Rv0529 - c.364_366delCTCinsTG

Drug resistance types
0 Sensitive 9 RR-TB 11 HR-TB 36 MDR-TB 1 Pre-XDR-TB 2 XDR-TB 30 Other
lineage Counts
lineage Count
La3;lineage2.1;lineage4.9;lineage6.3 2
lineage4.9 11
lineage2.2.1;lineage3 1
lineage4.9;lineage9 2
lineage2.1;lineage4.9 4
lineage4 1
La3;M.canetti;lineage2.1;lineage4.9 2
M.canetti;lineage1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 2
La2;lineage4.9;lineage9 1
M.canetti;lineage2.1;lineage4.9 13
lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage4.9 1
M.canetti;lineage2.1;lineage6.3 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
La3;M.canetti;lineage3.1 1
7
La3;M.canetti;lineage4.9 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage2.1;lineage4.9 2
lineage4.3.4.2.1 1
M.canetti;lineage2.1;lineage4 1
La3;lineage4.9 1
lineage2.2.1;lineage6.3 1
lineage4.2.2.2 1
lineage3.1.2.2 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 1
lineage4.1.2.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.1.1.1 1
M.canetti;lineage2.1;lineage4.1.2.1 1
M.canetti;lineage2.1;lineage3 1
lineage6.3.1 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;lineage1.1.2 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.6.2.2 1
lineage4.3.2 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
lineage2.1 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
lineage3.1;lineage9 1
lineage2.2 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.1;lineage6.3 1
spoligotype Counts
spoligotype Count
None 89
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
SRR3675461 RR-TB lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR26159043 Other lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR15014655 Other M.canetti;lineage1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR2229143 RR-TB lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
SRR1184381 MDR-TB None
ERR2514692 Other None
SRR25827682 Other None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675275 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR2513470 Other lineage4.2.2.2 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4820854 Other lineage4.1.2.1 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR987722 MDR-TB None
ERR212001 HR-TB None
SRR1196583 Other lineage4.9 None
ERR9787139 Other lineage6.3.1 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9117805 Other lineage4.3.2 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR4817060 Other None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR19303884 Other lineage2.1;lineage6.3 None