TB-Profiler result

Run: SRR13583478
Summary

Run ID: SRR13583478

Sample name:

Date: 03-04-2023 09:02:06

Number of reads: 1042058

Percentage reads mapped: 64.41

Strain: lineage4.3.4.1

Drug-resistance: HR-TB

Download CSV Download TXT Download PDF Download JSON
Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage4 Euro-American LAM;T;S;X;H None 0.98
lineage4.3 Euro-American (LAM) mainly-LAM None 0.88
lineage4.3.4 Euro-American (LAM) LAM RD174 0.89
lineage4.3.4.1 Euro-American (LAM) LAM1;LAM2 RD174 0.88
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
rrs 1472307 n.462C>T non_coding_transcript_exon_variant 0.53 streptomycin
katG 2155108 p.Ile335Thr missense_variant 0.19 isoniazid
katG 2155163 p.Ile317Leu missense_variant 0.19 isoniazid
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrB 6184 c.945C>G synonymous_variant 0.5
gyrB 6215 p.Ser326Thr missense_variant 0.64
gyrB 6238 c.999G>A synonymous_variant 0.69
gyrB 6242 p.Arg335Lys missense_variant 0.69
gyrB 6250 c.1011A>G synonymous_variant 0.61
gyrB 6280 c.1041T>C synonymous_variant 0.68
gyrB 6283 c.1044C>T synonymous_variant 0.67
gyrB 6286 c.1047T>C synonymous_variant 0.67
gyrB 6292 c.1053G>T synonymous_variant 0.67
gyrB 6298 c.1059C>G synonymous_variant 0.65
gyrA 6307 c.-995T>G upstream_gene_variant 0.58
gyrA 6319 c.-983G>C upstream_gene_variant 0.59
gyrA 6361 c.-941G>A upstream_gene_variant 0.46
gyrA 6376 c.-926G>A upstream_gene_variant 0.42
gyrA 6379 c.-923C>G upstream_gene_variant 0.43
gyrA 6382 c.-920A>G upstream_gene_variant 0.42
gyrA 6388 c.-914T>C upstream_gene_variant 0.36
gyrA 6403 c.-899T>C upstream_gene_variant 0.44
gyrA 6412 c.-890G>A upstream_gene_variant 0.38
gyrA 6415 c.-887G>C upstream_gene_variant 0.35
gyrA 6418 c.-884C>G upstream_gene_variant 0.29
gyrA 6427 c.-875T>C upstream_gene_variant 0.28
gyrA 6439 c.-863C>A upstream_gene_variant 0.19
gyrB 6440 p.Thr401Ala missense_variant 0.19
gyrA 6448 c.-854G>C upstream_gene_variant 0.22
gyrA 6454 c.-848C>G upstream_gene_variant 0.21
gyrA 6457 c.-845T>G upstream_gene_variant 0.21
gyrA 6460 c.-842G>C upstream_gene_variant 0.22
gyrA 6469 c.-833T>G upstream_gene_variant 0.24
gyrA 6475 c.-827C>G upstream_gene_variant 0.23
gyrA 6478 c.-824G>C upstream_gene_variant 0.23
gyrA 6484 c.-818A>G upstream_gene_variant 0.24
gyrA 6691 c.-611G>A upstream_gene_variant 0.19
gyrA 6700 c.-602T>C upstream_gene_variant 0.21
gyrA 6703 c.-599G>C upstream_gene_variant 0.23
gyrA 6709 c.-593A>G upstream_gene_variant 0.27
gyrA 6712 c.-590G>C upstream_gene_variant 0.27
gyrA 6728 c.-574_-572delCTAinsTTG upstream_gene_variant 0.25
gyrA 6745 c.-557T>C upstream_gene_variant 0.26
gyrA 6751 c.-551G>C upstream_gene_variant 0.29
gyrA 6760 c.-542G>C upstream_gene_variant 0.29
gyrA 6775 c.-527G>C upstream_gene_variant 0.31
gyrB 6794 p.Ile519Leu missense_variant 0.29
gyrB 6797 p.Gly520Thr missense_variant 0.29
gyrA 6811 c.-491C>T upstream_gene_variant 0.3
gyrA 6841 c.-461T>C upstream_gene_variant 0.3
gyrA 6856 c.-446T>C upstream_gene_variant 0.29
gyrA 6859 c.-443T>C upstream_gene_variant 0.28
gyrA 6862 c.-440C>G upstream_gene_variant 0.28
gyrA 6878 c.-424T>C upstream_gene_variant 0.29
gyrA 6881 c.-421T>C upstream_gene_variant 0.29
gyrA 6889 c.-413G>T upstream_gene_variant 0.26
gyrA 6904 c.-398C>G upstream_gene_variant 0.22
gyrA 6913 c.-389C>T upstream_gene_variant 0.29
gyrA 6919 c.-383T>C upstream_gene_variant 0.28
gyrA 6934 c.-368A>G upstream_gene_variant 0.31
gyrA 6949 c.-353A>G upstream_gene_variant 0.27
gyrA 6950 c.-352_-350delCTCinsTTG upstream_gene_variant 0.29
gyrA 6973 c.-329G>C upstream_gene_variant 0.29
gyrA 6982 c.-320A>C upstream_gene_variant 0.31
gyrA 6988 c.-314C>A upstream_gene_variant 0.3
gyrA 7000 c.-302C>A upstream_gene_variant 0.32
gyrA 7006 c.-296T>C upstream_gene_variant 0.27
gyrA 7007 c.-295C>T upstream_gene_variant 0.27
gyrA 7018 c.-284G>C upstream_gene_variant 0.27
gyrA 7021 c.-281G>C upstream_gene_variant 0.27
gyrB 7023 p.Leu595Gln missense_variant 0.27
gyrA 7030 c.-272C>G upstream_gene_variant 0.28
gyrA 7033 c.-269G>C upstream_gene_variant 0.28
gyrB 7051 p.Glu604Asp missense_variant 0.25
gyrA 7057 c.-245C>T upstream_gene_variant 0.22
gyrA 7066 c.-236G>C upstream_gene_variant 0.22
gyrA 7099 c.-203G>A upstream_gene_variant 0.17
gyrA 7108 c.-194G>A upstream_gene_variant 0.16
gyrA 7362 p.Glu21Gln missense_variant 1.0
gyrA 7585 p.Ser95Thr missense_variant 1.0
gyrA 7763 c.462T>C synonymous_variant 0.23
gyrA 7769 c.468C>T synonymous_variant 0.23
gyrA 7799 c.498A>G synonymous_variant 0.17
gyrA 7814 c.513C>G synonymous_variant 0.2
gyrA 8090 c.789C>G synonymous_variant 0.18
gyrA 8093 c.792C>T synonymous_variant 0.2
gyrA 8096 c.795T>A synonymous_variant 0.2
gyrA 8099 c.798T>C synonymous_variant 0.2
gyrA 8111 c.810G>C synonymous_variant 0.27
gyrA 8121 c.820T>C synonymous_variant 0.27
gyrA 8129 c.828T>C synonymous_variant 0.25
gyrA 8135 c.834C>G synonymous_variant 0.25
gyrA 8156 c.855T>C synonymous_variant 0.24
gyrA 8168 c.867A>G synonymous_variant 0.22
gyrA 8177 c.876A>C synonymous_variant 0.23
gyrA 8189 c.888G>C synonymous_variant 0.25
gyrA 8198 c.897T>C synonymous_variant 0.24
gyrA 8207 c.906T>C synonymous_variant 0.24
gyrA 8219 c.918T>C synonymous_variant 0.18
gyrA 8225 c.924T>C synonymous_variant 0.21
gyrA 8247 p.Ile316Val missense_variant 0.18
gyrA 8264 c.963T>C synonymous_variant 0.21
gyrA 8267 c.966G>C synonymous_variant 0.21
gyrA 8273 c.972C>G synonymous_variant 0.2
gyrA 8283 p.Ile328Leu missense_variant 0.23
gyrA 8288 c.987T>C synonymous_variant 0.22
gyrA 8294 c.993T>C synonymous_variant 0.22
gyrA 8324 c.1023T>C synonymous_variant 0.23
gyrA 8330 c.1029C>G synonymous_variant 0.23
gyrA 8337 c.1036_1038delCTAinsTTG synonymous_variant 0.22
gyrA 8340 p.Ala347Ser missense_variant 0.2
gyrA 8366 c.1065G>C synonymous_variant 0.22
gyrA 8367 c.1066C>T synonymous_variant 0.22
gyrA 8382 p.Leu361Met missense_variant 0.23
gyrA 8401 p.Asp367Ala missense_variant 0.23
gyrA 8423 c.1122G>C synonymous_variant 0.19
gyrA 8429 c.1128C>G synonymous_variant 0.2
gyrA 8453 c.1152A>C synonymous_variant 0.26
gyrA 8462 c.1161A>C synonymous_variant 0.19
gyrA 8472 c.1171C>T synonymous_variant 0.2
gyrA 8483 c.1182G>A synonymous_variant 0.19
gyrA 8507 c.1206C>T synonymous_variant 0.28
gyrA 8516 c.1215T>C synonymous_variant 0.29
gyrA 8519 c.1218A>C synonymous_variant 0.32
gyrA 8520 c.1219C>T synonymous_variant 0.28
gyrA 8528 c.1227G>T synonymous_variant 0.27
gyrA 8543 c.1242C>G synonymous_variant 0.31
gyrA 8546 c.1245T>C synonymous_variant 0.31
gyrA 8561 c.1260A>G synonymous_variant 0.32
gyrA 8576 c.1275C>G synonymous_variant 0.32
gyrA 8579 c.1278C>T synonymous_variant 0.31
gyrA 8603 c.1302A>G synonymous_variant 0.29
gyrA 8619 c.1318T>C synonymous_variant 0.25
gyrA 8624 c.1323G>C synonymous_variant 0.26
gyrA 8636 c.1335A>C synonymous_variant 0.26
gyrA 8642 c.1341A>G synonymous_variant 0.28
gyrA 8655 p.Ile452Val missense_variant 0.26
gyrA 8672 c.1371A>G synonymous_variant 0.29
gyrA 8684 c.1383G>A synonymous_variant 0.28
gyrA 8696 c.1395G>C synonymous_variant 0.3
gyrA 8699 c.1398A>G synonymous_variant 0.3
gyrA 8711 c.1410A>C synonymous_variant 0.32
gyrA 8714 c.1413A>G synonymous_variant 0.34
gyrA 8729 c.1428T>C synonymous_variant 0.31
gyrA 8730 p.Gly477Arg missense_variant 0.32
gyrA 8740 p.Arg480His missense_variant 0.33
gyrA 8747 c.1446A>G synonymous_variant 0.33
gyrA 8750 c.1449C>G synonymous_variant 0.34
gyrA 8751 p.Ala484Ser missense_variant 0.35
gyrA 8756 c.1455A>G synonymous_variant 0.34
gyrA 8762 c.1461G>C synonymous_variant 0.35
gyrA 8767 p.Arg489Lys missense_variant 0.37
gyrA 8780 c.1479C>T synonymous_variant 0.34
gyrA 8786 c.1485T>C synonymous_variant 0.34
gyrA 8810 c.1509A>C synonymous_variant 0.29
gyrA 8818 p.Ser506Asn missense_variant 0.35
gyrA 8828 c.1527T>C synonymous_variant 0.34
gyrA 8837 c.1536C>G synonymous_variant 0.35
gyrA 8852 c.1551T>C synonymous_variant 0.33
gyrA 8858 c.1557T>C synonymous_variant 0.32
gyrA 8867 c.1566A>G synonymous_variant 0.19
gyrA 8870 c.1569G>C synonymous_variant 0.19
gyrA 8873 c.1572A>C synonymous_variant 0.2
gyrA 8891 c.1590G>A synonymous_variant 0.25
gyrA 8894 c.1593C>G synonymous_variant 0.25
