ERR2228910
|
Other
|
lineage4.8
|
None
|
SRR13861369
|
Other
|
lineage4.9
|
None
|
ERR6052085
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR2027209
|
MDR-TB
|
lineage1.2.1.1
|
None
|
ERR867527
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR11342658
|
RR-TB
|
lineage4.1.2
|
None
|
SAMN02350450
|
Sensitive
|
lineage1.2.2.1
|
None
|
SRR10315558
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4809333
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR13861673
|
Other
|
lineage4.9
|
None
|
ERR036207
|
Other
|
lineage4.3;lineage4.9
|
None
|
ERR181881
|
Other
|
lineage3.1.1;lineage4.3.4.2.1
|
mw
|
ERR4814362
|
Other
|
lineage4.8
|
None
|
ERR3324351
|
HR-TB
|
lineage4.1.4
|
None
|
SRR13861531
|
Other
|
lineage4.9
|
None
|
ERR6149870
|
Other
|
La1.8.2
|
None
|
SRR19303820
|
RR-TB
|
lineage4.8
|
None
|
SRR21727760
|
Other
|
lineage2.2.1
|
None
|
SRR13861373
|
Other
|
lineage4.9
|
None
|
SRR14801325
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
SAMN02585942
|
Sensitive
|
lineage4.1.2
|
None
|
ERR4188021
|
Other
|
La1.8.1
|
None
|
SRR13861453
|
Other
|
lineage4.9
|
None
|
SRR1181085
|
Sensitive
|
lineage4.1.2
|
None
|
SRR13861353
|
Other
|
lineage4.9
|
None
|
SRR3675265
|
Other
|
lineage4
|
None
|
ERR10796640
|
Other
|
lineage4.1.2.1
|
None
|
ERR4818498
|
Other
|
lineage3.1.2.1
|
gb
|
ERR10796564
|
Other
|
lineage4.3.3
|
None
|
SRR7755655
|
Other
|
lineage4.1.2.1
|
None
|
SRR1183672
|
Sensitive
|
lineage4.9
|
None
|
SRR6982239
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR13861562
|
Other
|
lineage4.9
|
None
|
SRR13861572
|
Other
|
lineage4.9
|
None
|
SRR13861566
|
Other
|
lineage4.9
|
None
|
SRR1180982
|
Other
|
lineage2.2.1
|
None
|
SRR14801688
|
Sensitive
|
lineage4.3.3
|
None
|
ERR181864
|
Sensitive
|
lineage3.1.1
|
None
|
ERR6866241
|
Other
|
lineage4.3.2
|
None
|
ERR6201832
|
Other
|
La1.2
|
None
|
ERR7801175
|
HR-TB
|
lineage4.6.5
|
None
|
SRR7131123
|
Other
|
lineage4.8
|
None
|
ERR4821172
|
RR-TB
|
lineage4.9
|
None
|
ERR1034722
|
Other
|
lineage4.9
|
None
|
SRR2101691
|
Other
|
lineage2.2.1
|
None
|
SRR13861593
|
Other
|
lineage4.9
|
None
|
SRR7069835
|
Other
|
lineage2.2.1
|
None
|
ERR4188395
|
Sensitive
|
La1.8.1
|
None
|
ERR6198389
|
Other
|
La1.2
|
None
|
ERR502490
|
Sensitive
|
lineage4.9
|
None
|
ERR4815923
|
Sensitive
|
lineage4.8
|
None
|
ERR2228941
|
Other
|
lineage4.8
|
None
|
ERR978752
|
Other
|
lineage4.8
|
None
|
SRR1183617
|
Other
|
lineage4.9
|
None
|
SRR13861186
|
Other
|
lineage4.9
|
None
|
SRR12882768
|
RR-TB
|
lineage3.1.1
|
None
|
SRR6397551
|
Other
|
lineage4.1.1.3
|
None
|
SRR13861514
|
Other
|
lineage4.9
|
None
|
SRR13861586
|
Other
|
lineage4.9
|
None
|
SRR1196582
|
Other
|
lineage4.9
|
None
|
ERR176741
|
Other
|
lineage4.9
|
None
|
SRR13861294
|
Other
|
lineage4.9
|
None
|
ERR867569
|
Other
|
lineage4.9
|
None
|
SRR1181161
|
Other
|
lineage4.9
|
None
|
SRR13861487
|
Other
|
lineage4.9
|
None
|
SRR10869071
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4828879
|
HR-TB
|
lineage3
|
None
|
SRR13861422
|
Other
|
lineage4.9
|
None
|
