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SRA data
Rv3596c
- c.261C>T
Drug resistance types
4 Sensitive
3 RR-TB
39 HR-TB
14 MDR-TB
7 Pre-XDR-TB
2 XDR-TB
132 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
35
15
lineage2.1;lineage4.9
14
lineage2.2.1
11
lineage2.1;lineage4.9;lineage6.3
9
lineage4.9;lineage6.3
9
lineage4.1.2.1
9
lineage4.8
7
La3;lineage4.9
6
lineage2.1
5
Showing 1 to 10 of 71 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
201
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1063856
HR-TB
M.canetti;lineage4.9;lineage9
None
ERR11081258
Other
lineage4.8
None
ERR11252558
Other
lineage4.6.3;lineage4.9
None
ERR11252612
Other
La3;lineage4.9
None
ERR11465025
Other
lineage4.1.1.3
None
ERR11466499
Other
lineage4.3.4.1
None
ERR13261228
Pre-XDR-TB
lineage4.8
None
ERR13261230
Pre-XDR-TB
lineage4.3.3;lineage4.8
None
ERR13265528
Other
lineage4.9;lineage6.3
None
ERR13265748
Other
lineage4.9;lineage6.3
None
Showing 1 to 10 of 201 entries
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