gyrA 8897 c.1596T>C synonymous_variant 0.25
gyrA 8903 c.1602T>C synonymous_variant 0.21
gyrA 8933 c.1632G>C synonymous_variant 0.25
gyrA 8939 c.1638T>C synonymous_variant 0.24
gyrA 8942 c.1641G>C synonymous_variant 0.23
gyrA 8946 c.1645_1647delTTGinsCTC synonymous_variant 0.23
gyrA 8987 c.1686C>G synonymous_variant 0.19
gyrA 8990 c.1689C>G synonymous_variant 0.19
gyrA 8998 p.Leu566Trp missense_variant 0.19
gyrA 9017 c.1716C>G synonymous_variant 0.21
gyrA 9020 c.1719G>A synonymous_variant 0.21
gyrA 9023 c.1722A>G synonymous_variant 0.2
gyrA 9029 c.1728T>G synonymous_variant 0.19
gyrA 9032 c.1731T>C synonymous_variant 0.19
gyrA 9035 c.1734G>C synonymous_variant 0.2
gyrA 9038 c.1737C>G synonymous_variant 0.19
gyrA 9050 p.Asp583Glu missense_variant 0.2
gyrA 9051 c.1750T>C synonymous_variant 0.19
gyrA 9080 c.1779G>T synonymous_variant 0.18
gyrA 9099 c.1798_1800delTTAinsCTG synonymous_variant 0.24
gyrA 9119 c.1818A>G synonymous_variant 0.18
gyrA 9122 c.1821C>G synonymous_variant 0.19
gyrA 9131 c.1830G>A synonymous_variant 0.18
gyrA 9167 c.1866C>T synonymous_variant 0.19
gyrA 9182 c.1881T>C synonymous_variant 0.22
gyrA 9191 c.1890G>C synonymous_variant 0.25
gyrA 9197 c.1896G>C synonymous_variant 0.25
gyrA 9200 c.1899A>G synonymous_variant 0.24
gyrA 9230 c.1929T>C synonymous_variant 0.32
gyrA 9242 c.1941A>C synonymous_variant 0.27
gyrA 9299 c.1998G>T synonymous_variant 0.19
gyrA 9304 p.Gly668Asp missense_variant 1.0
gyrA 9335 c.2034G>A synonymous_variant 0.19
gyrA 9345 c.2044A>C synonymous_variant 0.19
gyrA 9368 c.2067G>A synonymous_variant 0.19
gyrA 9419 c.2118T>C synonymous_variant 0.19
gyrA 9421 p.Ile707Thr missense_variant 0.18
gyrA 9443 c.2142G>C synonymous_variant 0.18
gyrA 9452 c.2151G>T synonymous_variant 0.17
gyrA 9467 c.2166T>C synonymous_variant 0.17
fgd1 490896 c.114C>T synonymous_variant 0.2
fgd1 490905 c.123T>C synonymous_variant 0.2
fgd1 490911 c.129T>G synonymous_variant 0.2
fgd1 490998 c.216T>C synonymous_variant 0.19
fgd1 491007 c.225G>C synonymous_variant 0.2
fgd1 491013 c.231C>G synonymous_variant 0.25
fgd1 491106 c.324T>C synonymous_variant 0.26
fgd1 491121 c.339A>G synonymous_variant 0.32
fgd1 491130 c.348C>G synonymous_variant 0.25
fgd1 491144 p.Ala121Asp missense_variant 0.22
fgd1 491151 c.369G>C synonymous_variant 0.21
fgd1 491163 c.381G>A synonymous_variant 0.21
fgd1 491166 c.384G>C synonymous_variant 0.21
fgd1 491181 c.399T>C synonymous_variant 0.24
fgd1 491184 c.402A>G synonymous_variant 0.24
fgd1 491193 c.411G>A synonymous_variant 0.24
fgd1 491194 c.412_414delCTAinsTTG synonymous_variant 0.24
fgd1 491202 c.420G>C synonymous_variant 0.19
fgd1 491203 p.Gln141Glu missense_variant 0.24
fgd1 491212 p.Ser144Arg missense_variant 0.25
fgd1 491232 c.450T>C synonymous_variant 0.35
fgd1 491241 p.Asp153Glu missense_variant 0.35
fgd1 491283 p.Asp167Glu missense_variant 0.35
fgd1 491286 c.504G>T synonymous_variant 0.35
fgd1 491289 c.507C>G synonymous_variant 0.35
fgd1 491292 c.510G>C synonymous_variant 0.33
fgd1 491295 c.513C>G synonymous_variant 0.33
fgd1 491296 p.Val172Ile missense_variant 0.35
fgd1 491302 p.Ile174Val missense_variant 0.35
fgd1 491307 c.525C>G synonymous_variant 0.32
fgd1 491313 c.531C>G synonymous_variant 0.36
fgd1 491340 c.558C>G synonymous_variant 0.37
fgd1 491349 c.567T>C synonymous_variant 0.34
fgd1 491364 c.582T>C synonymous_variant 0.3
fgd1 491367 c.585G>C synonymous_variant 0.3
fgd1 491370 c.588C>G synonymous_variant 0.31
fgd1 491388 c.606C>G synonymous_variant 0.23
fgd1 491393 p.Thr204Lys missense_variant 0.2
fgd1 491397 p.Glu205Asp missense_variant 0.21
fgd1 491453 p.Gly224Asp missense_variant 0.16
fgd1 491472 c.690A>G synonymous_variant 0.3
fgd1 491487 c.705C>T synonymous_variant 0.32
fgd1 491496 c.714C>T synonymous_variant 0.32
fgd1 491499 c.717G>C synonymous_variant 0.31
fgd1 491500 p.Glu240Lys missense_variant 0.31
fgd1 491508 c.726A>G synonymous_variant 0.33
fgd1 491509 c.727T>C synonymous_variant 0.33
fgd1 491512 p.Asn244Glu missense_variant 0.33
fgd1 491526 c.744T>C synonymous_variant 0.37
fgd1 491535 c.753G>C synonymous_variant 0.36
fgd1 491541 c.759G>A synonymous_variant 0.33
fgd1 491542 c.760T>C synonymous_variant 0.32
fgd1 491547 c.765A>C synonymous_variant 0.31
fgd1 491550 c.768T>C synonymous_variant 0.31
fgd1 491583 c.801G>A synonymous_variant 0.35
fgd1 491601 c.819T>C synonymous_variant 0.32
fgd1 491610 c.828A>G synonymous_variant 0.23
mshA 575593 c.246G>C synonymous_variant 0.21
mshA 575617 c.270C>G synonymous_variant 0.28
mshA 575623 c.276C>G synonymous_variant 0.26
mshA 575629 c.282A>G synonymous_variant 0.28
mshA 575632 c.285G>C synonymous_variant 0.3
mshA 575635 c.288A>G synonymous_variant 0.3
mshA 575638 c.291T>C synonymous_variant 0.3
mshA 575647 c.300G>C synonymous_variant 0.3
mshA 575649 p.Val101Ala missense_variant 0.3
mshA 575659 c.312A>G synonymous_variant 0.25
mshA 575662 c.315C>G synonymous_variant 0.24
mshA 575674 c.327G>C synonymous_variant 0.2
mshA 575692 c.345G>C synonymous_variant 0.19
mshA 575695 c.348C>G synonymous_variant 0.19
mshA 575701 c.354G>A synonymous_variant 0.19
mshA 575704 c.357T>C synonymous_variant 0.2
mshA 575713 c.366G>A synonymous_variant 0.18
mshA 575779 c.432A>G synonymous_variant 0.2
mshA 575803 c.456C>T synonymous_variant 0.19
mshA 575812 c.465C>T synonymous_variant 0.18
mshA 575830 c.483C>G synonymous_variant 0.19
mshA 575864 c.517T>C synonymous_variant 0.22
mshA 575878 c.531A>G synonymous_variant 0.21
mshA 575884 c.537G>C synonymous_variant 0.23
mshA 575893 c.546C>G synonymous_variant 0.22
mshA 575896 c.549G>C synonymous_variant 0.24
mshA 575908 c.561A>G synonymous_variant 0.24
mshA 575920 c.573C>G synonymous_variant 0.2
mshA 575924 p.Gly193Ser missense_variant 0.2
mshA 575944 c.597T>C synonymous_variant 0.21
mshA 575950 c.603C>G synonymous_variant 0.21
mshA 576108 p.Ala254Gly missense_variant 0.26
ccsA 620659 p.Arg257Ser missense_variant 0.18
ccsA 620664 c.774C>T synonymous_variant 0.19
ccsA 620682 c.792G>A synonymous_variant 0.24
ccsA 620688 c.798G>C synonymous_variant 0.23
ccsA 620710 p.Val274Ile missense_variant 0.22
ccsA 620718 c.828G>C synonymous_variant 0.22
ccsA 620721 c.831G>C synonymous_variant 0.21
ccsA 620733 c.843G>C synonymous_variant 0.2
ccsA 620734 c.844C>A synonymous_variant 0.2
ccsA 620739 c.849A>G synonymous_variant 0.2
ccsA 620748 c.858T>A synonymous_variant 0.2
ccsA 620778 c.888T>C synonymous_variant 0.21
ccsA 620784 c.894C>G synonymous_variant 0.22
ccsA 620790 c.900C>T synonymous_variant 0.2
ccsA 620796 c.906C>G synonymous_variant 0.19
rpoB 760060 p.Tyr85Leu missense_variant 0.19
rpoB 760067 c.261G>T synonymous_variant 0.19
rpoB 760070 c.264T>G synonymous_variant 0.19
rpoB 760091 c.285G>A synonymous_variant 0.26
rpoB 760101 c.295T>C synonymous_variant 0.31
rpoB 760112 c.306T>C synonymous_variant 0.3
rpoB 760118 c.312T>G synonymous_variant 0.36
rpoB 760121 c.315T>C synonymous_variant 0.33
rpoB 760130 p.Asp108Glu missense_variant 0.41
rpoB 760139 c.333A>G synonymous_variant 0.41
rpoB 760142 c.336C>G synonymous_variant 0.44
rpoB 760145 c.339C>G synonymous_variant 0.44
rpoB 760181 c.375T>G synonymous_variant 0.49
rpoB 760184 c.378A>G synonymous_variant 0.49
rpoB 760196 c.390C>G synonymous_variant 0.5
rpoB 760235 c.429T>C synonymous_variant 0.44
rpoB 760283 c.477G>C synonymous_variant 0.41
rpoB 760298 c.492G>C synonymous_variant 0.45
rpoB 760307 c.501T>C synonymous_variant 0.41
rpoB 760328 c.522G>C synonymous_variant 0.42
rpoB 760331 c.525G>C synonymous_variant 0.41
rpoB 760340 c.534G>T synonymous_variant 0.47
rpoB 760358 c.552C>G synonymous_variant 0.49
rpoB 760361 c.555T>C synonymous_variant 0.49
rpoB 760370 c.564C>G synonymous_variant 0.47
rpoB 760376 p.Asp190Glu missense_variant 0.44
rpoB 760380 p.Thr192Leu missense_variant 0.44
rpoB 760406 c.600G>C synonymous_variant 0.41
rpoB 760412 c.606C>G synonymous_variant 0.41
rpoB 760424 c.618C>G synonymous_variant 0.39
rpoB 760430 c.624T>C synonymous_variant 0.41
rpoB 760442 c.636G>A synonymous_variant 0.43
rpoB 760475 c.669A>G synonymous_variant 0.45
rpoB 760481 c.675G>C synonymous_variant 0.43
rpoB 760484 c.678A>G synonymous_variant 0.43
rpoB 760511 c.705G>C synonymous_variant 0.31