ERR3275567
|
Other
|
lineage3
|
nl
|
SRR1180563
|
Sensitive
|
lineage4.9
|
None
|
SRR13861498
|
Other
|
lineage4.9
|
None
|
SRR6045613
|
Other
|
lineage3.1.3
|
None
|
SRR7755645
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4188375
|
Sensitive
|
lineage4.9
|
None
|
SRR7755688
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
SRR13861379
|
Other
|
lineage4.9
|
None
|
SRR10315579
|
Other
|
lineage2.2.1.1
|
None
|
SRR18002984
|
MDR-TB
|
lineage2.2.2
|
None
|
ERR978750_ERR978752_ERR978751
|
RR-TB
|
lineage4.8
|
None
|
ERR3797015
|
HR-TB
|
lineage4.9
|
None
|
SRR5341430
|
Other
|
lineage3
|
None
|
SRR1183718
|
Sensitive
|
lineage4.9
|
None
|
SRR13861174
|
Other
|
lineage4.9
|
None
|
SRR13861331
|
Other
|
lineage4.9
|
None
|
SRR11342651
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR10315751
|
MDR-TB
|
lineage4.8
|
None
|
ERR978755_ERR978756_ERR978754_ERR978757
|
RR-TB
|
lineage4.8
|
None
|
ERR4769525
|
Sensitive
|
lineage4.9
|
None
|
SRR13861497
|
HR-TB
|
lineage4.9
|
None
|
ERR10796563
|
Other
|
lineage4.3.3
|
None
|
ERR4818126
|
Other
|
lineage1.2.2
|
None
|
ERR161184
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR6982076
|
Sensitive
|
lineage4.9
|
None
|
ERR3797019
|
Other
|
La1.8.1
|
None
|
SRR11342660
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR19304104
|
Other
|
lineage4.8
|
None
|
ERR4819706
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR6397396
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
ERR978693
|
Other
|
lineage4.8
|
None
|
ERR4769429
|
Other
|
lineage4.9
|
None
|
SRR16156188
|
Sensitive
|
lineage4.9
|
None
|
SRR6982141
|
Other
|
lineage4.3.3
|
None
|
SRR3725595
|
Sensitive
|
lineage4.9
|
None
|
ERR072033
|
Sensitive
|
lineage3.1.2.2
|
None
|
ERR4769474
|
HR-TB
|
lineage4.9
|
None
|
SRR13861144
|
Other
|
lineage4.9
|
None
|
SRR7645901
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR190339
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR4798769
|
Other
|
lineage1.1.3.3
|
None
|
SRR13861523
|
Other
|
lineage4.9
|
None
|
ERR2512423
|
Other
|
lineage4.1.1.3
|
None
|
ERR4811035
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.5
|
None
|
ERR736820
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR5065440
|
Other
|
lineage2.2.1.2
|
None
|
SRR1175472
|
RR-TB
|
lineage4.3.4.1
|
None
|
SRR13861510
|
Other
|
lineage4.9
|
None
|
SRR13861637
|
Other
|
lineage4.9
|
None
|
SRR14782539
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR7645928
|
Other
|
lineage4.7
|
None
|
DRR184644
|
HR-TB
|
lineage2.2.1
|
None
|
SRR7068912
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18002874
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR13861392
|
Other
|
lineage4.9
|
None
|
SRR7131149
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR13861303
|
Other
|
lineage4.9
|
None
|
SRR7645906
|
Other
|
lineage2.2.1
|
None
|
ERR3283040
|
HR-TB
|
lineage4.9
|
None
|
SRR13861646
|
Other
|
lineage4.9
|
None
|
ERR2514801
|
Other
|
lineage1.1.3.2
|
gb
|
SRR6045138
|
Other
|
lineage3.1.1
|
None
|
ERR4819720
|
Other
|
lineage3.1.2.1
|
gb
|
