Rv0701 - c.-188G>A
Drug resistance types
4 Sensitive
1 RR-TB
16 HR-TB
6 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.9 | 13 |
| lineage3.1;lineage9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage2.2.1 | 1 |
| La1.7 | 1 |
| La1.7;lineage4.9 | 6 |
| lineage4.9;lineage9 | 2 |
| La2;lineage4.9;lineage9 | 1 |
| M.canetti;lineage4.9 | 2 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.5 | 1 |
| lineage3 | 3 |
| lineage3.1.2.2 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 44 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR29096410 | Other | lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR4830353 | Other | La1.7 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR400345 | Other | lineage4.9 | None | SRR29096150 | Other | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR29097026 | Other | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR400326 | Other | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR4798504 | RR-TB | lineage3 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR987722 | MDR-TB | None |
|---|