rpoB 760522 p.Ser239Asn missense_variant 0.3
rpoB 760532 c.726T>C synonymous_variant 0.3
rpoB 760533 p.Val243Thr missense_variant 0.3
rpoB 760547 c.741G>T synonymous_variant 0.34
rpoB 760563 p.Arg253Met missense_variant 0.34
rpoB 760591 p.Val262Ala missense_variant 0.28
rpoB 760611 c.805T>C synonymous_variant 0.34
rpoB 760646 c.840C>G synonymous_variant 0.32
rpoB 760649 c.843G>C synonymous_variant 0.34
rpoB 760655 c.849A>G synonymous_variant 0.38
rpoB 760661 c.855A>C synonymous_variant 0.33
rpoB 760670 c.864G>C synonymous_variant 0.31
rpoB 760674 c.868T>C synonymous_variant 0.32
rpoB 760679 c.873A>G synonymous_variant 0.32
rpoB 760683 c.877T>C synonymous_variant 0.31
rpoB 760724 c.918T>C synonymous_variant 0.3
rpoB 760730 c.924T>C synonymous_variant 0.29
rpoB 760755 p.His317Asn missense_variant 0.19
rpoB 760793 c.987A>G synonymous_variant 0.2
rpoB 760820 c.1014T>C synonymous_variant 0.19
rpoB 760826 c.1020C>G synonymous_variant 0.19
rpoB 760830 c.1024T>C synonymous_variant 0.2
rpoB 760877 c.1071G>C synonymous_variant 0.18
rpoB 760928 c.1122G>C synonymous_variant 0.29
rpoB 760931 c.1125C>G synonymous_variant 0.25
rpoB 760934 c.1128C>T synonymous_variant 0.25
rpoB 760946 c.1140A>G synonymous_variant 0.32
rpoB 760982 c.1176G>C synonymous_variant 0.38
rpoB 760985 c.1179G>C synonymous_variant 0.38
rpoB 760991 c.1185G>C synonymous_variant 0.41
rpoB 761006 c.1200C>T synonymous_variant 0.46
rpoB 761015 c.1209G>C synonymous_variant 0.45
rpoB 761027 c.1221A>G synonymous_variant 0.41
rpoB 761036 c.1230G>C synonymous_variant 0.43
rpoB 761037 c.1231T>C synonymous_variant 0.47
rpoB 761057 c.1251G>C synonymous_variant 0.41
rpoB 761102 c.1296A>G synonymous_variant 0.46
rpoB 761129 c.1323G>C synonymous_variant 0.38
rpoB 761133 c.1327T>C synonymous_variant 0.38
rpoB 761150 c.1344A>C synonymous_variant 0.41
rpoB 761165 c.1359G>C synonymous_variant 0.38
rpoB 761180 c.1374A>C synonymous_variant 0.39
rpoB 761189 c.1383T>C synonymous_variant 0.38
rpoB 761195 c.1389G>C synonymous_variant 0.39
rpoB 761207 c.1401C>T synonymous_variant 0.43
rpoB 761213 c.1407G>C synonymous_variant 0.42
rpoB 761234 c.1428G>C synonymous_variant 0.41
rpoB 761249 c.1443A>G synonymous_variant 0.38
rpoB 761255 c.1449T>G synonymous_variant 0.37
rpoB 761258 c.1452G>A synonymous_variant 0.33
rpoB 761261 c.1455G>C synonymous_variant 0.33
rpoB 761286 c.1480C>T synonymous_variant 0.29
rpoB 761289 p.Ser495Ala missense_variant 0.26
rpoB 761292 p.Val496Thr missense_variant 0.25
rpoB 761300 c.1494G>C synonymous_variant 0.25
rpoB 761510 c.1704T>C synonymous_variant 0.23
rpoB 761531 c.1725C>G synonymous_variant 0.3
rpoB 761537 c.1731C>G synonymous_variant 0.36
rpoB 761570 c.1764T>C synonymous_variant 0.36
rpoB 761573 c.1767C>G synonymous_variant 0.36
rpoB 761579 c.1773G>C synonymous_variant 0.35
rpoB 761606 c.1800C>G synonymous_variant 0.33
rpoB 761612 c.1806G>T synonymous_variant 0.33
rpoB 761615 c.1809A>C synonymous_variant 0.33
rpoB 761636 c.1830G>T synonymous_variant 0.34
rpoB 761645 c.1839C>G synonymous_variant 0.29
rpoB 761648 c.1842T>C synonymous_variant 0.28
rpoB 761657 c.1851C>G synonymous_variant 0.3
rpoB 761672 c.1866C>G synonymous_variant 0.3
rpoB 761675 c.1869G>C synonymous_variant 0.27
rpoB 761690 c.1884G>C synonymous_variant 0.24
rpoB 761727 p.Ser641Gly missense_variant 0.24
rpoB 761735 c.1929C>G synonymous_variant 0.25
rpoB 761747 c.1941G>C synonymous_variant 0.3
rpoB 761750 c.1944G>C synonymous_variant 0.29
rpoB 761765 c.1959T>C synonymous_variant 0.33
rpoB 761772 p.His656Ala missense_variant 0.3
rpoB 761778 p.Asn658Asp missense_variant 0.31
rpoB 761789 c.1983G>C synonymous_variant 0.27
rpoB 761791 p.Arg662His missense_variant 0.26
rpoB 761813 c.2007T>C synonymous_variant 0.23
rpoB 761815 p.Ala670Glu missense_variant 0.21
rpoB 761834 c.2028T>C synonymous_variant 0.23
rpoB 761858 c.2052G>C synonymous_variant 0.2
rpoB 761873 c.2067A>C synonymous_variant 0.23
rpoB 761885 c.2079T>C synonymous_variant 0.28
rpoB 761906 c.2100C>G synonymous_variant 0.26
rpoB 761909 c.2103T>C synonymous_variant 0.26
rpoB 761912 c.2106T>C synonymous_variant 0.25
rpoB 761915 p.Asp703Glu missense_variant 0.25
rpoB 761916 p.Asp704Asn missense_variant 0.25
rpoB 761948 c.2142G>C synonymous_variant 0.3
rpoB 761954 c.2148C>G synonymous_variant 0.34
rpoB 761999 c.2193G>C synonymous_variant 0.42
rpoB 762008 c.2202C>T synonymous_variant 0.4
rpoB 762014 c.2208C>T synonymous_variant 0.38
rpoB 762017 c.2211A>G synonymous_variant 0.37
rpoB 762053 c.2247T>C synonymous_variant 0.35
rpoB 762062 c.2256T>C synonymous_variant 0.35
rpoB 762065 c.2259T>C synonymous_variant 0.35
rpoB 762083 c.2277T>C synonymous_variant 0.35
rpoB 762086 c.2280G>C synonymous_variant 0.34
rpoB 762101 c.2295C>G synonymous_variant 0.35
rpoB 762114 p.Ile770Val missense_variant 0.37
rpoB 762131 c.2325C>G synonymous_variant 0.39
rpoB 762140 c.2334G>C synonymous_variant 0.35
rpoB 762143 c.2337T>C synonymous_variant 0.37
rpoB 762149 c.2343G>C synonymous_variant 0.37
rpoB 762167 c.2361T>C synonymous_variant 0.37
rpoB 762176 c.2370T>C synonymous_variant 0.36
rpoB 762185 c.2379G>C synonymous_variant 0.34
rpoB 762206 c.2400C>G synonymous_variant 0.37
rpoB 762212 c.2406G>C synonymous_variant 0.37
rpoB 762233 c.2427G>C synonymous_variant 0.4
rpoB 762254 c.2448T>G synonymous_variant 0.38
rpoB 762257 c.2451C>G synonymous_variant 0.38
rpoB 762260 c.2454C>T synonymous_variant 0.38
rpoB 762284 c.2478G>C synonymous_variant 0.38
rpoB 762293 c.2487T>C synonymous_variant 0.39
rpoB 762317 c.2511A>G synonymous_variant 0.4
rpoB 762323 c.2517C>G synonymous_variant 0.39
rpoB 762329 c.2523G>C synonymous_variant 0.4
rpoB 762338 c.2532T>C synonymous_variant 0.41
rpoB 762347 c.2541T>C synonymous_variant 0.4
rpoB 762362 p.Glu852Asp missense_variant 0.4
rpoB 762369 c.2563T>C synonymous_variant 0.39
rpoC 762380 c.-990T>C upstream_gene_variant 0.33
rpoC 762398 c.-972T>C upstream_gene_variant 0.36
rpoC 762401 c.-969G>C upstream_gene_variant 0.36
rpoC 762404 c.-966T>C upstream_gene_variant 0.36
rpoC 762410 c.-960T>C upstream_gene_variant 0.39
rpoC 762416 c.-954A>G upstream_gene_variant 0.38
rpoC 762419 c.-951C>G upstream_gene_variant 0.37
rpoC 762434 c.-936T>C upstream_gene_variant 0.34
rpoC 762449 c.-921C>A upstream_gene_variant 0.32
rpoC 762467 c.-903C>T upstream_gene_variant 0.31
rpoC 762488 c.-882G>C upstream_gene_variant 0.28
rpoB 762489 p.Val895Gln missense_variant 0.28
rpoC 762509 c.-861T>G upstream_gene_variant 0.24
rpoB 762510 p.Ala902Pro missense_variant 0.27
rpoC 762521 c.-849C>G upstream_gene_variant 0.26
rpoC 762533 c.-837T>C upstream_gene_variant 0.24
rpoC 762536 c.-834T>C upstream_gene_variant 0.25
rpoC 762537 c.-833T>C upstream_gene_variant 0.25
rpoC 762551 c.-819C>G upstream_gene_variant 0.24
rpoC 762554 c.-816G>A upstream_gene_variant 0.24
rpoC 762794 c.-576C>G upstream_gene_variant 0.18
rpoC 762818 c.-552C>G upstream_gene_variant 0.19
rpoC 762857 c.-513C>G upstream_gene_variant 0.2
rpoC 762860 c.-510G>C upstream_gene_variant 0.21
rpoC 762863 c.-507T>C upstream_gene_variant 0.24
rpoC 762929 c.-441G>T upstream_gene_variant 0.28
rpoC 762962 c.-408C>T upstream_gene_variant 0.34
rpoC 762971 c.-399G>A upstream_gene_variant 0.35
rpoC 762989 c.-381G>C upstream_gene_variant 0.35
rpoC 762995 c.-375G>T upstream_gene_variant 0.36
rpoC 763028 c.-342T>C upstream_gene_variant 0.35
rpoC 763031 c.-339T>G upstream_gene_variant 0.37
rpoC 763040 c.-330C>G upstream_gene_variant 0.42
rpoC 763070 c.-300T>C upstream_gene_variant 0.49
rpoC 763085 c.-285C>G upstream_gene_variant 0.38
rpoC 763115 c.-255T>C upstream_gene_variant 0.39
rpoC 763136 c.-234C>T upstream_gene_variant 0.39
rpoC 763148 c.-222G>C upstream_gene_variant 0.43
rpoC 763158 c.-212C>T upstream_gene_variant 0.44
rpoC 763166 c.-204A>G upstream_gene_variant 0.4
rpoC 763202 c.-168A>G upstream_gene_variant 0.23
rpoC 763205 c.-165G>C upstream_gene_variant 0.21
rpoC 763206 c.-164_-162delAGTinsTCG upstream_gene_variant 0.21
rpoC 763214 c.-156T>C upstream_gene_variant 0.21
rpoC 763226 c.-144A>G upstream_gene_variant 0.19
rpoC 763227 c.-143C>T upstream_gene_variant 0.19
rpoC 763402 c.33C>A synonymous_variant 0.31