ERR502492
|
Sensitive
|
lineage4.9
|
None
|
SRR6152979
|
Other
|
lineage4.7
|
None
|
SRR6397638
|
Other
|
lineage4.2.1.1
|
None
|
SRR6153036
|
Other
|
lineage1.2.1.2.1;lineage4.9
|
None
|
SRR13861390
|
Other
|
lineage4.9
|
None
|
SRR6046275
|
Other
|
lineage3.1.1;lineage4
|
None
|
SRR13861232
|
Other
|
lineage4.9
|
None
|
SRR13861156
|
Other
|
lineage4.9
|
None
|
SRR13861206
|
Other
|
lineage4.9
|
None
|
ERR4818646
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR1873560
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR7069922
|
Other
|
lineage2.2.1
|
None
|
SRR6981966
|
Other
|
lineage2.2.1
|
None
|
ERR978746_ERR978747_ERR978748
|
RR-TB
|
lineage4.8
|
None
|
SRR13861217
|
Other
|
lineage4.9
|
None
|
SRR7444074
|
Sensitive
|
lineage4.9
|
None
|
SRR1011492
|
Sensitive
|
lineage1.2.2.1
|
None
|
ERR4815079
|
RR-TB
|
lineage3
|
None
|
SRR13861626
|
Other
|
lineage4.9
|
None
|
SRR1172807
|
Sensitive
|
lineage4.9
|
None
|
ERR773806
|
Sensitive
|
lineage2.2.1
|
None
|
SRR13861727
|
Other
|
lineage4.9
|
None
|
ERR4816310
|
HR-TB
|
lineage4.6.1.2
|
None
|
SRR11342640
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR18003042
|
Other
|
lineage2.2.1
|
None
|
SRR13861307
|
Other
|
lineage4.9
|
None
|
SRR13861463
|
Other
|
lineage4.9
|
None
|
ERR736805
|
Sensitive
|
lineage2.2.1
|
None
|
SRR13861597
|
Other
|
lineage4.9
|
None
|
ERR176820
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR502481
|
RR-TB
|
lineage4.9
|
None
|
SAMN02350447
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR1173719
|
Other
|
lineage4.9
|
None
|
ERR6052110
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR4586795
|
Other
|
La1.8.1
|
None
|
SRR1140753
|
RR-TB
|
lineage4.3.4.2.1
|
None
|
ERR9119733
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1172717
|
Sensitive
|
lineage4.9
|
None
|
SRR11342669
|
Other
|
lineage4.8
|
None
|
SRR1180252
|
Other
|
lineage4.9
|
None
|
ERR978726
|
RR-TB
|
lineage4.8
|
None
|
ERR978756
|
Other
|
lineage4.8
|
None
|
SRR15316595
|
RR-TB
|
lineage4.4.2
|
None
|
SRR13861143
|
RR-TB
|
lineage4.9
|
None
|
SRR13861195
|
Other
|
lineage4.9
|
None
|
SRR13861227
|
Other
|
lineage4.9
|
None
|
SRR6389899
|
Other
|
lineage4.1.2
|
None
|
ERR161014
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR2101689
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR7645899
|
Other
|
lineage2.2.1
|
None
|
SRR6982014
|
Sensitive
|
lineage4.1.1
|
None
|
ERR323036
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR7801176
|
RR-TB
|
lineage4.6.5
|
None
|
SRR305201
|
Sensitive
|
lineage4.9
|
None
|
ERR4829208
|
Other
|
lineage4.8
|
None
|
SRR7131220
|
Other
|
lineage4.1.2.1
|
None
|
SRR5341288
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR18909918
|
Other
|
lineage2.2.1.1
|
None
|
SRR6982558
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR3618864
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6982400
|
Other
|
lineage2.2.1
|
None
|
ERR216901
|
Other
|
lineage3.1.1
|
None
|
ERR867538
|
Other
|
lineage4.2.2.2
|
None
|
SRR13861587
|
Other
|
lineage4.9
|
None
|
SRR13861182
|
