Run ID: SRR25827418
Sample name:
Date: 2024-04-15T11:00:47.487456
Number of reads: 5550773
Percentage reads mapped: 91.88
Median coverage: 176.0
Strain: lineage3.1;lineage9
Spoligotype:
Drug-resistance: XDR-TB
Lineage | Family | RDs | Frequency |
---|---|---|---|
lineage3 | East-African-Indian | RD750 | 0.94 |
lineage9 | Lineage 9 | None | 0.18 |
La1.7.1 | M.bovis | None | 0.14 |
lineage3.1 | East-African-Indian | RD750 | 0.3 |
Drug | Resistance | Supporting mutations | WHO confidence | Comment |
---|---|---|---|---|
rifampicin | rpoB | p.Ser450Leu | Assoc w R | |
isoniazid | katG | p.Ser315Thr | Assoc w R | High-level resistance |
ethambutol | embB | p.Met306Val | Assoc w R | |
p.Ala356Val | Uncertain significance | Mutation from literature | ||
pyrazinamide | pncA | p.Cys14* | Assoc w R | |
streptomycin | rrs | n.462C>T | Uncertain significance | Mutation from literature |
n.906A>G | Uncertain significance | Mutation from literature | ||
gid | c.351delG | Assoc w R | ||
fluoroquinolones | ||||
moxifloxacin | gyrA | p.Asp94Gly | Assoc w R | High-level resistance |
ofloxacin | ||||
levofloxacin | gyrA | p.Asp94Gly | Assoc w R | |
ciprofloxacin | ||||
aminoglycosides | ||||
amikacin | ||||
capreomycin | ||||
kanamycin | ||||
cycloserine | ||||
ethionamide | ||||
clofazimine | mmpR5 | c.144dupC | Assoc w R | Can only confer resistance if genetically linked to a functional MmpL5 |
para-aminosalicylic_acid | ||||
delamanid | fbiC | c.643_645delCTGinsTA | Assoc w R - Interim | Confers DLM-PMD cross-resistance |
c.1018_1020delGGCinsCT | Assoc w R - Interim | Confers DLM-PMD cross-resistance | ||
c.1270_1272delCTGinsTT | Assoc w R - Interim | Confers DLM-PMD cross-resistance | ||
c.2401_2403delGAAinsAC | Assoc w R - Interim | Confers DLM-PMD cross-resistance | ||
fbiB | c.1150_1152delTTGinsCC | Assoc w R - Interim | Confers DLM-PMD cross-resistance | |
c.1288_1290delGACinsCG | Assoc w R - Interim | Confers DLM-PMD cross-resistance | ||
bedaquiline | mmpR5 | c.144dupC | Assoc w R | Can only confer resistance if genetically linked to a functional MmpL5 |
linezolid |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs | Confidence | Comment |
---|---|---|---|---|---|---|---|
gyrA | 7582 | p.Asp94Gly | missense_variant | 0.59 | levofloxacin | Assoc w R | |
moxifloxacin | Assoc w R | High-level resistance | |||||
rpoB | 761155 | p.Ser450Leu | missense_variant | 0.76 | rifampicin | Assoc w R | |
mmpR5 | 779130 | c.144dupC | frameshift_variant | 1.0 | bedaquiline | Assoc w R | Can only confer resistance if genetically linked to a functional MmpL5 |
clofazimine | Assoc w R | Can only confer resistance if genetically linked to a functional MmpL5 | |||||
fbiC | 1303573 | c.643_645delCTGinsTA | frameshift_variant&stop_gained | 0.6 | pretomanid | Assoc w R - Interim | Confers DLM-PMD cross-resistance |
delamanid | Assoc w R - Interim | Confers DLM-PMD cross-resistance | |||||
fbiC | 1303948 | c.1018_1020delGGCinsCT | frameshift_variant&missense_variant | 0.33 | pretomanid | Assoc w R - Interim | Confers DLM-PMD cross-resistance |
delamanid | Assoc w R - Interim | Confers DLM-PMD cross-resistance | |||||
fbiC | 1304200 | c.1270_1272delCTGinsTT | frameshift_variant&synonymous_variant | 0.38 | pretomanid | Assoc w R - Interim | Confers DLM-PMD cross-resistance |
delamanid | Assoc w R - Interim | Confers DLM-PMD cross-resistance | |||||
fbiC | 1305331 | c.2401_2403delGAAinsAC | frameshift_variant&missense_variant | 0.31 | pretomanid | Assoc w R - Interim | Confers DLM-PMD cross-resistance |
delamanid | Assoc w R - Interim | Confers DLM-PMD cross-resistance | |||||
rrs | 1472307 | n.462C>T | non_coding_transcript_exon_variant | 0.56 | streptomycin | Uncertain significance | Mutation from literature |
rrs | 1472751 | n.906A>G | non_coding_transcript_exon_variant | 0.47 | streptomycin | Uncertain significance | Mutation from literature |
katG | 2155168 | p.Ser315Thr | missense_variant | 1.0 | isoniazid | Assoc w R | High-level resistance |
pncA | 2289200 | p.Cys14* | stop_gained | 1.0 | pyrazinamide | Assoc w R | |
fbiB | 3642684 | c.1150_1152delTTGinsCC | frameshift_variant&missense_variant | 0.3 | pretomanid | Assoc w R - Interim | Confers DLM-PMD cross-resistance |
delamanid | Assoc w R - Interim | Confers DLM-PMD cross-resistance | |||||
fbiB | 3642822 | c.1288_1290delGACinsCG | frameshift_variant&missense_variant | 0.24 | pretomanid | Assoc w R - Interim | Confers DLM-PMD cross-resistance |
delamanid | Assoc w R - Interim | Confers DLM-PMD cross-resistance | |||||
embB | 4247429 | p.Met306Val | missense_variant | 0.57 | ethambutol | Assoc w R | |
embB | 4247580 | p.Ala356Val | missense_variant | 0.29 | ethambutol | Uncertain significance | Mutation from literature |
gid | 4407851 | c.351delG | frameshift_variant | 1.0 | streptomycin | Assoc w R |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs | Confidence |
---|---|---|---|---|---|---|
dnaA | 795 | c.795A>C | synonymous_variant | 0.29 | isoniazid | Not assoc w R - Interim |
dnaA | 805 | c.805_807delTTGinsCC | frameshift_variant&missense_variant | 0.32 | isoniazid | Uncertain significance |
dnaA | 822 | c.822A>G | synonymous_variant | 0.36 | isoniazid | |
dnaA | 828 | c.828T>C | synonymous_variant | 0.37 | isoniazid | Not assoc w R - Interim |
dnaA | 831 | c.831A>G | synonymous_variant | 0.37 | isoniazid | |
dnaA | 837 | c.837A>G | synonymous_variant | 0.38 | isoniazid | |
dnaA | 840 | c.840G>A | synonymous_variant | 0.38 | isoniazid | |
dnaA | 846 | c.846T>C | synonymous_variant | 0.39 | isoniazid | |
dnaA | 849 | c.849A>G | synonymous_variant | 0.39 | isoniazid | |
dnaA | 852 | c.852G>A | synonymous_variant | 0.38 | isoniazid | Not assoc w R - Interim |
dnaA | 876 | c.876C>G | synonymous_variant | 0.37 | isoniazid | |
dnaA | 882 | c.882C>T | synonymous_variant | 0.36 | isoniazid | |
dnaA | 885 | c.885T>C | synonymous_variant | 0.36 | isoniazid | |
dnaA | 897 | c.897A>G | synonymous_variant | 0.38 | isoniazid | |
dnaA | 909 | c.909A>C | synonymous_variant | 0.37 | isoniazid | Not assoc w R - Interim |
dnaA | 912 | c.912T>C | synonymous_variant | 0.37 | isoniazid | |
dnaA | 918 | c.918C>G | synonymous_variant | 0.4 | isoniazid | |
dnaA | 927 | c.927G>A | synonymous_variant | 0.4 | isoniazid | |
dnaA | 930 | c.930G>A | synonymous_variant | 0.38 | isoniazid | |
dnaA | 945 | c.945G>A | synonymous_variant | 0.41 | isoniazid | |
dnaA | 954 | c.954G>C | synonymous_variant | 0.4 | isoniazid | |
dnaA | 960 | c.960C>G | synonymous_variant | 0.37 | isoniazid | |
dnaA | 963 | c.963C>G | synonymous_variant | 0.36 | isoniazid | |
dnaA | 966 | c.966T>C | synonymous_variant | 0.36 | isoniazid | |
dnaA | 981 | c.981C>T | synonymous_variant | 0.41 | isoniazid | |
dnaA | 984 | c.984T>C | synonymous_variant | 0.41 | isoniazid | Not assoc w R - Interim |
dnaA | 990 | c.990A>C | synonymous_variant | 0.42 | isoniazid | |
dnaA | 993 | c.993A>G | synonymous_variant | 0.41 | isoniazid | |
dnaA | 996 | c.996A>T | synonymous_variant | 0.42 | isoniazid | |
dnaA | 999 | c.999C>A | synonymous_variant | 0.42 | isoniazid | |
dnaA | 1005 | c.1005G>A | synonymous_variant | 0.44 | isoniazid | Not assoc w R - Interim |
dnaA | 1014 | c.1014C>G | synonymous_variant | 0.46 | isoniazid | |
dnaA | 1024 | c.1024T>C | synonymous_variant | 0.47 | isoniazid | |
dnaA | 1050 | c.1050G>T | synonymous_variant | 0.49 | isoniazid | |
dnaA | 1056 | c.1056G>C | synonymous_variant | 0.49 | isoniazid | Not assoc w R - Interim |
dnaA | 1059 | c.1059C>G | synonymous_variant | 0.5 | isoniazid | |
dnaA | 1080 | c.1080C>G | synonymous_variant | 0.48 | isoniazid | |
dnaA | 1092 | c.1092T>C | synonymous_variant | 0.45 | isoniazid | Not assoc w R - Interim |
dnaA | 1101 | c.1101C>T | synonymous_variant | 0.42 | isoniazid | Not assoc w R - Interim |
dnaA | 1110 | c.1110T>C | synonymous_variant | 0.43 | isoniazid | |
dnaA | 1122 | c.1122C>T | synonymous_variant | 0.38 | isoniazid | |
dnaA | 1125 | c.1125G>C | synonymous_variant | 0.36 | isoniazid | |
dnaA | 1128 | c.1128G>C | synonymous_variant | 0.37 | isoniazid | |
dnaA | 1143 | c.1143G>C | synonymous_variant | 0.39 | isoniazid | |
dnaA | 1149 | c.1149C>T | synonymous_variant | 0.37 | isoniazid | |
dnaA | 1153 | c.1153T>C | synonymous_variant | 0.36 | isoniazid | |
dnaA | 1161 | c.1161A>G | synonymous_variant | 0.33 | isoniazid | |
dnaA | 1164 | c.1164A>G | synonymous_variant | 0.33 | isoniazid | |
dnaA | 1167 | c.1167A>G | synonymous_variant | 0.33 | isoniazid | Not assoc w R - Interim |
dnaA | 1176 | c.1176A>G | synonymous_variant | 0.34 | isoniazid | |
dnaA | 1191 | c.1191T>A | synonymous_variant | 0.29 | isoniazid | |
dnaA | 1197 | c.1197T>G | synonymous_variant | 0.29 | isoniazid | |
dnaA | 1204 | c.1204C>T | synonymous_variant | 0.27 | isoniazid | |
dnaA | 1215 | c.1215C>T | synonymous_variant | 0.23 | isoniazid | |
dnaA | 1220 | p.Asn407Ser | missense_variant | 0.24 | isoniazid | |
dnaA | 1224 | c.1224C>G | synonymous_variant | 0.27 | isoniazid | |
dnaA | 1230 | c.1230A>G | synonymous_variant | 0.28 | isoniazid | |
dnaA | 1237 | p.Ala413Ser | missense_variant | 0.29 | isoniazid | |
dnaA | 1242 | c.1242G>A | synonymous_variant | 0.3 | isoniazid | |
dnaA | 1254 | c.1254T>G | synonymous_variant | 0.33 | isoniazid | |
dnaA | 1278 | c.1278T>C | synonymous_variant | 0.31 | isoniazid | |
dnaA | 1281 | c.1281C>G | synonymous_variant | 0.31 | isoniazid | |
dnaA | 1291 | c.1291_1293delCTTinsTG | frameshift_variant&missense_variant | 0.31 | isoniazid | Uncertain significance |
dnaA | 1299 | c.1299G>C | synonymous_variant | 0.31 | isoniazid | Not assoc w R - Interim |
dnaA | 1308 | c.1308G>A | synonymous_variant | 0.31 | isoniazid | |
dnaA | 1323 | c.1323C>T | synonymous_variant | 0.3 | isoniazid | Not assoc w R - Interim |
dnaA | 1329 | c.1329A>G | synonymous_variant | 0.3 | isoniazid | |
dnaA | 1332 | c.1332A>G | synonymous_variant | 0.28 | isoniazid | |
dnaA | 1338 | c.1338T>C | synonymous_variant | 0.27 | isoniazid | |
dnaA | 1353 | c.1353T>C | synonymous_variant | 0.25 | isoniazid | |
dnaA | 1356 | c.1356T>C | synonymous_variant | 0.25 | isoniazid | Not assoc w R - Interim |
dnaA | 1371 | c.1371T>C | synonymous_variant | 0.21 | isoniazid | |
gyrB | 6091 | c.852G>C | synonymous_variant | 0.19 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6100 | c.861G>C | synonymous_variant | 0.19 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6127 | c.888G>C | synonymous_variant | 0.28 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6142 | c.903G>A | synonymous_variant | 0.32 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6151 | c.912C>T | synonymous_variant | 0.36 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6169 | c.930C>T | synonymous_variant | 0.39 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6175 | c.936G>A | synonymous_variant | 0.41 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6178 | c.939C>G | synonymous_variant | 0.41 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6205 | c.966C>T | synonymous_variant | 0.45 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6209 | c.970C>T | synonymous_variant | 0.44 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6214 | c.975G>A | synonymous_variant | 0.44 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6238 | c.999G>A | synonymous_variant | 0.39 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6242 | p.Arg335Lys | missense_variant | 0.37 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6250 | c.1011A>G | synonymous_variant | 0.39 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6253 | c.1014G>T | synonymous_variant | 0.4 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6265 | c.1026C>T | synonymous_variant | 0.4 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6280 | c.1041T>C | synonymous_variant | 0.39 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6286 | c.1047T>C | synonymous_variant | 0.36 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6295 | c.1056A>G | synonymous_variant | 0.33 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6307 | c.1068T>G | synonymous_variant | 0.28 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 6310 | c.-992G>C | upstream_gene_variant | 0.27 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6313 | c.-989C>T | upstream_gene_variant | 0.28 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 7060 | c.1821T>C | synonymous_variant | 0.3 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7066 | c.-236G>C | upstream_gene_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7072 | c.-230G>A | upstream_gene_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7078 | c.-224A>G | upstream_gene_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7093 | c.-209T>A | upstream_gene_variant | 0.34 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7108 | c.-194G>A | upstream_gene_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7114 | c.-188C>A | upstream_gene_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7120 | c.-182T>C | upstream_gene_variant | 0.31 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7123 | c.-179C>G | upstream_gene_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7129 | c.-173T>G | upstream_gene_variant | 0.29 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7132 | c.-170T>G | upstream_gene_variant | 0.28 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7136 | c.-166T>C | upstream_gene_variant | 0.27 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7141 | c.-161T>G | upstream_gene_variant | 0.26 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7147 | c.-155G>C | upstream_gene_variant | 0.29 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7150 | c.-152G>T | upstream_gene_variant | 0.28 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 7156 | c.1917C>T | synonymous_variant | 0.28 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7165 | c.-137C>G | upstream_gene_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 7166 | p.Ala643Ser | missense_variant | 0.23 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7171 | c.-131C>G | upstream_gene_variant | 0.23 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7362 | p.Glu21Gln | missense_variant | 0.99 | levofloxacin | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
gyrA | 7394 | c.93T>C | synonymous_variant | 0.27 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | ||||||
gyrA | 7418 | c.117C>T | synonymous_variant | 0.33 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7427 | c.126G>C | synonymous_variant | 0.38 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7442 | c.141G>C | synonymous_variant | 0.42 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7448 | c.147G>A | synonymous_variant | 0.43 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7451 | c.150C>G | synonymous_variant | 0.42 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7457 | c.156T>C | synonymous_variant | 0.42 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7463 | c.162G>C | synonymous_variant | 0.43 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7472 | c.171T>C | synonymous_variant | 0.45 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | ||||||
gyrA | 7475 | c.174A>G | synonymous_variant | 0.45 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7480 | p.Phe60Tyr | missense_variant | 0.45 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7484 | c.183T>C | synonymous_variant | 0.45 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7487 | c.186C>G | synonymous_variant | 0.45 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7490 | c.189C>G | synonymous_variant | 0.45 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7523 | c.222C>G | synonymous_variant | 0.5 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7532 | c.231T>G | synonymous_variant | 0.51 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7541 | c.240C>G | synonymous_variant | 0.49 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7547 | c.246C>T | synonymous_variant | 0.49 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7585 | p.Ser95Thr | missense_variant | 1.0 | levofloxacin | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
gyrA | 7587 | c.286C>T | synonymous_variant | 0.38 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7595 | c.294C>G | synonymous_variant | 0.34 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7601 | c.300C>G | synonymous_variant | 0.33 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7607 | c.306C>G | synonymous_variant | 0.31 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7619 | c.318C>G | synonymous_variant | 0.29 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7622 | c.321C>T | synonymous_variant | 0.28 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7631 | c.330G>C | synonymous_variant | 0.29 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7637 | c.336C>T | synonymous_variant | 0.26 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7643 | c.342C>T | synonymous_variant | 0.24 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | ||||||
gyrA | 7649 | c.348C>T | synonymous_variant | 0.23 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8177 | c.876A>C | synonymous_variant | 0.21 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8198 | c.897T>C | synonymous_variant | 0.28 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8207 | c.906T>C | synonymous_variant | 0.27 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8213 | c.912C>T | synonymous_variant | 0.27 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8219 | c.918T>C | synonymous_variant | 0.26 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8225 | c.924T>C | synonymous_variant | 0.25 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8231 | c.930C>G | synonymous_variant | 0.25 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8234 | c.933T>C | synonymous_variant | 0.25 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8237 | c.936A>G | synonymous_variant | 0.26 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8240 | c.939C>T | synonymous_variant | 0.26 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8252 | c.951G>A | synonymous_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8253 | p.Ile318Leu | missense_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8264 | c.963T>C | synonymous_variant | 0.22 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8294 | c.993T>C | synonymous_variant | 0.22 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8324 | c.1023T>C | synonymous_variant | 0.28 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8339 | c.1038A>G | synonymous_variant | 0.23 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8340 | p.Ala347Ser | missense_variant | 0.22 | levofloxacin | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
gyrA | 8354 | c.1053G>A | synonymous_variant | 0.31 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8360 | c.1059G>A | synonymous_variant | 0.32 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8367 | c.1066C>T | synonymous_variant | 0.33 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8387 | c.1086C>T | synonymous_variant | 0.34 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8391 | c.1090_1092delTATinsCC | frameshift_variant&missense_variant | 0.33 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8399 | c.1098T>C | synonymous_variant | 0.33 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8402 | p.Asp367Glu | missense_variant | 0.33 | levofloxacin | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
gyrA | 8408 | c.1107A>G | synonymous_variant | 0.34 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8420 | c.1119T>C | synonymous_variant | 0.37 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8423 | c.1122G>C | synonymous_variant | 0.37 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8426 | c.1125G>C | synonymous_variant | 0.38 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8432 | c.1131C>T | synonymous_variant | 0.38 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8453 | c.1152A>C | synonymous_variant | 0.33 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8462 | c.1161A>G | synonymous_variant | 0.31 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8471 | c.1170T>C | synonymous_variant | 0.29 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8480 | c.1179C>T | synonymous_variant | 0.28 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8486 | c.1185T>C | synonymous_variant | 0.29 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8633 | c.1332C>G | synonymous_variant | 0.21 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8666 | c.1365G>T | synonymous_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8672 | c.1371A>G | synonymous_variant | 0.3 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8690 | c.1389C>G | synonymous_variant | 0.32 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8693 | c.1392T>C | synonymous_variant | 0.32 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8711 | c.1410A>T | synonymous_variant | 0.29 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8714 | c.1413A>G | synonymous_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8717 | c.1416C>G | synonymous_variant | 0.29 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8726 | c.1425G>A | synonymous_variant | 0.28 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8729 | c.1428T>A | synonymous_variant | 0.28 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8730 | p.Gly477Lys | missense_variant | 0.27 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8752 | p.Ala484Gly | missense_variant | 0.29 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8762 | c.1461G>C | synonymous_variant | 0.28 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8767 | p.Arg489Lys | missense_variant | 0.27 | levofloxacin | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
