Run ID: SRR13861646
Sample name:
Date: 03-04-2023 09:37:06
Number of reads: 584050
Percentage reads mapped: 29.23
Strain: lineage4.9
Drug-resistance: Other
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage4 | Euro-American | LAM;T;S;X;H | None | 0.98 |
lineage4.9 | Euro-American (H37Rv-like) | T1 | None | 1.0 |
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
gyrB | 5149 | c.-91G>C | upstream_gene_variant | 1.0 |
gyrA | 6925 | c.-377T>C | upstream_gene_variant | 0.19 |
gyrB | 7090 | p.Asp617Glu | missense_variant | 1.0 |
gyrA | 8048 | c.747C>T | synonymous_variant | 0.14 |
gyrA | 8057 | c.756A>G | synonymous_variant | 0.15 |
gyrA | 8156 | c.855T>C | synonymous_variant | 0.14 |
gyrA | 8264 | c.963T>C | synonymous_variant | 0.13 |
gyrA | 8366 | c.1065G>C | synonymous_variant | 0.18 |
gyrA | 8375 | c.1074G>C | synonymous_variant | 0.22 |
gyrA | 8391 | p.Tyr364His | missense_variant | 0.21 |
gyrA | 8399 | c.1098T>C | synonymous_variant | 0.22 |
gyrA | 8420 | c.1119T>C | synonymous_variant | 0.21 |
gyrA | 8423 | c.1122G>C | synonymous_variant | 0.2 |
gyrA | 8436 | p.Tyr379Asn | missense_variant | 0.79 |
gyrA | 8442 | c.1141C>T | synonymous_variant | 0.21 |
gyrA | 8453 | c.1152A>C | synonymous_variant | 0.21 |
gyrA | 8462 | c.1161A>G | synonymous_variant | 0.22 |
gyrA | 8471 | c.1170T>C | synonymous_variant | 0.22 |
gyrA | 8480 | c.1179C>T | synonymous_variant | 0.22 |
gyrA | 8486 | c.1185T>C | synonymous_variant | 0.21 |
gyrA | 8489 | c.1188A>G | synonymous_variant | 0.21 |
gyrA | 8498 | c.1197C>T | synonymous_variant | 0.19 |
gyrA | 8504 | c.1203G>C | synonymous_variant | 0.21 |
gyrA | 8516 | c.1215T>C | synonymous_variant | 0.29 |
gyrA | 8519 | c.1218A>C | synonymous_variant | 0.29 |
gyrA | 8537 | c.1236G>A | synonymous_variant | 0.25 |
gyrA | 8546 | c.1245T>C | synonymous_variant | 0.24 |
gyrA | 8552 | c.1251C>G | synonymous_variant | 0.22 |
gyrA | 8556 | p.Ala419Gln | missense_variant | 0.22 |
gyrA | 8561 | c.1260A>C | synonymous_variant | 0.23 |
gyrA | 8562 | c.1261C>T | synonymous_variant | 0.22 |
gyrA | 8597 | c.1296C>G | synonymous_variant | 0.17 |
gyrA | 8603 | c.1302A>G | synonymous_variant | 0.18 |
gyrA | 8619 | c.1318T>C | synonymous_variant | 0.17 |
gyrA | 8624 | c.1323G>C | synonymous_variant | 0.18 |
gyrA | 8627 | c.1326C>G | synonymous_variant | 0.17 |
gyrA | 8645 | c.1344C>G | synonymous_variant | 0.14 |
fgd1 | 491701 | p.His307Asn | missense_variant | 1.0 |
mshA | 575767 | c.420G>A | synonymous_variant | 0.14 |
mshA | 575771 | p.Val142Ser | missense_variant | 0.15 |
mshA | 576154 | c.807C>G | synonymous_variant | 0.14 |
mshA | 576163 | c.816A>C | synonymous_variant | 0.2 |
mshA | 576184 | c.837A>C | synonymous_variant | 0.18 |
mshA | 576193 | c.846T>C | synonymous_variant | 0.17 |
mshA | 576196 | c.849G>C | synonymous_variant | 0.17 |
mshA | 576197 | c.850C>T | synonymous_variant | 0.17 |
mshA | 576205 | c.858G>C | synonymous_variant | 0.17 |
mshA | 576211 | c.864C>G | synonymous_variant | 0.18 |
mshA | 576215 | c.868T>C | synonymous_variant | 0.17 |
mshA | 576233 | p.Ile296Val | missense_variant | 0.16 |
mshA | 576247 | c.900A>G | synonymous_variant | 0.15 |
mshA | 576258 | p.Ser304Thr | missense_variant | 0.16 |
mshA | 576262 | c.915T>C | synonymous_variant | 0.17 |
mshA | 576268 | c.921T>C | synonymous_variant | 0.16 |
mshA | 576271 | c.924A>G | synonymous_variant | 0.16 |
mshA | 576281 | c.934C>T | synonymous_variant | 0.17 |
mshA | 576285 | p.Val313Ala | missense_variant | 0.18 |
mshA | 576292 | c.945C>G | synonymous_variant | 0.17 |
ccsA | 619765 | c.-126G>A | upstream_gene_variant | 1.0 |
rpoB | 760475 | c.669A>G | synonymous_variant | 0.16 |
rpoB | 760481 | c.675G>C | synonymous_variant | 0.17 |
rpoB | 761459 | c.1653G>C | synonymous_variant | 0.13 |
rpoB | 761462 | c.1656C>G | synonymous_variant | 0.14 |
rpoB | 761492 | c.1686G>C | synonymous_variant | 0.24 |
rpoB | 761510 | c.1704T>C | synonymous_variant | 0.21 |
rpoB | 761531 | c.1725C>G | synonymous_variant | 0.25 |
rpoB | 761534 | c.1728G>A | synonymous_variant | 0.25 |
rpoB | 761537 | c.1731C>G | synonymous_variant | 0.25 |
rpoB | 761570 | c.1764T>C | synonymous_variant | 0.25 |
rpoB | 761573 | c.1767C>G | synonymous_variant | 0.25 |
rpoB | 761579 | c.1773G>C | synonymous_variant | 0.25 |
rpoB | 761606 | c.1800C>G | synonymous_variant | 0.2 |
rpoB | 761612 | c.1806G>C | synonymous_variant | 0.15 |
rpoB | 761636 | c.1830G>T | synonymous_variant | 0.19 |
rpoB | 761645 | c.1839C>G | synonymous_variant | 0.14 |
rpoB | 761648 | c.1842T>C | synonymous_variant | 0.14 |
rpoB | 761687 | c.1881C>T | synonymous_variant | 0.14 |
rpoB | 761690 | c.1884G>C | synonymous_variant | 0.15 |
rpoB | 761732 | c.1926C>G | synonymous_variant | 0.15 |
rpoB | 761747 | c.1941G>C | synonymous_variant | 0.19 |
rpoB | 761750 | c.1944G>C | synonymous_variant | 0.19 |
rpoB | 761765 | c.1959T>C | synonymous_variant | 0.19 |
rpoB | 761999 | c.2193G>C | synonymous_variant | 0.17 |
rpoB | 762008 | c.2202C>G | synonymous_variant | 0.17 |
rpoB | 762014 | c.2208C>T | synonymous_variant | 0.17 |
rpoB | 762017 | c.2211A>G | synonymous_variant | 0.17 |
rpoB | 762027 | c.2221_2223delCTCinsTTG | synonymous_variant | 0.18 |
rpoB | 762032 | c.2226C>G | synonymous_variant | 0.19 |
rpoB | 762035 | c.2229G>C | synonymous_variant | 0.19 |
rpoB | 762053 | c.2247T>C | synonymous_variant | 0.18 |
rpoB | 762062 | c.2256T>C | synonymous_variant | 0.19 |
rpoB | 762065 | c.2259T>C | synonymous_variant | 0.18 |
