EBG00000313339 - n.2618T>A


Drug resistance types
23 Sensitive 4 RR-TB 23 HR-TB 14 MDR-TB 8 Pre-XDR-TB 0 XDR-TB 384 Other
lineage Counts
lineage Count
lineage2.2.1 35
lineage4.9 265
lineage4.5 4
lineage4.1.1.3 4
lineage4.3.4.2 2
lineage4.1.2.1 10
lineage4.4.1.2 3
lineage3.1.1 1
lineage4.3.2.1 4
La1.2 17
lineage4.3.3 8
La1.7.1 7
lineage4.1.2 2
lineage2.2.1.1 5
lineage4.7 3
La1.8.1 23
lineage4.3.4.2.1 5
lineage4.9.1 1
lineage1.2.1.2.1;lineage4.9 1
lineage4.8 10
lineage1.1.3 1
lineage1.1.1.1 3
lineage4.1.1.2 1
lineage4.3.2 1
lineage4 2
lineage3 7
La1.8.2 7
lineage4.1.1 1
lineage4.8;lineage4.9 2
lineage4.2.1.1 3
lineage4.3.4.1 1
lineage1.2.1.2.1 2
lineage4.4.2 3
lineage4.4.1.1 3
lineage2.2.2 2
lineage2.1 1
lineage4.4.1.1.1 1
lineage2.2.1.2 1
lineage4.6.1.2 1
lineage4.3 1
lineage1.1.2 1
lineage3.1.2.1 1
spoligotype Counts
spoligotype Count
None 456
Geographic prevalence
Country level data for this variant is available for 11 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR5863929 Pre-XDR-TB lineage2.2.1 None
SRR13861227 Other lineage4.9 None
SRR13861718 Other lineage4.9 None
SRR13861438 Other lineage4.9 None
SRR13861608 Other lineage4.9 None
SRR5065546 Sensitive lineage4.5 None
SRR6981966 Other lineage2.2.1 None
SRR13861419 Other lineage4.9 None
ERR4769424 Sensitive lineage4.9 None
SRR6397551 Other lineage4.1.1.3 None
SRR13861533 Other lineage4.9 None
SRR13861619 Other lineage4.9 None
ERR3806453 Other lineage4.3.4.2 None
SRR6398007 Other lineage4.1.2.1 ca
SRR13861651 Other lineage4.9 None
SRR13861683 Other lineage4.9 None
SRR13861452 Other lineage4.9 None
SRR13861403 Other lineage4.9 None
SRR13861325 Other lineage4.9 None
SRR13861240 Other lineage4.9 None
SRR13861294 Other lineage4.9 None
SRR6397585 Other lineage4.4.1.2 None
SRR12882020 Other lineage3.1.1 None
SRR13861375 Other lineage4.9 None
SRR13861708 Sensitive lineage4.9 None
SRR10869293 Pre-XDR-TB lineage2.2.1 None
SRR13861535 Other lineage4.9 None
SRR13861514 Other lineage4.9 None
SRR13861417 HR-TB lineage4.9 None
SRR6981982 Sensitive lineage4.1.2.1 None
SRR13861486 Other lineage4.9 None
SRR13861422 Other lineage4.9 None
SRR6982066 Other lineage4.3.2.1 None
ERR6201802 Other La1.2 None
ERR6201814 Other La1.2 None
SRR13861285 Other lineage4.9 None
SRR14801688 Sensitive lineage4.3.3 None
SRR13861589 Other lineage4.9 None
ERR6208726 Other La1.2 None
SRR13861351 Other lineage4.9 None
SRR13861519 Other lineage4.9 None
SRR7236239 Other La1.7.1 None
DRR184932 Other lineage2.2.1 None
SRR13861692 Other lineage4.9 None
SRR13861231 Other lineage4.9 None
SRR13861573 Other lineage4.9 None
SRR13861537 Other lineage4.9 None
DRR184991 Other lineage4.1.2 vn
SRR5526841 MDR-TB lineage2.2.1.1 None
SRR6397770 Other lineage4.7 None
SRR7240441 Other La1.8.1 None
SRR13861361 Other lineage4.9 None