gyrA | 8783 | c.1482G>T | synonymous_variant | 0.26 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8786 | c.1485T>C | synonymous_variant | 0.26 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8793 | p.Ile498Val | missense_variant | 0.27 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8810 | c.1509A>C | synonymous_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8825 | c.1524G>A | synonymous_variant | 0.22 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8852 | c.1551T>C | synonymous_variant | 0.32 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8858 | c.1557T>C | synonymous_variant | 0.34 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8867 | c.1566A>G | synonymous_variant | 0.35 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8870 | c.1569G>C | synonymous_variant | 0.36 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8897 | c.1596T>C | synonymous_variant | 0.44 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8903 | c.1602T>C | synonymous_variant | 0.45 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8912 | c.1611G>A | synonymous_variant | 0.45 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8918 | c.1617C>G | synonymous_variant | 0.46 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8924 | c.1623C>A | synonymous_variant | 0.47 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8930 | c.1629C>T | synonymous_variant | 0.46 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8939 | c.1638T>C | synonymous_variant | 0.46 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8942 | c.1641G>C | synonymous_variant | 0.46 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8946 | c.1645_1647delTTGinsCC | frameshift_variant&missense_variant | 0.46 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8966 | c.1665C>G | synonymous_variant | 0.46 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8967 | p.Ala556Arg | missense_variant | 0.46 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8983 | p.Cys561Ser | missense_variant | 0.45 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8987 | c.1686C>T | synonymous_variant | 0.45 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8998 | p.Leu566Trp | missense_variant | 0.46 | levofloxacin | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
gyrA | 9023 | c.1722A>T | synonymous_variant | 0.38 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9029 | c.1728T>G | synonymous_variant | 0.36 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9032 | c.1731T>C | synonymous_variant | 0.35 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9047 | c.1746C>T | synonymous_variant | 0.32 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R | |||||
gyrA | 9050 | p.Asp583Glu | missense_variant | 0.31 | levofloxacin | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
gyrA | 9051 | c.1750T>C | synonymous_variant | 0.32 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9056 | c.1755C>G | synonymous_variant | 0.32 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9065 | c.1764C>A | synonymous_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9068 | c.1767G>A | synonymous_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9080 | c.1779G>T | synonymous_variant | 0.31 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9089 | c.1788G>C | synonymous_variant | 0.32 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9099 | c.1798_1800delTTAinsCG | frameshift_variant&missense_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9104 | c.1803C>G | synonymous_variant | 0.29 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9107 | c.1806C>T | synonymous_variant | 0.3 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | ||||||
gyrA | 9119 | c.1818A>G | synonymous_variant | 0.32 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9125 | c.1824C>A | synonymous_variant | 0.32 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9143 | c.1842T>C | synonymous_variant | 0.28 | levofloxacin | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
gyrA | 9146 | c.1845C>T | synonymous_variant | 0.27 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | ||||||
gyrA | 9149 | c.1848C>T | synonymous_variant | 0.27 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9153 | p.Thr618Glu | missense_variant | 0.28 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9161 | c.1860C>G | synonymous_variant | 0.33 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9182 | c.1881T>G | synonymous_variant | 0.4 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9185 | c.1884C>G | synonymous_variant | 0.39 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9191 | c.1890G>C | synonymous_variant | 0.42 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9197 | c.1896G>T | synonymous_variant | 0.42 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9200 | c.1899A>G | synonymous_variant | 0.41 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9206 | c.1905C>G | synonymous_variant | 0.43 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9212 | c.1911G>C | synonymous_variant | 0.46 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9230 | c.1929T>C | synonymous_variant | 0.48 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9239 | c.1938C>G | synonymous_variant | 0.47 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9242 | c.1941A>G | synonymous_variant | 0.48 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9248 | c.1947G>C | synonymous_variant | 0.5 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9252 | p.Val651Ile | missense_variant | 0.49 | levofloxacin | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
gyrA | 9258 | c.1957C>T | synonymous_variant | 0.5 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9269 | c.1968C>T | synonymous_variant | 0.5 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9272 | c.1971C>T | synonymous_variant | 0.5 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9284 | c.1983T>G | synonymous_variant | 0.52 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9304 | p.Gly668Asp | missense_variant | 1.0 | levofloxacin | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
gyrA | 9311 | c.2010C>T | synonymous_variant | 0.54 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9312 | c.2011C>T | synonymous_variant | 0.55 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9323 | c.2022C>A | synonymous_variant | 0.55 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9335 | c.2034G>C | synonymous_variant | 0.57 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9374 | c.2073G>C | synonymous_variant | 0.52 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9377 | c.2076A>G | synonymous_variant | 0.51 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9383 | c.2082T>C | synonymous_variant | 0.52 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9386 | c.2085T>C | synonymous_variant | 0.51 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9395 | c.2094G>C | synonymous_variant | 0.5 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9419 | c.2118T>C | synonymous_variant | 0.46 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9420 | p.Ile707Ala | missense_variant | 0.47 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9431 | c.2130G>A | synonymous_variant | 0.46 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9441 | c.2140C>T | synonymous_variant | 0.41 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9449 | c.2148C>G | synonymous_variant | 0.36 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9452 | c.2151G>C | synonymous_variant | 0.35 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9455 | c.2154T>C | synonymous_variant | 0.35 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9464 | c.2163C>G | synonymous_variant | 0.31 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9467 | c.2166T>C | synonymous_variant | 0.31 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9476 | c.2175G>C | synonymous_variant | 0.31 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9485 | c.2184A>C | synonymous_variant | 0.28 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9488 | c.2187G>C | synonymous_variant | 0.27 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9497 | c.2196G>C | synonymous_variant | 0.26 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9503 | c.2202T>C | synonymous_variant | 0.23 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9508 | p.Ala736Gly | missense_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9518 | c.2217A>G | synonymous_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9521 | c.2220C>T | synonymous_variant | 0.25 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9536 | c.2235C>T | synonymous_variant | 0.26 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9542 | c.2241T>C | synonymous_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9545 | c.2244A>G | synonymous_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9548 | c.2247T>G | synonymous_variant | 0.25 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9551 | c.2250G>T | synonymous_variant | 0.25 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9557 | c.2256G>C | synonymous_variant | 0.24 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9572 | c.2271C>T | synonymous_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9575 | c.2274G>C | synonymous_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9578 | c.2277C>G | synonymous_variant | 0.25 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9585 | c.2284_2286delTTGinsCC | frameshift_variant&missense_variant | 0.25 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9590 | c.2289T>C | synonymous_variant | 0.27 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9593 | c.2292G>A | synonymous_variant | 0.28 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9626 | c.2325T>C | synonymous_variant | 0.27 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9629 | c.2328C>G | synonymous_variant | 0.26 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9630 | p.Val777Ile | missense_variant | 0.26 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9635 | c.2334T>C | synonymous_variant | 0.28 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9641 | c.2340C>G | synonymous_variant | 0.31 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9644 | c.2343T>C | synonymous_variant | 0.29 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9650 | c.2349G>C | synonymous_variant | 0.29 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9659 | c.2358C>G | synonymous_variant | 0.25 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9665 | c.2364A>G | synonymous_variant | 0.23 | levofloxacin | |
moxifloxacin | ||||||
Rv0010c | 13771 | c.-213T>C | upstream_gene_variant | 0.41 | isoniazid | |
Rv0010c | 13780 | c.-222C>G | upstream_gene_variant | 0.41 | isoniazid | |
Rv0010c | 13789 | c.-233_-231delCAAinsGG | upstream_gene_variant | 0.41 | isoniazid | |
Rv0010c | 13792 | c.-234G>T | upstream_gene_variant | 0.41 | isoniazid | |
Rv0010c | 13803 | c.-245A>C | upstream_gene_variant | 0.4 | isoniazid | |
Rv0010c | 13804 | c.-246C>G | upstream_gene_variant | 0.4 | isoniazid | |
Rv0010c | 13810 | c.-252A>G | upstream_gene_variant | 0.39 | isoniazid | |
Rv0010c | 13816 | c.-258C>G | upstream_gene_variant | 0.38 | isoniazid | |
Rv0010c | 13819 | c.-263_-261delCAAinsAT | upstream_gene_variant | 0.38 | isoniazid | |
Rv0010c | 13828 | c.-272_-270delATTinsGA | upstream_gene_variant | 0.37 | isoniazid | |
Rv0010c | 13834 | c.-276A>C | upstream_gene_variant | 0.4 | isoniazid | |
Rv0010c | 13839 | c.-281T>C | upstream_gene_variant | 0.42 | isoniazid | |
Rv0010c | 13852 | c.-294A>G | upstream_gene_variant | 0.43 | isoniazid | |
Rv0010c | 13864 | c.-306A>C | upstream_gene_variant | 0.42 | isoniazid | |
Rv0010c | 13878 | c.-320C>T | upstream_gene_variant | 0.34 | isoniazid | |
Rv0010c | 13891 | c.-335_-333delTCGinsGC | upstream_gene_variant | 0.27 | isoniazid | |
fgd1 | 491043 | c.261T>A | synonymous_variant | 0.28 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491058 | c.276C>G | synonymous_variant | 0.31 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491064 | c.282A>C | synonymous_variant | 0.31 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491073 | c.291C>T | synonymous_variant | 0.32 | clofazimine | Not assoc w R - Interim |
pretomanid | ||||||
delamanid | Not assoc w R - Interim | |||||
fgd1 | 491079 | c.297C>T | synonymous_variant | 0.31 | clofazimine | Not assoc w R - Interim |
pretomanid | ||||||
delamanid | Not assoc w R - Interim | |||||
fgd1 | 491082 | c.300T>C | synonymous_variant | 0.32 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491085 | c.303T>G | synonymous_variant | 0.32 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491091 | c.309T>C | synonymous_variant | 0.31 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491121 | c.339A>G | synonymous_variant | 0.3 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491136 | c.354C>T | synonymous_variant | 0.29 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491142 | c.360C>T | synonymous_variant | 0.29 | clofazimine | Not assoc w R - Interim |
pretomanid | ||||||
delamanid | Not assoc w R - Interim | |||||
fgd1 | 491388 | c.606C>G | synonymous_variant | 0.22 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491491 | p.Pro237Thr | missense_variant | 0.23 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491526 | c.744T>C | synonymous_variant | 0.21 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491542 | c.760T>C | synonymous_variant | 0.23 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491547 | c.765A>C | synonymous_variant | 0.24 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491550 | c.768T>C | synonymous_variant | 0.24 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491553 | c.771G>A | synonymous_variant | 0.24 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491601 | c.819T>C | synonymous_variant | 0.27 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491604 | c.822G>C | synonymous_variant | 0.27 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491610 | c.828A>C | synonymous_variant | 0.25 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491613 | c.831C>T | synonymous_variant | 0.25 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491616 | c.834A>G | synonymous_variant | 0.27 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491652 | c.870C>T | synonymous_variant | 0.3 | clofazimine | Not assoc w R - Interim |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491658 | c.876A>G | synonymous_variant | 0.27 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491661 | c.879C>G | synonymous_variant | 0.24 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491664 | c.882C>G | synonymous_variant | 0.23 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491673 | c.891A>C | synonymous_variant | 0.21 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491688 | c.906A>G | synonymous_variant | 0.2 | clofazimine | Not assoc w R - Interim |
pretomanid | ||||||
delamanid | Not assoc w R - Interim | |||||
fgd1 | 491694 | c.912C>T | synonymous_variant | 0.2 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491709 | c.927A>G | synonymous_variant | 0.21 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491712 | c.930T>C | synonymous_variant | 0.21 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491718 | c.936A>G | synonymous_variant | 0.21 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491742 | c.960T>C | synonymous_variant | 1.0 | clofazimine | Not assoc w R |
pretomanid | ||||||
delamanid | Not assoc w R - Interim | |||||
mshA | 574574 | c.-774A>G | upstream_gene_variant | 0.2 | ethionamide | |
isoniazid | ||||||
mshA | 574595 | c.-753A>G | upstream_gene_variant | 0.21 | ethionamide | |
isoniazid | ||||||
mshA | 574604 | c.-744C>G | upstream_gene_variant | 0.26 | ethionamide | |
isoniazid | ||||||
mshA | 574631 | c.-717C>G | upstream_gene_variant | 0.33 | ethionamide | |
isoniazid | ||||||
mshA | 574637 | c.-711C>G | upstream_gene_variant | 0.34 | ethionamide | |
isoniazid | ||||||
mshA | 574640 | c.-708G>A | upstream_gene_variant | 0.35 | ethionamide | |
isoniazid | ||||||
mshA | 574643 | c.-705C>T | upstream_gene_variant | 0.35 | ethionamide | |
isoniazid | ||||||
mshA | 574650 | c.-698A>C | upstream_gene_variant | 0.38 | ethionamide | |
isoniazid | ||||||
mshA | 574667 | c.-681G>T | upstream_gene_variant | 0.38 | ethionamide | |
isoniazid | ||||||
mshA | 574673 | c.-675A>G | upstream_gene_variant | 0.38 | ethionamide | |
isoniazid | ||||||
mshA | 574676 | c.-672G>C | upstream_gene_variant | 0.38 | ethionamide | |
isoniazid | ||||||
mshA | 574678 | c.-670G>C | upstream_gene_variant | 0.37 | ethionamide | |
isoniazid | ||||||
mshA | 574683 | c.-665T>C | upstream_gene_variant | 0.39 | ethionamide | |
isoniazid | Uncertain significance | |||||
mshA | 574688 | c.-660G>C | upstream_gene_variant | 0.42 | ethionamide | Uncertain significance |
isoniazid | Uncertain significance | |||||
mshA | 574694 | c.-654C>G | upstream_gene_variant | 0.44 | ethionamide | |
isoniazid | ||||||
mshA | 574718 | c.-630A>G | upstream_gene_variant | 0.4 | ethionamide | |
isoniazid | ||||||
mshA | 574721 | c.-627C>G | upstream_gene_variant | 0.39 | ethionamide | |
isoniazid | ||||||
mshA | 574731 | c.-617A>G | upstream_gene_variant | 0.4 | ethionamide | |
isoniazid | ||||||
mshA | 574742 | c.-606G>A | upstream_gene_variant | 0.41 | ethionamide | |
isoniazid | ||||||
mshA | 574763 | c.-585T>C | upstream_gene_variant | 0.31 | ethionamide | |
isoniazid | Uncertain significance | |||||
mshA | 574766 | c.-582T>C | upstream_gene_variant | 0.3 | ethionamide | |
isoniazid | Uncertain significance | |||||
mshA | 574769 | c.-579C>A | upstream_gene_variant | 0.3 | ethionamide | |
isoniazid | Uncertain significance | |||||
mshA | 574782 | c.-566C>G | upstream_gene_variant | 0.28 | ethionamide | |
isoniazid | ||||||
mshA | 574790 | c.-558C>G | upstream_gene_variant | 0.22 | ethionamide | |
isoniazid | ||||||
mshA | 574792 | c.-556T>C | upstream_gene_variant | 0.21 | ethionamide | |
isoniazid | ||||||
mshA | 574952 | c.-396A>G | upstream_gene_variant | 0.2 | ethionamide | |
isoniazid | ||||||
mshA | 574955 | c.-393A>C | upstream_gene_variant | 0.22 | ethionamide | |
isoniazid | ||||||
mshA | 574961 | c.-387T>C | upstream_gene_variant | 0.25 | ethionamide | |
isoniazid | Uncertain significance | |||||
mshA | 574970 | c.-378A>G | upstream_gene_variant | 0.29 | ethionamide | |
isoniazid | ||||||
mshA | 574979 | c.-369G>T | upstream_gene_variant | 0.29 | ethionamide | |
isoniazid | ||||||
mshA | 574980 | c.-368C>T | upstream_gene_variant | 0.29 | ethionamide | |
isoniazid | Uncertain significance | |||||
mshA | 575000 | c.-348C>G | upstream_gene_variant | 0.31 | ethionamide | |
isoniazid | ||||||
mshA | 575009 | c.-339T>C | upstream_gene_variant | 0.3 | ethionamide | |
isoniazid | ||||||
mshA | 575011 | c.-337G>A | upstream_gene_variant | 0.29 | ethionamide | |
isoniazid | ||||||
mshA | 575015 | c.-333G>C | upstream_gene_variant | 0.29 | ethionamide | |
isoniazid | ||||||
mshA | 575022 | c.-326C>T | upstream_gene_variant | 0.3 | ethionamide | |
isoniazid | ||||||
mshA | 575030 | c.-318T>C | upstream_gene_variant | 0.29 | ethionamide | |
isoniazid | ||||||
mshA | 575034 | c.-314_-312delTTAinsCG | upstream_gene_variant | 0.3 | ethionamide | |
isoniazid | ||||||
mshA | 575042 | c.-306T>C | upstream_gene_variant | 0.3 | ethionamide | |
isoniazid | ||||||
mshA | 575051 | c.-297A>G | upstream_gene_variant | 0.29 | ethionamide | Uncertain significance |
isoniazid | Uncertain significance | |||||
mshA | 575052 | c.-296G>C | upstream_gene_variant | 0.29 | ethionamide | |
isoniazid | ||||||
mshA | 575060 | c.-288G>C | upstream_gene_variant | 0.29 | ethionamide | |
isoniazid | ||||||
mshA | 575063 | c.-285T>C | upstream_gene_variant | 0.29 | ethionamide | |
isoniazid | ||||||
mshA | 575075 | c.-273T>C | upstream_gene_variant | 0.24 | ethionamide | |