rpoB | 762086 | c.2280G>C | synonymous_variant | 0.16 |
rpoB | 762101 | c.2295C>G | synonymous_variant | 0.23 |
rpoB | 762114 | p.Ile770Val | missense_variant | 0.23 |
rpoB | 762131 | c.2325C>G | synonymous_variant | 0.15 |
rpoB | 762143 | c.2337T>C | synonymous_variant | 0.19 |
rpoB | 762149 | c.2343G>C | synonymous_variant | 0.2 |
rpoB | 762167 | c.2361T>C | synonymous_variant | 0.19 |
rpoB | 762176 | c.2370T>C | synonymous_variant | 0.21 |
rpoB | 762185 | c.2379G>C | synonymous_variant | 0.25 |
rpoB | 762218 | c.2412T>G | synonymous_variant | 0.25 |
rpoB | 762254 | c.2448T>C | synonymous_variant | 0.23 |
rpoB | 762266 | c.2460T>C | synonymous_variant | 0.21 |
rpoB | 762284 | c.2478G>C | synonymous_variant | 0.15 |
rpoB | 762329 | c.2523G>C | synonymous_variant | 0.18 |
rpoB | 762362 | p.Glu852Asp | missense_variant | 0.21 |
rpoB | 762369 | c.2563T>C | synonymous_variant | 0.24 |
rpoC | 762374 | c.-996G>C | upstream_gene_variant | 0.24 |
rpoC | 762380 | c.-990T>G | upstream_gene_variant | 0.24 |
rpoC | 762395 | c.-975G>C | upstream_gene_variant | 0.24 |
rpoC | 762398 | c.-972T>C | upstream_gene_variant | 0.24 |
rpoC | 762401 | c.-969G>C | upstream_gene_variant | 0.24 |
rpoC | 762404 | c.-966T>C | upstream_gene_variant | 0.24 |
rpoC | 762410 | c.-960T>C | upstream_gene_variant | 0.25 |
rpoC | 762416 | c.-954A>G | upstream_gene_variant | 0.25 |
rpoC | 762443 | c.-927G>C | upstream_gene_variant | 0.31 |
rpoC | 762470 | c.-900G>C | upstream_gene_variant | 0.36 |
rpoB | 762489 | p.Val895Gln | missense_variant | 0.27 |
rpoC | 762509 | c.-861T>A | upstream_gene_variant | 0.15 |
rpoB | 762510 | p.Ala902Pro | missense_variant | 0.15 |
rpoC | 762521 | c.-849C>G | upstream_gene_variant | 0.18 |
rpoC | 763723 | c.354G>C | synonymous_variant | 0.15 |
rpoC | 763732 | c.363C>G | synonymous_variant | 0.16 |
rpoC | 763735 | c.366G>C | synonymous_variant | 0.17 |
rpoC | 763744 | c.375G>C | synonymous_variant | 0.17 |
rpoC | 763765 | c.396T>C | synonymous_variant | 0.17 |
rpoC | 763768 | c.399C>G | synonymous_variant | 0.18 |
rpoC | 763780 | c.411C>G | synonymous_variant | 0.19 |
rpoC | 763783 | c.414G>C | synonymous_variant | 0.19 |
rpoC | 763801 | c.432C>G | synonymous_variant | 0.22 |
rpoC | 763807 | c.438T>C | synonymous_variant | 0.22 |
rpoC | 763819 | c.450G>C | synonymous_variant | 0.26 |
rpoC | 763831 | c.462A>G | synonymous_variant | 0.22 |
rpoC | 763835 | p.Ala156Met | missense_variant | 0.25 |
rpoC | 763858 | c.489A>G | synonymous_variant | 0.22 |
rpoC | 763872 | p.Gly168Ala | missense_variant | 0.14 |
rpoC | 763876 | p.Glu169Asp | missense_variant | 0.14 |
rpoC | 763879 | c.510A>G | synonymous_variant | 0.2 |
rpoC | 763888 | c.519G>C | synonymous_variant | 0.2 |
rpoC | 763891 | c.522G>C | synonymous_variant | 0.2 |
rpoC | 763894 | c.525A>G | synonymous_variant | 0.19 |
rpoC | 763919 | c.550C>T | synonymous_variant | 0.13 |
rpoC | 763933 | c.564C>T | synonymous_variant | 0.19 |
rpoC | 763945 | c.576T>C | synonymous_variant | 0.24 |
rpoC | 763960 | c.591T>C | synonymous_variant | 0.17 |
rpoC | 763967 | p.Gly200Ser | missense_variant | 0.15 |
rpoC | 763978 | c.609C>G | synonymous_variant | 0.15 |
rpoC | 763996 | c.627T>C | synonymous_variant | 0.21 |
rpoC | 764005 | c.636G>C | synonymous_variant | 0.24 |
rpoC | 764011 | c.642T>C | synonymous_variant | 0.24 |
rpoC | 764024 | c.655T>C | synonymous_variant | 0.24 |
rpoC | 764040 | p.Ser224Asn | missense_variant | 0.2 |
rpoC | 764044 | c.675T>C | synonymous_variant | 0.21 |
rpoC | 764059 | c.690G>C | synonymous_variant | 0.21 |
rpoC | 764083 | c.714A>G | synonymous_variant | 0.14 |
rpoC | 764131 | c.762T>C | synonymous_variant | 0.14 |
rpoC | 764196 | p.Ser276* | stop_gained | 0.14 |
rpoC | 764203 | c.834G>T | synonymous_variant | 0.14 |
rpoC | 764257 | c.888G>C | synonymous_variant | 0.25 |
rpoC | 764266 | c.897T>C | synonymous_variant | 0.23 |
rpoC | 764269 | c.900G>C | synonymous_variant | 0.14 |
rpoC | 764282 | c.913_915delTCGinsAGC | synonymous_variant | 0.15 |
rpoC | 764320 | c.951C>G | synonymous_variant | 0.14 |
rpoC | 764365 | c.996C>T | synonymous_variant | 0.17 |
rpoC | 764380 | c.1011G>C | synonymous_variant | 0.18 |
rpoC | 764381 | c.1012_1013delTCinsAG | synonymous_variant | 0.18 |
rpoC | 764387 | c.1018_1020delTTGinsCTC | synonymous_variant | 0.17 |
rpoC | 764405 | c.1036A>C | synonymous_variant | 0.14 |
rpoC | 764431 | c.1062G>C | synonymous_variant | 0.14 |
rpoC | 764446 | c.1077T>C | synonymous_variant | 0.15 |
rpoC | 764449 | c.1080G>C | synonymous_variant | 0.16 |
rpoC | 764455 | c.1086G>C | synonymous_variant | 0.16 |
rpoC | 764458 | c.1089G>C | synonymous_variant | 0.17 |
rpoC | 764461 | c.1092A>G | synonymous_variant | 0.18 |
rpoC | 764714 | c.1345C>T | synonymous_variant | 0.15 |
rpoC | 764720 | c.1351C>T | synonymous_variant | 0.17 |
rpoC | 764752 | c.1383G>C | synonymous_variant | 0.2 |
rpoC | 764791 | c.1422C>G | synonymous_variant | 0.17 |
rpoC | 764809 | c.1440C>T | synonymous_variant | 0.19 |
rpoC | 764812 | c.1443C>G | synonymous_variant | 0.18 |
rpoC | 764815 | c.1446A>G | synonymous_variant | 0.18 |
rpoC | 764824 | c.1455T>C | synonymous_variant | 0.17 |
rpoC | 764830 | c.1461C>G | synonymous_variant | 0.18 |
rpoC | 764858 | c.1489T>C | synonymous_variant | 0.25 |
rpoC | 764872 | c.1503A>G | synonymous_variant | 0.24 |
rpoC | 764893 | c.1524T>C | synonymous_variant | 0.24 |
rpoC | 764911 | c.1542A>G | synonymous_variant | 0.18 |
rpoC | 764923 | c.1554A>G | synonymous_variant | 0.21 |
