Rv0407 - c.760T>C
Drug resistance types
73 Sensitive
22 RR-TB
140 HR-TB
57 MDR-TB
5 Pre-XDR-TB
4 XDR-TB
151 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 155 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| lineage2.1;lineage4.9 | 20 |
| lineage2.2.1 | 17 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9 | 12 |
| lineage2.1;lineage4.9;lineage6.3 | 9 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage2.1 | 3 |
| La3;lineage2.1;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 6 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| La1.7;lineage4.9;lineage7 | 2 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage2.2.1.1 | 4 |
| lineage2.2.1;lineage4.9 | 1 |
| M.canetti;lineage2.1 | 1 |
| lineage4.1.2.1 | 13 |
| lineage2.2 | 6 |
| 9 | |
| lineage4 | 6 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| M.canetti;lineage2.2 | 3 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| lineage4.9;lineage6.3 | 4 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 25 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.4.1.1.1 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| M.canetti;lineage2.1;lineage4 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La2;lineage2.2 | 1 |
| lineage2.1;lineage4.3.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage2.1;lineage6.3 | 2 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 3 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.2;La1.8.1 | 1 |
| lineage1.1.2;lineage4 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9 | 5 |
| M.canetti;lineage4.3.1;lineage4.9 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage1.1 | 1 |
| La1.2.BCG | 1 |
| lineage4.8;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage3 | 1 |
| lineage4.2;lineage4.9 | 2 |
| lineage3 | 3 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 4 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La1;lineage4.9 | 2 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.9;lineage7 | 3 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.4.1.1 | 2 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 5 |
| M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage3.1;lineage9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| La3;M.canetti;lineage4.9 | 2 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage3.1 | 1 |
| lineage4.7 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage4.1.1.3 | 1 |
| La3;lineage4.3.4 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.3.2.1 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.1 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La1.7.1;lineage4.9 | 1 |
| La3;lineage4.9 | 3 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| lineage4.1.2.1.1 | 1 |
| La3 | 1 |
| lineage4.3.4.1 | 1 |
| La3;M.canetti;lineage3.1 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La1.6;lineage4 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage3.1.2.1;lineage4 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La3;lineage4.8 | 1 |
| lineage4.3.4 | 1 |
| La3;lineage1.1.2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.8 | 1 |
| La1.6;La3;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 452 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR14782405 | HR-TB | lineage4.9 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR3675450 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR5341308 | Sensitive | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | ERR323055 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR5311096 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR8976043 | HR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR26399265 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR323041 | HR-TB | M.canetti;lineage2.1 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR1165584 | Other | lineage4.1.2.1 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR1180996 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR2514692 | Other | None | SRR5341387 | Other | lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | SRR1172857 | Other | None | SRR6325442 | HR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR9787197 | Other | None | ERR234659 | Other | None | SRR1162864 | Other | lineage4.1.2.1 | None | SRR6044815 | Other | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR3675558 | HR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR3675568 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR038268 | HR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | SRR6045952 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR1158918 | Sensitive | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR1165506 | Other | lineage4.1.2.1 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | SRR3675275 | Other | lineage4.9 | None | ERR323063 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR2693242 | RR-TB | lineage2.1;lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR6046514 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2693239 | RR-TB | M.canetti;lineage2.1;lineage4 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR3675506 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR5311083 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR772255 | MDR-TB | lineage2.1;lineage4.3.2 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR323036 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR1196677 | Other | lineage2.2 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR29096420 | Sensitive | lineage4.9 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | ERR181887 | Other | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR2446566 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR323064 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4817692 | HR-TB | lineage1.1.2;lineage4 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR161037 | Other | lineage4.9 | None | ERR9119138 | RR-TB | M.canetti;lineage4.3.1;lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR3283016 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR4769452 | Other | lineage4.9 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR3283017 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR1184294 | Other | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR3675320 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR5311090 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3077978 | RR-TB | lineage1.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR323038 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR386953 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | ERR4814536 | MDR-TB | M.canetti;lineage2.1;lineage3 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR13265833 | Other | lineage4.9 | None | SRR3675554 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4814352 | Other | lineage2.2.1 | None | SRR10808730 | Other | lineage4.9 | None | ERR124652 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR2509673 | Other | lineage2.2.1 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR2446118 | Other | lineage4.1.2.1 | nl | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR3675545 | Other | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR323060 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR7535082 | Sensitive | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR176658 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR137286 | Other | lineage4.9 | None | ERR4188342 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR2693229 | RR-TB | La3;M.canetti;lineage4.9 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR18213713 | HR-TB | None | SRR29096795 | Sensitive | lineage4.9 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR1063896 | Sensitive | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR369158 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR323034 | MDR-TB | La3;M.canetti;lineage2.1;lineage3.1 | None | ERR4819932 | Other | lineage4.7 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR126608 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | SRR1166821 | Other | lineage4.1.2.1 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR323040 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6045526 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR4821655 | HR-TB | lineage4.9 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR1196546 | Other | lineage4.9 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR1181328 | Other | lineage2.2.1 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR3675236 | Other | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR3273109 | HR-TB | lineage4 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR3675561 | Other | M.canetti;lineage2.1;lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR2517489 | Sensitive | lineage4.1.2.1 | nl | ERR5311089 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR702406 | Other | lineage2.1 | None | ERR5311099 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6046594 | Sensitive | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | ERR9117709 | Other | None | ERR4816656 | Other | lineage4.9 | None | SRR3675441 | Other | lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR6044942 | HR-TB | lineage4.9 | None | SRR29096527 | Sensitive | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3283021 | HR-TB | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | SRR5341453 | Other | lineage4.9 | None | SRR1172728 | RR-TB | La3 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR1173767 | MDR-TB | lineage4.4.1.1 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR1873393 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR3675383 | Sensitive | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR473314 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR29096178 | Sensitive | lineage4.9 | None | ERR126600 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR181824 | HR-TB | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR28119827 | Other | La3;lineage4.9 | None | ERR323047 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | SRR28351554 | Sensitive | La1.6;lineage4 | None | SRR6046878 | Other | lineage4.9 | None | SRR3675444 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR5311098 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR6358837 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR6866807 | Other | lineage4.9 | None | ERR3797016 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR28351455 | Other | lineage3.1.2.1;lineage4 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675322 | HR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR4817893 | Other | La3;lineage4.8 | None | SRR6044875 | Sensitive | lineage4.9 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR323058 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR387051 | Other | lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR4821053 | RR-TB | lineage3 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR6045053 | Other | lineage4 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR5311100 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR1163221 | MDR-TB | lineage4.1.2.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR3675446 | RR-TB | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR1873396 | Pre-XDR-TB | M.canetti;lineage2.2 | None | SRR3675486 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR29096879 | Sensitive | lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR5311082 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR278594 | HR-TB | lineage2.1;lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR6785268 | Sensitive | lineage4.2.1 | None | SRR3675515 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | SRR3675464 | HR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6045948 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR7535086 | Other | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4800341 | Other | lineage3 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR176766 | HR-TB | lineage2.1;lineage4.9 | None | ERR3275215 | RR-TB | lineage4.1.2.1 | nl | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None |
|---|