Other
|
lineage4.9
|
None
|
SRR13861281
|
Other
|
lineage4.9
|
None
|
SRR3725591
|
Sensitive
|
lineage4.9
|
None
|
SRR13861142
|
Other
|
lineage4.9
|
None
|
SRR7070369
|
Other
|
lineage1.2.2.2
|
None
|
SRR16156832
|
RR-TB
|
lineage2.2;lineage4
|
None
|
SRR13861188
|
Other
|
lineage4.9
|
None
|
SRR13861264
|
HR-TB
|
lineage4.9
|
None
|
ERR4816031
|
Other
|
lineage4.3.3
|
gb
|
SRR18002963
|
Other
|
lineage2.2.1
|
None
|
SRR13861417
|
HR-TB
|
lineage4.9
|
None
|
ERR10796620
|
Other
|
lineage4.1.1.1
|
None
|
ERR176475
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR4423724
|
RR-TB
|
lineage3
|
None
|
ERR978761_ERR978762_ERR978760
|
RR-TB
|
lineage4.8
|
None
|
SRR7131121
|
Other
|
lineage4.3.3
|
None
|
ERR2228838
|
Other
|
lineage4.8
|
None
|
ERR1873401
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR13861175
|
Other
|
lineage4.9
|
None
|
SRR13861711
|
Other
|
lineage4.9
|
None
|
ERR176771
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SAMN02419540
|
Other
|
lineage2.2.1
|
None
|
SRR11342691
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11349188
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR1173717
|
MDR-TB
|
lineage4.6.1.1
|
None
|
SRR5818647
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR473346
|
Other
|
lineage1.1.3.2
|
None
|
SRR3675230
|
Other
|
lineage3;lineage4
|
None
|
SRR3725585
|
Sensitive
|
lineage4.9
|
None
|
SRR13861532
|
Other
|
lineage4.9
|
None
|
SRR13861692
|
Other
|
lineage4.9
|
None
|
ERR970449
|
RR-TB
|
lineage4.1.1.3
|
None
|
ERR10796615
|
Other
|
lineage4.3.3;lineage4.9
|
None
|
SRR2101681
|
Sensitive
|
lineage4.8
|
None
|
ERR4769549
|
Sensitive
|
lineage4.9
|
None
|
SRR5341460
|
Other
|
lineage3
|
None
|
SRR1062820
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13861157
|
Other
|
lineage4.9
|
None
|
SRR6982514
|
Sensitive
|
lineage4.3.3
|
None
|
SRR13861573
|
Other
|
lineage4.9
|
None
|
SRR13861504
|
Other
|
lineage4.9
|
None
|
ERR181749
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR1140691
|
HR-TB
|
lineage4.4.1.1;lineage4.6.1.2
|
None
|
SRR13861243
|
Other
|
lineage4.9
|
None
|
SRR13861280
|
Other
|
lineage4.9
|
None
|
ERR10796572
|
Other
|
lineage4.3.4.1;lineage4.9
|
None
|
ERR502473
|
RR-TB
|
lineage4.9
|
None
|
SRR6397770
|
Other
|
lineage4.7
|
None
|
SRR1062873
|
HR-TB
|
lineage4.4.1.1;lineage4.6.1.2
|
None
|
SRR11349145
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR2513405
|
Other
|
lineage2.2.1
|
None
|
SRR1173361
|
MDR-TB
|
lineage4.6.1.1
|
None
|
SRR12708406
|
HR-TB
|
lineage2.2.1;lineage4.9
|
None
|
SRR18002887
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR18002981
|
Other
|
lineage2.2.1
|
None
|
ERR4816133
|
Other
|
La1.8.2
|
None
|
SRR3725594
|
Sensitive
|
lineage4.9
|
None
|
ERR2228810
|
Other
|
lineage4.8;lineage4.9
|
None
|
SRR023487
|
RR-TB
|
lineage2.2.1
|
None
|
ERR4817915
|
Other
|
lineage4.9
|
None
|
SRR13861336
|
Other
|
lineage4.9
|
None
|
SRR13861384
|
Other
|
lineage4.9
|
None
|
SRR13861387
|
Other
|
lineage4.9
|
None
|
SRR13861476
|
Other
|
lineage4.9
|
None
|
SRR13861415
|
Other
|