rpoC | 764932 | c.1563C>A | synonymous_variant | 0.19 |
rpoC | 764968 | c.1599T>C | synonymous_variant | 0.17 |
rpoC | 764995 | c.1626C>G | synonymous_variant | 0.15 |
rpoC | 765103 | c.1734G>A | synonymous_variant | 0.12 |
rpoC | 765451 | c.2082C>G | synonymous_variant | 0.2 |
rpoC | 765452 | p.Ala695Ser | missense_variant | 0.2 |
rpoC | 765478 | c.2109T>C | synonymous_variant | 0.23 |
rpoC | 765499 | c.2130C>G | synonymous_variant | 0.22 |
rpoC | 765508 | c.2139C>G | synonymous_variant | 0.22 |
rpoC | 765541 | c.2172C>G | synonymous_variant | 0.23 |
rpoC | 765553 | c.2184C>T | synonymous_variant | 0.23 |
rpoC | 765556 | c.2187G>C | synonymous_variant | 0.27 |
rpoC | 765559 | c.2190G>C | synonymous_variant | 0.23 |
rpoC | 765578 | c.2209C>T | synonymous_variant | 0.23 |
rpoC | 765583 | c.2214G>T | synonymous_variant | 0.21 |
rpoC | 765613 | p.His748Gln | missense_variant | 0.21 |
rpoC | 765625 | c.2256C>G | synonymous_variant | 0.22 |
rpoC | 765628 | c.2259G>C | synonymous_variant | 0.27 |
rpoC | 765631 | p.Asp754Glu | missense_variant | 0.23 |
rpoC | 765658 | c.2289C>T | synonymous_variant | 0.24 |
rpoC | 765700 | c.2331T>C | synonymous_variant | 0.26 |
rpoC | 765734 | c.2365T>C | synonymous_variant | 0.24 |
rpoC | 765739 | c.2370G>C | synonymous_variant | 0.24 |
rpoC | 765751 | c.2382C>G | synonymous_variant | 0.16 |
rpoC | 765753 | p.Asp795Ala | missense_variant | 0.24 |
rpoC | 765772 | c.2403C>G | synonymous_variant | 0.26 |
rpoC | 765784 | c.2415C>G | synonymous_variant | 0.26 |
rpoC | 765796 | c.2427C>T | synonymous_variant | 0.2 |
rpoC | 765811 | c.2442T>C | synonymous_variant | 0.24 |
rpoC | 765814 | c.2445A>G | synonymous_variant | 0.24 |
rpoC | 765826 | c.2457T>C | synonymous_variant | 0.26 |
rpoC | 765835 | c.2466C>T | synonymous_variant | 0.26 |
rpoC | 765883 | c.2514C>G | synonymous_variant | 0.19 |
rpoC | 765886 | c.2517C>G | synonymous_variant | 0.22 |
rpoC | 765892 | c.2523T>C | synonymous_variant | 0.23 |
rpoC | 765928 | c.2559C>G | synonymous_variant | 0.21 |
rpoC | 765970 | c.2601C>T | synonymous_variant | 0.14 |
rpoC | 765979 | c.2610C>G | synonymous_variant | 0.14 |
rpoC | 766010 | p.Ser881Thr | missense_variant | 0.13 |
rpoC | 766043 | p.Gln892Glu | missense_variant | 0.2 |
rpoC | 766054 | c.2685C>G | synonymous_variant | 0.2 |
rpoC | 766082 | p.Ala905Gln | missense_variant | 0.15 |
rpoC | 766105 | c.2736C>T | synonymous_variant | 0.15 |
rpoC | 766129 | c.2760C>G | synonymous_variant | 0.14 |
rpoC | 766135 | c.2766G>A | synonymous_variant | 0.15 |
rpoC | 766390 | c.3021C>T | synonymous_variant | 0.15 |
rpoC | 766426 | c.3057C>T | synonymous_variant | 0.14 |
rpoC | 766630 | c.3261G>C | synonymous_variant | 0.17 |
rpoC | 766645 | c.3276A>G | synonymous_variant | 0.18 |
rpoC | 766672 | c.3303T>C | synonymous_variant | 0.17 |
rpoC | 766726 | c.3357T>C | synonymous_variant | 0.17 |
rpoC | 766738 | c.3369G>T | synonymous_variant | 0.18 |
rpoC | 766750 | c.3381C>G | synonymous_variant | 0.18 |
rpoC | 766765 | c.3396A>C | synonymous_variant | 0.14 |
rpoC | 766801 | c.3432C>A | synonymous_variant | 0.22 |
rpoC | 766804 | c.3435A>G | synonymous_variant | 0.22 |
rpoC | 766843 | c.3474T>C | synonymous_variant | 0.16 |
rpoC | 766894 | c.3525T>C | synonymous_variant | 0.16 |
rpoC | 766900 | c.3531T>C | synonymous_variant | 0.16 |
rpoC | 766996 | c.3627C>T | synonymous_variant | 0.19 |
rpoC | 767009 | c.3640_3642delTCGinsAGC | synonymous_variant | 0.21 |
rpoC | 767014 | c.3645G>C | synonymous_variant | 0.21 |
rpoC | 767033 | c.3664_3666delTCGinsAGT | synonymous_variant | 0.21 |
rpoC | 767059 | c.3690T>G | synonymous_variant | 0.17 |
rpoC | 767062 | c.3693C>A | synonymous_variant | 0.17 |
rpoC | 767074 | c.3705T>C | synonymous_variant | 0.16 |
rpoC | 767098 | c.3729T>C | synonymous_variant | 0.19 |
rpoC | 767119 | c.3750A>G | synonymous_variant | 0.21 |
rpoC | 767134 | c.3765C>G | synonymous_variant | 0.14 |
rpoC | 767158 | c.3789T>C | synonymous_variant | 0.15 |
rpoC | 767167 | c.3798C>G | synonymous_variant | 0.14 |
rpoC | 767181 | p.Ala1271Glu | missense_variant | 0.14 |
rpoC | 767191 | c.3822C>G | synonymous_variant | 0.15 |
rpoC | 767209 | c.3840T>C | synonymous_variant | 0.15 |
rpoC | 767212 | c.3843G>C | synonymous_variant | 0.15 |
rpoC | 767221 | c.3852C>G | synonymous_variant | 0.15 |
rpoC | 767230 | c.3861G>C | synonymous_variant | 0.17 |
rpoC | 767233 | c.3864T>C | synonymous_variant | 0.2 |
mmpL5 | 775867 | p.Arg872Gly | missense_variant | 1.0 |
mmpL5 | 776710 | p.Cys591Ser | missense_variant | 1.0 |
mmpL5 | 777625 | p.Gln286Lys | missense_variant | 1.0 |
mmpS5 | 778811 | p.Phe32Ser | missense_variant | 1.0 |
rplC | 800955 | c.147C>G | synonymous_variant | 0.14 |
rplC | 800967 | c.159C>G | synonymous_variant | 0.14 |
rplC | 800970 | c.162T>C | synonymous_variant | 0.14 |
rplC | 801246 | c.438C>G | synonymous_variant | 0.16 |
rplC | 801249 | c.441T>G | synonymous_variant | 0.16 |
rplC | 801255 | c.447C>T | synonymous_variant | 0.15 |
rplC | 801267 | c.459A>C | synonymous_variant | 0.18 |
rplC | 801270 | c.462T>C | synonymous_variant | 0.19 |
rplC | 801276 | c.468G>C | synonymous_variant | 0.18 |
rplC | 801279 | c.471G>C | synonymous_variant | 0.18 |
rplC | 801282 | c.474G>C | synonymous_variant | 0.19 |
rplC | 801301 | c.493C>A | synonymous_variant | 0.17 |
fbiC | 1303755 | c.825T>C | synonymous_variant | 0.18 |
fbiC | 1303785 | c.855G>C | synonymous_variant | 0.17 |
fbiC | 1303789 | p.Ile287Val | missense_variant | 0.17 |