rpoC 763411 c.42T>G synonymous_variant 0.31
rpoC 763414 c.45T>C synonymous_variant 0.32
rpoC 763441 c.72C>T synonymous_variant 0.35
rpoC 763444 c.75T>C synonymous_variant 0.36
rpoC 763456 c.87A>G synonymous_variant 0.4
rpoC 763486 c.117T>G synonymous_variant 0.39
rpoC 763528 c.159G>A synonymous_variant 0.37
rpoC 763546 c.177A>G synonymous_variant 0.39
rpoC 763570 c.201G>C synonymous_variant 0.45
rpoC 763573 c.204G>C synonymous_variant 0.43
rpoC 763594 c.225C>T synonymous_variant 0.42
rpoC 763603 c.234C>T synonymous_variant 0.47
rpoC 763660 c.291T>G synonymous_variant 0.41
rpoC 763675 c.306C>G synonymous_variant 0.45
rpoC 763696 c.327T>C synonymous_variant 0.4
rpoC 763702 c.333C>G synonymous_variant 0.38
rpoC 763717 c.348T>C synonymous_variant 0.37
rpoC 763723 c.354G>C synonymous_variant 0.37
rpoC 763732 c.363C>G synonymous_variant 0.38
rpoC 763741 c.372C>T synonymous_variant 0.38
rpoC 763744 c.375G>C synonymous_variant 0.38
rpoC 763765 c.396T>C synonymous_variant 0.4
rpoC 763774 c.405G>C synonymous_variant 0.42
rpoC 763792 p.Glu141Asp missense_variant 0.35
rpoC 763807 c.438T>C synonymous_variant 0.38
rpoC 763816 c.447C>G synonymous_variant 0.42
rpoC 763835 p.Ala156Met missense_variant 0.33
rpoC 763853 p.Val162Ile missense_variant 0.35
rpoC 763858 c.489A>G synonymous_variant 0.36
rpoC 763872 p.Gly168Ala missense_variant 0.3
rpoC 763876 p.Glu169Asp missense_variant 0.29
rpoC 763879 c.510A>G synonymous_variant 0.26
rpoC 763888 c.519G>C synonymous_variant 0.3
rpoC 763891 c.522G>C synonymous_variant 0.29
rpoC 763894 c.525A>G synonymous_variant 0.29
rpoC 763900 c.531G>C synonymous_variant 0.3
rpoC 763945 c.576T>C synonymous_variant 0.41
rpoC 763951 c.582G>C synonymous_variant 0.44
rpoC 763972 c.603C>T synonymous_variant 0.36
rpoC 763987 c.618C>T synonymous_variant 0.4
rpoC 763991 p.Ile208Leu missense_variant 0.41
rpoC 763996 c.627T>C synonymous_variant 0.41
rpoC 764002 c.633C>G synonymous_variant 0.41
rpoC 764005 c.636G>C synonymous_variant 0.42
rpoC 764024 c.655_657delTTGinsCTC synonymous_variant 0.46
rpoC 764032 p.Asp221Glu missense_variant 0.46
rpoC 764040 p.Ser224Thr missense_variant 0.43
rpoC 764044 c.675T>C synonymous_variant 0.41
rpoC 764059 c.690G>C synonymous_variant 0.47
rpoC 764083 c.714A>G synonymous_variant 0.42
rpoC 764098 c.729A>G synonymous_variant 0.4
rpoC 764101 c.732C>G synonymous_variant 0.34
rpoC 764102 p.Val245Ile missense_variant 0.38
rpoC 764112 p.Tyr248Phe missense_variant 0.41
rpoC 764116 c.747C>T synonymous_variant 0.39
rpoC 764119 c.750G>A synonymous_variant 0.4
rpoC 764131 c.762T>C synonymous_variant 0.36
rpoC 764140 c.771C>T synonymous_variant 0.37
rpoC 764188 c.819A>G synonymous_variant 0.3
rpoC 764195 p.Ser276Ile missense_variant 0.28
rpoC 764203 c.834G>C synonymous_variant 0.23
rpoC 764206 c.837T>C synonymous_variant 0.22
rpoC 764215 c.846A>G synonymous_variant 0.24
rpoC 764257 c.888G>C synonymous_variant 0.23
rpoC 764266 c.897T>C synonymous_variant 0.26
rpoC 764269 c.900G>C synonymous_variant 0.22
rpoC 764272 c.903G>C synonymous_variant 0.23
rpoC 764278 c.909A>G synonymous_variant 0.3
rpoC 764290 c.921C>T synonymous_variant 0.26
rpoC 764293 c.924G>C synonymous_variant 0.27
rpoC 764353 c.984G>T synonymous_variant 0.39
rpoC 764359 c.990C>G synonymous_variant 0.39
rpoC 764365 c.996C>T synonymous_variant 0.38
rpoC 764380 c.1011G>C synonymous_variant 0.3
rpoC 764381 c.1012_1013delTCinsAG synonymous_variant 0.3
rpoC 764387 c.1018T>C synonymous_variant 0.3
rpoC 764405 c.1036_1038delAGGinsCGC synonymous_variant 0.31
rpoC 764419 c.1050C>G synonymous_variant 0.32
rpoC 764428 c.1059G>C synonymous_variant 0.29
rpoC 764431 c.1062G>C synonymous_variant 0.28
rpoC 764434 c.1065A>G synonymous_variant 0.28
rpoC 764446 c.1077T>C synonymous_variant 0.28
rpoC 764449 c.1080G>C synonymous_variant 0.25
rpoC 764452 c.1083T>C synonymous_variant 0.29
rpoC 764458 c.1089G>C synonymous_variant 0.3
rpoC 764461 c.1092A>G synonymous_variant 0.3
rpoC 764489 c.1120C>T synonymous_variant 0.23
rpoC 764497 c.1128A>G synonymous_variant 0.24
rpoC 764506 c.1137C>T synonymous_variant 0.28
rpoC 764510 c.1141C>T synonymous_variant 0.27
rpoC 764521 c.1152T>C synonymous_variant 0.25
rpoC 764524 c.1155C>T synonymous_variant 0.25
rpoC 764527 c.1158C>T synonymous_variant 0.26
rpoC 764536 c.1167G>C synonymous_variant 0.28
rpoC 764539 c.1170C>G synonymous_variant 0.28
rpoC 764554 c.1185C>T synonymous_variant 0.26
rpoC 764560 c.1191T>C synonymous_variant 0.28
rpoC 764566 c.1197C>G synonymous_variant 0.26
rpoC 764575 c.1206T>G synonymous_variant 0.21
rpoC 764576 c.1207_1208delTCinsAG synonymous_variant 0.22
rpoC 764593 c.1224C>T synonymous_variant 0.24
rpoC 764611 c.1242G>T synonymous_variant 0.25
rpoC 764626 c.1257C>T synonymous_variant 0.23
rpoC 764632 c.1263T>C synonymous_variant 0.23
rpoC 764650 c.1281G>T synonymous_variant 0.22
rpoC 764665 c.1296C>G synonymous_variant 0.3
rpoC 764713 c.1344G>C synonymous_variant 0.29
rpoC 764716 c.1347G>C synonymous_variant 0.31
rpoC 764752 c.1383G>C synonymous_variant 0.36
rpoC 764764 c.1395T>C synonymous_variant 0.37
rpoC 764797 c.1428G>C synonymous_variant 0.38
rpoC 764803 c.1434C>T synonymous_variant 0.31
rpoC 764809 c.1440C>T synonymous_variant 0.29
rpoC 764815 c.1446A>G synonymous_variant 0.27
rpoC 764827 c.1458G>C synonymous_variant 0.28
rpoC 764858 c.1489T>C synonymous_variant 0.28
rpoC 764888 c.1519T>C synonymous_variant 0.24
rpoC 764893 c.1524T>C synonymous_variant 0.22
rpoC 764911 c.1542A>G synonymous_variant 0.24
rpoC 764932 c.1563C>A synonymous_variant 0.22
rpoC 764935 c.1566T>C synonymous_variant 0.21
rpoC 764948 c.1579T>C synonymous_variant 0.21
rpoC 764968 c.1599T>C synonymous_variant 0.22
rpoC 764995 c.1626C>G synonymous_variant 0.95
rpoC 765343 c.1974G>C synonymous_variant 0.18
rpoC 765352 c.1983G>C synonymous_variant 0.22
rpoC 765370 c.2001G>C synonymous_variant 0.29
rpoC 765371 c.2002C>T synonymous_variant 0.29
rpoC 765383 p.Met672Leu missense_variant 0.3
rpoC 765404 p.Leu679Val missense_variant 0.28
rpoC 765409 c.2040T>C synonymous_variant 0.3
rpoC 765421 c.2052C>G synonymous_variant 0.3
rpoC 765451 c.2082C>G synonymous_variant 0.23
rpoC 765452 p.Ala695Ser missense_variant 0.23
rpoC 765478 c.2109T>C synonymous_variant 0.26
rpoC 765499 c.2130C>G synonymous_variant 0.3
rpoC 765508 c.2139C>G synonymous_variant 0.26
rpoC 765529 c.2160C>T synonymous_variant 0.24
rpoC 765541 c.2172C>G synonymous_variant 0.24
rpoC 765553 c.2184C>T synonymous_variant 0.25
rpoC 765556 c.2187G>C synonymous_variant 0.26
rpoC 765559 c.2190G>C synonymous_variant 0.28
rpoC 765580 c.2211G>C synonymous_variant 0.3
rpoC 765613 p.His748Gln missense_variant 0.38
rpoC 765625 c.2256C>G synonymous_variant 0.38
rpoC 765628 c.2259G>C synonymous_variant 0.38
rpoC 765631 p.Asp754Glu missense_variant 0.38
rpoC 765658 c.2289C>T synonymous_variant 0.4
rpoC 765700 c.2331T>C synonymous_variant 0.4
rpoC 765734 c.2365T>C synonymous_variant 0.5
rpoC 765739 c.2370G>T synonymous_variant 0.52
rpoC 765751 c.2382C>G synonymous_variant 0.45
rpoC 765753 p.Asp795Ala missense_variant 0.45
rpoC 765772 c.2403C>G synonymous_variant 0.42
rpoC 765784 c.2415C>G synonymous_variant 0.4
rpoC 765793 c.2424C>G synonymous_variant 0.43
rpoC 765796 c.2427C>T synonymous_variant 0.44
rpoC 765811 c.2442T>G synonymous_variant 0.48
rpoC 765826 c.2457T>C synonymous_variant 0.45
rpoC 765835 c.2466C>T synonymous_variant 0.52
rpoC 765883 c.2514C>G synonymous_variant 0.44
rpoC 765886 c.2517C>G synonymous_variant 0.47
rpoC 765892 c.2523T>C synonymous_variant 0.49
rpoC 765967 c.2598C>T synonymous_variant 0.42
rpoC 765979 c.2610C>G synonymous_variant 0.39
rpoC 765982 c.2613C>T synonymous_variant 0.37
rpoC 765994 c.2625A>T synonymous_variant 0.4
rpoC 766009 c.2640G>C synonymous_variant 0.32
rpoC 766010 c.2641_2642delTCinsAG synonymous_variant 0.31
rpoC 766021 c.2652G>C synonymous_variant 0.38
rpoC 766027 c.2658G>C synonymous_variant 0.41
rpoC 766043 p.Gln892Glu missense_variant 0.39
rpoC 766054 c.2685C>G synonymous_variant 0.39
rpoC 766061 p.Val898Ile missense_variant 0.44
rpoC 766082 p.Ala905Gln missense_variant 0.33
rpoC 766105 c.2736C>T synonymous_variant 0.26
rpoC 766129 c.2760C>G synonymous_variant 0.28