lineage4.9
|
None
|
SRR13861607
|
Other
|
lineage4.9
|
None
|
SRR13861725
|
Other
|
lineage4.9
|
None
|
SRR13861668
|
Other
|
lineage4.9
|
None
|
SRR18003030
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR5065436
|
HR-TB
|
lineage2.2.1
|
None
|
SRR13861340
|
Other
|
lineage4.9
|
None
|
SRR13861420
|
Other
|
lineage4.9
|
None
|
SRR13861507
|
Other
|
lineage4.9
|
None
|
ERR978751
|
Other
|
lineage4.8
|
None
|
ERR10762495
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR161045
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR11342662
|
MDR-TB
|
lineage4.8.1
|
None
|
ERR4819699
|
HR-TB
|
lineage4.6.2.2
|
gb
|
ERR502472
|
Sensitive
|
lineage4.6.2.2
|
None
|
ERR163952
|
Sensitive
|
lineage1.1.3.2
|
None
|
ERR978750
|
RR-TB
|
lineage4.8
|
None
|
SRR6982385
|
Sensitive
|
lineage4.1.2
|
None
|
SRR13861443
|
Other
|
lineage4.9
|
None
|
SRR1049560
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR502483
|
Sensitive
|
lineage4.9
|
None
|
SRR1062860
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR7755657
|
Other
|
lineage4.8
|
None
|
SRR6397733
|
Other
|
lineage4.4.1.2
|
None
|
SRR18911000
|
Sensitive
|
lineage2.2.1
|
None
|
ERR216949
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR978761
|
Other
|
lineage4.8
|
None
|
SRR10993951
|
RR-TB
|
La1.6
|
None
|
SRR18003004
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR18002891
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2513382
|
RR-TB
|
lineage4.1.1.3
|
None
|
SRR5818395
|
Sensitive
|
lineage4.9
|
None
|
SRR11342684
|
HR-TB
|
lineage4.4.1.1
|
None
|
SRR1049676
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
ERR2229033
|
Other
|
lineage4.8
|
None
|
SRR1011489
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR1183237
|
Other
|
lineage4.9
|
None
|
SRR13861459
|
HR-TB
|
lineage4.9
|
None
|
SRR11342649
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR163988
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1140574
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
SRR13861180
|
Other
|
lineage4.9
|
None
|
SRR13861187
|
Other
|
lineage4.9
|
None
|
SRR13861720
|
Other
|
lineage4.9
|
None
|
SRR13861372
|
Other
|
lineage4.9
|
None
|
SRR13628039
|
Sensitive
|
lineage4.9
|
None
|
SRR1180237
|
Sensitive
|
lineage4.1.2
|
None
|
SRR6153042
|
Other
|
lineage4.4.1.1
|
None
|
SRR13861648
|
Other
|
lineage4.9
|
None
|
SRR21239778
|
Sensitive
|
lineage4.3.3
|
None
|
ERR502474
|
RR-TB
|
lineage4.9
|
None
|
SRR1049030
|
Sensitive
|
lineage4.9
|
None
|
ERR978694_ERR978693
|
Other
|
lineage4.8
|
None
|
SRR13861447
|
Other
|
lineage4.9
|
None
|
ERR4829816
|
RR-TB
|
lineage4.4.1.1
|
None
|
SRR1180830
|
Other
|
lineage4.9
|
None
|
SRR18002974
|
Other
|
lineage2.2.1
|
None
|
SRR1019130
|
Sensitive
|
lineage4.3.2.1
|
None
|
ERR1034638
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9117827
|
Other
|
lineage1.2.2.2
|
None
|
ERR10796628
|
Other
|
lineage4.3.3
|
None
|
SRR19612366
|
Other
|
lineage4.5
|
None
|
SRR13861324
|
Other
|
lineage4.9
|
None
|
SRR13861482
|
Other
|
lineage4.9
|
None
|
ERR5162090
|
RR-TB
|
lineage4.9