fbiC | 1303818 | c.888C>G | synonymous_variant | 0.15 |
fbiC | 1303836 | c.906G>C | synonymous_variant | 0.19 |
fbiC | 1303845 | c.915C>G | synonymous_variant | 0.19 |
fbiC | 1303846 | p.Phe306Val | missense_variant | 0.19 |
fbiC | 1303854 | c.924T>C | synonymous_variant | 0.23 |
fbiC | 1303860 | c.930A>C | synonymous_variant | 0.22 |
fbiC | 1303881 | c.951G>C | synonymous_variant | 0.23 |
fbiC | 1303884 | c.954T>G | synonymous_variant | 0.22 |
fbiC | 1303911 | c.981G>C | synonymous_variant | 0.26 |
fbiC | 1303914 | c.984C>G | synonymous_variant | 0.26 |
fbiC | 1303920 | c.990C>G | synonymous_variant | 0.26 |
fbiC | 1303923 | c.993C>T | synonymous_variant | 0.26 |
fbiC | 1303929 | c.999G>C | synonymous_variant | 0.26 |
fbiC | 1303947 | c.1017T>C | synonymous_variant | 0.27 |
fbiC | 1303948 | p.Gly340Arg | missense_variant | 0.27 |
fbiC | 1303969 | p.Val347Ile | missense_variant | 0.28 |
fbiC | 1303973 | p.Gly348Ala | missense_variant | 0.32 |
fbiC | 1303995 | c.1065C>T | synonymous_variant | 0.26 |
fbiC | 1304001 | c.1071C>G | synonymous_variant | 0.3 |
fbiC | 1304008 | c.1078T>C | synonymous_variant | 0.25 |
fbiC | 1304034 | c.1104A>G | synonymous_variant | 0.25 |
fbiC | 1304040 | c.1110C>G | synonymous_variant | 0.17 |
fbiC | 1304046 | c.1116C>G | synonymous_variant | 0.17 |
fbiC | 1304049 | c.1119T>G | synonymous_variant | 0.17 |
fbiC | 1304058 | c.1128G>A | synonymous_variant | 0.16 |
fbiC | 1304064 | c.1134G>C | synonymous_variant | 0.16 |
fbiC | 1304067 | c.1137G>C | synonymous_variant | 0.17 |
fbiC | 1304073 | c.1143C>T | synonymous_variant | 0.18 |
fbiC | 1304080 | p.Ala384Ser | missense_variant | 0.17 |
fbiC | 1304092 | p.Met388Leu | missense_variant | 0.18 |
fbiC | 1304097 | c.1167G>C | synonymous_variant | 0.17 |
fbiC | 1304115 | c.1185A>G | synonymous_variant | 0.18 |
fbiC | 1304127 | c.1197A>G | synonymous_variant | 0.12 |
fbiC | 1304517 | c.1587C>T | synonymous_variant | 0.18 |
fbiC | 1304520 | c.1590A>C | synonymous_variant | 0.18 |
fbiC | 1304523 | c.1593G>T | synonymous_variant | 0.18 |
fbiC | 1304526 | c.1596T>G | synonymous_variant | 0.24 |
fbiC | 1304544 | c.1614T>C | synonymous_variant | 0.22 |
fbiC | 1304545 | p.Val539Thr | missense_variant | 0.22 |
fbiC | 1304559 | p.Glu543Asp | missense_variant | 0.21 |
fbiC | 1304565 | c.1635C>G | synonymous_variant | 0.22 |
fbiC | 1304568 | c.1638T>C | synonymous_variant | 0.24 |
fbiC | 1304574 | c.1644C>G | synonymous_variant | 0.29 |
fbiC | 1304580 | c.1650T>C | synonymous_variant | 0.29 |
fbiC | 1304628 | c.1698G>C | synonymous_variant | 0.27 |
fbiC | 1304634 | c.1704C>G | synonymous_variant | 0.27 |
fbiC | 1304640 | c.1710A>C | synonymous_variant | 0.29 |
fbiC | 1304646 | c.1716T>C | synonymous_variant | 0.29 |
fbiC | 1304658 | c.1728C>G | synonymous_variant | 0.2 |
fbiC | 1304670 | c.1740G>T | synonymous_variant | 0.17 |
fbiC | 1304671 | p.Val581Thr | missense_variant | 0.17 |
fbiC | 1304675 | p.Gly582Glu | missense_variant | 0.17 |
fbiC | 1304691 | c.1761G>C | synonymous_variant | 0.16 |
fbiC | 1304694 | c.1764A>C | synonymous_variant | 0.16 |
fbiC | 1304703 | c.1773C>G | synonymous_variant | 0.16 |
fbiC | 1304715 | c.1785G>C | synonymous_variant | 0.15 |
fbiC | 1304748 | c.1818T>C | synonymous_variant | 0.14 |
fbiC | 1304853 | c.1923C>G | synonymous_variant | 0.17 |
fbiC | 1304877 | c.1947T>C | synonymous_variant | 0.15 |
fbiC | 1304878 | p.Arg650Ser | missense_variant | 0.14 |
fbiC | 1304893 | p.Gly655Ser | missense_variant | 0.16 |
embR | 1416901 | c.447G>C | synonymous_variant | 1.0 |
rrs | 1472028 | n.183A>T | non_coding_transcript_exon_variant | 0.14 |
rrs | 1472030 | n.185G>A | non_coding_transcript_exon_variant | 0.14 |
rrs | 1472031 | n.186G>A | non_coding_transcript_exon_variant | 0.14 |
rrs | 1472061 | n.216A>T | non_coding_transcript_exon_variant | 0.14 |
rrs | 1472075 | n.230A>G | non_coding_transcript_exon_variant | 0.22 |
rrs | 1472106 | n.261G>A | non_coding_transcript_exon_variant | 0.32 |
rrs | 1472112 | n.267C>T | non_coding_transcript_exon_variant | 0.43 |
rrs | 1472122 | n.277G>A | non_coding_transcript_exon_variant | 0.36 |
rrs | 1472127 | n.282C>T | non_coding_transcript_exon_variant | 0.44 |
rrs | 1472129 | n.284G>C | non_coding_transcript_exon_variant | 0.44 |
rrs | 1472137 | n.292G>A | non_coding_transcript_exon_variant | 0.46 |
rrs | 1472150 | n.305T>A | non_coding_transcript_exon_variant | 0.49 |
rrs | 1472151 | n.306C>T | non_coding_transcript_exon_variant | 0.48 |
rrs | 1472164 | n.319G>A | non_coding_transcript_exon_variant | 0.46 |
rrs | 1472172 | n.327T>C | non_coding_transcript_exon_variant | 0.47 |
rrs | 1472177 | n.332C>T | non_coding_transcript_exon_variant | 0.47 |
rrs | 1472203 | n.358G>A | non_coding_transcript_exon_variant | 0.47 |
rrs | 1472210 | n.365A>C | non_coding_transcript_exon_variant | 0.47 |
rrs | 1472213 | n.368G>C | non_coding_transcript_exon_variant | 0.47 |
rrs | 1472215 | n.370A>G | non_coding_transcript_exon_variant | 0.47 |
rrs | 1472225 | n.380C>A | non_coding_transcript_exon_variant | 0.49 |
rrs | 1472230 | n.385C>T | non_coding_transcript_exon_variant | 0.27 |
rrs | 1472234 | n.389T>C | non_coding_transcript_exon_variant | 0.49 |
rrs | 1472236 | n.391C>G | non_coding_transcript_exon_variant | 0.48 |
rrs | 1472240 | n.395G>A | non_coding_transcript_exon_variant | 0.48 |
rrs | 1472251 | n.406G>A | non_coding_transcript_exon_variant | 0.33 |
rrs | 1472253 | n.408G>T | non_coding_transcript_exon_variant | 0.23 |