ERR036225 Other lineage4.3.4.2.1 None
SRR1792157 Other La1.8.1 None
ERR1023527 Other lineage4.9.1 None
SRR6045036 Other lineage4.9 None
SRR13861410 Other lineage4.9 None
SRR6153036 Other lineage1.2.1.2.1;lineage4.9 None
SRR7131050 MDR-TB lineage4.3.3 None
SRR13861406 Other lineage4.9 None
SRR13861265 HR-TB lineage4.9 None
ERR2228888 Other lineage4.8 None
SRR21675949 Other lineage4.3.3 None
SRR13861248 Other lineage4.9 None
SRR13861495 HR-TB lineage4.9 None
SRR10869051 HR-TB lineage2.2.1 None
SRR13861461 Other lineage4.9 None
SRR13861491 Other lineage4.9 None
SRR21711124 Other lineage1.1.3 None
SRR13861420 Other lineage4.9 None
SRR13861219 Other lineage4.9 None
SRR13861304 Other lineage4.9 None
SRR13861468 Other lineage4.9 None
SRR5065506 HR-TB lineage1.1.1.1 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
SRR13861264 HR-TB lineage4.9 None
SRR1791909 Other La1.7.1 None
SRR8073606 Other La1.8.1 None
SRR13861389 Other lineage4.9 None
SRR1792140 Other La1.8.1 None
SRR13861462 Other lineage4.9 None
DRR185000 Other lineage1.1.1.1 None
SRR14165143 Sensitive lineage4.1.1.3 None
SRR13861278 Other lineage4.9 None
SRR13861400 Other lineage4.9 None
SRR13861254 Other lineage4.9 None
SRR13861158 Other lineage4.9 None
SRR13861507 Other lineage4.9 None
ERR6201800 Other La1.2 None
SRR6982088 Other lineage4.1.1.2 None
SRR13861482 Other lineage4.9 None
SRR13861653 Other lineage4.9 None
SRR13861479 Other lineage4.9 None
SRR6152979 Other lineage4.7 None
SRR2101643 Other lineage2.2.1 None
SRR13861206 Other lineage4.9 None
SRR7236411 Other La1.8.1 None
SRR13861268 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR2101691 Other lineage2.2.1 None
SRR13861299 Other lineage4.9 None
SRR6397359 Sensitive lineage4.3.2 ca
SRR13861696 Other lineage4.9 None
ERR6198389 Other La1.2 None
SRR13861702 Other lineage4.9 None
ERR2228859 Other lineage4.8 None
SRR13861494 Other lineage4.9 None
SRR18391760 Other La1.7.1 None
SRR7240448 Other La1.8.1 None
ERR2446382 Other lineage4 None
SRR13861637 Other lineage4.9 None
SRR13861496 Other lineage4.9 None
SRR13861669 Other lineage4.9 None
ERR2229781 Other lineage4.9 None
SRR6982194 Other lineage2.2.1 None
SRR13861230 Other lineage4.9 None
SRR7240449 Other La1.8.1 None
SRR13861707 Other lineage4.9 None
SRR17567952 Other lineage4.4.1.2 None
SRR13199746 Other La1.7.1 None
ERR4132447 Other lineage4.3.3 None
SRR13861236 Other lineage4.9 None
ERR6201798 Other La1.2 None
SRR13861503 Other lineage4.9 None
SRR13861241 HR-TB lineage4.9 None
SRR13861443 Other lineage4.9 None
SRR13861532 Other lineage4.9 None
SRR13861374 Other lineage4.9 None
ERR2446248 Other lineage3 nl
SRR13861174 Other lineage4.9 None
ERR6337385 Other La1.2 None
SRR21728339 Other lineage3 None
SRR13861586 Other lineage4.9 None
