Rv0001 - c.1323C>T


Drug resistance types
3 Sensitive 7 RR-TB 16 HR-TB 12 MDR-TB 1 Pre-XDR-TB 1 XDR-TB 32 Other
lineage Counts
lineage Count
lineage4.9;lineage6.3 2
lineage4.2;lineage4.9 3
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 4
lineage2.1;lineage4.9 6
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage2.2.1 4
lineage4.9 7
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage4.1.3 2
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.3.2 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage2.2.1.1 3
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.7 1
lineage4.2.2.1 7
7
lineage3.1;lineage9 1
lineage3 1
lineage2.1;lineage6.3 2
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.2.BCG;La1.8.1 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage2.1 1
lineage4.2;lineage4.8.1;lineage4.9 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
M.canetti;lineage4.2;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
spoligotype Counts
spoligotype Count
None 72
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675524 Other lineage4.9;lineage6.3 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675214 Other lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR3804169 HR-TB lineage4.1.3 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR7496472 Other lineage4.9 None
ERR9117805 Other lineage4.3.2 None
SRR3675221 Other lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR3675457 Other lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR1180172 RR-TB lineage2.2.1 None
SRR1183144 RR-TB lineage2.2.1 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR7496523 Other lineage4.7 None
ERR2446447 Sensitive lineage4.2.2.1 nl
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR7496509 Other None
SRR25827418 XDR-TB lineage3.1;lineage9 None
SRR3675275 Other lineage4.9 None
ERR4800341 HR-TB lineage3 None
ERR8773550 MDR-TB lineage4.2.2.1 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4816466 HR-TB lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046066 Other lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR8773551 MDR-TB lineage4.2.2.1 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3275611 Sensitive lineage4.2.2.1 nl
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675572 Other None
ERR9117709 Other None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR7496517 Other None
SRR3675236 Other None
ERR11044686 MDR-TB lineage4.2.2.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR11068660 HR-TB lineage4.2.2.1 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR18213713 HR-TB None
ERR4816999 Other None
ERR2517356 Sensitive lineage4.2.2.1 nl