rrs | 1472259 | n.414C>A | non_coding_transcript_exon_variant | 0.14 |
rrs | 1472507 | n.662C>G | non_coding_transcript_exon_variant | 0.19 |
rrs | 1472517 | n.672T>A | non_coding_transcript_exon_variant | 0.52 |
rrs | 1472518 | n.673G>T | non_coding_transcript_exon_variant | 0.52 |
rrs | 1472530 | n.685G>A | non_coding_transcript_exon_variant | 0.53 |
rrs | 1472541 | n.696T>G | non_coding_transcript_exon_variant | 0.53 |
rrs | 1472544 | n.699C>A | non_coding_transcript_exon_variant | 0.53 |
rrs | 1472545 | n.700A>T | non_coding_transcript_exon_variant | 0.52 |
rrs | 1472557 | n.712G>A | non_coding_transcript_exon_variant | 0.53 |
rrs | 1472570 | n.725G>A | non_coding_transcript_exon_variant | 0.54 |
rrs | 1472571 | n.726G>C | non_coding_transcript_exon_variant | 0.54 |
rrs | 1472573 | n.728C>T | non_coding_transcript_exon_variant | 0.58 |
rrs | 1472579 | n.734G>T | non_coding_transcript_exon_variant | 0.57 |
rrs | 1472581 | n.736A>T | non_coding_transcript_exon_variant | 0.58 |
rrs | 1472596 | n.751G>T | non_coding_transcript_exon_variant | 0.54 |
rrs | 1472598 | n.753A>T | non_coding_transcript_exon_variant | 0.53 |
rrs | 1472614 | n.769G>T | non_coding_transcript_exon_variant | 0.64 |
rrs | 1472616 | n.771G>A | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472655 | n.810G>A | non_coding_transcript_exon_variant | 0.69 |
rrs | 1472658 | n.813G>A | non_coding_transcript_exon_variant | 0.66 |
rrs | 1472661 | n.816A>G | non_coding_transcript_exon_variant | 0.64 |
rrs | 1472665 | n.820G>A | non_coding_transcript_exon_variant | 0.64 |
rrs | 1472669 | n.824_825insTAGG | non_coding_transcript_exon_variant | 0.64 |
rrs | 1472695 | n.850C>T | non_coding_transcript_exon_variant | 0.61 |
rrs | 1472697 | n.852T>C | non_coding_transcript_exon_variant | 0.59 |
rrs | 1472713 | n.868T>C | non_coding_transcript_exon_variant | 0.6 |
rrs | 1472716 | n.871C>T | non_coding_transcript_exon_variant | 0.59 |
rrs | 1472742 | n.897C>T | non_coding_transcript_exon_variant | 0.62 |
rrs | 1472744 | n.899A>G | non_coding_transcript_exon_variant | 0.62 |
rrs | 1472767 | n.922G>A | non_coding_transcript_exon_variant | 0.37 |
rrs | 1473226 | n.1381C>T | non_coding_transcript_exon_variant | 0.29 |
rrs | 1473248 | n.1403G>A | non_coding_transcript_exon_variant | 0.3 |
rrs | 1473249 | n.1404T>C | non_coding_transcript_exon_variant | 0.3 |
rrs | 1473252 | n.1407T>C | non_coding_transcript_exon_variant | 0.31 |
rrs | 1473255 | n.1410A>G | non_coding_transcript_exon_variant | 0.31 |
rrs | 1473259 | n.1414C>T | non_coding_transcript_exon_variant | 0.31 |
rrs | 1473260 | n.1415G>T | non_coding_transcript_exon_variant | 0.31 |
rrs | 1473276 | n.1431A>G | non_coding_transcript_exon_variant | 0.29 |
rrs | 1473281 | n.1436C>A | non_coding_transcript_exon_variant | 0.29 |
rrs | 1473282 | n.1437C>G | non_coding_transcript_exon_variant | 0.28 |
rrs | 1473291 | n.1446G>T | non_coding_transcript_exon_variant | 0.27 |
rrs | 1473296 | n.1451G>C | non_coding_transcript_exon_variant | 0.28 |
rrs | 1473297 | n.1452G>T | non_coding_transcript_exon_variant | 0.31 |
rrs | 1473301 | n.1456T>C | non_coding_transcript_exon_variant | 0.28 |
rrs | 1473327 | n.1482A>G | non_coding_transcript_exon_variant | 0.28 |
rrs | 1473328 | n.1483C>T | non_coding_transcript_exon_variant | 0.28 |
rrs | 1473352 | n.1507C>T | non_coding_transcript_exon_variant | 0.3 |
rrl | 1473756 | n.99G>A | non_coding_transcript_exon_variant | 0.13 |
rrl | 1473758 | n.101G>T | non_coding_transcript_exon_variant | 0.13 |
rrl | 1473806 | n.149C>T | non_coding_transcript_exon_variant | 0.18 |
rrl | 1473813 | n.156C>T | non_coding_transcript_exon_variant | 0.19 |
rrl | 1473839 | n.182G>T | non_coding_transcript_exon_variant | 0.18 |
rrl | 1474103 | n.446A>T | non_coding_transcript_exon_variant | 0.16 |
rrl | 1474104 | n.447G>A | non_coding_transcript_exon_variant | 0.17 |
rrl | 1474111 | n.454T>C | non_coding_transcript_exon_variant | 0.18 |
rrl | 1474112 | n.455T>A | non_coding_transcript_exon_variant | 0.16 |
rrl | 1474140 | n.483C>T | non_coding_transcript_exon_variant | 0.18 |
rrl | 1474151 | n.494C>T | non_coding_transcript_exon_variant | 0.17 |
rrl | 1474181 | n.524C>T | non_coding_transcript_exon_variant | 0.15 |
rrl | 1474466 | n.810delA | non_coding_transcript_exon_variant | 0.95 |
rrl | 1474639 | n.982G>A | non_coding_transcript_exon_variant | 0.18 |
rrl | 1475224 | n.1567T>C | non_coding_transcript_exon_variant | 0.88 |
rrl | 1475355 | n.1698C>T | non_coding_transcript_exon_variant | 0.14 |
rrl | 1475483 | n.1826C>T | non_coding_transcript_exon_variant | 0.14 |
rrl | 1475599 | n.1942A>G | non_coding_transcript_exon_variant | 0.17 |
rrl | 1475608 | n.1951T>C | non_coding_transcript_exon_variant | 0.19 |
rrl | 1475638 | n.1981C>T | non_coding_transcript_exon_variant | 0.18 |
rrl | 1475642 | n.1985T>C | non_coding_transcript_exon_variant | 0.19 |
rrl | 1475657 | n.2000A>G | non_coding_transcript_exon_variant | 0.14 |
rrl | 1475988 | n.2331A>G | non_coding_transcript_exon_variant | 0.17 |
rrl | 1476025 | n.2368G>T | non_coding_transcript_exon_variant | 0.15 |
rrl | 1476045 | n.2388G>T | non_coding_transcript_exon_variant | 0.2 |
rrl | 1476047 | n.2390G>T | non_coding_transcript_exon_variant | 0.2 |
rrl | 1476049 | n.2392C>T | non_coding_transcript_exon_variant | 0.2 |
rrl | 1476086 | n.2429G>A | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476089 | n.2432T>C | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476095 | n.2438C>G | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476115 | n.2458T>C | non_coding_transcript_exon_variant | 0.33 |