isoniazid | Uncertain significance | |||||
mshA | 575695 | c.348C>G | synonymous_variant | 0.32 | ethionamide | |
isoniazid | Not assoc w R - Interim | |||||
mshA | 575705 | c.358T>C | synonymous_variant | 0.35 | ethionamide | |
isoniazid | ||||||
mshA | 575713 | c.366G>A | synonymous_variant | 0.38 | ethionamide | |
isoniazid | ||||||
mshA | 575720 | c.373C>T | synonymous_variant | 0.4 | ethionamide | |
isoniazid | ||||||
mshA | 575725 | c.378C>G | synonymous_variant | 0.41 | ethionamide | |
isoniazid | ||||||
mshA | 575734 | c.387T>G | synonymous_variant | 0.43 | ethionamide | |
isoniazid | ||||||
mshA | 575767 | c.420G>A | synonymous_variant | 0.49 | ethionamide | |
isoniazid | ||||||
mshA | 575770 | c.423G>C | synonymous_variant | 0.49 | ethionamide | |
isoniazid | ||||||
mshA | 575772 | p.Val142Ala | missense_variant | 0.5 | ethionamide | |
isoniazid | ||||||
mshA | 575782 | c.435G>T | synonymous_variant | 0.51 | ethionamide | Not assoc w R - Interim |
isoniazid | Not assoc w R - Interim | |||||
mshA | 575785 | c.438T>G | synonymous_variant | 0.51 | ethionamide | |
isoniazid | ||||||
mshA | 575786 | p.Tyr147His | missense_variant | 0.51 | ethionamide | |
isoniazid | ||||||
mshA | 575803 | c.456C>T | synonymous_variant | 0.53 | ethionamide | |
isoniazid | Not assoc w R - Interim | |||||
mshA | 575821 | c.474G>C | synonymous_variant | 0.52 | ethionamide | |
isoniazid | ||||||
mshA | 575842 | c.495G>C | synonymous_variant | 0.53 | ethionamide | |
isoniazid | ||||||
mshA | 575845 | c.498C>T | synonymous_variant | 0.52 | ethionamide | |
isoniazid | Not assoc w R - Interim | |||||
mshA | 575878 | c.531A>G | synonymous_variant | 0.48 | ethionamide | |
isoniazid | ||||||
mshA | 575893 | c.546C>G | synonymous_variant | 0.43 | ethionamide | |
isoniazid | ||||||
mshA | 575908 | c.561A>G | synonymous_variant | 0.39 | ethionamide | |
isoniazid | ||||||
mshA | 575909 | c.562C>T | synonymous_variant | 0.38 | ethionamide | |
isoniazid | ||||||
mshA | 575915 | p.Asp190His | missense_variant | 0.39 | ethionamide | |
isoniazid | ||||||
mshA | 575923 | c.576C>T | synonymous_variant | 0.38 | ethionamide | |
isoniazid | ||||||
mshA | 575924 | p.Gly193Thr | missense_variant | 0.37 | ethionamide | |
isoniazid | ||||||
mshA | 575947 | c.600G>C | synonymous_variant | 0.33 | ethionamide | |
isoniazid | ||||||
mshA | 575953 | c.606G>C | synonymous_variant | 0.31 | ethionamide | |
isoniazid | ||||||
mshA | 575956 | c.609G>A | synonymous_variant | 0.3 | ethionamide | |
isoniazid | ||||||
mshA | 575965 | c.618C>T | synonymous_variant | 0.3 | ethionamide | |
isoniazid | ||||||
ccsA | 619507 | c.-384A>G | upstream_gene_variant | 0.37 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619528 | c.-363C>G | upstream_gene_variant | 0.34 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619531 | c.-360T>C | upstream_gene_variant | 0.34 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619532 | c.-359C>G | upstream_gene_variant | 0.34 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619537 | c.-354A>G | upstream_gene_variant | 0.34 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619544 | c.-347A>C | upstream_gene_variant | 0.34 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619549 | c.-342C>T | upstream_gene_variant | 0.32 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619552 | c.-338_-330delGGCCCGGCG | upstream_gene_variant | 0.34 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619563 | c.-328C>A | upstream_gene_variant | 0.32 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619573 | c.-318G>C | upstream_gene_variant | 0.34 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619579 | c.-312G>C | upstream_gene_variant | 0.33 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619591 | c.-300G>C | upstream_gene_variant | 0.34 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619627 | c.-264C>A | upstream_gene_variant | 0.23 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619633 | c.-258G>A | upstream_gene_variant | 0.22 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620166 | c.276G>C | synonymous_variant | 0.25 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620173 | c.283_285delGTCinsAT | frameshift_variant&missense_variant | 0.27 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620187 | c.297C>T | synonymous_variant | 0.31 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620197 | p.Gln103Met | missense_variant | 0.32 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620226 | c.336G>A | synonymous_variant | 0.47 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620254 | c.364_366delCTCinsTG | frameshift_variant&missense_variant | 0.5 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620257 | p.Ile123Val | missense_variant | 0.5 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620265 | c.375C>T | synonymous_variant | 0.5 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620269 | p.Val127Ile | missense_variant | 0.5 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620275 | c.385C>T | synonymous_variant | 0.51 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620280 | c.390C>T | synonymous_variant | 0.5 | capreomycin | Not assoc w R - Interim |
amikacin | Not assoc w R - Interim | |||||
kanamycin | Not assoc w R - Interim | |||||
ccsA | 620283 | c.393T>C | synonymous_variant | 0.5 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620284 | p.Ala132Pro | missense_variant | 0.5 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620288 | p.Arg133Gln | missense_variant | 0.51 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620295 | c.405G>C | synonymous_variant | 0.52 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620316 | c.426G>C | synonymous_variant | 0.47 | capreomycin | |
amikacin | Not assoc w R - Interim | |||||
kanamycin | Not assoc w R - Interim | |||||
ccsA | 620317 | c.427_429delGTCinsCT | frameshift_variant&missense_variant | 0.46 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620331 | c.441C>T | synonymous_variant | 0.49 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620332 | c.442C>T | synonymous_variant | 0.49 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620340 | c.450C>G | synonymous_variant | 0.5 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620367 | c.477T>C | synonymous_variant | 0.41 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620373 | c.483C>G | synonymous_variant | 0.37 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620379 | c.489G>A | synonymous_variant | 0.35 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620385 | c.495G>C | synonymous_variant | 0.34 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620388 | c.498A>G | synonymous_variant | 0.31 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620415 | c.525T>C | synonymous_variant | 0.27 | capreomycin | Not assoc w R - Interim |
amikacin | Not assoc w R - Interim | |||||
kanamycin | Not assoc w R - Interim | |||||
ccsA | 620427 | c.537C>A | synonymous_variant | 0.28 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620436 | c.546T>C | synonymous_variant | 0.25 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620439 | c.549T>G | synonymous_variant | 0.25 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620442 | c.552G>A | synonymous_variant | 0.25 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620445 | c.555A>G | synonymous_variant | 0.25 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620598 | c.708C>G | synonymous_variant | 0.2 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620604 | c.714C>G | synonymous_variant | 0.22 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620607 | c.717T>G | synonymous_variant | 0.22 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620613 | c.723C>T | synonymous_variant | 0.23 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620619 | c.729G>A | synonymous_variant | 0.23 | capreomycin | Not assoc w R - Interim |
amikacin | Not assoc w R - Interim | |||||
kanamycin | Not assoc w R - Interim | |||||
ccsA | 620631 | c.741T>G | synonymous_variant | 0.23 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620661 | c.771C>G | synonymous_variant | 0.25 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620676 | c.786C>T | synonymous_variant | 0.23 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
Rv0565c | 656299 | p.Thr391Val | missense_variant | 0.25 | ethionamide | |
Rv0565c | 656301 | c.1170C>T | synonymous_variant | 0.25 | ethionamide | |
Rv0565c | 656304 | c.1167T>C | synonymous_variant | 0.26 | ethionamide | |
Rv0565c | 656310 | c.1161T>C | synonymous_variant | 0.27 | ethionamide | |
Rv0565c | 656358 | c.1113T>C | synonymous_variant | 0.29 | ethionamide | Not assoc w R - Interim |
Rv0565c | 656364 | c.1107T>C | synonymous_variant | 0.28 | ethionamide | |
Rv0565c | 656367 | p.Arg368Thr | missense_variant | 0.27 | ethionamide | |
Rv0565c | 656370 | c.1101T>C | synonymous_variant | 0.27 | ethionamide | |
Rv0565c | 656373 | c.1098C>T | synonymous_variant | 0.28 | ethionamide | |
Rv0565c | 656379 | p.Glu364Asp | missense_variant | 0.31 | ethionamide | |
Rv0565c | 656402 | p.Ala357Thr | missense_variant | 0.28 | ethionamide | |
Rv0565c | 656406 | c.1065G>C | synonymous_variant | 0.28 | ethionamide | |
Rv0565c | 656415 | c.1056G>C | synonymous_variant | 0.26 | ethionamide | |
Rv0565c | 656418 | c.1053A>G | synonymous_variant | 0.25 | ethionamide | |
Rv0565c | 656423 | c.1048T>C | synonymous_variant | 0.24 | ethionamide | |
Rv0565c | 656436 | c.1035C>G | synonymous_variant | 0.23 | ethionamide | |
Rv0565c | 656448 | c.1023T>C | synonymous_variant | 0.2 | ethionamide | |
Rv0565c | 657081 | c.390G>A | synonymous_variant | 1.0 | ethionamide | Not assoc w R - Interim |
Rv0565c | 657233 | p.Ile80Val | missense_variant | 0.21 | ethionamide | |
Rv0565c | 657240 | p.Glu77Asp | missense_variant | 0.23 | ethionamide | |
Rv0565c | 657264 | c.207T>C | synonymous_variant | 0.21 | ethionamide | |
Rv0565c | 657267 | c.204G>C | synonymous_variant | 0.22 | ethionamide | |
hadA | 731687 | c.-243G>A | upstream_gene_variant | 0.32 | isoniazid | |
hadA | 731689 | c.-241A>G | upstream_gene_variant | 0.31 | isoniazid | |
hadA | 731692 | c.-237_-236delCT | upstream_gene_variant | 0.32 | isoniazid | |
hadA | 731698 | c.-232_-231insTGACACCTGATTTG | upstream_gene_variant | 0.31 | isoniazid | |
hadA | 731708 | c.-222G>C | upstream_gene_variant | 0.33 | isoniazid | |
hadA | 731710 | c.-220A>T | upstream_gene_variant | 0.33 | isoniazid | |
hadA | 731711 | c.-219T>C | upstream_gene_variant | 0.33 | isoniazid | |
hadA | 731729 | c.-201C>T | upstream_gene_variant | 0.39 | isoniazid | |
hadA | 731753 | c.-177A>C | upstream_gene_variant | 0.37 | isoniazid | |
hadA | 731756 | c.-174C>T | upstream_gene_variant | 0.35 | isoniazid | |
hadA | 731789 | c.-141A>G | upstream_gene_variant | 0.3 | isoniazid | |
hadA | 731831 | c.-99G>A | upstream_gene_variant | 0.36 | isoniazid | |
hadA | 731839 | c.-91_-90delCGinsGC | upstream_gene_variant | 0.35 | isoniazid | |
hadA | 731849 | c.-81C>A | upstream_gene_variant | 0.37 | isoniazid | |
hadA | 731852 | c.-78A>G | upstream_gene_variant | 0.36 | isoniazid | |
hadA | 731876 | c.-54G>T | upstream_gene_variant | 0.31 | isoniazid | |
hadA | 731879 | c.-51A>G | upstream_gene_variant | 0.31 | isoniazid | |
hadA | 731881 | c.-49C>T | upstream_gene_variant | 0.3 | isoniazid | |
hadA | 731882 | c.-48G>C | upstream_gene_variant | 0.31 | isoniazid | |
hadA | 731883 | c.-47C>A | upstream_gene_variant | 0.31 | isoniazid | |
hadA | 731891 | c.-39C>T | upstream_gene_variant | 0.3 | isoniazid | Uncertain significance |
hadA | 731899 | c.-31T>C | upstream_gene_variant | 0.3 | isoniazid | |
hadA | 731900 | c.-30G>A | upstream_gene_variant | 0.29 | isoniazid | |
hadA | 731902 | c.-28T>A | upstream_gene_variant | 0.3 | isoniazid | |
hadA | 731903 | c.-27G>C | upstream_gene_variant | 0.3 | isoniazid | |
hadA | 731925 | c.-5C>G | upstream_gene_variant | 0.28 | isoniazid | |
hadA | 731935 | c.6G>C | synonymous_variant | 0.24 | isoniazid | |
hadA | 732308 | p.Val127Ile | missense_variant | 0.23 | isoniazid | |
hadA | 732321 | p.Glu131Ala | missense_variant | 0.22 | isoniazid | |
hadA | 732329 | c.400_402delCTCinsAT | frameshift_variant&missense_variant | 0.23 | isoniazid | Uncertain significance |
hadA | 732346 | c.417T>C | synonymous_variant | 0.29 | isoniazid | |
hadA | 732370 | c.441C>T | synonymous_variant | 0.37 | isoniazid | |
hadA | 732376 | c.447T>C | synonymous_variant | 0.36 | isoniazid | |
hadA | 732378 | c.450_452dupAGA | disruptive_inframe_insertion | 0.37 | isoniazid | |
nusG | 734337 | c.84G>C | synonymous_variant | 0.21 | rifampicin | |
nusG | 734347 | p.Val32Leu | missense_variant | 0.22 | rifampicin | |
nusG | 734352 | c.99T>C | synonymous_variant | 0.23 | rifampicin | |
nusG | 734355 | c.102G>A | synonymous_variant | 0.22 | rifampicin | |
nusG | 734358 | c.105C>G | synonymous_variant | 0.24 | rifampicin | |
nusG | 734370 | c.117A>G | synonymous_variant | 0.3 | rifampicin | |
nusG | 734376 | c.123G>A | synonymous_variant | 0.33 | rifampicin | |
nusG | 734394 | c.141C>G | synonymous_variant | 0.34 | rifampicin | |
nusG | 734409 | c.156T>G | synonymous_variant | 0.3 | rifampicin | |
nusG | 734415 | c.162C>A | synonymous_variant | 0.3 | rifampicin | |
nusG | 734418 | c.165C>T | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
nusG | 734421 | c.168A>G | synonymous_variant | 0.3 | rifampicin | |
nusG | 734424 | c.171G>T | synonymous_variant | 0.31 | rifampicin | |
nusG | 734436 | c.183G>A | synonymous_variant | 0.36 | rifampicin | |
nusG | 734439 | c.186C>G | synonymous_variant | 0.35 | rifampicin | |
nusG | 734442 | c.189G>A | synonymous_variant | 0.37 | rifampicin | |
nusG | 734451 | c.198G>C | synonymous_variant | 0.39 | rifampicin | |
nusG | 734457 | c.204C>T | synonymous_variant | 0.4 | rifampicin | |
nusG | 734460 | c.207G>C | synonymous_variant | 0.4 | rifampicin | |
nusG | 734532 | c.279A>G | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
nusG | 734535 | c.282C>T | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
nusG | 734538 | c.285C>T | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
nusG | 734541 | c.288A>G | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
nusG | 734559 | c.306T>C | synonymous_variant | 0.26 | rifampicin | |
nusG | 734565 | c.312G>A | synonymous_variant | 0.26 | rifampicin | |
nusG | 734574 | c.321C>G | synonymous_variant | 0.23 | rifampicin | |
nusG | 734829 | c.576C>G | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
nusG | 734841 | c.588G>A | synonymous_variant | 0.35 | rifampicin | |
nusG | 734844 | c.591G>T | synonymous_variant | 0.35 | rifampicin | |
nusG | 734850 | c.597C>G | synonymous_variant | 0.36 | rifampicin | |
nusG | 734853 | c.600A>G | synonymous_variant | 0.36 | rifampicin | |
nusG | 734862 | c.609C>G | synonymous_variant | 0.38 | rifampicin | |
nusG | 734868 | c.615C>T | synonymous_variant | 0.39 | rifampicin | |
nusG | 734895 | c.642A>G | synonymous_variant | 0.43 | rifampicin | |
nusG | 734910 | c.657C>G | synonymous_variant | 0.47 | rifampicin | |
nusG | 734940 | c.687G>A | synonymous_variant | 0.52 | rifampicin | |
nusG | 734950 | p.Gly233Ser | missense_variant | 0.52 | rifampicin | |
nusG | 734955 | c.702A>G | synonymous_variant | 0.52 | rifampicin | |
rpoB | 759746 | c.-61C>T | upstream_gene_variant | 0.96 | rifampicin | Not assoc w R |
rpoB | 759991 | p.Pro62Gln | missense_variant | 0.21 | rifampicin | |
rpoB | 760040 | c.234T>C | synonymous_variant | 0.21 | rifampicin | |
rpoB | 760046 | c.240G>C | synonymous_variant | 0.21 | rifampicin | |
rpoB | 760070 | c.264T>G | synonymous_variant | 0.23 | rifampicin | |
rpoB | 760088 | c.282C>G | synonymous_variant | 0.23 | rifampicin | |
rpoB | 760091 | c.285G>C | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
rpoB | 760101 | c.295T>C | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoB | 760106 | c.300G>T | synonymous_variant | 0.27 | rifampicin | |
rpoB | 760112 | c.306T>C | synonymous_variant | 0.26 | rifampicin | |
rpoB | 760118 | c.312T>C | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoB | 760121 | c.315T>C | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoB | 760130 | p.Asp108Glu | missense_variant | 0.29 | rifampicin | Uncertain significance |
rpoB | 760139 | c.333A>G | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoB | 760181 | c.375T>C | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoB | 760184 | c.378A>G | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoB | 760196 | c.390C>G | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoB | 760199 | c.393C>T | synonymous_variant | 0.43 | rifampicin | |
rpoB | 760223 | c.417T>C | synonymous_variant | 0.49 | rifampicin | |
rpoB | 760235 | c.429T>C | synonymous_variant | 0.52 | rifampicin | Not assoc w R - Interim |
rpoB | 760241 | c.435G>C | synonymous_variant | 0.51 | rifampicin | |
rpoB | 760244 | c.438G>C | synonymous_variant | 0.5 | rifampicin | Not assoc w R - Interim |
rpoB | 760253 | c.447T>C | synonymous_variant | 0.52 | rifampicin | Not assoc w R - Interim |
rpoB | 760262 | c.456G>C | synonymous_variant | 0.51 | rifampicin | |
rpoB | 760283 | c.477G>C | synonymous_variant | 0.5 | rifampicin | Not assoc w R - Interim |
rpoB | 760298 | c.492G>C | synonymous_variant | 0.52 | rifampicin | Not assoc w R - Interim |
rpoB | 760328 | c.522G>C | synonymous_variant | 0.52 | rifampicin | |
rpoB | 760340 | c.534G>T | synonymous_variant | 0.53 | rifampicin | Not assoc w R - Interim |
rpoB | 760361 | c.555T>C | synonymous_variant | 0.5 | rifampicin | Not assoc w R - Interim |
rpoB | 760376 | p.Asp190Glu | missense_variant | 0.49 | rifampicin | Uncertain significance |
rpoB | 760403 | c.597C>T | synonymous_variant | 0.46 | rifampicin | Not assoc w R - Interim |
rpoB | 760406 | c.600G>A | synonymous_variant | 0.46 | rifampicin | |
rpoB | 760418 | c.612G>C | synonymous_variant | 0.47 | rifampicin | Not assoc w R - Interim |
rpoB | 760424 | c.618C>G | synonymous_variant | 0.47 | rifampicin | Not assoc w R - Interim |
rpoB | 760430 | c.624T>C | synonymous_variant | 0.47 | rifampicin | Not assoc w R - Interim |
rpoB | 760454 | c.648C>G | synonymous_variant | 0.44 | rifampicin | |
rpoB | 760457 | c.651C>T | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoB | 760463 | c.657C>A | synonymous_variant | 0.46 | rifampicin | |
rpoB | 760475 | c.669A>G | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoB | 760481 | c.675G>C | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoB | 760484 | c.678A>G | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoB | 760490 | c.684C>G | synonymous_variant | 0.4 | rifampicin | |
rpoB | 760508 | c.702G>A | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoB | 760521 | p.Ser239Gly | missense_variant | 0.36 | rifampicin | |
rpoB | 760532 | c.726T>C | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoB | 760533 | p.Val243Thr | missense_variant | 0.33 | rifampicin | |
rpoB | 760547 | c.741G>A | synonymous_variant | 0.3 | rifampicin | |
rpoB | 760563 | p.Arg253Met | missense_variant | 0.24 | rifampicin | Uncertain significance |
rpoB | 760601 | c.795C>T | synonymous_variant | 0.21 | rifampicin | |
rpoB | 760646 | c.840C>G | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
rpoB | 760655 | c.849A>G | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoB | 760661 | c.855A>C | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoB | 760674 | c.868T>C | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoB | 760679 | c.873A>G | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoB | 760683 | c.877T>C | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoB | 760703 | c.897C>G | synonymous_variant | 0.38 | rifampicin | |
rpoB | 760721 | c.915C>T | synonymous_variant | 0.42 | rifampicin | |
rpoB | 760724 | c.918T>C | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoB | 760730 | c.924T>C | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoB | 760757 | c.951T>C | synonymous_variant | 0.42 | rifampicin | |
rpoB | 760759 | p.Val318Ala | missense_variant | 0.41 | rifampicin | |
rpoB | 760763 | c.957C>T | synonymous_variant | 0.41 | rifampicin | |
rpoB | 760769 | c.963C>G | synonymous_variant | 0.42 | rifampicin | |
rpoB | 760784 | c.978G>A | synonymous_variant | 0.4 | rifampicin | |
rpoB | 760790 | c.984C>A | synonymous_variant | 0.39 | rifampicin | |
rpoB | 760805 | c.999G>C | synonymous_variant | 0.38 | rifampicin | |
rpoB | 760811 | c.1005C>G | synonymous_variant | 0.37 | rifampicin | |
rpoB | 760820 | c.1014T>C | synonymous_variant | 0.36 | rifampicin | |
rpoB | 760826 | c.1020C>T | synonymous_variant | 0.36 | rifampicin | |
rpoB | 760830 | c.1024T>C | synonymous_variant | 0.35 | rifampicin | Not assoc w R - Interim |
rpoB | 760845 | p.Thr347Pro | missense_variant | 0.29 | rifampicin | |
rpoB | 760848 | p.Thr348Ser | missense_variant | 0.27 | rifampicin | |
rpoB | 760856 | c.1050C>T | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoB | 760859 | c.1053T>C | synonymous_variant | 0.26 | rifampicin | |