SRR13861201 Other lineage4.9 None
SRR13861390 Other lineage4.9 None
SRR13861510 Other lineage4.9 None
SRR13861232 Other lineage4.9 None
SRR7236379 Other La1.8.1 None
SRR13861592 Other lineage4.9 None
SRR13861282 Other lineage4.9 None
SRR13861217 Other lineage4.9 None
ERR037529 Other lineage4.3.4.2.1 None
SRR13861312 Other lineage4.9 None
SRR13861476 Other lineage4.9 None
SRR13861459 HR-TB lineage4.9 None
SRR13861613 Other lineage4.9 None
SRR13861673 Other lineage4.9 None
SRR13861180 Other lineage4.9 None
SRR13861597 Other lineage4.9 None
SRR13861454 Other lineage4.9 None
SRR10397212 Pre-XDR-TB lineage2.2.1 None
ERR6149874 Other La1.8.2 None
SRR11349188 MDR-TB lineage4.1.2.1 None
SRR13861530 Other lineage4.9 None
SRR6397568 Other lineage4.1.1 None
ERR2228810 Other lineage4.8;lineage4.9 None
SRR13861562 Other lineage4.9 None
SRR7240070 Other La1.8.1 None
SRR13861416 Other lineage4.9 None
SRR13861156 Other lineage4.9 None
SRR7236371 Other La1.8.1 None
ERR2228874 Other lineage4.8;lineage4.9 None
SRR13861685 Other lineage4.9 None
SRR6397588 Other lineage2.2.1 None
DRR184629 Other lineage2.2.1 None
SRR13861642 Other lineage4.9 None
SRR10315603 MDR-TB lineage4.8 None
SRR13861593 Other lineage4.9 None
SRR13861569 Other lineage4.9 None
SRR13861464 Other lineage4.9 None
SRR13861383 Other lineage4.9 None
SRR6982400 Other lineage2.2.1 None
SRR6397575 Other lineage4.3.4.2.1 None
SRR13861521 Other lineage4.9 None
SRR13861141 Other lineage4.9 None
SRR13861186 Other lineage4.9 None
SRR21685367 MDR-TB lineage2.2.1 None
SRR13861274 Other lineage4.9 None
ERR7801177 Other lineage4.3.4.2.1 None
SRR13861583 Other lineage4.9 None
SRR13861487 Other lineage4.9 None
SRR6397727 Other lineage4.2.1.1 None
SRR6981963 HR-TB lineage4.3.4.1 None
SRR7131185 Other lineage4.1.2.1 None
SRR13861498 Other lineage4.9 None
SRR13861534 Other lineage4.9 None
ERR6201937 Other La1.2 None
SRR13861175 Other lineage4.9 None
ERR6198391 Other La1.2 None
ERR6149876 Other La1.8.2 None
SRR2101628 Other lineage4.3.2.1 None
SRR6397396 HR-TB lineage1.2.1.2.1 None
SRR13861372 Other lineage4.9 None
SRR13861631 Other lineage4.9 None
ERR6338288 Other La1.2 None
SRR5065436 HR-TB lineage2.2.1 None
SRR13861415 Other lineage4.9 None
SRR7240069 Other La1.8.1 None
SRR13861188 Other lineage4.9 None
SRR13861545 Other lineage4.9 None
ERR6209443 Other La1.2 None
ERR4769429 Other lineage4.9 None
SRR13861724 Other lineage4.9 None
SRR13861634 Other lineage4.9 None
SRR13861504 Other lineage4.9 None
SRR13861144 Other lineage4.9 None
SRR13861600 Other lineage4.9 None
SRR13861243 Other lineage4.9 None
SRR13861195 Other lineage4.9 None
SRR13861391 Other lineage4.9 None
SRR13861502 HR-TB lineage4.9 None
SRR13861280 Other lineage4.9 None
DRR184617 HR-TB lineage2.2.1.1 None
SRR7131061 Other lineage2.2.1 None