rrl | 1476117 | n.2460G>C | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476225 | n.2568T>G | non_coding_transcript_exon_variant | 0.56 |
rrl | 1476229 | n.2572C>T | non_coding_transcript_exon_variant | 0.61 |
rrl | 1476251 | n.2594T>C | non_coding_transcript_exon_variant | 0.68 |
rrl | 1476260 | n.2603A>G | non_coding_transcript_exon_variant | 0.68 |
rrl | 1476268 | n.2611A>T | non_coding_transcript_exon_variant | 0.66 |
rrl | 1476275 | n.2618T>A | non_coding_transcript_exon_variant | 0.66 |
rrl | 1476279 | n.2622G>A | non_coding_transcript_exon_variant | 0.66 |
rrl | 1476280 | n.2623A>C | non_coding_transcript_exon_variant | 0.66 |
rrl | 1476293 | n.2636C>T | non_coding_transcript_exon_variant | 0.69 |
rrl | 1476294 | n.2637A>G | non_coding_transcript_exon_variant | 0.7 |
rrl | 1476295 | n.2638C>G | non_coding_transcript_exon_variant | 0.69 |
rrl | 1476296 | n.2639C>T | non_coding_transcript_exon_variant | 0.69 |
rrl | 1476297 | n.2640C>T | non_coding_transcript_exon_variant | 0.69 |
rrl | 1476301 | n.2644A>C | non_coding_transcript_exon_variant | 0.68 |
rrl | 1476302 | n.2645G>A | non_coding_transcript_exon_variant | 0.68 |
rrl | 1476311 | n.2654G>C | non_coding_transcript_exon_variant | 0.68 |
rrl | 1476312 | n.2655T>C | non_coding_transcript_exon_variant | 0.68 |
rrl | 1476313 | n.2656G>A | non_coding_transcript_exon_variant | 0.7 |
rrl | 1476332 | n.2675G>C | non_coding_transcript_exon_variant | 0.83 |
rrl | 1476353 | n.2696G>T | non_coding_transcript_exon_variant | 0.87 |
rrl | 1476358 | n.2701T>C | non_coding_transcript_exon_variant | 0.87 |
rrl | 1476369 | n.2712C>T | non_coding_transcript_exon_variant | 0.87 |
rrl | 1476372 | n.2715T>C | non_coding_transcript_exon_variant | 0.87 |
rrl | 1476382 | n.2725A>G | non_coding_transcript_exon_variant | 0.87 |
rrl | 1476383 | n.2726T>A | non_coding_transcript_exon_variant | 0.72 |
rrl | 1476408 | n.2751G>A | non_coding_transcript_exon_variant | 0.87 |
rrl | 1476425 | n.2768G>T | non_coding_transcript_exon_variant | 0.88 |
rrl | 1476428 | n.2771C>T | non_coding_transcript_exon_variant | 0.87 |
rrl | 1476429 | n.2772A>C | non_coding_transcript_exon_variant | 0.87 |
rrl | 1476466 | n.2809C>T | non_coding_transcript_exon_variant | 0.88 |
rrl | 1476481 | n.2824T>C | non_coding_transcript_exon_variant | 0.86 |
rrl | 1476506 | n.2849T>C | non_coding_transcript_exon_variant | 0.79 |
rrl | 1476514 | n.2857C>T | non_coding_transcript_exon_variant | 0.65 |
rrl | 1476517 | n.2860C>T | non_coding_transcript_exon_variant | 0.62 |
rrl | 1476519 | n.2862C>G | non_coding_transcript_exon_variant | 0.62 |
rrl | 1476524 | n.2867C>A | non_coding_transcript_exon_variant | 0.62 |
rrl | 1476525 | n.2868A>G | non_coding_transcript_exon_variant | 0.62 |
rrl | 1476530 | n.2873C>T | non_coding_transcript_exon_variant | 0.63 |
rrl | 1476536 | n.2879G>A | non_coding_transcript_exon_variant | 0.62 |
rrl | 1476537 | n.2880A>G | non_coding_transcript_exon_variant | 0.61 |
rrl | 1476538 | n.2881A>G | non_coding_transcript_exon_variant | 0.61 |
rrl | 1476540 | n.2883C>G | non_coding_transcript_exon_variant | 0.61 |
rrl | 1476547 | n.2890C>T | non_coding_transcript_exon_variant | 0.61 |
rrl | 1476567 | n.2910C>T | non_coding_transcript_exon_variant | 0.63 |
rrl | 1476572 | n.2915G>A | non_coding_transcript_exon_variant | 0.61 |
rrl | 1476573 | n.2916A>T | non_coding_transcript_exon_variant | 0.62 |
rrl | 1476584 | n.2927C>T | non_coding_transcript_exon_variant | 0.63 |
rrl | 1476589 | n.2932G>A | non_coding_transcript_exon_variant | 0.46 |
rrl | 1476628 | n.2971T>A | non_coding_transcript_exon_variant | 0.15 |
inhA | 1674537 | c.336C>G | synonymous_variant | 0.19 |
inhA | 1674542 | p.Ala114Glu | missense_variant | 0.18 |
inhA | 1674549 | c.348G>C | synonymous_variant | 0.18 |
inhA | 1674555 | c.354G>A | synonymous_variant | 0.18 |
inhA | 1674561 | c.360C>T | synonymous_variant | 0.19 |
inhA | 1674564 | c.363C>T | synonymous_variant | 0.19 |
inhA | 1674582 | c.381T>C | synonymous_variant | 0.25 |
inhA | 1674585 | c.384T>C | synonymous_variant | 0.24 |
inhA | 1674589 | p.Met130Leu | missense_variant | 0.22 |
inhA | 1674624 | c.423A>C | synonymous_variant | 0.19 |
inhA | 1674636 | c.435C>G | synonymous_variant | 0.19 |
inhA | 1674756 | c.555T>C | synonymous_variant | 0.14 |
inhA | 1674771 | c.570C>G | synonymous_variant | 0.13 |
inhA | 1674774 | c.573A>G | synonymous_variant | 0.13 |
inhA | 1674780 | c.579T>G | synonymous_variant | 0.13 |
rpsA | 1833874 | c.333T>C | synonymous_variant | 0.17 |
rpsA | 1833928 | c.387G>C | synonymous_variant | 0.17 |
rpsA | 1833940 | c.399C>G | synonymous_variant | 0.17 |
rpsA | 1833970 | c.429G>C | synonymous_variant | 0.17 |
rpsA | 1833979 | c.438T>C | synonymous_variant | 0.17 |
rpsA | 1834000 | c.459G>C | synonymous_variant | 0.21 |
rpsA | 1834015 | c.474G>C | synonymous_variant | 0.14 |
rpsA | 1834240 | c.699T>C | synonymous_variant | 0.14 |
rpsA | 1834249 | c.708T>C | synonymous_variant | 0.19 |
rpsA | 1834261 | c.720A>C | synonymous_variant | 0.17 |
rpsA | 1834264 | c.723G>C | synonymous_variant | 0.18 |
rpsA | 1834297 | c.756C>G | synonymous_variant | 0.18 |
rpsA | 1834303 | c.762T>G | synonymous_variant | 0.19 |
rpsA | 1834306 | c.765T>C | synonymous_variant | 0.19 |
rpsA | 1834348 | c.807T>C | synonymous_variant | 0.18 |
rpsA | 1834366 | c.825A>G | synonymous_variant | 0.16 |