rpoC 766135 c.2766G>A synonymous_variant 0.26
rpoC 766141 c.2772C>T synonymous_variant 0.24
rpoC 766142 c.2773C>T synonymous_variant 0.24
rpoC 766147 c.2778C>T synonymous_variant 0.19
rpoC 766148 p.Thr927Ala missense_variant 0.21
rpoC 766390 c.3021C>T synonymous_variant 0.2
rpoC 766408 c.3039C>T synonymous_variant 0.32
rpoC 766426 c.3057C>T synonymous_variant 0.42
rpoC 766447 c.3078T>C synonymous_variant 0.42
rpoC 766459 c.3090G>C synonymous_variant 0.38
rpoC 766483 c.3114G>C synonymous_variant 0.31
rpoC 766484 p.Val1039Ile missense_variant 0.32
rpoC 766492 c.3123T>C synonymous_variant 0.34
rpoC 766495 c.3126C>T synonymous_variant 0.36
rpoC 766522 c.3153C>G synonymous_variant 0.44
rpoC 766528 c.3159T>C synonymous_variant 0.44
rpoC 766531 c.3162G>T synonymous_variant 0.47
rpoC 766540 p.Asp1057Glu missense_variant 0.43
rpoC 766549 c.3180G>C synonymous_variant 0.43
rpoC 766573 c.3204T>C synonymous_variant 0.36
rpoC 766582 c.3213C>G synonymous_variant 0.29
rpoC 766583 p.Gly1072Ser missense_variant 0.29
rpoC 766591 c.3222A>G synonymous_variant 0.29
rpoC 766594 c.3225G>C synonymous_variant 0.31
rpoC 766597 c.3228C>G synonymous_variant 0.32
rpoC 766607 p.Ile1080Leu missense_variant 0.37
rpoC 766657 c.3288A>G synonymous_variant 0.39
rpoC 766672 c.3303T>C synonymous_variant 0.36
rpoC 766673 p.Gly1102Asn missense_variant 0.35
rpoC 766726 c.3357T>C synonymous_variant 0.4
rpoC 766738 c.3369G>C synonymous_variant 0.46
rpoC 766765 c.3396A>C synonymous_variant 0.46
rpoC 766774 c.3405T>C synonymous_variant 0.47
rpoC 766801 c.3432C>G synonymous_variant 0.44
rpoC 766804 c.3435A>G synonymous_variant 0.43
rpoC 766861 c.3492G>C synonymous_variant 0.49
rpoC 766864 c.3495G>C synonymous_variant 0.49
rpoC 766894 c.3525T>C synonymous_variant 0.5
rpoC 766895 c.3526T>C synonymous_variant 0.5
rpoC 766900 c.3531T>C synonymous_variant 0.53
rpoC 766903 c.3534C>T synonymous_variant 0.53
rpoC 766918 c.3549C>T synonymous_variant 0.49
rpoC 766933 c.3564A>G synonymous_variant 0.51
rpoC 766945 c.3576A>G synonymous_variant 0.5
rpoC 766963 c.3594T>C synonymous_variant 0.47
rpoC 766972 c.3603G>C synonymous_variant 0.51
rpoC 766996 c.3627C>T synonymous_variant 0.5
rpoC 767032 c.3663G>T synonymous_variant 0.47
rpoC 767035 c.3666G>T synonymous_variant 0.47
rpoC 767059 c.3690T>G synonymous_variant 0.53
rpoC 767062 c.3693C>A synonymous_variant 0.54
rpoC 767098 c.3729T>C synonymous_variant 0.52
rpoC 767119 c.3750A>G synonymous_variant 0.5
rpoC 767134 c.3765C>A synonymous_variant 0.44
rpoC 767158 c.3789T>C synonymous_variant 0.37
rpoC 767167 c.3798C>G synonymous_variant 0.38
rpoC 767180 p.Ala1271Gln missense_variant 0.37
rpoC 767191 c.3822C>G synonymous_variant 0.27
rpoC 767200 c.3831G>A synonymous_variant 0.28
rpoC 767206 c.3837C>G synonymous_variant 0.25
rpoC 767209 c.3840T>C synonymous_variant 0.25
rpoC 767212 c.3843G>C synonymous_variant 0.24
rpoC 767221 c.3852C>G synonymous_variant 0.26
rpoC 767230 c.3861G>C synonymous_variant 0.22
rpoC 767233 c.3864T>C synonymous_variant 0.22
rpoC 767263 c.3894T>C synonymous_variant 0.19
rpoC 767264 p.Ala1299Gln missense_variant 0.21
rpoC 767284 c.3915C>G synonymous_variant 0.2
mmpL5 775639 p.Ile948Val missense_variant 1.0
mmpL5 777116 c.1365C>T synonymous_variant 0.18
mmpL5 777133 p.Val450Ile missense_variant 0.25
mmpL5 777158 c.1323C>G synonymous_variant 0.31
mmpL5 777164 c.1317C>G synonymous_variant 0.3
mmpL5 777170 c.1311T>C synonymous_variant 0.3
mmpL5 777173 c.1308C>G synonymous_variant 0.3
mmpL5 777176 p.Glu435Asp missense_variant 0.29
mmpL5 777191 c.1290C>G synonymous_variant 0.23
mmpL5 777206 c.1275A>G synonymous_variant 0.23
mmpL5 777212 p.Ala423Thr missense_variant 0.23
mmpL5 777215 c.1266C>G synonymous_variant 0.23
mmpL5 777218 c.1263G>A synonymous_variant 0.24
mmpL5 777221 c.1260C>T synonymous_variant 0.23
mmpL5 777251 c.1230C>A synonymous_variant 0.21
rpsL 781395 c.-165T>C upstream_gene_variant 1.0
rpsL 781571 c.12C>T synonymous_variant 0.25
rpsL 781595 c.36T>C synonymous_variant 0.26
rpsL 781598 c.39G>C synonymous_variant 0.24
rpsL 781605 p.Ile16Val missense_variant 0.23
rpsL 781608 p.Ser17Ala missense_variant 0.22
rpsL 781610 c.51T>C synonymous_variant 0.24
rpsL 781628 c.69T>C synonymous_variant 0.21
rpsL 781631 c.72G>C synonymous_variant 0.21
rpsL 781649 c.90T>C synonymous_variant 0.27
rpsL 781655 c.96T>C synonymous_variant 0.25
rpsL 781700 c.141G>C synonymous_variant 0.32
rpsL 781703 c.144G>T synonymous_variant 0.29
rpsL 781715 c.156T>C synonymous_variant 0.28
rpsL 781728 c.169T>C synonymous_variant 0.26
rpsL 781736 c.177T>C synonymous_variant 0.29
rpsL 781742 c.183C>T synonymous_variant 0.31
rpsL 781754 c.195G>C synonymous_variant 0.32
rpsL 781760 c.201T>C synonymous_variant 0.36
rpsL 781769 c.210G>A synonymous_variant 0.34
rpsL 781772 c.213C>T synonymous_variant 0.34
rpsL 781808 c.249C>T synonymous_variant 0.37
rpsL 781811 c.252C>T synonymous_variant 0.37
rpsL 781832 c.273T>C synonymous_variant 0.36
rpsL 781838 c.279G>C synonymous_variant 0.34
rpsL 781841 c.282C>G synonymous_variant 0.34
rpsL 781865 c.306G>C synonymous_variant 0.3
rpsL 781868 c.309T>C synonymous_variant 0.31
rpsL 781871 c.312G>C synonymous_variant 0.29
rpsL 781877 c.318T>C synonymous_variant 0.26
rpsL 781892 c.333A>G synonymous_variant 0.27
rpsL 781898 c.339A>T synonymous_variant 0.3
rpsL 781916 c.357T>C synonymous_variant 0.31
rpsL 781929 p.Gly124Ser missense_variant 0.36
rplC 800612 c.-197A>G upstream_gene_variant 0.42
rplC 800618 c.-191T>C upstream_gene_variant 0.45
rplC 800627 c.-182C>T upstream_gene_variant 0.49
rplC 800648 c.-161A>T upstream_gene_variant 0.46
rplC 800654 c.-155T>C upstream_gene_variant 0.44
rplC 800693 c.-116A>G upstream_gene_variant 0.45
rplC 800703 c.-106T>C upstream_gene_variant 0.46
rplC 800715 c.-94A>C upstream_gene_variant 0.39
rplC 800720 c.-89T>C upstream_gene_variant 0.38
rplC 800723 c.-86C>G upstream_gene_variant 0.35
rplC 800747 c.-62C>G upstream_gene_variant 0.29
rplC 800771 c.-38C>T upstream_gene_variant 0.26
rplC 801246 c.438C>T synonymous_variant 0.18
rplC 801255 c.447C>T synonymous_variant 0.2
rplC 801267 c.459A>T synonymous_variant 0.19
rplC 801270 c.462T>C synonymous_variant 0.2
rplC 801282 c.474G>C synonymous_variant 0.2
rplC 801300 c.492C>G synonymous_variant 0.21
rplC 801309 c.501C>G synonymous_variant 0.24
rplC 801312 c.504G>C synonymous_variant 0.22
rplC 801321 c.513C>T synonymous_variant 0.23
rplC 801324 c.516T>C synonymous_variant 0.22
rplC 801339 c.531T>C synonymous_variant 0.21
rplC 801341 p.Leu178Gln missense_variant 0.21
rplC 801348 c.540T>G synonymous_variant 0.21
rplC 801357 c.549T>C synonymous_variant 0.21
rplC 801367 p.Ala187Thr missense_variant 0.23
rplC 801426 c.618C>G synonymous_variant 0.2
rplC 801427 p.Met207Val missense_variant 0.2
rplC 801438 c.630T>C synonymous_variant 0.23
rplC 801442 p.Ile212Val missense_variant 0.24
fbiC 1303480 p.Gln184Glu missense_variant 0.19
fbiC 1303489 c.559C>T synonymous_variant 0.24
fbiC 1303509 c.579G>C synonymous_variant 0.37
fbiC 1303521 c.591C>T synonymous_variant 0.38
fbiC 1303530 c.600G>A synonymous_variant 0.38
fbiC 1303534 p.Ser202Ala missense_variant 0.39
fbiC 1303545 c.615A>G synonymous_variant 0.34
fbiC 1303575 c.645G>C synonymous_variant 0.26
fbiC 1303584 c.654C>G synonymous_variant 0.3
fbiC 1303590 c.660A>G synonymous_variant 0.29
fbiC 1303605 c.675C>G synonymous_variant 0.22
fbiC 1303608 c.678G>A synonymous_variant 0.21
fbiC 1303614 c.684C>T synonymous_variant 0.17
fbiC 1303623 c.693C>T synonymous_variant 0.18
fbiC 1303632 c.702T>G synonymous_variant 0.22
fbiC 1303671 c.741C>T synonymous_variant 0.17
fbiC 1303695 c.765T>C synonymous_variant 0.22
fbiC 1303704 c.774T>C synonymous_variant 0.23
fbiC 1303708 c.778T>C synonymous_variant 0.25
fbiC 1303728 c.798G>A synonymous_variant 0.28
fbiC 1303731 c.801A>C synonymous_variant 0.25
fbiC 1303732 p.Ser268Ala missense_variant 0.28
fbiC 1303737 c.807G>A synonymous_variant 0.24
fbiC 1303746 c.816T>C synonymous_variant 0.28
fbiC 1303749 c.819G>C synonymous_variant 0.26
fbiC 1303752 c.822A>G synonymous_variant 0.26
fbiC 1303755 c.825T>C synonymous_variant 0.26
fbiC 1303764 c.834C>T synonymous_variant 0.29