SRR21728710 Other lineage4.1.1.3 None
SRR13861567 Other lineage4.9 None
SRR13861442 Sensitive lineage4.9 None
SRR13861414 Other lineage4.9 None
SRR13861431 Other lineage4.9 None
SRR6896539 RR-TB lineage3 None
SRR6397638 Other lineage4.2.1.1 None
SRR15316549 RR-TB lineage4.4.2 None
SRR6397642 Other lineage4.4.1.1 None
SRR13861161 Other lineage4.9 None
SRR13861210 Other lineage4.9 None
SRR6982494 Other lineage2.2.2 None
SRR7240292 Other La1.8.1 None
SRR13861725 Other lineage4.9 None
ERR6201910 Other La1.2 None
ERR2229337 Other lineage4.8 None
SRR13861728 Other lineage4.9 None
SRR13861470 Other lineage4.9 None
SRR6982383 Other lineage4.3.2.1 None
SRR13861478 Sensitive lineage4.9 None
SRR13861433 Other lineage4.9 None
SRR13861191 Other lineage4.9 None
SRR15723287 Other lineage4.4.2 None
SRR6397548 HR-TB lineage1.2.1.2.1 None
SRR1791921 Other La1.8.1 None
ERR4814407 Sensitive lineage4.5 None
SRR6982275 Other lineage2.2.1 None
ERR6201812 Other La1.2 None
SRR13861330 Other lineage4.9 None
SRR7131047 MDR-TB lineage4.3.3 None
SRR13861516 Other lineage4.9 None
SRR13861322 Other lineage4.9 None
SRR13861411 Other lineage4.9 None
SRR13861463 Other lineage4.9 None
SRR13861283 Other lineage4.9 None
SRR6152886 HR-TB lineage3 None
ERR2851371 Other lineage4.9 None
SRR13861246 Other lineage4.9 None
SRR5341225 Sensitive lineage3 in
SRR13861429 Other lineage4.9 None
SRR13861641 Other lineage4.9 None
SRR13861421 Other lineage4.9 None
SRR13861329 Other lineage4.9 None
SRR1791940 Other La1.8.1 None
SRR13861639 Other lineage4.9 None
ERR9786844 Other lineage4.3.4.2 None
SRR16156213 MDR-TB lineage2.2.1 None
SRR13861352 Other lineage4.9 None
SRR13861515 Other lineage4.9 None
SRR13861691 Other lineage4.9 None
SRR13861607 Other lineage4.9 None
ERR2229358 Other lineage4.8 None
SRR6855905 Other lineage4.1.2 None
SRR13861668 Other lineage4.9 None
SRR13861286 Other lineage4.9 None
SRR13861572 Other lineage4.9 None
SRR14807573 MDR-TB lineage2.2.1 None
ERR036215 Other lineage4.8 None
SRR13861318 Other lineage4.9 None
SRR13861179 Other lineage4.9 None
SRR13861598 Other lineage4.9 None
SRR6856051 Other lineage2.2.1 None
SRR21240084 Sensitive lineage4.1.2.1 None
SRR13861430 Other lineage4.9 None
SRR6046015 Other lineage4.9 None
SRR13861343 Other lineage4.9 None
SRR13861159 Other lineage4.9 None
SRR5065292 HR-TB lineage2.1 vn
SRR7236240 Other La1.8.1 None
SRR13861428 Other lineage4.9 None
SRR13861187 Other lineage4.9 None
SRR13861200 Other lineage4.9 None
SRR13861392 Other lineage4.9 None
SRR13861303 Other lineage4.9 None
SRR13861678 Sensitive lineage4.9 None
SRR13861423 Other lineage4.9 None
SRR13861449 Other lineage4.9 None
SRR13861566 Other lineage4.9 None
SRR13861715 Other lineage4.9 None
SRR10315641 MDR-TB lineage4.4.1.1.1 None