rpsA | 1834375 | c.834G>A | synonymous_variant | 0.16 |
rpsA | 1834396 | c.855G>C | synonymous_variant | 0.15 |
rpsA | 1834411 | c.870T>C | synonymous_variant | 0.14 |
rpsA | 1834423 | c.882G>C | synonymous_variant | 0.17 |
rpsA | 1834451 | c.910T>C | synonymous_variant | 0.19 |
rpsA | 1834465 | c.924T>C | synonymous_variant | 0.27 |
rpsA | 1834468 | c.927A>G | synonymous_variant | 0.25 |
rpsA | 1834474 | c.933C>G | synonymous_variant | 0.25 |
rpsA | 1834489 | c.948T>C | synonymous_variant | 0.25 |
rpsA | 1834498 | c.957C>T | synonymous_variant | 0.25 |
rpsA | 1834528 | c.987T>C | synonymous_variant | 0.27 |
rpsA | 1834546 | c.1005T>C | synonymous_variant | 0.36 |
rpsA | 1834555 | c.1014T>C | synonymous_variant | 0.31 |
rpsA | 1834558 | c.1017C>G | synonymous_variant | 0.29 |
rpsA | 1834606 | c.1065C>G | synonymous_variant | 0.29 |
rpsA | 1834609 | c.1068T>C | synonymous_variant | 0.27 |
rpsA | 1834622 | c.1081_1083delTCGinsAGC | synonymous_variant | 0.25 |
rpsA | 1834633 | c.1092A>G | synonymous_variant | 0.31 |
rpsA | 1834639 | c.1098T>C | synonymous_variant | 0.2 |
rpsA | 1834666 | c.1125G>C | synonymous_variant | 0.21 |
rpsA | 1834669 | c.1128G>C | synonymous_variant | 0.21 |
rpsA | 1834688 | c.1147_1149delAGTinsTCC | synonymous_variant | 0.24 |
rpsA | 1834732 | c.1191T>C | synonymous_variant | 0.19 |
rpsA | 1834733 | p.Ala398Pro | missense_variant | 0.19 |
ndh | 2102098 | c.945G>C | synonymous_variant | 0.16 |
ndh | 2102103 | p.Tyr314His | missense_variant | 0.15 |
ndh | 2102104 | c.939G>C | synonymous_variant | 0.15 |
ndh | 2102110 | c.933T>C | synonymous_variant | 0.16 |
PPE35 | 2170487 | c.126T>A | synonymous_variant | 1.0 |
Rv1979c | 2221853 | p.Phe438Ile | missense_variant | 1.0 |
kasA | 2518138 | c.24T>C | synonymous_variant | 0.15 |
kasA | 2518162 | c.48G>A | synonymous_variant | 0.15 |
kasA | 2518174 | c.60A>G | synonymous_variant | 0.15 |
kasA | 2518190 | p.Ser26Ala | missense_variant | 0.17 |
kasA | 2518199 | p.Ile29Val | missense_variant | 0.14 |
kasA | 2518248 | p.Ala45Val | missense_variant | 0.14 |
kasA | 2518261 | p.Glu49Asp | missense_variant | 0.13 |
kasA | 2518723 | p.Glu203Asp | missense_variant | 0.17 |
kasA | 2518732 | c.618C>G | synonymous_variant | 0.15 |
kasA | 2518741 | c.627G>C | synonymous_variant | 0.23 |
kasA | 2518747 | c.633C>G | synonymous_variant | 0.23 |
kasA | 2518768 | c.654C>G | synonymous_variant | 0.18 |
kasA | 2518783 | c.669T>C | synonymous_variant | 0.22 |
kasA | 2518792 | c.678C>G | synonymous_variant | 0.21 |
kasA | 2518795 | c.681C>G | synonymous_variant | 0.2 |
kasA | 2518822 | c.708C>G | synonymous_variant | 0.18 |
kasA | 2518825 | c.711T>C | synonymous_variant | 0.17 |
kasA | 2518843 | c.729T>C | synonymous_variant | 0.15 |
kasA | 2518855 | c.741C>G | synonymous_variant | 0.16 |
kasA | 2518864 | c.750G>C | synonymous_variant | 0.14 |
ahpC | 2726600 | c.408T>C | synonymous_variant | 0.14 |
ahpC | 2726612 | c.420C>G | synonymous_variant | 0.16 |
ahpC | 2726638 | p.Ala149Val | missense_variant | 0.15 |
ahpC | 2726645 | c.453C>G | synonymous_variant | 0.16 |
ahpC | 2726657 | c.465A>C | synonymous_variant | 0.17 |
ahpC | 2726717 | c.525A>G | synonymous_variant | 0.17 |
ahpC | 2726735 | c.543C>T | synonymous_variant | 0.13 |
folC | 2746948 | c.651G>C | synonymous_variant | 0.15 |
folC | 2746979 | p.Ala207Asp | missense_variant | 0.13 |
ribD | 2987369 | c.531G>A | synonymous_variant | 1.0 |
Rv2752c | 3065993 | p.Val67Ile | missense_variant | 0.19 |
Rv2752c | 3065994 | c.198T>C | synonymous_variant | 0.19 |
Rv2752c | 3065997 | c.195C>G | synonymous_variant | 0.19 |
Rv2752c | 3066002 | p.Met64Leu | missense_variant | 0.19 |
Rv2752c | 3066024 | c.168T>C | synonymous_variant | 0.19 |
Rv2752c | 3066040 | p.Gly51Thr | missense_variant | 0.14 |
Rv2752c | 3066050 | p.Leu48Met | missense_variant | 0.14 |
Rv2752c | 3066054 | c.138T>G | synonymous_variant | 0.15 |
Rv2752c | 3066066 | c.126T>C | synonymous_variant | 0.15 |
thyX | 3067762 | c.184C>A | synonymous_variant | 0.14 |
thyA | 3073812 | c.660C>G | synonymous_variant | 0.15 |
thyA | 3073824 | c.648A>C | synonymous_variant | 0.17 |
thyA | 3073827 | c.645A>G | synonymous_variant | 0.17 |
thyA | 3073839 | c.633T>C | synonymous_variant | 0.21 |
thyA | 3073872 | p.Ile200Val | missense_variant | 0.21 |
thyA | 3073878 | c.594G>A | synonymous_variant | 0.21 |
thyA | 3073892 | c.580T>C | synonymous_variant | 0.2 |
thyA | 3073893 | c.579C>G | synonymous_variant | 0.2 |
thyA | 3073925 | c.547T>C | synonymous_variant | 0.22 |
thyA | 3073926 | c.546G>C | synonymous_variant | 0.24 |
thyA | 3073929 | c.543T>C | synonymous_variant | 0.22 |
thyA | 3073953 | c.519T>C | synonymous_variant | 0.17 |
thyA | 3073975 | p.Arg166Pro | missense_variant | 0.87 |
Rv3236c | 3612013 | c.1104A>T | synonymous_variant | 1.0 |
Rv3236c | 3612032 | p.Met362Arg | missense_variant | 1.0 |
fbiB | 3642668 | c.1134A>C | synonymous_variant | 0.14 |
alr | 3840329 | c.1092T>C | synonymous_variant | 0.12 |
alr | 3840344 | c.1077A>G | synonymous_variant | 0.17 |
alr | 3840353 | c.1068T>C | synonymous_variant | 0.14 |
alr | 3840407 | c.1014G>C | synonymous_variant | 0.14 |
alr | 3840435 | p.Leu329Ser | missense_variant | 0.19 |
alr | 3840442 | p.Glu327Gln | missense_variant | 0.17 |
rpoA | 3877857 | c.651G>A | synonymous_variant | 0.17 |
rpoA | 3877866 | c.642G>C | synonymous_variant | 0.17 |
rpoA | 3877872 | c.636C>T | synonymous_variant | 0.17 |
rpoA | 3877899 | p.Ser203Arg | missense_variant | 0.14 |
