Rv0667 - c.2205G>C
Drug resistance types
94 Sensitive
9 RR-TB
24 HR-TB
20 MDR-TB
6 Pre-XDR-TB
1 XDR-TB
55 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| lineage2.2.1 | 16 |
| lineage4.9 | 77 |
| M.canetti;lineage4.9 | 2 |
| lineage4.9;lineage7 | 3 |
| lineage2.2.1;lineage4.9 | 2 |
| M.canetti;lineage4.2 | 1 |
| lineage4.1.2.1 | 32 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| lineage4.6.1.2 | 3 |
| La1.7 | 2 |
| La1.7;lineage4.9 | 5 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La1.6;La3;lineage4.9 | 2 |
| lineage3 | 3 |
| lineage2.2.2 | 1 |
| lineage4.8 | 2 |
| lineage1.2.2.2 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La1.3 | 2 |
| lineage4.3.3 | 2 |
| lineage2.2.1.1 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| 1 | |
| lineage3.1;lineage9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 2 |
| lineage4.3.2.1 | 2 |
| lineage5.1.1 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4 | 3 |
| lineage4.8.1 | 1 |
| lineage2;lineage4 | 1 |
| lineage4.6.4;lineage4.9 | 1 |
| lineage4.7 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| lineage2;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage4.9;lineage9 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 209 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR3675441 | Other | lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR9121497 | Sensitive | lineage4.1.2.1 | None | SRR13838013 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR3439432 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR11068964 | Sensitive | lineage4.1.2.1 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR21691126 | Sensitive | lineage4.1.2.1 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR2446143 | Sensitive | lineage4.1.2.1 | nl | SRR3675446 | RR-TB | lineage4.9 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR7131030 | Other | lineage4.1.2.1 | None | ERR4821791 | Other | lineage4.1.2.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR13861614 | Sensitive | lineage4.9 | None | SRR13861296 | Sensitive | lineage4.9 | None | SRR13861615 | Sensitive | lineage4.9 | None | ERR4769552 | Sensitive | La1.3 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR13837866 | Sensitive | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR6832249 | Sensitive | lineage2.2.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR21690736 | Sensitive | lineage4.1.2.1 | None | SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR2517265 | Sensitive | lineage4.1.2.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR13837491 | Sensitive | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR9121776 | Sensitive | lineage4.1.2.1 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4817188 | Sensitive | lineage4.1.2.1 | gb | ERR2884638 | Sensitive | lineage4.1.2.1 | es | ERR2884675 | Sensitive | lineage4.1.2.1 | es | ERR2884620 | Sensitive | lineage4.1.2.1 | es | ERR2884725 | Sensitive | lineage4.1.2.1 | es | SRR1180312 | Sensitive | lineage4.9 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR4796577 | HR-TB | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR2517346 | Sensitive | lineage4.1.2.1 | nl | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR1181403 | Other | lineage4.9 | None | SRR13837492 | Sensitive | lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR1180391 | Sensitive | lineage4.9 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR3275888 | Sensitive | lineage4.1.2.1 | nl | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR3275566 | Sensitive | lineage4.1.2.1 | nl | ERR3276120 | Sensitive | lineage4.1.2.1 | nl | ERR4816964 | Sensitive | lineage4.9 | None | SRR13837865 | Sensitive | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR751345 | Other | lineage5.1.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR3675582 | Other | lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR3283044 | Other | lineage4 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR6046376 | Other | lineage3 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR13270271 | Sensitive | lineage4.1.2.1 | None | SRR1180446 | Other | lineage4.9 | None | SRR6832787 | Sensitive | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR13837976 | Sensitive | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR13838012 | Sensitive | lineage4.9 | None | SRR1180270 | Other | lineage2.2.1 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR4188322 | Other | lineage4.6.4;lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR2517205 | Sensitive | lineage4.1.2.1 | nl | ERR2517645 | Sensitive | lineage4.1.2.1 | nl | SRR1180406 | Sensitive | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR9121170 | Sensitive | lineage4.1.2.1 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1172717 | Sensitive | lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR13837977 | Sensitive | lineage4.9 | None | ERR2446478 | Sensitive | lineage4.1.2.1 | nl | ERR4830353 | Other | La1.7 | None | ERR3275197 | Sensitive | lineage4.1.2.1 | nl | ERR3276093 | Sensitive | lineage4.1.2.1 | nl | ERR6359066 | HR-TB | lineage4.9 | None | ERR3276137 | Sensitive | lineage4.1.2.1 | nl | ERR3275850 | Sensitive | lineage4.1.2.1 | nl | SRR1175487 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | ERR13266684 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046593 | Other | lineage4.9 | None | SRR29050859 | Other | lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR21690600 | Sensitive | lineage4.1.2.1 | None | SRR7496471 | Sensitive | lineage4 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR4819933 | Sensitive | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR9121278 | Sensitive | lineage4.1.2.1 | None | ERR9786076 | Sensitive | lineage3 | None | SRR3675280 | RR-TB | lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR21690802 | Sensitive | lineage4.1.2.1 | None | SRR13861215 | Sensitive | lineage4.9 | None |
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