fbiC 1303785 c.855G>C synonymous_variant 0.24
fbiC 1303789 p.Ile287Val missense_variant 0.26
fbiC 1303797 c.867A>G synonymous_variant 0.26
fbiC 1303818 c.888C>G synonymous_variant 0.26
fbiC 1303836 c.906G>C synonymous_variant 0.23
fbiC 1303843 p.Ala305Thr missense_variant 0.2
fbiC 1303846 p.Phe306Val missense_variant 0.2
fbiC 1303854 c.924T>C synonymous_variant 0.25
fbiC 1303860 c.930A>C synonymous_variant 0.27
fbiC 1303881 c.951G>C synonymous_variant 0.35
fbiC 1303884 c.954T>G synonymous_variant 0.36
fbiC 1303905 c.975G>C synonymous_variant 0.42
fbiC 1303911 c.981G>C synonymous_variant 0.39
fbiC 1303914 c.984C>G synonymous_variant 0.4
fbiC 1303944 c.1014G>C synonymous_variant 0.33
fbiC 1303947 c.1017T>G synonymous_variant 0.34
fbiC 1303948 p.Gly340Arg missense_variant 0.34
fbiC 1303956 c.1026A>G synonymous_variant 0.34
fbiC 1303961 p.Arg344Leu missense_variant 0.38
fbiC 1303971 c.1041T>C synonymous_variant 0.38
fbiC 1303973 p.Gly348Ala missense_variant 0.39
fbiC 1303980 c.1050G>A synonymous_variant 0.41
fbiC 1304004 c.1074A>G synonymous_variant 0.42
fbiC 1304008 c.1078_1080delTTGinsCTC synonymous_variant 0.42
fbiC 1304022 c.1092T>C synonymous_variant 0.44
fbiC 1304031 c.1101C>G synonymous_variant 0.37
fbiC 1304040 c.1110C>A synonymous_variant 0.35
fbiC 1304046 c.1116C>G synonymous_variant 0.33
fbiC 1304049 c.1119T>A synonymous_variant 0.31
fbiC 1304050 c.1120T>C synonymous_variant 0.3
fbiC 1304058 c.1128G>A synonymous_variant 0.28
fbiC 1304059 c.1129C>T synonymous_variant 0.28
fbiC 1304064 c.1134G>C synonymous_variant 0.28
fbiC 1304067 c.1137G>C synonymous_variant 0.3
fbiC 1304091 p.Asp387Glu missense_variant 0.38
fbiC 1304092 p.Met388Leu missense_variant 0.38
fbiC 1304097 c.1167G>C synonymous_variant 0.4
fbiC 1304115 c.1185A>G synonymous_variant 0.42
fbiC 1304127 c.1197A>G synonymous_variant 0.34
fbiC 1304132 p.Ala401Gly missense_variant 0.32
fbiC 1304154 c.1224G>C synonymous_variant 0.31
fbiC 1304162 p.Arg411Gln missense_variant 0.2
fbiC 1304166 c.1236A>G synonymous_variant 0.19
fbiC 1304169 c.1239T>C synonymous_variant 0.2
fbiC 1304173 p.Val415Thr missense_variant 0.21
fbiC 1304178 c.1248G>A synonymous_variant 0.21
fbiC 1304181 c.1251G>A synonymous_variant 0.21
fbiC 1304199 c.1269C>T synonymous_variant 0.21
fbiC 1304613 c.1683T>A synonymous_variant 0.26
fbiC 1304634 c.1704C>G synonymous_variant 0.33
fbiC 1304640 c.1710A>C synonymous_variant 0.31
fbiC 1304646 c.1716T>C synonymous_variant 0.28
fbiC 1304658 c.1728C>G synonymous_variant 0.25
fbiC 1304661 c.1731C>T synonymous_variant 0.22
fbiC 1304670 c.1740G>C synonymous_variant 0.2
fbiC 1304671 p.Val581Thr missense_variant 0.2
fbiC 1304675 p.Gly582Asp missense_variant 0.21
fbiC 1304691 c.1761G>C synonymous_variant 0.27
fbiC 1304694 c.1764A>C synonymous_variant 0.27
fbiC 1304703 c.1773C>G synonymous_variant 0.29
fbiC 1304711 p.Ala594Glu missense_variant 0.33
fbiC 1304715 c.1785G>C synonymous_variant 0.34
fbiC 1304724 c.1794A>G synonymous_variant 0.4
fbiC 1304727 c.1797A>G synonymous_variant 0.39
fbiC 1304742 c.1812T>C synonymous_variant 0.43
fbiC 1304757 c.1827A>G synonymous_variant 0.43
fbiC 1304778 c.1848T>C synonymous_variant 0.43
fbiC 1304784 c.1854T>C synonymous_variant 0.43
fbiC 1304787 c.1857T>G synonymous_variant 0.44
fbiC 1304799 c.1869G>T synonymous_variant 0.49
fbiC 1304808 c.1878C>G synonymous_variant 0.44
fbiC 1304811 c.1881C>G synonymous_variant 0.45
fbiC 1304817 c.1887T>C synonymous_variant 0.5
fbiC 1304829 c.1899T>C synonymous_variant 0.54
fbiC 1304832 c.1902C>T synonymous_variant 0.54
fbiC 1304853 c.1923C>T synonymous_variant 0.55
fbiC 1304856 c.1926C>G synonymous_variant 0.52
fbiC 1304869 c.1939C>T synonymous_variant 0.51
fbiC 1304875 p.Ile649Val missense_variant 0.5
fbiC 1304883 p.Glu651Asp missense_variant 0.49
fbiC 1304889 c.1959G>C synonymous_variant 0.46
fbiC 1304891 p.Ile654Thr missense_variant 0.43
fbiC 1304893 p.Gly655Ser missense_variant 0.43
fbiC 1304907 c.1977C>G synonymous_variant 0.38
fbiC 1304910 c.1980G>C synonymous_variant 0.39
fbiC 1304916 c.1986T>C synonymous_variant 0.37
fbiC 1304925 c.1995G>C synonymous_variant 0.37
fbiC 1304928 c.1998T>C synonymous_variant 0.37
fbiC 1304937 c.2007G>C synonymous_variant 0.35
fbiC 1304940 c.2010A>G synonymous_variant 0.37
fbiC 1304955 c.2025G>A synonymous_variant 0.31
fbiC 1304958 c.2028T>G synonymous_variant 0.33
atpE 1460852 c.-193C>G upstream_gene_variant 0.29
atpE 1460855 c.-190T>C upstream_gene_variant 0.31
atpE 1460858 c.-187C>G upstream_gene_variant 0.31
atpE 1460861 c.-184C>G upstream_gene_variant 0.31
atpE 1460882 c.-163T>C upstream_gene_variant 0.2
atpE 1460897 c.-148A>C upstream_gene_variant 0.21
atpE 1461113 c.69C>T synonymous_variant 0.16
atpE 1461158 c.114T>C synonymous_variant 0.18
atpE 1461170 c.126A>G synonymous_variant 0.2
atpE 1461185 c.141G>C synonymous_variant 0.21
atpE 1461194 c.150C>T synonymous_variant 0.25
atpE 1461197 c.153A>G synonymous_variant 0.25
atpE 1461219 c.175T>C synonymous_variant 0.23
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1472029 n.184C>T non_coding_transcript_exon_variant 0.17
rrs 1472030 n.185G>T non_coding_transcript_exon_variant 0.23
rrs 1472031 n.186G>A non_coding_transcript_exon_variant 0.17
rrs 1472034 n.189T>C non_coding_transcript_exon_variant 0.2
rrs 1472044 n.199G>T non_coding_transcript_exon_variant 0.24
rrs 1472053 n.211_212delGC non_coding_transcript_exon_variant 0.3
rrs 1472061 n.216A>T non_coding_transcript_exon_variant 0.31
rrs 1472075 n.230A>G non_coding_transcript_exon_variant 0.38
rrs 1472108 n.263C>T non_coding_transcript_exon_variant 0.37
rrs 1472300 n.455C>T non_coding_transcript_exon_variant 0.46
rrs 1472969 n.1124A>G non_coding_transcript_exon_variant 0.38
rrs 1472970 n.1125C>G non_coding_transcript_exon_variant 0.35
rrs 1472977 n.1132G>C non_coding_transcript_exon_variant 0.37
rrs 1472978 n.1133T>C non_coding_transcript_exon_variant 0.37
rrs 1473105 n.1260G>A non_coding_transcript_exon_variant 0.48
rrs 1473145 n.1300C>T non_coding_transcript_exon_variant 0.47
rrs 1473166 n.1321G>A non_coding_transcript_exon_variant 0.39
rrs 1473290 n.1445C>T non_coding_transcript_exon_variant 0.27
rrl 1473668 n.11C>T non_coding_transcript_exon_variant 0.17
rrl 1473756 n.99G>A non_coding_transcript_exon_variant 0.39
rrl 1473758 n.101G>T non_coding_transcript_exon_variant 0.38
rrl 1473806 n.149C>T non_coding_transcript_exon_variant 0.38
rrl 1473877 n.220G>A non_coding_transcript_exon_variant 0.26
rrl 1473898 n.241C>T non_coding_transcript_exon_variant 0.21
rrl 1473899 n.242A>C non_coding_transcript_exon_variant 0.2
rrl 1473938 n.281G>A non_coding_transcript_exon_variant 0.32
rrl 1473939 n.282C>T non_coding_transcript_exon_variant 0.32
rrl 1473943 n.286G>T non_coding_transcript_exon_variant 0.33
rrl 1473986 n.329T>C non_coding_transcript_exon_variant 0.48
rrl 1473995 n.338G>T non_coding_transcript_exon_variant 0.56
rrl 1474001 n.344C>T non_coding_transcript_exon_variant 0.53
rrl 1474009 n.352A>G non_coding_transcript_exon_variant 0.45
rrl 1474012 n.355C>T non_coding_transcript_exon_variant 0.45
rrl 1474044 n.387C>T non_coding_transcript_exon_variant 0.46
rrl 1474054 n.397T>C non_coding_transcript_exon_variant 0.45
rrl 1474093 n.436G>T non_coding_transcript_exon_variant 0.31
rrl 1474099 n.442G>A non_coding_transcript_exon_variant 0.29
rrl 1474103 n.446A>T non_coding_transcript_exon_variant 0.3
rrl 1474140 n.483C>T non_coding_transcript_exon_variant 0.35
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 0.34
rrl 1474181 n.524C>T non_coding_transcript_exon_variant 0.4
rrl 1474249 n.592G>T non_coding_transcript_exon_variant 0.37
rrl 1474291 n.635_649delTTCCTCTCCGGAGGA non_coding_transcript_exon_variant 0.3
rrl 1474308 n.651G>T non_coding_transcript_exon_variant 0.29
rrl 1474310 n.653T>G non_coding_transcript_exon_variant 0.29
rrl 1474356 n.699T>C non_coding_transcript_exon_variant 0.25
rrl 1474362 n.705A>G non_coding_transcript_exon_variant 0.28
rrl 1474376 n.719T>C non_coding_transcript_exon_variant 0.25
rrl 1474639 n.982G>A non_coding_transcript_exon_variant 0.46
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 0.41