rpoB | 760925 | c.1119T>C | synonymous_variant | 0.19 | rifampicin | |
rpoB | 760934 | c.1128C>T | synonymous_variant | 0.2 | rifampicin | |
rpoB | 760946 | c.1140A>G | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
rpoB | 760982 | c.1176G>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoB | 760985 | c.1179G>C | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoB | 760994 | c.1188G>A | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoB | 761006 | c.1200C>G | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoB | 761015 | c.1209G>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoB | 761021 | c.1215G>C | synonymous_variant | 0.31 | rifampicin | |
rpoB | 761024 | c.1218C>T | synonymous_variant | 0.31 | rifampicin | |
rpoB | 761027 | c.1221A>G | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoB | 761030 | c.1224G>C | synonymous_variant | 0.32 | rifampicin | |
rpoB | 761037 | c.1231T>C | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoB | 761051 | c.1245G>T | synonymous_variant | 0.35 | rifampicin | Not assoc w R - Interim |
rpoB | 761097 | c.1291_1293delAGCinsTCG | synonymous_variant | 0.25 | rifampicin | |
rpoB | 761102 | c.1296A>G | synonymous_variant | 0.25 | rifampicin | |
rpoB | 761124 | c.1318C>T | synonymous_variant | 0.26 | rifampicin | |
rpoB | 761132 | c.1326G>T | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoB | 761133 | c.1327T>C | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoB | 761150 | c.1344A>G | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoB | 761159 | c.1353G>C | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoB | 761168 | c.1362C>G | synonymous_variant | 0.24 | rifampicin | |
rpoB | 761180 | c.1374A>G | synonymous_variant | 0.25 | rifampicin | |
rpoB | 761189 | c.1383T>C | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoB | 761207 | c.1401C>T | synonymous_variant | 0.31 | rifampicin | |
rpoB | 761249 | c.1443A>G | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoB | 761252 | c.1446C>T | synonymous_variant | 0.23 | rifampicin | |
rpoB | 761255 | c.1449T>G | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoB | 761261 | c.1455G>T | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoB | 761264 | c.1458C>G | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
rpoB | 761537 | c.1731C>G | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
rpoB | 761558 | c.1752C>A | synonymous_variant | 0.24 | rifampicin | |
rpoB | 761561 | c.1755C>G | synonymous_variant | 0.25 | rifampicin | |
rpoB | 761564 | c.1758G>C | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoB | 761570 | c.1764T>C | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoB | 761573 | c.1767C>G | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoB | 761579 | c.1773G>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoB | 761600 | c.1794T>C | synonymous_variant | 0.29 | rifampicin | |
rpoB | 761606 | c.1800C>G | synonymous_variant | 0.28 | rifampicin | |
rpoB | 761612 | c.1806G>T | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoB | 761615 | c.1809A>C | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoB | 761636 | c.1830G>T | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoB | 761645 | c.1839C>G | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoB | 761648 | c.1842T>C | synonymous_variant | 0.24 | rifampicin | |
rpoB | 761657 | c.1851C>G | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoB | 761669 | c.1863C>A | synonymous_variant | 0.28 | rifampicin | |
rpoB | 761675 | c.1869G>C | synonymous_variant | 0.28 | rifampicin | |
rpoB | 761682 | c.1876C>T | synonymous_variant | 0.31 | rifampicin | |
rpoB | 761687 | c.1881C>T | synonymous_variant | 0.29 | rifampicin | |
rpoB | 761720 | c.1914C>G | synonymous_variant | 0.33 | rifampicin | |
rpoB | 761723 | c.1917_1919delAGAinsG | frameshift_variant&synonymous_variant | 0.33 | rifampicin | |
rpoB | 761732 | c.1926C>G | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoB | 761735 | c.1929C>G | synonymous_variant | 0.32 | rifampicin | |
rpoB | 761744 | c.1938G>A | synonymous_variant | 0.33 | rifampicin | |
rpoB | 761747 | c.1941G>C | synonymous_variant | 0.34 | rifampicin | |
rpoB | 761750 | c.1944G>C | synonymous_variant | 0.35 | rifampicin | |
rpoB | 761765 | c.1959T>C | synonymous_variant | 0.36 | rifampicin | |
rpoB | 761772 | p.His656Ala | missense_variant | 0.34 | rifampicin | |
rpoB | 761778 | p.Asn658Asp | missense_variant | 0.33 | rifampicin | |
rpoB | 761791 | p.Arg662His | missense_variant | 0.33 | rifampicin | |
rpoB | 761813 | c.2007T>C | synonymous_variant | 0.34 | rifampicin | |
rpoB | 761819 | c.2013G>T | synonymous_variant | 0.35 | rifampicin | |
rpoB | 761834 | c.2028T>C | synonymous_variant | 0.32 | rifampicin | |
rpoB | 761837 | c.2031C>T | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoB | 761848 | p.Cys681Ser | missense_variant | 0.28 | rifampicin | |
rpoB | 761852 | c.2046C>G | synonymous_variant | 0.28 | rifampicin | |
rpoB | 761864 | c.2058G>T | synonymous_variant | 0.33 | rifampicin | |
rpoB | 761867 | c.2061C>A | synonymous_variant | 0.33 | rifampicin | |
rpoB | 761870 | c.2064C>T | synonymous_variant | 0.33 | rifampicin | |
rpoB | 761882 | c.2076C>A | synonymous_variant | 0.37 | rifampicin | |
rpoB | 761885 | c.2079T>C | synonymous_variant | 0.39 | rifampicin | |
rpoB | 761909 | c.2103T>C | synonymous_variant | 0.44 | rifampicin | |
rpoB | 761912 | c.2106T>C | synonymous_variant | 0.44 | rifampicin | |
rpoB | 761915 | p.Asp703Glu | missense_variant | 0.43 | rifampicin | |
rpoB | 761916 | p.Asp704Asn | missense_variant | 0.44 | rifampicin | |
rpoB | 761921 | c.2115C>T | synonymous_variant | 0.45 | rifampicin | |
rpoB | 761954 | c.2148C>G | synonymous_variant | 0.52 | rifampicin | Not assoc w R - Interim |
rpoB | 762011 | c.2205G>C | synonymous_variant | 0.49 | rifampicin | Not assoc w R - Interim |
rpoB | 762053 | c.2247T>C | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoB | 762062 | c.2256T>C | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoB | 762080 | c.2274G>C | synonymous_variant | 0.34 | rifampicin | |
rpoB | 762083 | c.2277T>C | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoB | 762086 | c.2280G>C | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoB | 762101 | c.2295C>G | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoB | 762110 | c.2304G>T | synonymous_variant | 0.31 | rifampicin | |
rpoB | 762114 | p.Ile770Val | missense_variant | 0.29 | rifampicin | Uncertain significance |
rpoB | 762131 | c.2325C>G | synonymous_variant | 0.3 | rifampicin | |
rpoB | 762140 | c.2334G>C | synonymous_variant | 0.29 | rifampicin | |
rpoB | 762143 | c.2337T>C | synonymous_variant | 0.28 | rifampicin | |
rpoB | 762149 | c.2343G>A | synonymous_variant | 0.29 | rifampicin | |
rpoB | 762158 | c.2352G>C | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoB | 762167 | c.2361T>C | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoB | 762185 | c.2379G>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoB | 762218 | c.2412T>C | synonymous_variant | 0.37 | rifampicin | |
rpoB | 762249 | c.2443C>T | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoB | 762254 | c.2448T>G | synonymous_variant | 0.44 | rifampicin | |
rpoB | 762257 | c.2451C>G | synonymous_variant | 0.43 | rifampicin | |
rpoB | 762266 | c.2460T>C | synonymous_variant | 0.43 | rifampicin | |
rpoB | 762284 | c.2478G>C | synonymous_variant | 0.46 | rifampicin | Not assoc w R - Interim |
rpoB | 762293 | c.2487T>C | synonymous_variant | 0.48 | rifampicin | Not assoc w R - Interim |
rpoB | 762314 | c.2508C>T | synonymous_variant | 0.54 | rifampicin | |
rpoB | 762338 | c.2532T>C | synonymous_variant | 0.53 | rifampicin | |
rpoB | 762347 | c.2541T>C | synonymous_variant | 0.53 | rifampicin | |
rpoB | 762362 | p.Glu852Asp | missense_variant | 0.53 | rifampicin | |
rpoB | 762369 | c.2563T>C | synonymous_variant | 0.51 | rifampicin | |
rpoC | 762395 | c.-975G>C | upstream_gene_variant | 0.44 | rifampicin | |
rpoB | 762396 | c.2590_2592delCGTinsAG | frameshift_variant&missense_variant | 0.44 | rifampicin | |
rpoB | 762404 | c.2598T>C | synonymous_variant | 0.46 | rifampicin | Not assoc w R - Interim |
rpoC | 762410 | c.-960T>C | upstream_gene_variant | 0.46 | rifampicin | |
rpoB | 762416 | c.2610A>G | synonymous_variant | 0.46 | rifampicin | Not assoc w R - Interim |
rpoC | 762434 | c.-936T>C | upstream_gene_variant | 0.46 | rifampicin | |
rpoB | 762434 | c.2628T>G | synonymous_variant | 0.54 | rifampicin | Not assoc w R |
rpoB | 762449 | c.2643C>A | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoB | 762452 | c.2646G>C | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoB | 762470 | c.2664G>C | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoB | 762491 | c.2685T>C | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoC | 762509 | c.-861T>A | upstream_gene_variant | 0.31 | rifampicin | |
rpoB | 762510 | c.2704_2706delGCCinsCG | frameshift_variant&missense_variant | 0.31 | rifampicin | |
rpoC | 762524 | c.-846G>C | upstream_gene_variant | 0.34 | rifampicin | |
rpoC | 762527 | c.-843G>C | upstream_gene_variant | 0.34 | rifampicin | |
rpoC | 762533 | c.-837T>C | upstream_gene_variant | 0.33 | rifampicin | |
rpoC | 762536 | c.-834T>C | upstream_gene_variant | 0.33 | rifampicin | |
rpoC | 762537 | c.-833T>C | upstream_gene_variant | 0.33 | rifampicin | |
rpoC | 762545 | c.-825C>G | upstream_gene_variant | 0.33 | rifampicin | |
rpoC | 762551 | c.-819C>T | upstream_gene_variant | 0.34 | rifampicin | |
rpoC | 762581 | c.-789T>C | upstream_gene_variant | 0.32 | rifampicin | |
rpoC | 762582 | c.-788T>C | upstream_gene_variant | 0.31 | rifampicin | |
rpoC | 762587 | c.-783G>A | upstream_gene_variant | 0.3 | rifampicin | |
rpoC | 762596 | c.-774G>T | upstream_gene_variant | 0.27 | rifampicin | |
rpoB | 762599 | c.2793T>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoB | 762602 | c.2797delT | frameshift_variant | 0.24 | rifampicin | |
rpoB | 762607 | p.Ala934Gly | missense_variant | 0.24 | rifampicin | |
rpoB | 762613 | c.2807_2808insTC | frameshift_variant | 0.23 | rifampicin | |
rpoC | 762617 | c.-753C>G | upstream_gene_variant | 0.25 | rifampicin | |
rpoB | 762634 | p.Ala943Gly | missense_variant | 0.29 | rifampicin | |
rpoB | 762638 | p.Lys944Asn | missense_variant | 0.29 | rifampicin | Uncertain significance |
rpoC | 762660 | c.-710A>C | upstream_gene_variant | 0.31 | rifampicin | |
rpoB | 762674 | p.Glu956Asp | missense_variant | 0.29 | rifampicin | |
rpoC | 762680 | c.-690C>G | upstream_gene_variant | 0.28 | rifampicin | |
rpoB | 762681 | c.2875_2877delGAGinsCC | frameshift_variant&missense_variant | 0.28 | rifampicin | |
rpoB | 762687 | p.Gln961Glu | missense_variant | 0.3 | rifampicin | |
rpoC | 762701 | c.-669T>C | upstream_gene_variant | 0.29 | rifampicin | |
rpoB | 762725 | c.2919C>T | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoC | 762728 | c.-642C>G | upstream_gene_variant | 0.31 | rifampicin | |
rpoC | 762749 | c.-621C>G | upstream_gene_variant | 0.3 | rifampicin | |
rpoB | 762753 | c.2947T>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoB | 762759 | p.Cys985Ala | missense_variant | 0.3 | rifampicin | |
rpoB | 762782 | c.2976T>C | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoB | 762785 | p.Asp993Glu | missense_variant | 0.27 | rifampicin | Uncertain significance |
rpoC | 762794 | c.-576C>G | upstream_gene_variant | 0.29 | rifampicin | |
rpoB | 762799 | p.Ala998Gly | missense_variant | 0.3 | rifampicin | Uncertain significance |
rpoB | 762812 | c.3006C>G | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoB | 762813 | p.Met1003Val | missense_variant | 0.3 | rifampicin | |
rpoB | 762818 | c.3012C>G | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 762851 | c.-519C>T | upstream_gene_variant | 0.42 | rifampicin | |
rpoB | 762857 | c.3051C>G | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoB | 762923 | c.3117C>G | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoB | 762926 | c.3120C>T | synonymous_variant | 0.4 | rifampicin | Not assoc w R - Interim |
rpoB | 762929 | c.3123G>T | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoB | 762962 | c.3156C>T | synonymous_variant | 0.4 | rifampicin | Not assoc w R - Interim |
rpoC | 762983 | c.-387C>T | upstream_gene_variant | 0.37 | rifampicin | |
rpoB | 762995 | c.3189G>C | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoB | 763031 | c.3225T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R |
rpoB | 763034 | c.3228C>G | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoB | 763040 | c.3234C>G | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoB | 763070 | c.3264T>C | synonymous_variant | 0.35 | rifampicin | Not assoc w R - Interim |
rpoB | 763085 | c.3279C>G | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
rpoB | 763115 | c.3309T>C | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoC | 763127 | c.-243G>A | upstream_gene_variant | 0.31 | rifampicin | |
rpoB | 763130 | c.3324G>A | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 763136 | c.-234C>A | upstream_gene_variant | 0.31 | rifampicin | |
rpoC | 763139 | c.-231C>T | upstream_gene_variant | 0.3 | rifampicin | |
rpoB | 763157 | c.3351G>T | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoC | 763160 | c.-210G>C | upstream_gene_variant | 0.26 | rifampicin | |
rpoB | 763166 | c.3360A>G | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoC | 763169 | c.-201A>G | upstream_gene_variant | 0.23 | rifampicin | |
rpoB | 763238 | c.3432T>C | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoC | 763247 | c.-123G>A | upstream_gene_variant | 0.26 | rifampicin | |
rpoC | 763253 | c.-117G>T | upstream_gene_variant | 0.28 | rifampicin | |
rpoC | 763256 | c.-114G>A | upstream_gene_variant | 0.29 | rifampicin | |
rpoB | 763283 | c.3477T>C | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 763284 | c.-86C>T | upstream_gene_variant | 0.31 | rifampicin | |
rpoC | 763310 | c.-60C>T | upstream_gene_variant | 0.3 | rifampicin | |
rpoB | 763316 | c.3510T>C | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 763319 | c.-51T>G | upstream_gene_variant | 0.31 | rifampicin | |
rpoC | 763327 | c.-43G>T | upstream_gene_variant | 0.32 | rifampicin | |
rpoC | 763330 | c.-40G>T | upstream_gene_variant | 0.32 | rifampicin | |
rpoC | 763332 | c.-38C>T | upstream_gene_variant | 0.32 | rifampicin | Uncertain significance |
rpoC | 763334 | c.-36C>G | upstream_gene_variant | 0.32 | rifampicin | |
rpoC | 763338 | c.-32A>G | upstream_gene_variant | 0.32 | rifampicin | |
rpoC | 763339 | c.-31T>C | upstream_gene_variant | 0.32 | rifampicin | |
rpoC | 763342 | c.-28C>T | upstream_gene_variant | 0.32 | rifampicin | |
rpoC | 763344 | c.-26A>C | upstream_gene_variant | 0.31 | rifampicin | |
rpoC | 763399 | c.30C>T | synonymous_variant | 0.4 | rifampicin | |
rpoC | 763405 | c.36C>T | synonymous_variant | 0.4 | rifampicin | |
rpoC | 763411 | c.42T>G | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoC | 763441 | c.72C>T | synonymous_variant | 0.41 | rifampicin | |
rpoC | 763444 | c.75T>C | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoC | 763450 | c.81G>A | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoC | 763456 | c.87A>G | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoC | 763486 | c.117T>G | synonymous_variant | 0.43 | rifampicin | |
rpoC | 763528 | c.159G>A | synonymous_variant | 0.4 | rifampicin | Not assoc w R - Interim |
rpoC | 763546 | c.177A>G | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
rpoC | 763594 | c.225C>T | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoC | 763603 | c.234C>T | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoC | 763609 | c.240C>G | synonymous_variant | 0.33 | rifampicin | |
rpoC | 763615 | c.246G>T | synonymous_variant | 0.33 | rifampicin | |
rpoC | 763618 | c.249C>T | synonymous_variant | 0.33 | rifampicin | |
rpoC | 763636 | c.267T>C | synonymous_variant | 0.33 | rifampicin | |
rpoC | 763654 | c.285C>T | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoC | 763660 | c.291T>G | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
rpoC | 763669 | c.300C>G | synonymous_variant | 0.35 | rifampicin | Not assoc w R - Interim |
rpoC | 763675 | c.306C>A | synonymous_variant | 0.34 | rifampicin | |
rpoC | 763708 | c.339G>T | synonymous_variant | 0.37 | rifampicin | |
rpoC | 763717 | c.348T>C | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoC | 763732 | c.363C>G | synonymous_variant | 0.38 | rifampicin | |
rpoC | 763735 | c.366G>C | synonymous_variant | 0.39 | rifampicin | |
rpoC | 763744 | c.375G>C | synonymous_variant | 0.39 | rifampicin | |
rpoC | 763765 | c.396T>C | synonymous_variant | 0.4 | rifampicin | |
rpoC | 763768 | c.399C>G | synonymous_variant | 0.4 | rifampicin | |
rpoC | 763771 | c.402C>T | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoC | 763781 | p.Ser138Ala | missense_variant | 0.44 | rifampicin | |
rpoC | 763789 | c.420C>T | synonymous_variant | 0.46 | rifampicin | |
rpoC | 763807 | c.438T>C | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoC | 763816 | c.447C>G | synonymous_variant | 0.43 | rifampicin | |
rpoC | 763851 | p.Ala161Gly | missense_variant | 0.42 | rifampicin | |
rpoC | 763855 | c.486C>T | synonymous_variant | 0.42 | rifampicin | |
rpoC | 763858 | c.489A>G | synonymous_variant | 0.41 | rifampicin | |
rpoC | 763861 | c.492C>T | synonymous_variant | 0.41 | rifampicin | |
rpoC | 763872 | p.Gly168Ala | missense_variant | 0.39 | rifampicin | |
rpoC | 763876 | p.Glu169Asp | missense_variant | 0.38 | rifampicin | |
rpoC | 763879 | c.510A>G | synonymous_variant | 0.37 | rifampicin | |
rpoC | 763885 | c.516C>T | synonymous_variant | 0.37 | rifampicin | |
rpoC | 763888 | c.519G>T | synonymous_variant | 0.38 | rifampicin | |
rpoC | 763894 | c.525A>G | synonymous_variant | 0.4 | rifampicin | |
rpoC | 763924 | c.555G>A | synonymous_variant | 0.36 | rifampicin | |
rpoC | 763933 | c.564C>T | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoC | 763936 | c.567C>A | synonymous_variant | 0.29 | rifampicin | |
rpoC | 763939 | c.570G>A | synonymous_variant | 0.28 | rifampicin | |
rpoC | 763942 | c.573C>G | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoC | 763945 | c.576T>C | synonymous_variant | 0.28 | rifampicin | |
rpoC | 763948 | c.579G>C | synonymous_variant | 0.29 | rifampicin | |
rpoC | 763949 | p.Arg194Lys | missense_variant | 0.28 | rifampicin | |
rpoC | 763963 | c.594C>T | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
rpoC | 763996 | c.627T>C | synonymous_variant | 0.39 | rifampicin | |
rpoC | 764011 | c.642T>C | synonymous_variant | 0.4 | rifampicin | |
rpoC | 764015 | c.646C>T | synonymous_variant | 0.4 | rifampicin | |
rpoC | 764024 | c.655T>C | synonymous_variant | 0.42 | rifampicin | |
rpoC | 764040 | p.Ser224Asn | missense_variant | 0.43 | rifampicin | |
rpoC | 764044 | c.675T>C | synonymous_variant | 0.43 | rifampicin | |
rpoC | 764059 | c.690G>T | synonymous_variant | 0.42 | rifampicin | |
rpoC | 764083 | c.714A>G | synonymous_variant | 0.49 | rifampicin | |
rpoC | 764098 | c.729A>G | synonymous_variant | 0.53 | rifampicin | Not assoc w R - Interim |
rpoC | 764113 | c.744C>T | synonymous_variant | 0.5 | rifampicin | |
rpoC | 764116 | c.747C>T | synonymous_variant | 0.5 | rifampicin | Not assoc w R - Interim |
rpoC | 764143 | c.774G>A | synonymous_variant | 0.53 | rifampicin | |
rpoC | 764188 | c.819A>G | synonymous_variant | 0.57 | rifampicin | Not assoc w R - Interim |
rpoC | 764191 | c.822C>T | synonymous_variant | 0.57 | rifampicin | |
rpoC | 764197 | c.828G>A | synonymous_variant | 0.59 | rifampicin | |
rpoC | 764203 | c.834G>C | synonymous_variant | 0.59 | rifampicin | |
rpoC | 764245 | c.876C>T | synonymous_variant | 0.6 | rifampicin | |
rpoC | 764246 | c.877_879delCTCinsTG | frameshift_variant&missense_variant | 0.6 | rifampicin | |
rpoC | 764257 | c.888G>C | synonymous_variant | 0.63 | rifampicin | |
rpoC | 764266 | c.897T>C | synonymous_variant | 0.63 | rifampicin | |
rpoC | 764278 | c.909A>G | synonymous_variant | 0.66 | rifampicin | Not assoc w R - Interim |
rpoC | 764284 | c.915G>C | synonymous_variant | 0.67 | rifampicin | |
rpoC | 764293 | c.924G>A | synonymous_variant | 0.66 | rifampicin | |
rpoC | 764317 | c.948C>G | synonymous_variant | 0.67 | rifampicin | |
rpoC | 764320 | c.951C>G | synonymous_variant | 0.67 | rifampicin | |
rpoC | 764326 | c.957G>C | synonymous_variant | 0.67 | rifampicin | Not assoc w R - Interim |
rpoC | 764338 | c.969G>A | synonymous_variant | 0.68 | rifampicin | Not assoc w R - Interim |
rpoC | 764344 | c.975C>G | synonymous_variant | 0.68 | rifampicin | |
rpoC | 764347 | c.978G>T | synonymous_variant | 0.68 | rifampicin | |
rpoC | 764365 | c.996C>T | synonymous_variant | 0.7 | rifampicin | Not assoc w R - Interim |
rpoC | 764368 | c.999C>G | synonymous_variant | 0.69 | rifampicin | |
