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SRA data
Rv0001
- c.1323C>T
Drug resistance types
5 Sensitive
3 RR-TB
16 HR-TB
8 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
42 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.2.2.1
8
lineage4.9
8
7
lineage2.1;lineage4.9
6
lineage2.2.1
5
lineage2.1;lineage4.9;lineage6.3
4
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
4
lineage4.2;lineage4.9
3
lineage2.2.1.1
3
lineage4.9;lineage6.3
2
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
76
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR11044686
MDR-TB
lineage4.2.2.1
None
ERR11068660
HR-TB
lineage4.2.2.1
None
ERR11252599
Other
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3
None
ERR13284852
MDR-TB
lineage4.2.2.1
None
ERR2026695
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
None
ERR2026696
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
None
ERR2026697
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR2026698
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR2446447
Sensitive
lineage4.2.2.1
nl
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