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 0.39
rrl 1474823 n.1166C>T non_coding_transcript_exon_variant 0.38
rrl 1474831 n.1174A>G non_coding_transcript_exon_variant 0.38
rrl 1474904 n.1247G>A non_coding_transcript_exon_variant 0.33
rrl 1474956 n.1299C>T non_coding_transcript_exon_variant 0.3
rrl 1474960 n.1303C>G non_coding_transcript_exon_variant 0.31
rrl 1474962 n.1305T>C non_coding_transcript_exon_variant 0.32
rrl 1474963 n.1306G>T non_coding_transcript_exon_variant 0.31
rrl 1474964 n.1307T>A non_coding_transcript_exon_variant 0.32
rrl 1474965 n.1308G>C non_coding_transcript_exon_variant 0.31
rrl 1474970 n.1313G>A non_coding_transcript_exon_variant 0.34
rrl 1475006 n.1349A>C non_coding_transcript_exon_variant 0.25
rrl 1475013 n.1356G>A non_coding_transcript_exon_variant 0.28
rrl 1475061 n.1404C>T non_coding_transcript_exon_variant 0.34
rrl 1475088 n.1431A>T non_coding_transcript_exon_variant 0.2
rrl 1475313 n.1656G>A non_coding_transcript_exon_variant 0.18
rrl 1475315 n.1658A>T non_coding_transcript_exon_variant 0.18
rrl 1475355 n.1698C>T non_coding_transcript_exon_variant 0.29
rrl 1475369 n.1712G>T non_coding_transcript_exon_variant 0.3
rrl 1475402 n.1745C>T non_coding_transcript_exon_variant 0.3
rrl 1475419 n.1762C>T non_coding_transcript_exon_variant 0.23
rrl 1475436 n.1779C>T non_coding_transcript_exon_variant 0.28
rrl 1475483 n.1826C>T non_coding_transcript_exon_variant 0.18
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 0.24
rrl 1475573 n.1916G>A non_coding_transcript_exon_variant 0.41
rrl 1475599 n.1942A>G non_coding_transcript_exon_variant 0.32
rrl 1475608 n.1951T>C non_coding_transcript_exon_variant 0.38
rrl 1475642 n.1985T>C non_coding_transcript_exon_variant 0.33
rrl 1475657 n.2000A>G non_coding_transcript_exon_variant 0.32
rrl 1475659 n.2002G>T non_coding_transcript_exon_variant 0.32
rrl 1475765 n.2111delG non_coding_transcript_exon_variant 0.24
rrl 1475881 n.2224T>C non_coding_transcript_exon_variant 0.28
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.3
rrl 1476031 n.2374C>T non_coding_transcript_exon_variant 0.22
rrl 1476032 n.2375C>A non_coding_transcript_exon_variant 0.22
rrl 1476033 n.2376T>C non_coding_transcript_exon_variant 0.22
rrl 1476034 n.2377C>A non_coding_transcript_exon_variant 0.22
rrl 1476045 n.2388G>T non_coding_transcript_exon_variant 0.25
rrl 1476047 n.2390G>T non_coding_transcript_exon_variant 0.25
rrl 1476048 n.2391G>A non_coding_transcript_exon_variant 0.25
rrl 1476049 n.2392C>T non_coding_transcript_exon_variant 0.25
rrl 1476086 n.2429G>A non_coding_transcript_exon_variant 0.29
rrl 1476089 n.2432T>C non_coding_transcript_exon_variant 0.29
rrl 1476095 n.2438C>G non_coding_transcript_exon_variant 0.27
rrl 1476103 n.2446C>G non_coding_transcript_exon_variant 0.21
rrl 1476105 n.2448G>A non_coding_transcript_exon_variant 0.21
rrl 1476106 n.2449A>T non_coding_transcript_exon_variant 0.23
rrl 1476110 n.2453G>C non_coding_transcript_exon_variant 0.23
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 0.2
rrl 1476117 n.2460G>C non_coding_transcript_exon_variant 0.2
rrl 1476131 n.2474C>T non_coding_transcript_exon_variant 0.27
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.29
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 0.28
rrl 1476583 n.2926G>A non_coding_transcript_exon_variant 0.35
rrl 1476584 n.2927C>T non_coding_transcript_exon_variant 0.35
rrl 1476594 n.2937C>T non_coding_transcript_exon_variant 0.35
rrl 1476597 n.2940G>A non_coding_transcript_exon_variant 0.37
rrl 1476603 n.2946G>A non_coding_transcript_exon_variant 0.37
rrl 1476608 n.2951C>G non_coding_transcript_exon_variant 0.36
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 0.44
rrl 1476689 n.3032A>T non_coding_transcript_exon_variant 0.23
rrl 1476690 n.3033C>T non_coding_transcript_exon_variant 0.22
rrl 1476693 n.3036G>A non_coding_transcript_exon_variant 0.22
rrl 1476695 n.3038T>A non_coding_transcript_exon_variant 0.21
rrl 1476716 n.3059A>C non_coding_transcript_exon_variant 0.22
rrl 1476723 n.3066T>A non_coding_transcript_exon_variant 0.22
rrl 1476726 n.3069A>G non_coding_transcript_exon_variant 0.21
inhA 1673574 c.-628C>G upstream_gene_variant 0.18
inhA 1673580 c.-622T>C upstream_gene_variant 0.19
inhA 1673607 c.-595T>C upstream_gene_variant 0.21
inhA 1673616 c.-586A>G upstream_gene_variant 0.24
inhA 1673619 c.-583T>C upstream_gene_variant 0.24
fabG1 1673633 p.Ser65Asn missense_variant 0.27
fabG1 1673641 p.Val68Ile missense_variant 0.26
fabG1 1673657 p.Thr73Lys missense_variant 0.21
fabG1 1674006 p.Asp189Glu missense_variant 0.21
inhA 1674012 c.-190C>T upstream_gene_variant 0.24
inhA 1674024 c.-178T>C upstream_gene_variant 0.26
inhA 1674033 c.-169T>C upstream_gene_variant 0.24
fabG1 1674037 p.Gln200Ala missense_variant 0.24
inhA 1674042 c.-160G>C upstream_gene_variant 0.23
inhA 1674045 c.-157G>A upstream_gene_variant 0.23
fabG1 1674049 p.Gln204Glu missense_variant 0.25
inhA 1674054 c.-148T>C upstream_gene_variant 0.27
inhA 1674060 c.-142A>G upstream_gene_variant 0.25
inhA 1674063 c.-139G>C upstream_gene_variant 0.27
inhA 1674069 c.-133G>C upstream_gene_variant 0.28
inhA 1674072 c.-130C>G upstream_gene_variant 0.29
fabG1 1674079 p.Pro214Ala missense_variant 0.28
inhA 1674114 c.-88T>G upstream_gene_variant 0.25
inhA 1674123 c.-79T>C upstream_gene_variant 0.25
inhA 1674126 c.-76G>C upstream_gene_variant 0.23
inhA 1674132 c.-70T>C upstream_gene_variant 0.24
fabG1 1674136 p.Ser233Ala missense_variant 0.21
inhA 1674504 c.303C>G synonymous_variant 0.22
inhA 1674507 c.306G>A synonymous_variant 0.21
inhA 1674514 p.Ile105Val missense_variant 0.19
inhA 1674537 c.336C>G synonymous_variant 0.24
inhA 1674542 p.Ala114Glu missense_variant 0.25
inhA 1674546 c.345T>C synonymous_variant 0.26
inhA 1674549 c.348G>C synonymous_variant 0.26
inhA 1674555 c.354G>A synonymous_variant 0.27
inhA 1674561 c.360C>T synonymous_variant 0.29
inhA 1674582 c.381T>C synonymous_variant 0.29
inhA 1674585 c.384T>C synonymous_variant 0.29
inhA 1674589 p.Met130Leu missense_variant 0.28
inhA 1674601 p.Leu134Ala missense_variant 0.31
inhA 1674624 c.423A>C synonymous_variant 0.36
inhA 1674636 c.435C>G synonymous_variant 0.3
inhA 1674660 c.459G>C synonymous_variant 0.3
inhA 1674703 c.502T>C synonymous_variant 0.28
inhA 1674708 c.507G>A synonymous_variant 0.28
inhA 1674718 c.517_519delAGGinsCGT synonymous_variant 0.23
inhA 1674732 c.531C>T synonymous_variant 0.28
inhA 1674738 c.537C>G synonymous_variant 0.28
inhA 1674746 p.Tyr182Phe missense_variant 0.27
inhA 1674753 c.552G>C synonymous_variant 0.25
inhA 1674756 c.555T>C synonymous_variant 0.25
inhA 1674759 c.558G>C synonymous_variant 0.22
inhA 1674774 c.573A>C synonymous_variant 0.23
inhA 1674780 c.579T>G synonymous_variant 0.24
inhA 1674795 c.594G>A synonymous_variant 0.22
inhA 1674801 c.600T>C synonymous_variant 0.22
inhA 1674816 c.615T>C synonymous_variant 0.34
inhA 1674846 p.Ile215Met missense_variant 0.31
inhA 1674849 c.648G>A synonymous_variant 0.29
inhA 1674861 c.660G>A synonymous_variant 0.25
inhA 1674870 c.669T>C synonymous_variant 0.27
inhA 1674879 c.678T>G synonymous_variant 0.26
inhA 1674903 c.702T>C synonymous_variant 0.26
inhA 1674904 p.Ala235Pro missense_variant 0.25
inhA 1674909 c.708G>A synonymous_variant 0.26
rpsA 1833595 c.54T>C synonymous_variant 0.2
rpsA 1833610 c.69C>T synonymous_variant 0.31
rpsA 1833661 c.120A>G synonymous_variant 0.37
rpsA 1833667 c.126C>G synonymous_variant 0.36
rpsA 1833724 c.183C>G synonymous_variant 0.42
rpsA 1833727 c.186G>C synonymous_variant 0.44
rpsA 1833742 c.201A>G synonymous_variant 0.47
rpsA 1833745 c.204G>C synonymous_variant 0.47
rpsA 1833748 c.207C>G synonymous_variant 0.47
rpsA 1833772 c.231C>T synonymous_variant 0.45
rpsA 1833787 c.246C>G synonymous_variant 0.38
rpsA 1833790 c.249T>C synonymous_variant 0.39
rpsA 1833808 c.267G>C synonymous_variant 0.37
rpsA 1833811 c.270G>T synonymous_variant 0.32
rpsA 1833835 c.294C>T synonymous_variant 0.32
rpsA 1833838 c.297G>C synonymous_variant 0.3
rpsA 1833841 c.300C>G synonymous_variant 0.31
rpsA 1833847 c.306C>G synonymous_variant 0.29
rpsA 1833856 c.315A>G synonymous_variant 0.27
rpsA 1833868 c.327C>T synonymous_variant 0.24