rpoC | 764383 | c.1014C>T | synonymous_variant | 0.66 | rifampicin | Not assoc w R - Interim |
rpoC | 764392 | c.1023C>T | synonymous_variant | 0.63 | rifampicin | |
rpoC | 764404 | c.1035C>G | synonymous_variant | 0.59 | rifampicin | |
rpoC | 764405 | c.1036_1038delAGGinsCC | frameshift_variant&missense_variant | 0.6 | rifampicin | |
rpoC | 764431 | c.1062G>C | synonymous_variant | 0.57 | rifampicin | Not assoc w R - Interim |
rpoC | 764434 | c.1065A>G | synonymous_variant | 0.56 | rifampicin | Not assoc w R - Interim |
rpoC | 764446 | c.1077T>C | synonymous_variant | 0.52 | rifampicin | |
rpoC | 764452 | c.1083T>C | synonymous_variant | 0.51 | rifampicin | |
rpoC | 764461 | c.1092A>G | synonymous_variant | 0.48 | rifampicin | Not assoc w R - Interim |
rpoC | 764497 | c.1128A>G | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoC | 764503 | c.1134G>C | synonymous_variant | 0.41 | rifampicin | |
rpoC | 764521 | c.1152T>C | synonymous_variant | 0.4 | rifampicin | Not assoc w R - Interim |
rpoC | 764527 | c.1158C>T | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoC | 764539 | c.1170C>G | synonymous_variant | 0.4 | rifampicin | Not assoc w R - Interim |
rpoC | 764542 | c.1173C>T | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoC | 764548 | c.1179G>T | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoC | 764566 | c.1197C>G | synonymous_variant | 0.35 | rifampicin | Not assoc w R - Interim |
rpoC | 764570 | c.1203_1204delGC | frameshift_variant | 0.32 | rifampicin | |
rpoC | 764577 | c.1208delCinsGAG | frameshift_variant&stop_gained&missense_variant | 0.32 | rifampicin | |
rpoC | 764581 | c.1212T>C | synonymous_variant | 0.3 | rifampicin | |
rpoC | 764626 | c.1257C>T | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoC | 764650 | c.1281G>T | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoC | 764696 | c.1327C>T | synonymous_variant | 0.27 | rifampicin | |
rpoC | 764701 | c.1332C>T | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoC | 764749 | c.1380G>C | synonymous_variant | 0.33 | rifampicin | |
rpoC | 764752 | c.1383G>C | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoC | 764764 | c.1395T>C | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
rpoC | 764803 | c.1434C>G | synonymous_variant | 0.42 | rifampicin | |
rpoC | 764809 | c.1440C>T | synonymous_variant | 0.41 | rifampicin | Not assoc w R |
rpoC | 764812 | c.1443C>T | synonymous_variant | 0.41 | rifampicin | |
rpoC | 764815 | c.1446A>G | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoC | 764824 | c.1455T>C | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoC | 764833 | c.1464A>G | synonymous_variant | 0.38 | rifampicin | |
rpoC | 764836 | c.1467G>A | synonymous_variant | 0.38 | rifampicin | |
rpoC | 764839 | c.1470C>A | synonymous_variant | 0.38 | rifampicin | |
rpoC | 764842 | c.1473C>T | synonymous_variant | 0.38 | rifampicin | |
rpoC | 764845 | c.1476C>A | synonymous_variant | 0.37 | rifampicin | |
rpoC | 764851 | c.1482C>T | synonymous_variant | 0.37 | rifampicin | |
rpoC | 764854 | c.1485G>T | synonymous_variant | 0.38 | rifampicin | |
rpoC | 764857 | c.1488G>T | synonymous_variant | 0.38 | rifampicin | |
rpoC | 764872 | c.1503A>G | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoC | 764887 | c.1518G>C | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoC | 764888 | c.1519T>C | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoC | 764899 | c.1530G>A | synonymous_variant | 0.38 | rifampicin | |
rpoC | 764932 | c.1563C>G | synonymous_variant | 0.37 | rifampicin | |
rpoC | 764968 | c.1599T>C | synonymous_variant | 0.45 | rifampicin | Not assoc w R - Interim |
rpoC | 764998 | c.1629G>T | synonymous_variant | 0.52 | rifampicin | |
rpoC | 765007 | c.1638T>G | synonymous_variant | 0.52 | rifampicin | Not assoc w R - Interim |
rpoC | 765019 | c.1650A>G | synonymous_variant | 0.51 | rifampicin | Not assoc w R - Interim |
rpoC | 765034 | c.1665T>A | synonymous_variant | 0.52 | rifampicin | Not assoc w R - Interim |
rpoC | 765041 | c.1672T>C | synonymous_variant | 0.52 | rifampicin | Not assoc w R - Interim |
rpoC | 765073 | c.1704G>C | synonymous_variant | 0.49 | rifampicin | Not assoc w R - Interim |
rpoC | 765079 | c.1710T>C | synonymous_variant | 0.48 | rifampicin | |
rpoC | 765082 | c.1713G>T | synonymous_variant | 0.46 | rifampicin | |
rpoC | 765089 | c.1720T>C | synonymous_variant | 0.47 | rifampicin | Not assoc w R - Interim |
rpoC | 765103 | c.1734G>A | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoC | 765122 | c.1753C>T | synonymous_variant | 0.43 | rifampicin | |
rpoC | 765146 | p.Pro593Glu | missense_variant | 0.37 | rifampicin | |
rpoC | 765151 | c.1782G>T | synonymous_variant | 0.39 | rifampicin | |
rpoC | 765156 | p.Thr596Asn | missense_variant | 0.39 | rifampicin | |
rpoC | 765170 | p.Pro601Thr | missense_variant | 0.39 | rifampicin | |
rpoC | 765177 | p.Ser603Asn | missense_variant | 0.35 | rifampicin | |
rpoC | 765181 | c.1812G>C | synonymous_variant | 0.33 | rifampicin | |
rpoC | 765184 | c.1815T>C | synonymous_variant | 0.33 | rifampicin | |
rpoC | 765186 | p.His606Arg | missense_variant | 0.33 | rifampicin | |
rpoC | 765194 | c.1825_1827delACTinsTG | frameshift_variant&missense_variant | 0.33 | rifampicin | |
rpoC | 765202 | c.1833C>G | synonymous_variant | 0.39 | rifampicin | |
rpoC | 765208 | c.1839T>C | synonymous_variant | 0.4 | rifampicin | |
rpoC | 765247 | c.1878C>A | synonymous_variant | 0.46 | rifampicin | |
rpoC | 765292 | c.1923G>T | synonymous_variant | 0.5 | rifampicin | |
rpoC | 765298 | c.1929G>C | synonymous_variant | 0.47 | rifampicin | |
rpoC | 765300 | p.Val644Ala | missense_variant | 0.47 | rifampicin | Uncertain significance |
rpoC | 765319 | c.1950A>G | synonymous_variant | 0.49 | rifampicin | Not assoc w R - Interim |
rpoC | 765326 | p.His653Gly | missense_variant | 0.49 | rifampicin | |
rpoC | 765330 | p.Ser654Asn | missense_variant | 0.49 | rifampicin | Uncertain significance |
rpoC | 765334 | c.1965C>G | synonymous_variant | 0.5 | rifampicin | |
rpoC | 765350 | c.1981_1983delGCGinsCT | frameshift_variant&missense_variant | 0.5 | rifampicin | |
rpoC | 765370 | c.2001G>A | synonymous_variant | 0.47 | rifampicin | Not assoc w R - Interim |
rpoC | 765371 | c.2002C>T | synonymous_variant | 0.48 | rifampicin | |
rpoC | 765406 | c.2037G>T | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoC | 765409 | c.2040T>G | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoC | 765421 | c.2052C>G | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoC | 765451 | c.2082C>T | synonymous_variant | 0.43 | rifampicin | |
rpoC | 765452 | c.2083_2085delGCCinsTG | frameshift_variant&missense_variant | 0.43 | rifampicin | |
rpoC | 765478 | c.2109T>C | synonymous_variant | 0.46 | rifampicin | Not assoc w R - Interim |
rpoC | 765499 | c.2130C>G | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoC | 765529 | c.2160C>T | synonymous_variant | 0.34 | rifampicin | |
rpoC | 765541 | c.2172C>G | synonymous_variant | 0.32 | rifampicin | |
rpoC | 765547 | c.2178C>A | synonymous_variant | 0.3 | rifampicin | |
rpoC | 765553 | c.2184C>T | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoC | 765556 | c.2187G>C | synonymous_variant | 0.29 | rifampicin | |
rpoC | 765562 | c.2193G>C | synonymous_variant | 0.26 | rifampicin | |
rpoC | 765578 | c.2209C>T | synonymous_variant | 0.24 | rifampicin | |
rpoC | 765583 | c.2214G>T | synonymous_variant | 0.26 | rifampicin | |
rpoC | 765613 | p.His748Gln | missense_variant | 0.32 | rifampicin | |
rpoC | 765619 | c.2250G>A | synonymous_variant | 0.34 | rifampicin | |
rpoC | 765625 | c.2256C>T | synonymous_variant | 0.35 | rifampicin | |
rpoC | 765628 | c.2259G>C | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
rpoC | 765685 | c.2316G>A | synonymous_variant | 0.47 | rifampicin | |
rpoC | 765688 | c.2319G>A | synonymous_variant | 0.48 | rifampicin | |
rpoC | 765700 | c.2331T>C | synonymous_variant | 0.51 | rifampicin | Not assoc w R - Interim |
rpoC | 765734 | c.2365T>C | synonymous_variant | 0.51 | rifampicin | Not assoc w R - Interim |
rpoC | 765752 | p.Asp795Ser | missense_variant | 0.47 | rifampicin | |
rpoC | 765772 | c.2403C>G | synonymous_variant | 0.48 | rifampicin | |
rpoC | 765784 | c.2415C>G | synonymous_variant | 0.45 | rifampicin | |
rpoC | 765787 | c.2418C>T | synonymous_variant | 0.46 | rifampicin | |
rpoC | 765793 | c.2424C>G | synonymous_variant | 0.45 | rifampicin | |
rpoC | 765796 | c.2427C>T | synonymous_variant | 0.46 | rifampicin | |
rpoC | 765805 | c.2436C>T | synonymous_variant | 0.45 | rifampicin | |
rpoC | 765811 | c.2442T>C | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoC | 765814 | c.2445A>G | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoC | 765826 | c.2457T>C | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoC | 765835 | c.2466C>T | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoC | 765850 | c.2481G>C | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoC | 765856 | c.2487T>C | synonymous_variant | 0.44 | rifampicin | |
rpoC | 765871 | c.2502T>C | synonymous_variant | 0.43 | rifampicin | |
rpoC | 765874 | c.2505G>A | synonymous_variant | 0.43 | rifampicin | |
rpoC | 765883 | c.2514C>G | synonymous_variant | 0.43 | rifampicin | |
rpoC | 765886 | c.2517C>G | synonymous_variant | 0.44 | rifampicin | |
rpoC | 765898 | c.2529C>A | synonymous_variant | 0.49 | rifampicin | |
rpoC | 765934 | c.2565C>T | synonymous_variant | 0.51 | rifampicin | |
rpoC | 765967 | c.2598C>T | synonymous_variant | 0.49 | rifampicin | Not assoc w R - Interim |
rpoC | 765979 | c.2610C>G | synonymous_variant | 0.48 | rifampicin | Not assoc w R - Interim |
rpoC | 765994 | c.2625A>T | synonymous_variant | 0.5 | rifampicin | Not assoc w R - Interim |
rpoC | 766009 | c.2640G>T | synonymous_variant | 0.5 | rifampicin | |
rpoC | 766012 | c.2643C>G | synonymous_variant | 0.5 | rifampicin | Not assoc w R - Interim |
rpoC | 766021 | c.2652G>C | synonymous_variant | 0.53 | rifampicin | |
rpoC | 766027 | c.2658G>C | synonymous_variant | 0.54 | rifampicin | |
rpoC | 766060 | c.2691C>T | synonymous_variant | 0.45 | rifampicin | |
rpoC | 766066 | c.2697C>A | synonymous_variant | 0.43 | rifampicin | |
rpoC | 766069 | c.2700G>A | synonymous_variant | 0.42 | rifampicin | |
rpoC | 766082 | p.Ala905Gln | missense_variant | 0.39 | rifampicin | |
rpoC | 766087 | c.2718C>T | synonymous_variant | 0.39 | rifampicin | |
rpoC | 766093 | c.2724C>T | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoC | 766094 | c.2725_2727delACGinsGC | frameshift_variant&missense_variant | 0.41 | rifampicin | |
rpoC | 766129 | c.2760C>G | synonymous_variant | 0.36 | rifampicin | |
rpoC | 766135 | c.2766G>A | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 766141 | c.2772C>T | synonymous_variant | 0.26 | rifampicin | |
rpoC | 766142 | c.2773C>T | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoC | 766280 | p.Ser971Gly | missense_variant | 0.22 | rifampicin | |
rpoC | 766312 | c.2943T>G | synonymous_variant | 0.32 | rifampicin | |
rpoC | 766315 | c.2946C>G | synonymous_variant | 0.34 | rifampicin | |
rpoC | 766331 | c.2962C>T | synonymous_variant | 0.38 | rifampicin | |
rpoC | 766345 | c.2976T>C | synonymous_variant | 0.45 | rifampicin | |
rpoC | 766348 | c.2979A>G | synonymous_variant | 0.47 | rifampicin | Not assoc w R - Interim |
rpoC | 766357 | c.2988C>T | synonymous_variant | 0.49 | rifampicin | |
rpoC | 766363 | c.2994G>C | synonymous_variant | 0.52 | rifampicin | |
rpoC | 766369 | c.3000C>T | synonymous_variant | 0.54 | rifampicin | |
rpoC | 766378 | c.3009C>T | synonymous_variant | 0.55 | rifampicin | |
rpoC | 766384 | c.3015A>G | synonymous_variant | 0.58 | rifampicin | |
rpoC | 766393 | c.3024C>G | synonymous_variant | 0.58 | rifampicin | |
rpoC | 766408 | c.3039C>T | synonymous_variant | 0.58 | rifampicin | Not assoc w R - Interim |
rpoC | 766426 | c.3057C>T | synonymous_variant | 0.59 | rifampicin | |
rpoC | 766447 | c.3078T>C | synonymous_variant | 0.59 | rifampicin | |
rpoC | 766462 | c.3093G>T | synonymous_variant | 0.58 | rifampicin | |
rpoC | 766486 | c.3117A>G | synonymous_variant | 0.6 | rifampicin | |
rpoC | 766488 | p.Pro1040Arg | missense_variant | 0.41 | rifampicin | Uncertain significance |
rpoC | 766531 | c.3162G>T | synonymous_variant | 0.57 | rifampicin | |
rpoC | 766543 | c.3174C>G | synonymous_variant | 0.56 | rifampicin | |
rpoC | 766549 | c.3180G>C | synonymous_variant | 0.56 | rifampicin | |
rpoC | 766573 | c.3204T>C | synonymous_variant | 0.54 | rifampicin | |
rpoC | 766582 | c.3213C>T | synonymous_variant | 0.53 | rifampicin | Not assoc w R - Interim |
rpoC | 766585 | c.3216T>C | synonymous_variant | 0.53 | rifampicin | |
rpoC | 766594 | c.3225G>C | synonymous_variant | 0.5 | rifampicin | |
rpoC | 766607 | p.Ile1080Leu | missense_variant | 0.49 | rifampicin | |
rpoC | 766645 | c.3276A>G | synonymous_variant | 0.38 | rifampicin | |
rpoC | 766657 | c.3288A>G | synonymous_variant | 0.41 | rifampicin | |
rpoC | 766666 | c.3297C>G | synonymous_variant | 0.41 | rifampicin | |
rpoC | 766672 | c.3303T>C | synonymous_variant | 0.4 | rifampicin | |
rpoC | 766690 | c.3321G>C | synonymous_variant | 0.45 | rifampicin | |
rpoC | 766693 | c.3324C>G | synonymous_variant | 0.45 | rifampicin | |
rpoC | 766726 | c.3357T>C | synonymous_variant | 0.55 | rifampicin | |
rpoC | 766738 | c.3369G>T | synonymous_variant | 0.57 | rifampicin | |
rpoC | 766750 | c.3381C>A | synonymous_variant | 0.58 | rifampicin | |
rpoC | 766753 | c.3384C>T | synonymous_variant | 0.58 | rifampicin | |
rpoC | 766765 | c.3396A>C | synonymous_variant | 0.61 | rifampicin | Not assoc w R - Interim |
rpoC | 766774 | c.3405T>G | synonymous_variant | 0.59 | rifampicin | Not assoc w R - Interim |
rpoC | 766777 | c.3408C>T | synonymous_variant | 0.59 | rifampicin | |
rpoC | 766783 | c.3414C>T | synonymous_variant | 0.61 | rifampicin | |
rpoC | 766798 | c.3429C>G | synonymous_variant | 0.6 | rifampicin | Not assoc w R - Interim |
rpoC | 766804 | c.3435A>G | synonymous_variant | 0.6 | rifampicin | Not assoc w R - Interim |
rpoC | 766864 | c.3495G>C | synonymous_variant | 0.58 | rifampicin | |
rpoC | 766894 | c.3525T>C | synonymous_variant | 0.53 | rifampicin | |
rpoC | 766895 | c.3526T>C | synonymous_variant | 0.53 | rifampicin | |
rpoC | 766900 | c.3531T>C | synonymous_variant | 0.54 | rifampicin | |
rpoC | 766918 | c.3549C>T | synonymous_variant | 0.54 | rifampicin | Not assoc w R - Interim |
rpoC | 766933 | c.3564A>G | synonymous_variant | 0.56 | rifampicin | |
rpoC | 766942 | c.3573C>T | synonymous_variant | 0.56 | rifampicin | Not assoc w R - Interim |
rpoC | 766945 | c.3576A>G | synonymous_variant | 0.59 | rifampicin | Not assoc w R - Interim |
rpoC | 766963 | c.3594T>C | synonymous_variant | 0.61 | rifampicin | Not assoc w R - Interim |
rpoC | 766972 | c.3603G>C | synonymous_variant | 0.64 | rifampicin | |
rpoC | 766978 | c.3609C>T | synonymous_variant | 0.66 | rifampicin | |
rpoC | 766996 | c.3627C>T | synonymous_variant | 0.67 | rifampicin | Not assoc w R - Interim |
rpoC | 767033 | c.3664_3666delTCGinsAGT | synonymous_variant | 0.67 | rifampicin | |
rpoC | 767059 | c.3690T>G | synonymous_variant | 0.65 | rifampicin | Not assoc w R - Interim |
rpoC | 767062 | c.3693C>A | synonymous_variant | 0.62 | rifampicin | |
rpoC | 767098 | c.3729T>C | synonymous_variant | 0.57 | rifampicin | Not assoc w R - Interim |
rpoC | 767119 | c.3750A>G | synonymous_variant | 0.52 | rifampicin | Not assoc w R - Interim |
rpoC | 767167 | c.3798C>T | synonymous_variant | 0.38 | rifampicin | |
rpoC | 767180 | p.Ala1271Gln | missense_variant | 0.32 | rifampicin | |
rpoC | 767185 | c.3816G>C | synonymous_variant | 0.31 | rifampicin | |
rpoC | 767191 | c.3822C>G | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoC | 767197 | c.3828G>A | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoC | 767200 | c.3831G>A | synonymous_variant | 0.29 | rifampicin | |
rpoC | 767203 | c.3834C>A | synonymous_variant | 0.3 | rifampicin | |
rpoC | 767206 | c.3837C>G | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoC | 767209 | c.3840T>G | synonymous_variant | 0.3 | rifampicin | |
rpoC | 767212 | c.3843G>C | synonymous_variant | 0.3 | rifampicin | |
mmpL5 | 775639 | p.Ile948Val | missense_variant | 1.0 | clofazimine | Not assoc w R |
bedaquiline | Not assoc w R - Interim | |||||
mmpL5 | 776100 | p.Thr794Ile | missense_variant | 1.0 | clofazimine | Not assoc w R |
bedaquiline | Not assoc w R - Interim | |||||
rpsL | 781137 | c.-423G>C | upstream_gene_variant | 0.22 | streptomycin | |
rpsL | 781138 | c.-422C>G | upstream_gene_variant | 0.22 | streptomycin | |
rpsL | 781143 | c.-417T>G | upstream_gene_variant | 0.22 | streptomycin | |
rpsL | 781152 | c.-408G>C | upstream_gene_variant | 0.23 | streptomycin | |
rpsL | 781164 | c.-396T>C | upstream_gene_variant | 0.22 | streptomycin | |
rpsL | 781395 | c.-165T>C | upstream_gene_variant | 1.0 | streptomycin | Not assoc w R |
rpsL | 781571 | c.12C>T | synonymous_variant | 0.26 | streptomycin | |
rpsL | 781608 | c.49_51delAGTinsGC | frameshift_variant&missense_variant | 0.4 | streptomycin | Uncertain significance |
rpsL | 781646 | c.87G>A | synonymous_variant | 0.53 | streptomycin | Not assoc w R - Interim |
rpsL | 781649 | c.90T>C | synonymous_variant | 0.52 | streptomycin | |
rpsL | 781655 | c.96T>C | synonymous_variant | 0.53 | streptomycin | |
rpsL | 781679 | c.120C>T | synonymous_variant | 0.57 | streptomycin | Not assoc w R - Interim |
rpsL | 781694 | c.135G>A | synonymous_variant | 0.57 | streptomycin | Not assoc w R - Interim |
rpsL | 781715 | c.156T>C | synonymous_variant | 0.58 | streptomycin | |
rpsL | 781718 | c.159C>A | synonymous_variant | 0.57 | streptomycin | |
rpsL | 781721 | c.162C>T | synonymous_variant | 0.57 | streptomycin | |
rpsL | 781728 | c.169T>C | synonymous_variant | 0.57 | streptomycin | |
rpsL | 781733 | c.174G>A | synonymous_variant | 0.56 | streptomycin | |
rpsL | 781742 | c.183C>T | synonymous_variant | 0.57 | streptomycin | |
rpsL | 781754 | c.195G>A | synonymous_variant | 0.57 | streptomycin | Not assoc w R - Interim |
rpsL | 781760 | c.201T>C | synonymous_variant | 0.58 | streptomycin | |
rpsL | 781766 | c.207C>T | synonymous_variant | 0.58 | streptomycin | Not assoc w R - Interim |
rpsL | 781781 | c.222G>C | synonymous_variant | 0.58 | streptomycin | |
rpsL | 781808 | c.249C>T | synonymous_variant | 0.59 | streptomycin | |
rpsL | 781832 | c.273T>C | synonymous_variant | 0.6 | streptomycin | |
rpsL | 781841 | c.282C>G | synonymous_variant | 0.6 | streptomycin | |
rpsL | 781859 | c.300T>A | synonymous_variant | 0.6 | streptomycin | |
rpsL | 781862 | c.303G>T | synonymous_variant | 0.59 | streptomycin | |
rpsL | 781868 | c.309T>C | synonymous_variant | 0.58 | streptomycin | |
rpsL | 781871 | c.312G>C | synonymous_variant | 0.58 | streptomycin | |
rpsL | 781880 | c.321C>G | synonymous_variant | 0.59 | streptomycin | |
rpsL | 781892 | c.333A>G | synonymous_variant | 0.59 | streptomycin | |
rpsL | 781898 | c.339A>T | synonymous_variant | 0.58 | streptomycin | |
rpsL | 781916 | c.357T>C | synonymous_variant | 0.59 | streptomycin | |
rpsL | 781929 | p.Gly124Ser | missense_variant | 0.59 | streptomycin | Uncertain significance |
rpsL | 781933 | c.374G>A | splice_region_variant&stop_retained_variant | 0.6 | streptomycin | |
rplC | 800516 | c.-293G>C | upstream_gene_variant | 0.22 | linezolid | |
rplC | 800537 | c.-272C>T | upstream_gene_variant | 0.3 | linezolid | |
rplC | 800555 | c.-254C>A | upstream_gene_variant | 0.38 | linezolid | |
rplC | 800567 | c.-242A>G | upstream_gene_variant | 0.41 | linezolid | |
rplC | 800582 | c.-227C>G | upstream_gene_variant | 0.41 | linezolid | |
rplC | 800585 | c.-224T>C | upstream_gene_variant | 0.41 | linezolid | |
rplC | 800588 | c.-221C>T | upstream_gene_variant | 0.42 | linezolid | |
rplC | 800597 | c.-212A>G | upstream_gene_variant | 0.43 | linezolid | |
rplC | 800600 | c.-209G>T | upstream_gene_variant | 0.43 | linezolid | |
rplC | 800609 | c.-200G>A | upstream_gene_variant | 0.42 | linezolid | |
rplC | 800610 | c.-199_-197delCTAinsTG | upstream_gene_variant | 0.42 | linezolid | |
rplC | 800618 | c.-191T>C | upstream_gene_variant | 0.44 | linezolid | |
rplC | 800621 | c.-188G>A | upstream_gene_variant | 0.43 | linezolid | |
rplC | 800642 | c.-167C>T | upstream_gene_variant | 0.47 | linezolid | |
rplC | 800648 | c.-161A>C | upstream_gene_variant | 0.48 | linezolid | |
rplC | 800672 | c.-137G>C | upstream_gene_variant | 0.47 | linezolid | |
rplC | 800693 | c.-116A>C | upstream_gene_variant | 0.48 | linezolid | |
rplC | 800715 | c.-94A>C | upstream_gene_variant | 0.47 | linezolid | |
rplC | 800723 | c.-86C>G | upstream_gene_variant | 0.45 | linezolid | |
rplC | 800744 | c.-65G>C | upstream_gene_variant | 0.49 | linezolid | |
rplC | 800753 | c.-56C>T | upstream_gene_variant | 0.49 | linezolid | |
rplC | 800759 | c.-50C>T | upstream_gene_variant | 0.48 | linezolid | |
rplC | 800762 | c.-47T>G | upstream_gene_variant | 0.49 | linezolid | |
