Rv0006 - c.-161T>G
Drug resistance types
28 Sensitive
0 RR-TB
5 HR-TB
1 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1;lineage9 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| La3;lineage4 | 1 |
| La1.7;lineage4.9 | 3 |
| La3;lineage4.9 | 7 |
| M.canetti;lineage4.9 | 2 |
| lineage4.9 | 19 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.2.1 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage4.5 | 1 |
| lineage4.3.3 | 1 |
| lineage4.1.2 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.3.2.1 | 1 |
| 1 | |
| lineage5.1.4 | 1 |
| lineage2.2.1 | 3 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.4.1.1 | 1 |
| lineage3 | 1 |
| lineage1.1.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 53 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR3283028 | Other | La3;lineage4 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR3675477 | Sensitive | lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR12708416 | Sensitive | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None |
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