rpoA | 3877905 | c.603A>G | synonymous_variant | 0.14 |
rpoA | 3877909 | p.Asn200Ser | missense_variant | 0.14 |
rpoA | 3878055 | c.453A>G | synonymous_variant | 0.15 |
rpoA | 3878061 | c.447G>C | synonymous_variant | 0.15 |
rpoA | 3878067 | c.441C>G | synonymous_variant | 0.15 |
rpoA | 3878070 | c.438T>C | synonymous_variant | 0.15 |
rpoA | 3878082 | c.426T>C | synonymous_variant | 0.15 |
rpoA | 3878100 | c.408C>G | synonymous_variant | 0.15 |
rpoA | 3878106 | c.402G>C | synonymous_variant | 0.15 |
rpoA | 3878118 | c.390T>C | synonymous_variant | 0.15 |
rpoA | 3878184 | c.324C>T | synonymous_variant | 0.17 |
rpoA | 3878187 | c.321C>G | synonymous_variant | 0.17 |
rpoA | 3878193 | c.315T>C | synonymous_variant | 0.17 |
clpC1 | 4038271 | p.Pro812Ala | missense_variant | 0.16 |
clpC1 | 4038272 | p.Gly811Ser | missense_variant | 0.16 |
clpC1 | 4038278 | c.2427T>C | synonymous_variant | 0.16 |
clpC1 | 4038293 | c.2412G>C | synonymous_variant | 0.17 |
clpC1 | 4038302 | c.2403C>G | synonymous_variant | 0.18 |
clpC1 | 4038308 | p.Val799Ile | missense_variant | 0.19 |
clpC1 | 4038317 | c.2388G>C | synonymous_variant | 0.2 |
clpC1 | 4038347 | c.2358G>C | synonymous_variant | 0.31 |
clpC1 | 4038356 | c.2349T>C | synonymous_variant | 0.29 |
clpC1 | 4038359 | c.2346A>G | synonymous_variant | 0.29 |
clpC1 | 4038368 | c.2337T>C | synonymous_variant | 0.28 |
clpC1 | 4038388 | c.2317T>C | synonymous_variant | 0.24 |
clpC1 | 4038398 | c.2307G>T | synonymous_variant | 0.21 |
clpC1 | 4038403 | c.2302T>C | synonymous_variant | 0.21 |
clpC1 | 4038419 | c.2286T>C | synonymous_variant | 0.17 |
clpC1 | 4038434 | c.2271G>C | synonymous_variant | 0.2 |
clpC1 | 4038444 | p.Ala754Lys | missense_variant | 0.18 |
clpC1 | 4038446 | c.2259T>C | synonymous_variant | 0.18 |
clpC1 | 4038452 | c.2253G>C | synonymous_variant | 0.17 |
clpC1 | 4038461 | p.Ala748Asp | missense_variant | 0.17 |
clpC1 | 4038815 | c.1890G>T | synonymous_variant | 0.15 |
clpC1 | 4038878 | c.1827A>G | synonymous_variant | 0.21 |
clpC1 | 4038908 | c.1797C>G | synonymous_variant | 0.2 |
clpC1 | 4038914 | c.1791G>C | synonymous_variant | 0.22 |
clpC1 | 4038923 | c.1782A>G | synonymous_variant | 0.2 |
clpC1 | 4038932 | c.1773G>C | synonymous_variant | 0.22 |
clpC1 | 4038956 | c.1749T>C | synonymous_variant | 0.13 |
clpC1 | 4039682 | c.1023C>G | synonymous_variant | 0.14 |
clpC1 | 4039685 | c.1020C>T | synonymous_variant | 0.19 |
clpC1 | 4039694 | c.1011G>C | synonymous_variant | 0.14 |
clpC1 | 4039724 | c.981A>G | synonymous_variant | 0.14 |
clpC1 | 4039766 | c.939T>C | synonymous_variant | 0.19 |
clpC1 | 4039930 | p.Ser259Cys | missense_variant | 0.14 |
clpC1 | 4039996 | p.Glu237Gln | missense_variant | 0.14 |
clpC1 | 4040201 | c.504C>G | synonymous_variant | 0.15 |
clpC1 | 4040363 | c.342A>C | synonymous_variant | 0.14 |
clpC1 | 4040393 | c.312G>C | synonymous_variant | 0.14 |
embC | 4240425 | p.Arg188Pro | missense_variant | 1.0 |
embC | 4240477 | c.615C>A | synonymous_variant | 1.0 |
embC | 4240591 | c.729C>G | synonymous_variant | 0.17 |
embC | 4240594 | c.732C>G | synonymous_variant | 0.15 |
embC | 4240600 | c.738G>C | synonymous_variant | 0.15 |
embC | 4240819 | c.957A>G | synonymous_variant | 0.15 |
embC | 4240825 | c.963G>A | synonymous_variant | 0.16 |
embC | 4240831 | c.969T>G | synonymous_variant | 0.17 |
embC | 4241026 | c.1164C>G | synonymous_variant | 0.14 |
embC | 4241035 | c.1173G>A | synonymous_variant | 0.13 |
embC | 4241050 | c.1188T>G | synonymous_variant | 0.18 |
embA | 4244214 | p.Ala328Ser | missense_variant | 1.0 |
embA | 4244849 | c.1617C>G | synonymous_variant | 1.0 |
embB | 4247198 | p.Thr229Pro | missense_variant | 1.0 |
embB | 4247381 | p.Trp290Arg | missense_variant | 0.95 |
embB | 4247743 | c.1230C>G | synonymous_variant | 0.17 |
embB | 4247773 | c.1260G>A | synonymous_variant | 0.17 |
embB | 4247776 | c.1263G>T | synonymous_variant | 0.17 |
embB | 4247779 | c.1266C>G | synonymous_variant | 0.18 |
embB | 4247785 | c.1272G>C | synonymous_variant | 0.18 |
embB | 4247806 | c.1293G>C | synonymous_variant | 0.17 |
embB | 4247819 | p.Val436Ile | missense_variant | 0.15 |
embB | 4247974 | c.1461C>G | synonymous_variant | 0.16 |
embB | 4247977 | c.1464C>G | synonymous_variant | 0.16 |
embB | 4247986 | c.1473C>G | synonymous_variant | 0.16 |
embB | 4248007 | c.1494C>G | synonymous_variant | 0.16 |
embB | 4248011 | p.Ser500Ala | missense_variant | 0.16 |
embB | 4248052 | c.1539G>A | synonymous_variant | 0.17 |
embB | 4248055 | c.1542G>C | synonymous_variant | 0.17 |
embB | 4248097 | c.1584C>G | synonymous_variant | 0.16 |
embB | 4248206 | p.Ser565Gly | missense_variant | 0.15 |
embB | 4248220 | c.1707A>G | synonymous_variant | 0.16 |
embB | 4248241 | c.1728C>T | synonymous_variant | 0.16 |
embB | 4248277 | c.1764G>C | synonymous_variant | 0.14 |
embB | 4249268 | p.Asp919Tyr | missense_variant | 0.14 |
embB | 4249276 | c.2763A>G | synonymous_variant | 0.15 |
embB | 4249282 | c.2769A>C | synonymous_variant | 0.14 |
embB | 4249321 | c.2808A>C | synonymous_variant | 0.17 |
embB | 4249322 | p.Ala937Ser | missense_variant | 0.17 |
embB | 4249325 | p.Lys938Asp | missense_variant | 0.15 |
embB | 4249340 | p.Ala943Thr | missense_variant | 0.13 |
embB | 4249381 | c.2868A>G | synonymous_variant | 0.15 |
aftB | 4268115 | p.Leu241Arg | missense_variant | 1.0 |
aftB | 4268696 | c.141G>A | synonymous_variant | 1.0 |
ethA | 4326298 | c.1176G>A | synonymous_variant | 1.0 |
whiB6 | 4338567 | c.-46C>A | upstream_gene_variant | 1.0 |