Rv3696c - c.1074C>G


Drug resistance types
6 Sensitive 7 RR-TB 35 HR-TB 18 MDR-TB 0 Pre-XDR-TB 1 XDR-TB 42 Other
lineage Counts
lineage Count
lineage4.9 39
La3;lineage4 1
La1.2.BCG 1
M.canetti;lineage4.9 1
lineage6.1.1 2
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La1.7;lineage4.9 3
lineage3.1.2.2 1
lineage4.9;lineage9 1
lineage2.1;lineage4.3.2;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La2;lineage4.9 1
lineage4 2
La3;lineage4.9 8
La1.7 1
lineage4.3.1;lineage4.9;lineage6 1
lineage5.2 2
lineage4.1;lineage4.9 1
La1.7;M.canetti;lineage4.9 1
1
La1.6;lineage4 1
lineage4.6.2.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage2.2 3
lineage2.2.1 2
La1.6;La3;lineage4.9 2
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage4.9;lineage6.1.3 1
lineage2.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.9;lineage6.3 2
La2;lineage4.9;lineage9 1
La1.8.1 1
lineage4.2;lineage4.8.1;lineage4.9 1
lineage4.4.1.2 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage3.1;lineage9 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.2.1.2 1
lineage3 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage2.2.1.2;lineage7 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.9;lineage7 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.6.3;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 109
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR11662690 HR-TB lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR4798262 HR-TB La1.2.BCG None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR9787014 RR-TB lineage6.1.1 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
SRR6045548 Other lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR6045526 Other lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR323039 MDR-TB La2;lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR3797064 Other La3;lineage4.9 None
ERR4830353 HR-TB La1.7 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR9119500 MDR-TB lineage5.2 None
ERR3797086 Sensitive lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR5341456 Other lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045053 Other lineage4 None
ERR987722 MDR-TB None
SRR28351554 Other La1.6;lineage4 None
ERR11082350 MDR-TB lineage4.6.2.2 None
SRR5341330 Other lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR6046046 Other lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
SRR5535933 Other lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
SRR1172310 MDR-TB lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR3799304 RR-TB lineage6.1.1 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3283032 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR4815441 HR-TB lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR4817731 HR-TB lineage4.9 None
ERR3283010 Sensitive La1.8.1 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR4819422 HR-TB lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR736856 HR-TB lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
SRR3675441 RR-TB lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR1175127 Other lineage2.2.1.2 None
SRR6045217 Other lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR4798504 RR-TB lineage3 None
SRR20969708 HR-TB lineage2.2 None
ERR4820773 HR-TB lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR3283031 Other La3;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR26399490 Sensitive lineage4.9 None
ERR3797063 Other La3;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR3675248 Other lineage4.9 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR4819877 HR-TB lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4819241 Other lineage4.9 None