SRR13861522 Other lineage4.9 None
SRR6152986 Other lineage2.2.1 None
SRR13861369 Other lineage4.9 None
SRR2101492 Other lineage4.3.2.1 None
SRR13861705 Sensitive lineage4.9 None
SRR13861457 Other lineage4.9 None
SRR13861345 Other lineage4.9 None
SRR7236178 Other La1.8.1 None
SRR13861727 Other lineage4.9 None
SRR13861465 Other lineage4.9 None
SRR13861340 Other lineage4.9 None
ERR3275450 Other lineage4 None
ERR6149870 Other La1.8.2 None
ERR8774378 MDR-TB lineage2.2.1 None
SRR13861307 Other lineage4.9 None
SRR6982174 Sensitive lineage4.3.3 None
SRR13861497 HR-TB lineage4.9 None
SRR13861710 Other lineage4.9 None
SRR13861447 Other lineage4.9 None
SRR13861453 Other lineage4.9 None
ERR5863930 Pre-XDR-TB lineage2.2.1 None
SRR7240067 Other La1.8.1 None
ERR6149868 Other La1.8.2 None
SRR13861192 Other lineage4.9 None
SRR13861309 Other lineage4.9 None
SRR6856094 Other lineage2.2.1 None
SRR13861339 Other lineage4.9 None
SRR13861627 Other lineage4.9 None
SRR19612366 Other lineage4.5 None
SRR11972420 MDR-TB lineage2.2.1 None
SRR1792105 Other La1.8.1 None
ERR2229780 Other lineage4.9 None
SRR6152854 Other lineage4.1.2.1 None
SRR13861658 Other lineage4.9 None
SRR13861182 Other lineage4.9 None
ERR6201832 Other La1.2 None
ERR6198390 Other La1.2 None
DRR184644 HR-TB lineage2.2.1 None
SRR13861213 Other lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
SRR13861587 Other lineage4.9 None
SRR13861142 Other lineage4.9 None
SRR6397818 RR-TB lineage4.4.1.1 None
ERR3275567 Other lineage3 nl
SRR13861664 Other lineage4.9 None
SRR13861379 Other lineage4.9 None
SRR13861711 Other lineage4.9 None
SRR13861323 Other lineage4.9 None
SRR13861256 Other lineage4.9 None
ERR2041685 MDR-TB lineage2.2.1 None
ERR4822017 Sensitive lineage2.2.1 None
SRR13861576 Other lineage4.9 None
SRR13861331 Other lineage4.9 None
SRR1791918 Other La1.8.1 None
SRR13861147 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR13861720 Other lineage4.9 None
SRR13861531 Other lineage4.9 None
SRR13861481 Other lineage4.9 None
SRR13861314 Other lineage4.9 None
SRR6982140 Other lineage2.2.1.1 None
SRR7240068 Other La1.8.1 None
SRR13861624 Other lineage4.9 None
SRR13861157 Other lineage4.9 None
SRR7240064 Other La1.7.1 None
SRR13861579 Other lineage4.9 None
SRR13861523 Other lineage4.9 None
SRR11662640 MDR-TB lineage2.2.1 None
SRR6397644 Sensitive lineage4.4.1.2 None
ERR4814746 Other lineage2.2.1 gb
SRR13861584 Other lineage4.9 None
SRR5065440 Other lineage2.2.1.2 None
SRR13861574 Sensitive lineage4.9 None
ERR3797043 Sensitive lineage4.9 None
SRR6397406 Other lineage4.1.2.1 None
SRR13861617 Other lineage4.9 None
SRR13861555 Other lineage4.9 None
SRR13861362 Other lineage4.9 None
SRR13861164 Other lineage4.9 None
SRR13861717 Other lineage4.9 None
SRR13861734 Other lineage4.9 None