rplC | 800771 | c.-38C>T | upstream_gene_variant | 0.5 | linezolid | |
rplC | 800799 | c.-10G>C | upstream_gene_variant | 0.44 | linezolid | |
rplC | 800801 | c.-8A>G | upstream_gene_variant | 0.42 | linezolid | |
rplC | 800802 | c.-6delA | upstream_gene_variant | 0.43 | linezolid | |
rplC | 800815 | c.7C>A | synonymous_variant | 0.43 | linezolid | |
rplC | 800820 | c.12G>A | synonymous_variant | 0.42 | linezolid | |
rplC | 800829 | c.21C>G | synonymous_variant | 0.39 | linezolid | |
rplC | 800844 | c.36T>C | synonymous_variant | 0.35 | linezolid | |
rplC | 800867 | p.Ser20Asn | missense_variant | 0.24 | linezolid | |
rplC | 801195 | c.387G>C | synonymous_variant | 0.27 | linezolid | |
rplC | 801201 | c.393C>T | synonymous_variant | 0.28 | linezolid | |
rplC | 801216 | c.408C>T | synonymous_variant | 0.28 | linezolid | |
rplC | 801222 | c.414T>C | synonymous_variant | 0.31 | linezolid | |
rplC | 801228 | c.420T>C | synonymous_variant | 0.33 | linezolid | |
rplC | 801246 | c.438C>G | synonymous_variant | 0.35 | linezolid | |
rplC | 801249 | c.441T>A | synonymous_variant | 0.36 | linezolid | |
rplC | 801258 | c.450C>G | synonymous_variant | 0.38 | linezolid | |
rplC | 801261 | c.453C>T | synonymous_variant | 0.37 | linezolid | |
rplC | 801267 | c.459A>C | synonymous_variant | 0.39 | linezolid | |
rplC | 801276 | c.468G>T | synonymous_variant | 0.4 | linezolid | |
rplC | 801307 | c.499_501delGCCinsTG | frameshift_variant&missense_variant | 0.42 | linezolid | |
rplC | 801315 | c.507G>C | synonymous_variant | 0.42 | linezolid | |
rplC | 801324 | c.516T>C | synonymous_variant | 0.42 | linezolid | |
rplC | 801333 | c.525G>A | synonymous_variant | 0.39 | linezolid | |
rplC | 801338 | p.Val177Ala | missense_variant | 0.37 | linezolid | |
rplC | 801341 | p.Leu178Gln | missense_variant | 0.37 | linezolid | |
rplC | 801348 | c.540T>G | synonymous_variant | 0.37 | linezolid | |
rplC | 801357 | c.549T>C | synonymous_variant | 0.38 | linezolid | |
rplC | 801402 | c.594T>C | synonymous_variant | 0.42 | linezolid | |
rplC | 801405 | c.597T>C | synonymous_variant | 0.41 | linezolid | |
rplC | 801408 | c.600C>G | synonymous_variant | 0.42 | linezolid | |
rplC | 801426 | c.618C>G | synonymous_variant | 0.43 | linezolid | |
rplC | 801427 | p.Met207Val | missense_variant | 0.44 | linezolid | |
rplC | 801438 | c.630T>C | synonymous_variant | 0.48 | linezolid | |
rplC | 801447 | c.639A>G | synonymous_variant | 0.44 | linezolid | |
rplC | 801461 | c.653G>A | splice_region_variant&stop_retained_variant | 0.43 | linezolid | |
Rv1129c | 1254562 | c.-28T>C | upstream_gene_variant | 0.99 | moxifloxacin | Not assoc w R |
levofloxacin | Not assoc w R | |||||
rifampicin | Not assoc w R | |||||
isoniazid | Not assoc w R | |||||
fbiC | 1303431 | c.501T>C | synonymous_variant | 0.2 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303437 | c.507C>G | synonymous_variant | 0.23 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303441 | c.511T>C | synonymous_variant | 0.24 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303458 | c.528G>A | synonymous_variant | 0.32 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303464 | c.534A>C | synonymous_variant | 0.36 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303470 | c.540T>G | synonymous_variant | 0.39 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303480 | p.Gln184Glu | missense_variant | 0.43 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303509 | c.579G>C | synonymous_variant | 0.49 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303512 | c.582T>C | synonymous_variant | 0.5 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303554 | c.624G>C | synonymous_variant | 0.59 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303557 | c.627G>C | synonymous_variant | 0.6 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303584 | c.654C>G | synonymous_variant | 0.6 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303587 | c.657G>A | synonymous_variant | 0.59 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303590 | c.660A>G | synonymous_variant | 0.6 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303608 | c.678G>A | synonymous_variant | 0.57 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303617 | c.687C>G | synonymous_variant | 0.55 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303632 | c.702T>G | synonymous_variant | 0.58 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303659 | c.729T>C | synonymous_variant | 0.57 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303661 | p.Val244Ala | missense_variant | 0.57 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303677 | c.747C>G | synonymous_variant | 0.58 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303681 | c.751T>C | synonymous_variant | 0.58 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303695 | c.765T>C | synonymous_variant | 0.58 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303708 | c.778T>C | synonymous_variant | 0.57 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303731 | c.801A>G | synonymous_variant | 0.59 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303732 | p.Ser268Ala | missense_variant | 0.59 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303737 | c.807G>A | synonymous_variant | 0.59 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303743 | c.813C>T | synonymous_variant | 0.59 | clofazimine | Not assoc w R - Interim |
pretomanid | ||||||
delamanid | Not assoc w R - Interim | |||||
fbiC | 1303746 | c.816T>C | synonymous_variant | 0.6 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303752 | c.822A>G | synonymous_variant | 0.6 | clofazimine | Not assoc w R - Interim |
pretomanid | ||||||
delamanid | Not assoc w R - Interim | |||||
fbiC | 1303755 | c.825T>C | synonymous_variant | 0.6 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303788 | c.858T>C | synonymous_variant | 0.59 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303800 | c.870G>C | synonymous_variant | 0.6 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303818 | c.888C>G | synonymous_variant | 0.55 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303844 | p.Ala305Asp | missense_variant | 0.45 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303846 | p.Phe306Val | missense_variant | 0.45 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303860 | c.930A>C | synonymous_variant | 0.38 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303869 | c.939T>C | synonymous_variant | 0.35 | clofazimine | Not assoc w R - Interim |
pretomanid | ||||||
delamanid | Not assoc w R - Interim | |||||
fbiC | 1303875 | c.945G>T | synonymous_variant | 0.32 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303878 | c.948G>C | synonymous_variant | 0.33 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303884 | c.954T>G | synonymous_variant | 0.37 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303890 | c.960G>T | synonymous_variant | 0.36 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303905 | c.975G>C | synonymous_variant | 0.38 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303914 | c.984C>G | synonymous_variant | 0.4 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303923 | c.993C>T | synonymous_variant | 0.41 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303932 | c.1002G>C | synonymous_variant | 0.4 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303947 | c.1017T>G | synonymous_variant | 0.32 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303959 | c.1029C>T | synonymous_variant | 0.33 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303961 | p.Arg344Leu | missense_variant | 0.33 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303965 | c.1035G>T | synonymous_variant | 0.31 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303966 | c.1036C>T | synonymous_variant | 0.32 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303971 | c.1041T>G | synonymous_variant | 0.34 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303973 | p.Gly348Ala | missense_variant | 0.32 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303980 | c.1050G>T | synonymous_variant | 0.34 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303995 | c.1065C>T | synonymous_variant | 0.4 | clofazimine | Not assoc w R - Interim |
pretomanid | ||||||
delamanid | Not assoc w R - Interim | |||||
fbiC | 1303998 | c.1068T>C | synonymous_variant | 0.42 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304007 | c.1077G>A | synonymous_variant | 0.43 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304008 | c.1078T>C | synonymous_variant | 0.43 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304035 | c.1105C>A | synonymous_variant | 0.43 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304047 | p.Ala373Thr | missense_variant | 0.43 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304055 | c.1125C>T | synonymous_variant | 0.42 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304064 | c.1134G>C | synonymous_variant | 0.39 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304067 | c.1137G>C | synonymous_variant | 0.37 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304076 | c.1146C>G | synonymous_variant | 0.39 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304079 | c.1149A>G | synonymous_variant | 0.39 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304091 | p.Asp387Glu | missense_variant | 0.41 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304092 | p.Met388Leu | missense_variant | 0.41 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304104 | c.1174C>T | synonymous_variant | 0.46 | clofazimine | Not assoc w R - Interim |
pretomanid | ||||||
delamanid | Not assoc w R - Interim | |||||
fbiC | 1304118 | c.1188C>G | synonymous_variant | 0.51 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304127 | c.1197A>G | synonymous_variant | 0.53 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304133 | c.1203G>C | synonymous_variant | 0.51 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304172 | c.1242G>T | synonymous_variant | 0.44 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304181 | c.1251G>T | synonymous_variant | 0.44 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304184 | c.1254G>C | synonymous_variant | 0.44 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304199 | c.1269C>T | synonymous_variant | 0.39 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304226 | c.1296C>G | synonymous_variant | 0.32 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304250 | c.1320C>T | synonymous_variant | 0.22 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304970 | c.2040G>C | synonymous_variant | 0.25 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304983 | c.2053C>T | synonymous_variant | 0.27 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304994 | c.2064A>G | synonymous_variant | 0.28 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304995 | c.2065T>C | synonymous_variant | 0.27 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305012 | c.2082G>C | synonymous_variant | 0.29 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305015 | c.2085G>C | synonymous_variant | 0.28 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305021 | c.2091C>A | synonymous_variant | 0.29 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305024 | c.2094C>T | synonymous_variant | 0.28 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305027 | c.2097G>A | synonymous_variant | 0.27 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305033 | c.2103T>C | synonymous_variant | 0.3 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305042 | c.2112A>G | synonymous_variant | 0.32 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305063 | c.2133G>C | synonymous_variant | 0.31 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305069 | c.2139G>C | synonymous_variant | 0.29 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305075 | c.2145T>C | synonymous_variant | 0.3 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305078 | c.2148A>T | synonymous_variant | 0.29 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305081 | c.2151G>C | synonymous_variant | 0.28 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305090 | c.2160C>T | synonymous_variant | 0.26 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305096 | c.2166T>C | synonymous_variant | 0.24 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305099 | c.2169T>C | synonymous_variant | 0.23 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305102 | c.2172C>T | synonymous_variant | 0.23 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305267 | c.2337C>G | synonymous_variant | 0.2 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305276 | c.2346G>C | synonymous_variant | 0.25 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305282 | c.2352T>C | synonymous_variant | 0.25 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305300 | c.2370A>G | synonymous_variant | 0.25 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305303 | c.2373T>G | synonymous_variant | 0.25 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305306 | c.2376A>T | synonymous_variant | 0.26 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305309 | c.2379G>C | synonymous_variant | 0.26 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305310 | p.Arg794Glu | missense_variant | 0.27 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305336 | c.2406T>C | synonymous_variant | 0.31 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305361 | c.2431C>T | synonymous_variant | 0.27 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305372 | c.2442G>A | synonymous_variant | 0.24 | clofazimine | Not assoc w R - Interim |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305405 | c.2475A>G | synonymous_variant | 0.21 | clofazimine | Not assoc w R - Interim |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305411 | c.2481C>G | synonymous_variant | 0.21 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
sigE | 1364676 | c.264C>G | synonymous_variant | 0.33 | pyrazinamide | |
sigE | 1364685 | c.273C>T | synonymous_variant | 0.33 | pyrazinamide | |
sigE | 1364688 | c.276C>T | synonymous_variant | 0.34 | pyrazinamide | Not assoc w R - Interim |
sigE | 1364704 | c.292C>T | synonymous_variant | 0.36 | pyrazinamide | |
sigE | 1364709 | c.297T>C | synonymous_variant | 0.36 | pyrazinamide | |
sigE | 1364718 | c.306C>T | synonymous_variant | 0.35 | pyrazinamide | |
sigE | 1364727 | c.315C>T | synonymous_variant | 0.35 | pyrazinamide | |
sigE | 1364729 | p.Gln106Pro | missense_variant | 0.35 | pyrazinamide | |
sigE | 1364733 | p.His107Gln | missense_variant | 0.35 | pyrazinamide | |
sigE | 1364736 | c.324T>C | synonymous_variant | 0.34 | pyrazinamide | Not assoc w R - Interim |
sigE | 1364739 | c.327C>T | synonymous_variant | 0.35 | pyrazinamide | Not assoc w R - Interim |
sigE | 1364742 | c.330A>G | synonymous_variant | 0.35 | pyrazinamide | |
sigE | 1364751 | c.339C>G | synonymous_variant | 0.38 | pyrazinamide | |
sigE | 1364763 | c.351T>C | synonymous_variant | 0.37 | pyrazinamide | |
sigE | 1364772 | c.360G>T | synonymous_variant | 0.35 | pyrazinamide | |
sigE | 1364781 | c.369G>C | synonymous_variant | 0.3 | pyrazinamide | |
sigE | 1364784 | c.372C>T | synonymous_variant | 0.29 | pyrazinamide | |
sigE | 1364790 | c.378T>C | synonymous_variant | 0.31 | pyrazinamide | |
sigE | 1364799 | c.387G>C | synonymous_variant | 0.29 | pyrazinamide | |
sigE | 1364811 | c.399A>G | synonymous_variant | 0.27 | pyrazinamide | |
sigE | 1364820 | c.408A>G | synonymous_variant | 0.24 | pyrazinamide | |
sigE | 1364835 | c.423C>G | synonymous_variant | 0.22 | pyrazinamide | |
sigE | 1364839 | c.427T>C | synonymous_variant | 0.22 | pyrazinamide | |
sigE | 1364844 | c.432C>T | synonymous_variant | 0.21 | pyrazinamide | |
sigE | 1364847 | c.435G>C | synonymous_variant | 0.22 | pyrazinamide | |
sigE | 1364862 | c.450C>G | synonymous_variant | 0.22 | pyrazinamide | |
sigE | 1364868 | c.456T>C | synonymous_variant | 0.22 | pyrazinamide | |
sigE | 1364889 | c.477A>G | synonymous_variant | 0.22 | pyrazinamide | Not assoc w R - Interim |
sigE | 1364895 | p.Glu161Asp | missense_variant | 0.21 | pyrazinamide | |
embR | 1416433 | c.913_915delGCCinsTG | frameshift_variant&missense_variant | 0.27 | ethambutol | Uncertain significance |
embR | 1416450 | p.Gly300Ser | missense_variant | 0.23 | ethambutol | |
embR | 1416454 | c.894T>A | synonymous_variant | 0.25 | ethambutol | |
embR | 1416457 | c.891G>C | synonymous_variant | 0.21 | ethambutol | |
embR | 1416465 | p.Ile295Val | missense_variant | 0.2 | ethambutol | |
embR | 1416496 | c.852G>C | synonymous_variant | 0.23 | ethambutol | |
embR | 1416499 | p.Ala283Val | missense_variant | 0.23 | ethambutol | |
embR | 1416514 | c.834T>C | synonymous_variant | 0.24 | ethambutol | |
embR | 1416538 | c.810T>C | synonymous_variant | 0.24 | ethambutol | |
embR | 1416544 | c.804C>A | synonymous_variant | 0.22 | ethambutol | |
embR | 1416547 | c.801A>G | synonymous_variant | 0.2 | ethambutol | |
atpE | 1461071 | c.27C>G | synonymous_variant | 0.21 | bedaquiline | |
atpE | 1461113 | c.69C>T | synonymous_variant | 0.36 | bedaquiline | |
atpE | 1461149 | c.105T>G | synonymous_variant | 0.44 | bedaquiline | |
atpE | 1461161 | c.117C>T | synonymous_variant | 0.43 | bedaquiline | |
atpE | 1461182 | c.138A>G | synonymous_variant | 0.42 | bedaquiline | |
atpE | 1461185 | c.141G>A | synonymous_variant | 0.42 | bedaquiline | |
atpE | 1461197 | c.153A>G | synonymous_variant | 0.41 | bedaquiline | |
atpE | 1461219 | c.175T>C | synonymous_variant | 0.35 | bedaquiline | |
atpE | 1461233 | c.189A>G | synonymous_variant | 0.31 | bedaquiline | |
atpE | 1461251 | c.207G>C | synonymous_variant | 0.23 | bedaquiline | |
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
rrs | 1472489 | n.644A>G | non_coding_transcript_exon_variant | 0.53 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472969 | n.1124A>G | non_coding_transcript_exon_variant | 0.48 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472970 | n.1125C>G | non_coding_transcript_exon_variant | 0.47 | streptomycin | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472977 | n.1132G>C | non_coding_transcript_exon_variant | 0.46 | streptomycin | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472978 | n.1133T>C | non_coding_transcript_exon_variant | 0.47 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473104 | n.1259C>T | non_coding_transcript_exon_variant | 0.52 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473123 | n.1278delAinsTT | non_coding_transcript_exon_variant | 0.52 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
rrs | 1473290 | n.1445C>T | non_coding_transcript_exon_variant | 0.39 | streptomycin | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrl | 1473789 | n.132G>A | non_coding_transcript_exon_variant | 0.37 | capreomycin | |
linezolid | ||||||
rrl | 1473797 | n.140G>T | non_coding_transcript_exon_variant | 0.36 | capreomycin | |
linezolid | ||||||
rrl | 1473806 | n.149C>T | non_coding_transcript_exon_variant | 0.32 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1473813 | n.156C>T | non_coding_transcript_exon_variant | 0.31 | capreomycin | |
linezolid | ||||||
rrl | 1473877 | n.220G>A | non_coding_transcript_exon_variant | 0.22 | capreomycin | |
linezolid | ||||||
rrl | 1474009 | n.352A>G | non_coding_transcript_exon_variant | 0.21 | capreomycin | |
linezolid | ||||||
rrl | 1474028 | n.371T>C | non_coding_transcript_exon_variant | 0.25 | capreomycin | |
linezolid | ||||||
rrl | 1474061 | n.404T>C | non_coding_transcript_exon_variant | 0.32 | capreomycin | |
linezolid | ||||||
rrl | 1474103 | n.446A>T | non_coding_transcript_exon_variant | 0.41 | capreomycin | |
linezolid | ||||||
rrl | 1474106 | n.449A>G | non_coding_transcript_exon_variant | 0.41 | capreomycin | |
linezolid | ||||||
rrl | 1474110 | n.453A>G | non_coding_transcript_exon_variant | 0.43 | capreomycin | |
linezolid | ||||||
rrl | 1474140 | n.483C>T | non_coding_transcript_exon_variant | 0.45 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474151 | n.494C>T | non_coding_transcript_exon_variant | 0.45 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474181 | n.524C>T | non_coding_transcript_exon_variant | 0.44 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474291 | n.635_649delTTCCTCTCCGGAGGA | non_coding_transcript_exon_variant | 0.34 | capreomycin | |
linezolid | ||||||
rrl | 1474308 | n.651G>T | non_coding_transcript_exon_variant | 0.3 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474310 | n.653T>G | non_coding_transcript_exon_variant | 0.3 | capreomycin | |
linezolid | ||||||
rrl | 1474362 | n.705A>G | non_coding_transcript_exon_variant | 0.39 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474412 | n.756_768delACCCACACGCGCA | non_coding_transcript_exon_variant | 0.35 | capreomycin | |
linezolid | ||||||
