Rv0668 - c.2209C>T
Drug resistance types
12 Sensitive
4 RR-TB
76 HR-TB
7 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
46 Other
lineage Counts
| lineage | Count |
|---|---|
| 57 | |
| lineage4.1.1.3 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.2.1 | 15 |
| lineage2.2.1 | 8 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.8 | 1 |
| lineage4.9 | 22 |
| lineage3 | 2 |
| lineage4 | 2 |
| lineage1.1 | 1 |
| lineage3.1 | 2 |
| La2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.4 | 2 |
| La1.8.1 | 2 |
| lineage4.6.2.2 | 2 |
| lineage6.1.1 | 2 |
| lineage1.2.2.2 | 1 |
| lineage3.1.2 | 1 |
| lineage4.3.3 | 2 |
| La1.2 | 1 |
| lineage4.3.2 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage2.2.2 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage2 | 1 |
| lineage4.4.1.1 | 2 |
| lineage2.2.1.1 | 4 |
| lineage4.5 | 1 |
| lineage1.1.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage9;lineage3.1 | 1 |
| lineage4.1 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage3;lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 148 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675571 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR3275215 | Other | lineage4.1.2.1 | nl | ERR3275196 | Other | lineage2.2.1 | nl | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR2503474 | Sensitive | lineage4.2.1.1 | None | ERR2509673 | Other | lineage2.2.1 | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR2514327 | HR-TB | lineage4.8 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR1035138 | MDR-TB | None | SRR5341313 | HR-TB | None | SRR6046015 | Other | lineage4.9 | None | SRR5341470 | HR-TB | None | ERR278594 | HR-TB | None | ERR2446118 | Other | lineage4.1.2.1 | nl | ERR2693227 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6045233 | HR-TB | None | SRR6325442 | HR-TB | None | ERR2517489 | Sensitive | lineage4.1.2.1 | nl | SRR6325444 | HR-TB | None | SRR6046397 | Other | None | SRR6325447 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046644 | HR-TB | None | ERR294248 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR294266 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311081 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR323036 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323039 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311090 | HR-TB | None | SRR8217918 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323041 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323053 | HR-TB | None | SRR7796666 | Pre-XDR-TB | lineage2.2.1 | None | ERR323055 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR323063 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR3468544 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797043 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797016 | HR-TB | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3797083 | HR-TB | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4798504 | Other | lineage3 | None | ERR4188350 | HR-TB | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR6358837 | HR-TB | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6198317 | Other | La1.2 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR6358991 | HR-TB | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR736865 | HR-TB | None | ERR8976043 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987722 | HR-TB | None | ERR9882557 | Sensitive | lineage4.9 | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR069989 | HR-TB | lineage2 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR13861146 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1174897 | HR-TB | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR13423544 | Other | lineage4.5 | None | SRR13837637 | Sensitive | lineage4.9 | None | SRR13861224 | Sensitive | lineage4.9 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13861304 | Other | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861372 | Other | lineage4.9 | None | SRR13861261 | Sensitive | lineage4.9 | None | SRR13861305 | Other | lineage4.9 | None | SRR13861332 | Other | lineage4.9 | None | SRR13861447 | RR-TB | lineage4.9 | None | SRR13861434 | RR-TB | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | SRR13861510 | Other | lineage4.9 | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR1791696 | Other | La1.8.1 | None | ERR1035239 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR3675486 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR181744 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212123 | Other | None | SRR3675545 | HR-TB | None | ERR212034 | HR-TB | None | ERR212121 | HR-TB | None |
|---|