ERR2228873 Other lineage4.8 None
SRR13861377 Other lineage4.9 None
ERR2600442 MDR-TB lineage2.2.1 None
ERR7801178 Other lineage4.3.4.2.1 None
SRR13861281 Other lineage4.9 None
SRR13861554 Other lineage4.9 None
SRR13861426 Other lineage4.9 None
SRR5065527 Other lineage2.2.1 None
ERR6140667 Other La1.8.2 None
DRR184982 Other lineage2.2.1 None
SRR6152972 Other lineage2.2.1.1 None
ERR3275434 Other lineage4.1.2.1 nl
SRR13861559 Other lineage4.9 None
SRR13861694 Other lineage4.9 None
SRR18911138 Other lineage3 None
SRR13861568 Other lineage4.9 None
ERR6201843 Other La1.2 None
ERR2446433 Other lineage4.1.2.1 None
SRR13861693 Other lineage4.9 None
SRR13861397 HR-TB lineage4.9 None
DRR185024 Other lineage2.2.2 None
SRR13861649 Other lineage4.9 None
SRR6824357 Pre-XDR-TB lineage4.4.2 None
SRR13861143 RR-TB lineage4.9 None
SRR13861630 Other lineage4.9 None
SRR13861697 Other lineage4.9 None
SRR7240063 Other La1.7.1 None
SRR13861356 Other lineage4.9 None
SRR6397441 Other lineage4.5 None
ERR6140651 Other La1.8.2 None
ERR6198394 Other La1.2 None
SRR13861682 Sensitive lineage4.9 None
SRR13861580 Other lineage4.9 None
ERR6149875 Other La1.8.2 None
SRR13861556 Other lineage4.9 None
SRR13861207 Other lineage4.9 None
SRR7236253 Other La1.7.1 None
ERR2515191 Other lineage2.2.1 za
ERR036194 Other lineage4.6.1.2 None
SRR12199431 Other lineage4.3 None
SRR6153268 Other lineage2.2.1.1 ca
SRR13861150 Other lineage4.9 None
SRR7131220 Other lineage4.1.2.1 None
SRR13861211 HR-TB lineage4.9 None
SRR5341390 HR-TB lineage1.1.2 None
SRR13861162 Other lineage4.9 None
SRR13861370 Other lineage4.9 None
SRR13861735 Other lineage4.9 None
SRR7236372 Other La1.8.1 None
SRR6397721 Other lineage4.2.1.1 None
SRR6397771 Other lineage1.1.1.1 None
SRR13861387 Other lineage4.9 None
SRR13861446 Other lineage4.9 None
SRR8649122 Sensitive lineage4.7 None
SRR1791908 Other La1.8.1 None
SRR13861440 Other lineage4.9 None
SRR13861646 Other lineage4.9 None
SRR13861714 Other lineage4.9 None
ERR2228941 Other lineage4.8 None
SRR13861336 Other lineage4.9 None
ERR5863931 Pre-XDR-TB lineage2.2.1 None
SRR9971378 Pre-XDR-TB lineage4.1.1.3 None
SRR21240243 Sensitive lineage4.3.3 None
SRR2101662 Sensitive lineage4.3.3 None
SRR13861384 Other lineage4.9 None
SRR13861324 Other lineage4.9 None
SRR5341429 HR-TB lineage3.1.2.1 None
SRR13861499 Other lineage4.9 None
SRR13861394 Other lineage4.9 None
ERR2229336 Other lineage4.8 None
SRR13861258 Other lineage4.9 None
SRR7236216 Other La1.8.1 None
ERR2229033 Other lineage4.8 None
SRR13861626 Other lineage4.9 None
SRR13861297 Other lineage4.9 None
SRR13861244 Other lineage4.9 None
SRR6153042 Other lineage4.4.1.1 None
SRR13861648 Other lineage4.9 None
SRR13861373 Other lineage4.9 None
SRR13861680 Other lineage4.9 None
SRR13861353 Other lineage4.9 None