rrl | 1474428 | n.771C>T | non_coding_transcript_exon_variant | 0.33 | capreomycin | |
linezolid | ||||||
rrl | 1474429 | n.772G>C | non_coding_transcript_exon_variant | 0.34 | capreomycin | |
linezolid | ||||||
rrl | 1474431 | n.774G>C | non_coding_transcript_exon_variant | 0.33 | capreomycin | |
linezolid | ||||||
rrl | 1474434 | n.777_778insAAGGG | non_coding_transcript_exon_variant | 0.34 | capreomycin | |
linezolid | ||||||
rrl | 1474437 | n.781_782delAA | non_coding_transcript_exon_variant | 0.35 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474447 | n.790G>A | non_coding_transcript_exon_variant | 0.38 | capreomycin | |
linezolid | ||||||
rrl | 1474639 | n.982G>A | non_coding_transcript_exon_variant | 0.65 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474716 | n.1059A>C | non_coding_transcript_exon_variant | 0.55 | capreomycin | |
linezolid | ||||||
rrl | 1474719 | n.1062G>A | non_coding_transcript_exon_variant | 0.55 | capreomycin | |
linezolid | ||||||
rrl | 1474794 | n.1137C>A | non_coding_transcript_exon_variant | 0.5 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474831 | n.1174A>G | non_coding_transcript_exon_variant | 0.49 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474961 | n.1304T>G | non_coding_transcript_exon_variant | 0.35 | capreomycin | |
linezolid | ||||||
rrl | 1474962 | n.1305T>C | non_coding_transcript_exon_variant | 0.35 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474963 | n.1306G>A | non_coding_transcript_exon_variant | 0.35 | capreomycin | |
linezolid | ||||||
rrl | 1474964 | n.1307T>A | non_coding_transcript_exon_variant | 0.33 | capreomycin | |
linezolid | ||||||
rrl | 1475006 | n.1349A>G | non_coding_transcript_exon_variant | 0.37 | capreomycin | |
linezolid | ||||||
rrl | 1475252 | n.1595C>T | non_coding_transcript_exon_variant | 0.3 | capreomycin | |
linezolid | ||||||
rrl | 1475266 | n.1609T>C | non_coding_transcript_exon_variant | 0.32 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475291 | n.1634A>C | non_coding_transcript_exon_variant | 0.37 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475315 | n.1658A>T | non_coding_transcript_exon_variant | 0.39 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475333 | n.1676T>C | non_coding_transcript_exon_variant | 0.39 | capreomycin | |
linezolid | ||||||
rrl | 1475355 | n.1698C>T | non_coding_transcript_exon_variant | 0.36 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475369 | n.1712G>T | non_coding_transcript_exon_variant | 0.32 | capreomycin | |
linezolid | ||||||
rrl | 1475505 | n.1848G>A | non_coding_transcript_exon_variant | 0.37 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475526 | n.1869C>A | non_coding_transcript_exon_variant | 0.42 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475659 | n.2002G>A | non_coding_transcript_exon_variant | 0.53 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475988 | n.2331A>G | non_coding_transcript_exon_variant | 0.44 | capreomycin | Not assoc w R |
linezolid | Uncertain significance | |||||
rrl | 1476035 | n.2378G>A | non_coding_transcript_exon_variant | 0.43 | capreomycin | |
linezolid | ||||||
rrl | 1476086 | n.2429G>A | non_coding_transcript_exon_variant | 0.4 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476089 | n.2432T>C | non_coding_transcript_exon_variant | 0.4 | capreomycin | |
linezolid | ||||||
rrl | 1476095 | n.2438C>G | non_coding_transcript_exon_variant | 0.38 | capreomycin | |
linezolid | ||||||
rrl | 1476103 | n.2446C>G | non_coding_transcript_exon_variant | 0.36 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476105 | n.2448G>A | non_coding_transcript_exon_variant | 0.35 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476106 | n.2449A>T | non_coding_transcript_exon_variant | 0.36 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476110 | n.2453G>C | non_coding_transcript_exon_variant | 0.35 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476115 | n.2458T>C | non_coding_transcript_exon_variant | 0.38 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476117 | n.2460G>C | non_coding_transcript_exon_variant | 0.4 | capreomycin | |
linezolid | ||||||
rrl | 1476256 | n.2599A>C | non_coding_transcript_exon_variant | 0.53 | capreomycin | |
linezolid | ||||||
rrl | 1476529 | n.2872A>G | non_coding_transcript_exon_variant | 0.4 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476583 | n.2926G>C | non_coding_transcript_exon_variant | 0.37 | capreomycin | |
linezolid | ||||||
rrl | 1476597 | n.2940G>A | non_coding_transcript_exon_variant | 0.37 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476628 | n.2971T>A | non_coding_transcript_exon_variant | 0.37 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476675 | n.3018C>G | non_coding_transcript_exon_variant | 0.35 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476679 | n.3022T>C | non_coding_transcript_exon_variant | 0.36 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476689 | n.3032A>T | non_coding_transcript_exon_variant | 0.34 | capreomycin | |
linezolid | ||||||
rrl | 1476690 | n.3033C>T | non_coding_transcript_exon_variant | 0.33 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476693 | n.3036G>A | non_coding_transcript_exon_variant | 0.33 | capreomycin | |
linezolid | ||||||
rrl | 1476695 | n.3038T>A | non_coding_transcript_exon_variant | 0.33 | capreomycin | |
linezolid | ||||||
rrl | 1476723 | n.3066T>A | non_coding_transcript_exon_variant | 0.31 | capreomycin | |
linezolid | ||||||
rrl | 1476726 | n.3069A>G | non_coding_transcript_exon_variant | 0.29 | capreomycin | |
linezolid | ||||||
rrl | 1476732 | n.3075T>C | non_coding_transcript_exon_variant | 0.28 | capreomycin | |
linezolid | ||||||
rrl | 1476757 | n.3100T>C | non_coding_transcript_exon_variant | 0.22 | capreomycin | |
linezolid | ||||||
inhA | 1673580 | c.-622T>C | upstream_gene_variant | 0.19 | ethionamide | |
isoniazid | Uncertain significance | |||||
inhA | 1673589 | c.-613A>C | upstream_gene_variant | 0.24 | ethionamide | |
isoniazid | ||||||
inhA | 1673595 | c.-607A>C | upstream_gene_variant | 0.25 | ethionamide | |
isoniazid | ||||||
fabG1 | 1673596 | p.Lys53Glu | missense_variant | 0.25 | ethionamide | |
isoniazid | ||||||
inhA | 1673607 | c.-595T>C | upstream_gene_variant | 0.35 | ethionamide | |
isoniazid | ||||||
inhA | 1673616 | c.-586A>G | upstream_gene_variant | 0.36 | ethionamide | |
isoniazid | ||||||
fabG1 | 1673633 | p.Ser65Asn | missense_variant | 0.41 | ethionamide | |
isoniazid | ||||||
inhA | 1673643 | c.-559C>A | upstream_gene_variant | 0.42 | ethionamide | |
isoniazid | ||||||
fabG1 | 1673657 | p.Thr73Lys | missense_variant | 0.39 | ethionamide | |
isoniazid | ||||||
fabG1 | 1673659 | p.Ala74Gln | missense_variant | 0.39 | ethionamide | |
isoniazid | ||||||
inhA | 1673664 | c.-538A>G | upstream_gene_variant | 0.39 | ethionamide | |
isoniazid | ||||||
inhA | 1673667 | c.-535A>G | upstream_gene_variant | 0.38 | ethionamide | |
isoniazid | ||||||
inhA | 1673682 | c.-520G>A | upstream_gene_variant | 0.4 | ethionamide | |
isoniazid | ||||||
inhA | 1673712 | c.-490A>G | upstream_gene_variant | 0.38 | ethionamide | |
isoniazid | ||||||
inhA | 1673713 | c.-489T>G | upstream_gene_variant | 0.38 | ethionamide | |
isoniazid | Uncertain significance | |||||
inhA | 1673724 | c.-478A>G | upstream_gene_variant | 0.4 | ethionamide | |
isoniazid | ||||||
inhA | 1673730 | c.-472C>G | upstream_gene_variant | 0.39 | ethionamide | |
isoniazid | ||||||
inhA | 1673742 | c.-460C>T | upstream_gene_variant | 0.38 | ethionamide | |
isoniazid | Uncertain significance | |||||
inhA | 1673748 | c.-454A>G | upstream_gene_variant | 0.38 | ethionamide | |
isoniazid | ||||||
inhA | 1673757 | c.-445G>A | upstream_gene_variant | 0.4 | ethionamide | |
isoniazid | ||||||
fabG1 | 1673767 | p.Asn110Asp | missense_variant | 0.43 | ethionamide | |
isoniazid | ||||||
inhA | 1673784 | c.-418G>A | upstream_gene_variant | 0.42 | ethionamide | |
isoniazid | ||||||
inhA | 1673808 | c.-394A>G | upstream_gene_variant | 0.48 | ethionamide | |
isoniazid | ||||||
inhA | 1673811 | c.-391G>A | upstream_gene_variant | 0.47 | ethionamide | |
isoniazid | ||||||
inhA | 1673814 | c.-388C>G | upstream_gene_variant | 0.48 | ethionamide | |
isoniazid | ||||||
inhA | 1673826 | c.-376C>A | upstream_gene_variant | 0.47 | ethionamide | |
isoniazid | ||||||
fabG1 | 1673830 | p.Lys131Arg | missense_variant | 0.45 | ethionamide | |
isoniazid | ||||||
inhA | 1673838 | c.-364T>C | upstream_gene_variant | 0.44 | ethionamide | |
isoniazid | ||||||
inhA | 1673841 | c.-361A>G | upstream_gene_variant | 0.45 | ethionamide | |
isoniazid | ||||||
inhA | 1673847 | c.-355A>C | upstream_gene_variant | 0.46 | ethionamide | |
isoniazid | ||||||
inhA | 1673901 | c.-301A>G | upstream_gene_variant | 0.47 | ethionamide | |
isoniazid | ||||||
inhA | 1673916 | c.-286A>T | upstream_gene_variant | 0.44 | ethionamide | |
isoniazid | ||||||
inhA | 1673922 | c.-280T>C | upstream_gene_variant | 0.42 | ethionamide | |
isoniazid | ||||||
inhA | 1673946 | c.-256C>G | upstream_gene_variant | 0.38 | ethionamide | |
isoniazid | ||||||
fabG1 | 1673950 | p.Leu171Met | missense_variant | 0.35 | ethionamide | |
isoniazid | ||||||
inhA | 1673961 | c.-241A>C | upstream_gene_variant | 0.35 | ethionamide | |
isoniazid | ||||||
inhA | 1673991 | c.-211C>T | upstream_gene_variant | 0.36 | ethionamide | |
isoniazid | ||||||
inhA | 1674003 | c.-199C>G | upstream_gene_variant | 0.32 | ethionamide | |
isoniazid | ||||||
inhA | 1674033 | c.-169T>C | upstream_gene_variant | 0.26 | ethionamide | |
isoniazid | ||||||
fabG1 | 1674037 | p.Gln200Glu | missense_variant | 0.25 | ethionamide | |
isoniazid | ||||||
inhA | 1674045 | c.-157G>A | upstream_gene_variant | 0.21 | ethionamide | |
isoniazid | ||||||
inhA | 1674054 | c.-148T>C | upstream_gene_variant | 0.19 | ethionamide | |
isoniazid | ||||||
inhA | 1674378 | c.177G>A | synonymous_variant | 0.22 | ethionamide | |
isoniazid | ||||||
inhA | 1674387 | c.186A>G | synonymous_variant | 0.21 | ethionamide | |
isoniazid | ||||||
inhA | 1674471 | c.270G>T | synonymous_variant | 0.25 | ethionamide | |
isoniazid | ||||||
inhA | 1674474 | c.273G>C | synonymous_variant | 0.24 | ethionamide | |
isoniazid | ||||||
inhA | 1674477 | c.276G>C | synonymous_variant | 0.24 | ethionamide | |
isoniazid | ||||||
inhA | 1674480 | c.279T>C | synonymous_variant | 0.25 | ethionamide | |
isoniazid | ||||||
inhA | 1674486 | c.285T>C | synonymous_variant | 0.27 | ethionamide | |
isoniazid | ||||||
inhA | 1674489 | c.288G>C | synonymous_variant | 0.27 | ethionamide | |
isoniazid | ||||||
inhA | 1674519 | c.318C>T | synonymous_variant | 0.4 | ethionamide | |
isoniazid | ||||||
inhA | 1674522 | c.321G>C | synonymous_variant | 0.39 | ethionamide | |
isoniazid | ||||||
inhA | 1674542 | p.Ala114Asp | missense_variant | 0.43 | ethionamide | |
isoniazid | ||||||
inhA | 1674546 | c.345T>C | synonymous_variant | 0.43 | ethionamide | |
isoniazid | ||||||
inhA | 1674549 | c.348G>T | synonymous_variant | 0.43 | ethionamide | |
isoniazid | ||||||
inhA | 1674570 | c.369G>C | synonymous_variant | 0.49 | ethionamide | |
isoniazid | ||||||
inhA | 1674573 | c.372G>C | synonymous_variant | 0.49 | ethionamide | |
isoniazid | ||||||
inhA | 1674576 | c.375T>C | synonymous_variant | 0.49 | ethionamide | |
isoniazid | ||||||
inhA | 1674585 | c.384T>C | synonymous_variant | 0.5 | ethionamide | |
isoniazid | ||||||
inhA | 1674589 | p.Met130Leu | missense_variant | 0.52 | ethionamide | |
isoniazid | ||||||
inhA | 1674624 | c.423A>C | synonymous_variant | 0.59 | ethionamide | |
isoniazid | ||||||
inhA | 1674630 | c.429C>G | synonymous_variant | 0.6 | ethionamide | |
isoniazid | ||||||
inhA | 1674669 | c.468G>C | synonymous_variant | 0.52 | ethionamide | |
isoniazid | ||||||
inhA | 1674702 | c.501G>A | synonymous_variant | 0.54 | ethionamide | |
isoniazid | ||||||
inhA | 1674703 | c.502T>C | synonymous_variant | 0.54 | ethionamide | |
isoniazid | ||||||
inhA | 1674714 | c.513C>A | synonymous_variant | 0.54 | ethionamide | |
isoniazid | ||||||
inhA | 1674718 | c.517A>C | synonymous_variant | 0.55 | ethionamide | |
isoniazid | ||||||
inhA | 1674726 | c.525G>A | synonymous_variant | 0.55 | ethionamide | |
isoniazid | ||||||
inhA | 1674729 | c.528G>C | synonymous_variant | 0.56 | ethionamide | |
isoniazid | ||||||
inhA | 1674756 | c.555T>C | synonymous_variant | 0.54 | ethionamide | Not assoc w R - Interim |
isoniazid | Not assoc w R - Interim | |||||
inhA | 1674759 | c.558G>C | synonymous_variant | 0.53 | ethionamide | |
isoniazid | ||||||
inhA | 1674774 | c.573A>C | synonymous_variant | 0.5 | ethionamide | |
isoniazid | ||||||
inhA | 1674777 | c.576C>G | synonymous_variant | 0.5 | ethionamide | |
isoniazid | ||||||
inhA | 1674780 | c.579T>G | synonymous_variant | 0.5 | ethionamide | |
isoniazid | ||||||
inhA | 1674795 | c.594G>C | synonymous_variant | 0.5 | ethionamide | |
isoniazid | ||||||
inhA | 1674799 | p.Ser200Ala | missense_variant | 0.51 | ethionamide | |
isoniazid | ||||||
inhA | 1674834 | c.633C>G | synonymous_variant | 0.53 | ethionamide | |
isoniazid | ||||||
inhA | 1674846 | c.645C>A | synonymous_variant | 0.53 | ethionamide | |
isoniazid | ||||||
inhA | 1674858 | c.657G>A | synonymous_variant | 0.5 | ethionamide | |
isoniazid | ||||||
inhA | 1674861 | c.660G>A | synonymous_variant | 0.51 | ethionamide | |
isoniazid | ||||||
inhA | 1674883 | p.Ile228Val | missense_variant | 0.5 | ethionamide | Uncertain significance |
isoniazid | Uncertain significance | |||||
inhA | 1674888 | c.687C>T | synonymous_variant | 0.47 | ethionamide | |
isoniazid | ||||||
inhA | 1674894 | c.693C>T | synonymous_variant | 0.47 | ethionamide | |
isoniazid | ||||||
inhA | 1674903 | c.702T>C | synonymous_variant | 0.45 | ethionamide | |
isoniazid | ||||||
inhA | 1674904 | c.703_705delGCGinsCC | frameshift_variant&missense_variant | 0.44 | ethionamide | |
isoniazid | ||||||
inhA | 1674909 | c.708G>C | synonymous_variant | 0.46 | ethionamide | |
isoniazid | ||||||
inhA | 1674939 | c.738G>C | synonymous_variant | 0.52 | ethionamide | |
isoniazid | ||||||
inhA | 1674942 | c.741T>C | synonymous_variant | 0.53 | ethionamide | |
isoniazid | ||||||
inhA | 1674957 | c.756G>C | synonymous_variant | 0.51 | ethionamide | |
isoniazid | ||||||
inhA | 1674960 | c.759C>T | synonymous_variant | 0.51 | ethionamide | |
isoniazid | ||||||
inhA | 1674963 | c.762G>T | synonymous_variant | 0.52 | ethionamide | |
isoniazid | ||||||
inhA | 1674977 | p.Tyr259Phe | missense_variant | 0.55 | ethionamide | |
isoniazid | ||||||
rpsA | 1833256 | c.-286C>G | upstream_gene_variant | 0.42 | pyrazinamide | |
rpsA | 1833265 | c.-277A>G | upstream_gene_variant | 0.42 | pyrazinamide | |
rpsA | 1833268 | c.-274C>G | upstream_gene_variant | 0.41 | pyrazinamide | |
rpsA | 1833277 | c.-265C>G | upstream_gene_variant | 0.39 | pyrazinamide | |
rpsA | 1833283 | c.-259C>G | upstream_gene_variant | 0.38 | pyrazinamide | |
rpsA | 1833316 | c.-226G>A | upstream_gene_variant | 0.28 | pyrazinamide | |
rpsA | 1833319 | c.-223C>G | upstream_gene_variant | 0.28 | pyrazinamide | |
rpsA | 1833320 | c.-222G>C | upstream_gene_variant | 0.29 | pyrazinamide | |
rpsA | 1833337 | c.-205G>C | upstream_gene_variant | 0.21 | pyrazinamide | |
rpsA | 1833568 | c.27G>C | synonymous_variant | 0.36 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1833595 | c.54T>C | synonymous_variant | 0.38 | pyrazinamide | |
rpsA | 1833613 | c.72C>A | synonymous_variant | 0.37 | pyrazinamide | |
rpsA | 1833715 | c.174G>A | synonymous_variant | 0.39 | pyrazinamide | |
rpsA | 1833718 | c.177C>T | synonymous_variant | 0.38 | pyrazinamide | |
rpsA | 1833724 | c.183C>G | synonymous_variant | 0.38 | pyrazinamide | |
rpsA | 1833727 | c.186G>C | synonymous_variant | 0.37 | pyrazinamide | |
rpsA | 1833742 | c.201A>G | synonymous_variant | 0.39 | pyrazinamide | |
rpsA | 1833745 | c.204G>C | synonymous_variant | 0.39 | pyrazinamide | |
rpsA | 1833754 | c.213G>A | synonymous_variant | 0.37 | pyrazinamide | |
rpsA | 1833760 | c.219C>T | synonymous_variant | 0.36 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1833784 | c.243C>G | synonymous_variant | 0.3 | pyrazinamide | |
rpsA | 1833787 | c.246C>G | synonymous_variant | 0.3 | pyrazinamide | |
rpsA | 1833790 | c.249T>C | synonymous_variant | 0.28 | pyrazinamide | |
rpsA | 1833793 | c.252C>T | synonymous_variant | 0.28 | pyrazinamide | |
rpsA | 1833802 | c.261A>G | synonymous_variant | 0.29 | pyrazinamide | |
rpsA | 1833811 | c.270G>T | synonymous_variant | 0.29 | pyrazinamide | |
rpsA | 1833841 | c.300C>G | synonymous_variant | 0.24 | pyrazinamide | |
rpsA | 1833847 | c.306C>T | synonymous_variant | 0.22 | pyrazinamide | |
rpsA | 1833868 | c.327C>T | synonymous_variant | 0.21 | pyrazinamide | |
rpsA | 1833874 | c.333T>C | synonymous_variant | 0.24 | pyrazinamide | |
rpsA | 1833928 | c.387G>C | synonymous_variant | 0.39 | pyrazinamide | |
rpsA | 1833940 | c.399C>G | synonymous_variant | 0.42 | pyrazinamide | |
rpsA | 1833979 | c.438T>C | synonymous_variant | 0.44 | pyrazinamide | |
rpsA | 1833988 | c.447C>T | synonymous_variant | 0.45 | pyrazinamide | |
rpsA | 1834009 | c.468C>G | synonymous_variant | 0.45 | pyrazinamide | |
rpsA | 1834015 | c.474G>C | synonymous_variant | 0.43 | pyrazinamide | |
rpsA | 1834021 | c.480C>T | synonymous_variant | 0.4 | pyrazinamide | |
rpsA | 1834030 | c.489C>G | synonymous_variant | 0.38 | pyrazinamide | |
rpsA | 1834033 | c.492C>T | synonymous_variant | 0.37 | pyrazinamide | |
rpsA | 1834097 | c.556_557delTCinsAG | synonymous_variant | 0.31 | pyrazinamide | |
rpsA | 1834102 | c.561T>C | synonymous_variant | 0.3 | pyrazinamide | |
rpsA | 1834105 | c.564C>G | synonymous_variant | 0.3 | pyrazinamide | |
rpsA | 1834108 | c.567C>T | synonymous_variant | 0.29 | pyrazinamide | |
rpsA | 1834150 | c.609G>C | synonymous_variant | 0.28 | pyrazinamide | |
rpsA | 1834153 | c.612T>C | synonymous_variant | 0.28 | pyrazinamide | |
rpsA | 1834154 | c.613_615delAACinsCG | frameshift_variant&missense_variant | 0.29 | pyrazinamide | Uncertain significance |
rpsA | 1834157 | c.616T>C | synonymous_variant | 0.28 | pyrazinamide | |
rpsA | 1834162 | c.621A>G | synonymous_variant | 0.31 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834165 | c.624A>G | synonymous_variant | 0.32 | pyrazinamide | |
rpsA | 1834177 | c.636A>C | synonymous_variant | 0.34 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834183 | c.642T>C | synonymous_variant | 0.34 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834186 | c.645C>G | synonymous_variant | 0.34 | pyrazinamide | |
rpsA | 1834189 | c.648G>C | synonymous_variant | 0.34 | pyrazinamide | |
rpsA | 1834207 | c.666C>T | synonymous_variant | 0.34 | pyrazinamide | |
rpsA | 1834213 | c.672G>A | synonymous_variant | 0.32 | pyrazinamide | |
rpsA | 1834225 | c.684C>G | synonymous_variant | 0.32 | pyrazinamide | |
rpsA | 1834234 | c.693G>T | synonymous_variant | 0.3 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834249 | c.708T>C | synonymous_variant | 0.28 | pyrazinamide | |
rpsA | 1834252 | c.711C>G | synonymous_variant | 0.3 | pyrazinamide | |
rpsA | 1834259 | c.718_720delCTAinsTG | frameshift_variant&stop_gained | 0.28 | pyrazinamide | Uncertain significance |
rpsA | 1834264 | c.723G>C | synonymous_variant | 0.3 | pyrazinamide | |
rpsA | 1834306 | c.765T>C | synonymous_variant | 0.32 | pyrazinamide | |
rpsA | 1834309 | c.768C>T | synonymous_variant | 0.3 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834348 | c.807T>C | synonymous_variant | 0.31 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834366 | c.825A>G | synonymous_variant | 0.29 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834375 | c.834G>A | synonymous_variant | 0.3 | pyrazinamide | |
rpsA | 1834390 | c.849G>C | synonymous_variant | 0.3 | pyrazinamide | |
rpsA | 1834411 | c.870T>G | synonymous_variant | 0.32 | pyrazinamide | |
rpsA | 1834417 | c.876G>C | synonymous_variant | 0.32 | pyrazinamide | |
rpsA | 1834423 | c.882G>C | synonymous_variant | 0.32 | pyrazinamide | |
rpsA | 1834450 | c.909G>A | synonymous_variant | 0.32 | pyrazinamide | |
rpsA | 1834451 | c.910T>C | synonymous_variant | 0.32 | pyrazinamide | |
rpsA | 1834459 | c.918G>A | synonymous_variant | 0.33 | pyrazinamide | |
rpsA | 1834465 | c.924T>C | synonymous_variant | 0.31 | pyrazinamide | |
rpsA | 1834468 | c.927A>G | synonymous_variant | 0.31 | pyrazinamide | |
rpsA | 1834474 | c.933C>T | synonymous_variant | 0.34 | pyrazinamide | |
rpsA | 1834483 | c.942G>A | synonymous_variant | 0.36 | pyrazinamide | |
rpsA | 1834489 | c.948T>C | synonymous_variant | 0.38 | pyrazinamide | |
rpsA | 1834495 | c.954G>A | synonymous_variant | 0.39 | pyrazinamide | |
rpsA | 1834499 | c.958C>T | synonymous_variant | 0.4 | pyrazinamide | |
rpsA | 1834528 | c.987T>C | synonymous_variant | 0.45 | pyrazinamide | |
rpsA | 1834546 | c.1005T>C | synonymous_variant | 0.44 | pyrazinamide | |
rpsA | 1834555 | c.1014T>C | synonymous_variant | 0.44 | pyrazinamide | |