|
None
|
SRR13861438
|
Other
|
lineage4.9
|
None
|
SRR13861230
|
Other
|
lineage4.9
|
None
|
SRR13861231
|
Other
|
lineage4.9
|
None
|
SRR13861312
|
Other
|
lineage4.9
|
None
|
ERR181940
|
Sensitive
|
lineage3.1.1
|
None
|
SRR6397818
|
RR-TB
|
lineage4.4.1.1
|
None
|
SRR13861658
|
Other
|
lineage4.9
|
None
|
ERR2228874
|
Other
|
lineage4.8;lineage4.9
|
None
|
ERR176739
|
Sensitive
|
lineage4.4.1.1
|
None
|
ERR10796626
|
Other
|
lineage4.1.2.1
|
None
|
SRR6152986
|
Other
|
lineage2.2.1
|
None
|
ERR2513508
|
Sensitive
|
lineage3
|
gb
|
ERR1063890
|
Sensitive
|
lineage3.1.1
|
None
|
ERR10796571
|
Other
|
lineage4.9
|
None
|
ERR10796589
|
Other
|
lineage4.9
|
None
|
ERR3324347
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR10796634
|
Other
|
lineage4.7
|
None
|
SRR6397640
|
Other
|
lineage4.2.1.1
|
None
|
SRR11342687
|
RR-TB
|
lineage4.2.2.2
|
None
|
SRR13861383
|
Other
|
lineage4.9
|
None
|
ERR4872322
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13861651
|
Other
|
lineage4.9
|
None
|
SAMEA3501015
|
Other
|
lineage4.8
|
None
|
ERR3470682
|
Other
|
lineage3
|
None
|
ERR4820817
|
Other
|
lineage4.1.2.1
|
None
|
SRR13861683
|
Other
|
lineage4.9
|
None
|
ERR161125
|
Sensitive
|
lineage4
|
None
|
ERR10796581
|
Other
|
lineage4.1.2
|
None
|
SRR11342642
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR13861583
|
Other
|
lineage4.9
|
None
|
ERR3275941
|
RR-TB
|
lineage4.3
|
nl
|
SRR1181586
|
Sensitive
|
lineage4.9
|
None
|
SRR13861345
|
Other
|
lineage4.9
|
None
|
SRR13861468
|
Other
|
lineage4.9
|
None
|
SRR13861519
|
Other
|
lineage4.9
|
None
|
SRR13861522
|
Other
|
lineage4.9
|
None
|
SRR13861535
|
Other
|
lineage4.9
|
None
|
SRR13861486
|
Other
|
lineage4.9
|
None
|
SRR13861534
|
Other
|
lineage4.9
|
None
|
SRR3725590
|
Sensitive
|
lineage4.9
|
None
|
SRR7131147
|
Other
|
lineage4.1.2.1
|
None
|
ERR176780
|
Sensitive
|
lineage4.9
|
None
|
ERR4816692
|
Other
|
lineage4.1.2.1
|
None
|
ERR718268
|
Sensitive
|
lineage1.1.1
|
None
|
ERR6201802
|
Other
|
La1.2
|
None
|
ERR6201814
|
Other
|
La1.2
|
None
|
ERR978762
|
Other
|
lineage4.8
|
None
|
SAMEA3501065
|
RR-TB
|
lineage4.8
|
None
|
ERR176470
|
Other
|
lineage4.3.4.1
|
mw
|
SRR1173384
|
Other
|
lineage4.9
|
None
|
SRR13861631
|
Other
|
lineage4.9
|
None
|
SRR16627752
|
RR-TB
|
lineage4.4
|
None
|
ERR1063855
|
Other
|
lineage4.9
|
None
|
SRR13861598
|
Other
|
lineage4.9
|
None
|
SRR7645827
|
Other
|
lineage4.2.1.1
|
None
|
SRR1173706
|
Other
|
lineage4.9
|
None
|
SRR6982414
|
Sensitive
|
lineage4.9
|
None
|
ERR4831863
|
HR-TB
|
lineage2.2.1.1
|
None
|
ERR4817047
|
Sensitive
|
lineage4.2.2.1
|
gb
|
ERR405219
|
HR-TB
|
La1.7;lineage3.1;lineage4
|
None
|
SRR1062863
|
Sensitive
|
lineage1.2.2.1
|
None
|
SRR3675389
|
Other
|
lineage4.9
|
None
|
ERR4817555
|
Sensitive
|
lineage3
|
None
|
SAMN02380985
|
Sensitive
|
lineage4.2.2.2
|
None
|
ERR4816967
|
Other
|
lineage5
|
None
|
SRR13861579
|
Other
|
lineage4.9
|
None
|
SRR3675582
|
Other
|
lineage4.9
|
None
|
ERR4816198
|
Sensitive
|
lineage4.1.3
|
None
|
ERR502478
|
RR-TB
|
lineage4.9
|
None
|