Rv3596c - p.Ala757Ser
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
5 Sensitive
6 RR-TB
22 HR-TB
15 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
46 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La1.7;lineage4.9 | 6 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.9 | 32 |
| lineage4.3.2.1 | 1 |
| M.canetti;lineage1 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage4.1.2.1 | 2 |
| M.canetti;lineage4.9 | 3 |
| lineage4.2.1 | 1 |
| lineage4 | 1 |
| lineage4.2.1.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage2.2.1 | 3 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;lineage4.9 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage4.2;lineage4.9 | 3 |
| M.canetti;lineage4.2;lineage4.9 | 2 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| La1.7;M.canetti;lineage4.9 | 3 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage2.2.1.1 | 2 |
| M.canetti;lineage4.2 | 1 |
| lineage3.1;lineage9 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 95 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR13837869 | Other | lineage4.9 | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | ERR212123 | Other | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR29231479 | RR-TB | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | SRR13837979 | Other | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR4816478 | HR-TB | lineage4 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR29017081 | Sensitive | lineage4.9 | None | SRR13837868 | Other | lineage4.9 | None | SRR1180270 | Other | lineage2.2.1 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR13837494 | Other | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR13837606 | Other | lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR13837495 | Sensitive | lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR13861639 | Other | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR13838014 | Other | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR3439432 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | SRR13837980 | Other | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR13838015 | Other | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR161037 | Other | lineage4.9 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR13837867 | Other | lineage4.9 | None | SRR13861185 | Other | lineage4.9 | None | SRR13861217 | Other | lineage4.9 | None | SRR13861617 | Other | lineage4.9 | None | SRR13861219 | Other | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | SRR13837978 | Other | lineage4.9 | None | SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR13837493 | Other | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None |
|---|