rpsA | 1834606 | c.1065C>G | synonymous_variant | 0.38 | pyrazinamide | |
rpsA | 1834609 | c.1068T>C | synonymous_variant | 0.38 | pyrazinamide | |
rpsA | 1834615 | c.1074C>T | synonymous_variant | 0.38 | pyrazinamide | |
rpsA | 1834633 | c.1092A>G | synonymous_variant | 0.29 | pyrazinamide | |
rpsA | 1834639 | c.1098T>C | synonymous_variant | 0.28 | pyrazinamide | |
rpsA | 1834657 | c.1116G>A | synonymous_variant | 0.26 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834708 | c.1167C>T | synonymous_variant | 0.37 | pyrazinamide | |
rpsA | 1834720 | c.1179C>G | synonymous_variant | 0.41 | pyrazinamide | |
rpsA | 1834732 | c.1191T>C | synonymous_variant | 0.41 | pyrazinamide | |
rpsA | 1834733 | p.Ala398Pro | missense_variant | 0.41 | pyrazinamide | |
rpsA | 1834747 | c.1206A>G | synonymous_variant | 0.4 | pyrazinamide | |
rpsA | 1834753 | c.1212T>C | synonymous_variant | 0.39 | pyrazinamide | |
rpsA | 1834756 | c.1215G>A | synonymous_variant | 0.39 | pyrazinamide | |
rpsA | 1834765 | p.Glu408Asp | missense_variant | 0.4 | pyrazinamide | |
rpsA | 1834766 | p.Lys409Ala | missense_variant | 0.4 | pyrazinamide | |
rpsA | 1834789 | c.1248T>C | synonymous_variant | 0.4 | pyrazinamide | |
rpsA | 1834792 | c.1251G>C | synonymous_variant | 0.42 | pyrazinamide | |
rpsA | 1834829 | p.Ala430Thr | missense_variant | 0.25 | pyrazinamide | |
tsnR | 1853361 | c.-245T>C | upstream_gene_variant | 0.2 | linezolid | |
tsnR | 1853372 | c.-234A>G | upstream_gene_variant | 0.2 | linezolid | |
tsnR | 1853393 | c.-213C>G | upstream_gene_variant | 0.21 | linezolid | |
tsnR | 1853394 | c.-212_-211delCTinsGC | upstream_gene_variant | 0.21 | linezolid | |
tsnR | 1853417 | c.-189G>A | upstream_gene_variant | 0.23 | linezolid | |
tsnR | 1853420 | c.-186T>G | upstream_gene_variant | 0.23 | linezolid | |
tsnR | 1853429 | c.-177G>T | upstream_gene_variant | 0.22 | linezolid | |
tsnR | 1853444 | c.-162C>T | upstream_gene_variant | 0.25 | linezolid | |
tsnR | 1853459 | c.-147G>C | upstream_gene_variant | 0.29 | linezolid | |
tsnR | 1853462 | c.-144A>G | upstream_gene_variant | 0.24 | linezolid | |
tsnR | 1853465 | c.-141C>T | upstream_gene_variant | 0.24 | linezolid | |
tsnR | 1853474 | c.-132C>T | upstream_gene_variant | 0.24 | linezolid | |
tsnR | 1853477 | c.-129T>C | upstream_gene_variant | 0.22 | linezolid | |
tsnR | 1854300 | p.Leu232Pro | missense_variant | 1.0 | linezolid | Not assoc w R |
tlyA | 1917972 | c.33A>G | synonymous_variant | 0.99 | capreomycin | Not assoc w R |
bacA | 2064084 | c.645T>A | synonymous_variant | 0.25 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064096 | c.633C>T | synonymous_variant | 0.25 | streptomycin | |
kanamycin | ||||||
capreomycin | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
bacA | 2064099 | c.630G>T | synonymous_variant | 0.25 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064110 | p.Ser207Ala | missense_variant | 0.24 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
bacA | 2064114 | p.Ala205Gln | missense_variant | 0.25 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064126 | c.603C>T | synonymous_variant | 0.25 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064132 | p.Ala199Ser | missense_variant | 0.25 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064141 | c.588C>T | synonymous_variant | 0.25 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064150 | c.579T>C | synonymous_variant | 0.29 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064165 | c.564T>C | synonymous_variant | 0.36 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064210 | c.519A>G | synonymous_variant | 0.47 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064240 | c.489A>G | synonymous_variant | 0.35 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064243 | c.486A>C | synonymous_variant | 0.35 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064246 | c.481_483delCTCinsTG | frameshift_variant&synonymous_variant | 0.35 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
bacA | 2064253 | p.His159Gly | missense_variant | 0.35 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064258 | c.471A>G | synonymous_variant | 0.36 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064264 | c.465C>A | synonymous_variant | 0.35 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064269 | c.460A>C | synonymous_variant | 0.35 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064276 | c.451_453delATCinsGG | frameshift_variant&missense_variant | 0.34 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
bacA | 2064279 | c.450C>T | synonymous_variant | 0.33 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064306 | c.423C>G | synonymous_variant | 0.31 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064312 | c.417C>G | synonymous_variant | 0.27 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064315 | c.414G>C | synonymous_variant | 0.26 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064318 | c.409_411delACCinsGG | frameshift_variant&missense_variant | 0.26 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
bacA | 2064339 | c.388_390delGTGinsAC | frameshift_variant&missense_variant | 0.22 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
bacA | 2064348 | c.381T>G | synonymous_variant | 0.25 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064357 | c.372G>C | synonymous_variant | 0.26 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064369 | c.360A>T | synonymous_variant | 0.3 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064372 | c.357A>C | synonymous_variant | 0.3 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064375 | c.354G>A | synonymous_variant | 0.3 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064393 | c.334_336delACGinsGT | frameshift_variant&missense_variant | 0.31 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
bacA | 2064397 | p.Gly111Asp | missense_variant | 0.31 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064405 | c.324T>C | synonymous_variant | 0.3 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064417 | c.312G>A | synonymous_variant | 0.3 | streptomycin | Not assoc w R - Interim |
kanamycin | Not assoc w R - Interim | |||||
capreomycin | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
bacA | 2064426 | c.303G>A | synonymous_variant | 0.3 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064435 | c.294C>T | synonymous_variant | 0.29 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064456 | c.273A>G | synonymous_variant | 0.29 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064459 | c.270C>T | synonymous_variant | 0.29 | streptomycin | |
kanamycin | Not assoc w R - Interim | |||||
capreomycin | ||||||
amikacin | Not assoc w R - Interim | |||||
bacA | 2064468 | c.261A>G | synonymous_variant | 0.27 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064486 | c.243A>G | synonymous_variant | 0.22 | streptomycin | Not assoc w R - Interim |
kanamycin | Not assoc w R - Interim | |||||
capreomycin | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
ndh | 2101753 | c.1290C>G | synonymous_variant | 0.24 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2101765 | c.1278C>A | synonymous_variant | 0.25 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2101768 | c.1275C>G | synonymous_variant | 0.25 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2101771 | c.1272T>C | synonymous_variant | 0.25 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2101774 | c.1269T>C | synonymous_variant | 0.26 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2101777 | c.1266C>G | synonymous_variant | 0.27 | ethionamide | Not assoc w R - Interim |
delamanid | ||||||
isoniazid | Not assoc w R - Interim | |||||
ndh | 2101783 | c.1260T>C | synonymous_variant | 0.31 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2101795 | c.1248G>C | synonymous_variant | 0.34 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2101804 | c.1239T>G | synonymous_variant | 0.35 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2101822 | c.1221C>T | synonymous_variant | 0.38 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2101838 | p.Ala402Val | missense_variant | 0.4 | ethionamide | Uncertain significance |
delamanid | ||||||
isoniazid | Uncertain significance | |||||
ndh | 2101848 | c.1195C>T | synonymous_variant | 0.41 | ethionamide | Not assoc w R - Interim |
delamanid | Not assoc w R - Interim | |||||
isoniazid | Not assoc w R - Interim | |||||
ndh | 2101852 | c.1191G>T | synonymous_variant | 0.4 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2101888 | c.1153_1155delGTTinsCC | frameshift_variant&missense_variant | 0.32 | ethionamide | Uncertain significance |
delamanid | Uncertain significance | |||||
isoniazid | Uncertain significance | |||||
ndh | 2101891 | c.1152C>G | synonymous_variant | 0.29 | ethionamide | Not assoc w R - Interim |
delamanid | Not assoc w R - Interim | |||||
isoniazid | Not assoc w R - Interim | |||||
ndh | 2101894 | c.1149T>G | synonymous_variant | 0.29 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2101897 | c.1146C>T | synonymous_variant | 0.29 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2101906 | c.1137G>A | synonymous_variant | 0.29 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2101915 | c.1128T>C | synonymous_variant | 0.3 | ethionamide | Not assoc w R - Interim |
delamanid | Not assoc w R - Interim | |||||
isoniazid | Not assoc w R - Interim | |||||
ndh | 2101930 | c.1113C>T | synonymous_variant | 0.26 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2101939 | c.1104A>T | synonymous_variant | 0.25 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2102787 | c.256T>C | synonymous_variant | 0.25 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2102790 | c.253C>T | synonymous_variant | 0.26 | ethionamide | Not assoc w R - Interim |
delamanid | ||||||
isoniazid | Not assoc w R - Interim | |||||
ndh | 2102800 | c.243T>C | synonymous_variant | 0.28 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2102806 | c.237G>A | synonymous_variant | 0.31 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2102812 | c.231T>C | synonymous_variant | 0.35 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2102824 | c.219G>C | synonymous_variant | 0.38 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2102830 | c.213G>T | synonymous_variant | 0.36 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2102836 | c.207T>A | synonymous_variant | 0.35 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2102842 | c.201A>G | synonymous_variant | 0.35 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2102845 | c.198A>C | synonymous_variant | 0.35 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2102854 | c.189C>T | synonymous_variant | 0.39 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2102857 | c.186T>C | synonymous_variant | 0.4 | ethionamide | Not assoc w R - Interim |
delamanid | Not assoc w R - Interim | |||||
isoniazid | Not assoc w R - Interim | |||||
ndh | 2102866 | c.177C>G | synonymous_variant | 0.39 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2102872 | c.171A>G | synonymous_variant | 0.39 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2102883 | c.160C>T | synonymous_variant | 0.36 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2102902 | c.141C>T | synonymous_variant | 0.39 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2102929 | c.114T>C | synonymous_variant | 0.41 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2102938 | c.105G>C | synonymous_variant | 0.39 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2102959 | c.84C>T | synonymous_variant | 0.32 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2102962 | c.81A>C | synonymous_variant | 0.32 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2102965 | c.78G>A | synonymous_variant | 0.31 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2102977 | c.66T>A | synonymous_variant | 0.31 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2102980 | c.63A>G | synonymous_variant | 0.3 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2102989 | c.54G>C | synonymous_variant | 0.27 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2103003 | c.40A>C | synonymous_variant | 0.21 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
katG | 2154724 | p.Arg463Leu | missense_variant | 1.0 | isoniazid | Not assoc w R |
katG | 2155572 | c.540G>C | synonymous_variant | 0.2 | isoniazid | |
katG | 2155581 | c.531C>G | synonymous_variant | 0.21 | isoniazid | |
katG | 2155590 | c.522A>G | synonymous_variant | 0.21 | isoniazid | |
katG | 2155596 | c.516G>T | synonymous_variant | 0.21 | isoniazid | |
katG | 2155601 | p.Cys171Gly | missense_variant | 0.2 | isoniazid | Uncertain significance |
katG | 2155614 | c.498T>C | synonymous_variant | 0.21 | isoniazid | |
katG | 2155617 | c.495T>C | synonymous_variant | 0.22 | isoniazid | Not assoc w R - Interim |
katG | 2155632 | c.480A>C | synonymous_variant | 0.26 | isoniazid | |
katG | 2155637 | p.Leu159Ile | missense_variant | 0.26 | isoniazid | |
katG | 2155641 | p.Lys157Asn | missense_variant | 0.29 | isoniazid | Uncertain significance |
katG | 2155670 | c.442C>T | synonymous_variant | 0.33 | isoniazid | |
katG | 2155691 | c.421T>C | synonymous_variant | 0.33 | isoniazid | |
katG | 2155695 | c.417C>A | synonymous_variant | 0.34 | isoniazid | |
katG | 2155704 | c.408C>G | synonymous_variant | 0.32 | isoniazid | |
katG | 2155716 | c.396T>C | synonymous_variant | 0.28 | isoniazid | |
katG | 2155725 | c.387C>T | synonymous_variant | 0.27 | isoniazid | |
katG | 2155737 | c.375C>T | synonymous_variant | 0.25 | isoniazid | |
katG | 2155740 | p.Gly124Glu | missense_variant | 0.25 | isoniazid | |
katG | 2155743 | c.369G>C | synonymous_variant | 0.25 | isoniazid | |
katG | 2155747 | p.Ala122Gly | missense_variant | 0.25 | isoniazid | |
katG | 2155761 | c.351C>T | synonymous_variant | 0.26 | isoniazid | |
katG | 2155767 | c.345C>T | synonymous_variant | 0.25 | isoniazid | |
katG | 2155785 | c.327T>C | synonymous_variant | 0.21 | isoniazid | |
PPE35 | 2167926 | p.Leu896Ser | missense_variant | 1.0 | pyrazinamide | Not assoc w R |
Rv1979c | 2223293 | c.-129A>G | upstream_gene_variant | 1.0 | clofazimine | Not assoc w R |
bedaquiline | Not assoc w R - Interim | |||||
pncA | 2289047 | c.195C>T | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R |
pncA | 2289365 | c.-125delC | upstream_gene_variant | 1.0 | pyrazinamide | |
pncA | 2289913 | c.-672T>C | upstream_gene_variant | 0.2 | pyrazinamide | |
pncA | 2289916 | c.-675A>G | upstream_gene_variant | 0.21 | pyrazinamide | |
pncA | 2289925 | c.-684T>C | upstream_gene_variant | 0.2 | pyrazinamide | |
pncA | 2289961 | c.-720C>G | upstream_gene_variant | 0.2 | pyrazinamide | |
pncA | 2289978 | c.-737T>G | upstream_gene_variant | 0.21 | pyrazinamide | |
pncA | 2289991 | c.-750G>C | upstream_gene_variant | 0.2 | pyrazinamide | |
kasA | 2517962 | c.-153C>T | upstream_gene_variant | 0.28 | isoniazid | |
kasA | 2517989 | c.-126T>C | upstream_gene_variant | 0.24 | isoniazid | |
kasA | 2518248 | p.Ala45Val | missense_variant | 0.39 | isoniazid | |
kasA | 2518252 | c.138C>T | synonymous_variant | 0.4 | isoniazid | |
kasA | 2518255 | c.141A>G | synonymous_variant | 0.4 | isoniazid | |
kasA | 2518279 | c.165T>C | synonymous_variant | 0.39 | isoniazid | |
kasA | 2518282 | c.168A>G | synonymous_variant | 0.39 | isoniazid | |
kasA | 2518283 | c.169_171delGCGinsCC | frameshift_variant&missense_variant | 0.38 | isoniazid | |
kasA | 2518297 | c.183C>T | synonymous_variant | 0.39 | isoniazid | |
kasA | 2518300 | c.186T>C | synonymous_variant | 0.4 | isoniazid | |
kasA | 2518306 | c.192C>G | synonymous_variant | 0.39 | isoniazid | |
kasA | 2518312 | p.Asp66Glu | missense_variant | 0.37 | isoniazid | |
kasA | 2518321 | c.207C>T | synonymous_variant | 0.34 | isoniazid | |
kasA | 2518323 | p.Ser70Asn | missense_variant | 0.33 | isoniazid | |
kasA | 2518336 | c.222A>G | synonymous_variant | 0.29 | isoniazid | |
kasA | 2518339 | c.225C>G | synonymous_variant | 0.28 | isoniazid | |
kasA | 2518357 | c.243G>C | synonymous_variant | 0.22 | isoniazid | |
kasA | 2518570 | c.456G>C | synonymous_variant | 0.24 | isoniazid | |
kasA | 2518574 | c.460_462delATCinsGG | frameshift_variant&missense_variant | 0.24 | isoniazid | |
kasA | 2518579 | c.465T>C | synonymous_variant | 0.24 | isoniazid | |
kasA | 2518582 | c.468G>C | synonymous_variant | 0.24 | isoniazid | |
kasA | 2518588 | c.474T>C | synonymous_variant | 0.24 | isoniazid | |
kasA | 2518597 | c.483C>T | synonymous_variant | 0.24 | isoniazid | |
kasA | 2518603 | c.489G>A | synonymous_variant | 0.24 | isoniazid | |
kasA | 2518642 | c.528A>G | synonymous_variant | 0.23 | isoniazid | |
kasA | 2518648 | c.534C>T | synonymous_variant | 0.23 | isoniazid | |
kasA | 2518651 | c.537C>G | synonymous_variant | 0.23 | isoniazid | |
kasA | 2518663 | c.549T>G | synonymous_variant | 0.23 | isoniazid | |
kasA | 2518672 | c.558G>C | synonymous_variant | 0.19 | isoniazid | |
kasA | 2519203 | c.1089C>G | synonymous_variant | 0.29 | isoniazid | |
kasA | 2519218 | c.1104G>C | synonymous_variant | 0.29 | isoniazid | |
kasA | 2519230 | c.1116C>T | synonymous_variant | 0.28 | isoniazid | |
kasA | 2519234 | c.1120_1122delGAGinsCA | frameshift_variant&missense_variant | 0.28 | isoniazid | |
kasA | 2519239 | c.1125A>C | synonymous_variant | 0.28 | isoniazid | |
kasA | 2519242 | c.1128C>T | synonymous_variant | 0.29 | isoniazid | |
kasA | 2519255 | p.Asp381Asn | missense_variant | 0.27 | isoniazid | |
kasA | 2519263 | c.1149C>T | synonymous_variant | 0.28 | isoniazid | |
kasA | 2519266 | c.1152C>T | synonymous_variant | 0.27 | isoniazid | |
kasA | 2519272 | c.1158C>G | synonymous_variant | 0.27 | isoniazid | |
kasA | 2519281 | c.1167G>T | synonymous_variant | 0.25 | isoniazid | |
kasA | 2519287 | c.1173T>C | synonymous_variant | 0.25 | isoniazid | |
kasA | 2519295 | p.Tyr394Phe | missense_variant | 0.24 | isoniazid | |
kasA | 2519299 | c.1185C>T | synonymous_variant | 0.23 | isoniazid | |
kasA | 2519305 | c.1191A>G | synonymous_variant | 0.23 | isoniazid | |
kasA | 2519306 | p.Val398Ile | missense_variant | 0.22 | isoniazid | |
eis | 2715432 | c.-100C>T | upstream_gene_variant | 1.0 | amikacin | |
kanamycin | ||||||
ahpC | 2726105 | c.-88G>A | upstream_gene_variant | 1.0 | isoniazid | Not assoc w R |
folC | 2747202 | p.Leu133Met | missense_variant | 0.2 | para-aminosalicylic_acid | |
folC | 2747205 | p.Ala132Pro | missense_variant | 0.2 | para-aminosalicylic_acid | |
folC | 2747209 | p.Leu130Phe | missense_variant | 0.21 | para-aminosalicylic_acid | |
folC | 2747224 | c.375G>C | synonymous_variant | 0.28 | para-aminosalicylic_acid | |
folC | 2747230 | c.369C>A | synonymous_variant | 0.3 | para-aminosalicylic_acid | |
folC | 2747239 | c.360T>C | synonymous_variant | 0.34 | para-aminosalicylic_acid | |
folC | 2747248 | c.351G>C | synonymous_variant | 0.37 | para-aminosalicylic_acid | |
folC | 2747260 | c.339G>A | synonymous_variant | 0.38 | para-aminosalicylic_acid | |
folC | 2747289 | p.Pro104Ala | missense_variant | 0.41 | para-aminosalicylic_acid | |
folC | 2747290 | c.309A>G | synonymous_variant | 0.4 | para-aminosalicylic_acid | |
folC | 2747302 | c.297A>C | synonymous_variant | 0.41 | para-aminosalicylic_acid | |
folC | 2747317 | c.282C>A | synonymous_variant | 0.41 | para-aminosalicylic_acid | |
folC | 2747327 | p.Arg91Gln | missense_variant | 0.42 | para-aminosalicylic_acid | |
folC | 2747335 | c.264G>C | synonymous_variant | 0.38 | para-aminosalicylic_acid | |
folC | 2747341 | c.258C>G | synonymous_variant | 0.36 | para-aminosalicylic_acid | |
folC | 2747346 | c.253C>T | synonymous_variant | 0.34 | para-aminosalicylic_acid | |
folC | 2747347 | c.252G>A | synonymous_variant | 0.34 | para-aminosalicylic_acid | |
folC | 2747359 | c.240C>A | synonymous_variant | 0.33 | para-aminosalicylic_acid | |
folC | 2747374 | c.225G>A | synonymous_variant | 0.29 | para-aminosalicylic_acid | |
folC | 2747383 | c.216C>G | synonymous_variant | 0.26 | para-aminosalicylic_acid | |
folC | 2747395 | c.204T>C | synonymous_variant | 0.21 | para-aminosalicylic_acid | |
Rv2477c | 2782498 | c.1545C>T | synonymous_variant | 0.83 | ethambutol | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
streptomycin | Not assoc w R - Interim | |||||
levofloxacin | Not assoc w R | |||||
kanamycin | Not assoc w R | |||||
rifampicin | Not assoc w R | |||||
amikacin | Not assoc w R | |||||
Rv2477c | 2782858 | c.1185C>G | synonymous_variant | 0.22 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782864 | c.1179T>C | synonymous_variant | 0.22 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782876 | c.1167G>C | synonymous_variant | 0.26 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782882 | c.1161T>C | synonymous_variant | 0.28 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782888 | c.1155G>A | synonymous_variant | 0.31 | ethambutol | Not assoc w R - Interim |
moxifloxacin | ||||||