rpsA 1833874 c.333T>C synonymous_variant 0.24
rpsA 1833928 c.387G>C synonymous_variant 0.27
rpsA 1833940 c.399C>G synonymous_variant 0.24
rpsA 1833971 c.430C>T synonymous_variant 0.33
rpsA 1833979 c.438T>C synonymous_variant 0.36
rpsA 1834000 c.459G>C synonymous_variant 0.38
rpsA 1834021 c.480C>T synonymous_variant 0.36
rpsA 1834030 c.489C>G synonymous_variant 0.35
rpsA 1834102 c.561T>C synonymous_variant 0.33
rpsA 1834105 c.564C>G synonymous_variant 0.31
rpsA 1834108 c.567C>A synonymous_variant 0.32
rpsA 1834123 c.582C>G synonymous_variant 0.37
rpsA 1834150 c.609G>C synonymous_variant 0.31
rpsA 1834153 c.612T>C synonymous_variant 0.31
rpsA 1834154 p.Asn205Gln missense_variant 0.3
rpsA 1834157 c.616T>C synonymous_variant 0.3
rpsA 1834162 c.621A>G synonymous_variant 0.3
rpsA 1834165 c.624A>G synonymous_variant 0.29
rpsA 1834169 p.Thr210Ala missense_variant 0.29
rpsA 1834177 c.636A>C synonymous_variant 0.31
rpsA 1834189 c.648G>C synonymous_variant 0.3
rpsA 1834195 c.654G>C synonymous_variant 0.35
rpsA 1834222 c.681T>C synonymous_variant 0.31
rpsA 1834249 c.708T>C synonymous_variant 0.25
rpsA 1834261 c.720A>G synonymous_variant 0.26
rpsA 1834264 c.723G>C synonymous_variant 0.28
rpsA 1834297 c.756C>T synonymous_variant 0.34
rpsA 1834303 c.762T>G synonymous_variant 0.38
rpsA 1834306 c.765T>C synonymous_variant 0.38
rpsA 1834339 c.798C>T synonymous_variant 0.45
rpsA 1834348 c.807T>C synonymous_variant 0.49
rpsA 1834366 c.825A>G synonymous_variant 0.46
rpsA 1834396 c.855G>C synonymous_variant 0.49
rpsA 1834411 c.870T>C synonymous_variant 0.5
rpsA 1834417 c.876G>C synonymous_variant 0.46
rpsA 1834423 c.882G>C synonymous_variant 0.44
rpsA 1834435 c.894G>C synonymous_variant 0.47
rpsA 1834451 c.910T>C synonymous_variant 0.42
rpsA 1834465 c.924T>C synonymous_variant 0.43
rpsA 1834468 c.927A>G synonymous_variant 0.44
rpsA 1834474 c.933C>G synonymous_variant 0.47
rpsA 1834480 c.939C>G synonymous_variant 0.54
rpsA 1834489 c.948T>C synonymous_variant 0.47
rpsA 1834528 c.987T>C synonymous_variant 0.46
rpsA 1834540 c.999G>T synonymous_variant 0.48
rpsA 1834546 c.1005T>C synonymous_variant 0.5
rpsA 1834606 c.1065C>T synonymous_variant 0.37
rpsA 1834609 c.1068T>C synonymous_variant 0.35
rpsA 1834619 c.1078T>C synonymous_variant 0.35
rpsA 1834633 c.1092A>G synonymous_variant 0.34
rpsA 1834639 c.1098T>C synonymous_variant 0.35
rpsA 1834654 p.Glu371Asp missense_variant 0.33
rpsA 1834690 c.1149T>C synonymous_variant 0.49
rpsA 1834732 c.1191T>C synonymous_variant 0.5
rpsA 1834733 p.Ala398Ser missense_variant 0.5
rpsA 1834738 c.1197A>G synonymous_variant 0.52
rpsA 1834753 c.1212T>C synonymous_variant 0.5
rpsA 1834759 c.1218A>C synonymous_variant 0.52
rpsA 1834765 p.Glu408Asp missense_variant 0.47
rpsA 1834775 p.Ala412Thr missense_variant 0.45
rpsA 1834780 c.1239A>G synonymous_variant 0.42
rpsA 1834789 c.1248T>C synonymous_variant 0.34
rpsA 1834792 c.1251G>C synonymous_variant 0.36
tlyA 1917943 p.Ala2Ser missense_variant 0.17
tlyA 1917972 c.33A>G synonymous_variant 1.0
tlyA 1918002 c.63A>G synonymous_variant 0.26
tlyA 1918026 c.87C>G synonymous_variant 0.23
tlyA 1918036 p.Arg33Ser missense_variant 0.21
tlyA 1918048 p.Leu37Met missense_variant 0.25
ndh 2101894 c.1149T>C synonymous_variant 0.24
ndh 2101912 c.1131G>C synonymous_variant 0.25
ndh 2101918 c.1123_1125delAGGinsCGA synonymous_variant 0.25
ndh 2101924 c.1119T>G synonymous_variant 0.25
ndh 2102032 c.1011C>T synonymous_variant 0.15
ndh 2102038 c.1005C>T synonymous_variant 0.15
ndh 2102902 c.141C>G synonymous_variant 0.2
katG 2154279 c.1833C>T synonymous_variant 0.91
katG 2155054 p.Tyr353Phe missense_variant 0.17
katG 2155068 c.1044T>C synonymous_variant 0.21
katG 2155071 c.1041T>C synonymous_variant 0.21
katG 2155113 c.999C>G synonymous_variant 0.21
katG 2155119 c.991_993delAGTinsTCC synonymous_variant 0.21
katG 2155131 c.981A>G synonymous_variant 0.22
katG 2155140 c.972C>G synonymous_variant 0.22
katG 2155144 p.Asn323Pro missense_variant 0.23
katG 2155152 c.960A>C synonymous_variant 0.22
katG 2155704 c.408C>G synonymous_variant 0.19
katG 2155716 c.396T>G synonymous_variant 0.25
katG 2155722 c.390G>C synonymous_variant 0.29
katG 2155740 p.Gly124Gln missense_variant 0.27
katG 2155743 c.369G>C synonymous_variant 0.27
katG 2155782 c.330C>G synonymous_variant 0.18
katG 2155785 c.327T>C synonymous_variant 0.2
katG 2155796 p.Ala106Thr missense_variant 0.19
katG 2155800 c.312G>C synonymous_variant 0.2
katG 2155806 c.306T>C synonymous_variant 0.21
katG 2155836 c.276C>G synonymous_variant 0.19
katG 2155845 c.267G>C synonymous_variant 0.21
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0
kasA 2517917 c.-198G>C upstream_gene_variant 0.32
kasA 2517950 c.-165C>G upstream_gene_variant 0.2
kasA 2517974 c.-141T>C upstream_gene_variant 0.24
kasA 2517993 c.-122G>T upstream_gene_variant 0.19
kasA 2518504 c.390T>C synonymous_variant 0.3
kasA 2518506 p.Ala131Glu missense_variant 0.3
kasA 2518519 c.405G>C synonymous_variant 0.35
kasA 2518528 c.414C>G synonymous_variant 0.37
kasA 2518540 c.426T>G synonymous_variant 0.39
kasA 2518561 c.447T>C synonymous_variant 0.41
kasA 2518574 p.Ile154Val missense_variant 0.39
kasA 2518588 c.474T>C synonymous_variant 0.35
kasA 2518591 c.477G>C synonymous_variant 0.38
kasA 2518609 p.Met165Ile missense_variant 0.38
kasA 2518618 c.504G>T synonymous_variant 0.39
kasA 2518642 c.528A>G synonymous_variant 0.41
kasA 2518666 c.552G>A synonymous_variant 0.37
kasA 2518672 c.558G>C synonymous_variant 0.37
kasA 2518678 c.564C>T synonymous_variant 0.32
kasA 2518687 c.573C>T synonymous_variant 0.33
kasA 2518688 p.Val192Phe missense_variant 0.33
kasA 2518702 c.588C>T synonymous_variant 0.35
kasA 2518705 c.591T>C synonymous_variant 0.34
kasA 2518711 c.597A>G synonymous_variant 0.37
kasA 2518714 c.600A>C synonymous_variant 0.37
kasA 2518723 c.609G>A synonymous_variant 0.33
kasA 2518765 c.651G>C synonymous_variant 0.38
kasA 2518768 c.654C>T synonymous_variant 0.35
kasA 2518777 c.663C>T synonymous_variant 0.3
kasA 2518780 c.666G>A synonymous_variant 0.29
kasA 2518783 c.669T>C synonymous_variant 0.28
kasA 2518789 c.675G>C synonymous_variant 0.28
kasA 2518792 c.678C>A synonymous_variant 0.29
kasA 2518795 c.681C>G synonymous_variant 0.28
kasA 2518796 c.682C>A synonymous_variant 0.26
kasA 2518816 c.702C>T synonymous_variant 0.27
kasA 2518825 c.711T>C synonymous_variant 0.28
kasA 2518831 c.717C>T synonymous_variant 0.28
kasA 2518834 c.720C>T synonymous_variant 0.27
kasA 2518853 p.Leu247Ile missense_variant 0.23
kasA 2518864 c.750G>C synonymous_variant 0.21
kasA 2518879 c.765A>G synonymous_variant 0.22
kasA 2518885 c.771T>C synonymous_variant 0.24
kasA 2518921 c.807T>C synonymous_variant 0.18
kasA 2518939 c.825T>C synonymous_variant 0.2
kasA 2518942 c.828T>C synonymous_variant 0.2
kasA 2518954 c.840C>A synonymous_variant 0.21
kasA 2518957 c.843G>C synonymous_variant 0.22
kasA 2518990 c.876T>G synonymous_variant 0.25
kasA 2518993 c.879C>A synonymous_variant 0.26
kasA 2519008 c.894C>G synonymous_variant 0.31
kasA 2519017 c.903G>C synonymous_variant 0.27
kasA 2519020 c.906G>C synonymous_variant 0.24
kasA 2519021 p.Ala303Lys missense_variant 0.24
kasA 2519027 p.Ile305Val missense_variant 0.22
kasA 2519035 c.921C>T synonymous_variant 0.26
kasA 2519050 c.936C>G synonymous_variant 0.29
kasA 2519062 c.948T>G synonymous_variant 0.26
kasA 2519068 c.954C>T synonymous_variant 0.28
kasA 2519072 p.Ala320Thr missense_variant 0.29
kasA 2519095 c.981C>G synonymous_variant 0.34
kasA 2519107 c.993T>C synonymous_variant 0.33
kasA 2519108 p.Asp332Gln missense_variant 0.33
kasA 2519113 c.999G>A synonymous_variant 0.35
kasA 2519116 c.1002C>G synonymous_variant 0.35
kasA 2519122 c.1008G>C synonymous_variant 0.34
kasA 2519137 c.1023T>G synonymous_variant 0.28
kasA 2519158 c.1044C>T synonymous_variant 0.33
kasA 2519167 c.1053T>G synonymous_variant 0.35
kasA 2519173 c.1059C>G synonymous_variant 0.35
kasA 2519196 p.Thr361Ser missense_variant 0.31
kasA 2519215 c.1101C>T synonymous_variant 0.27
kasA 2519221 c.1107G>C synonymous_variant 0.24
kasA 2519225 c.1111C>T synonymous_variant 0.21
kasA 2519236 c.1122G>A synonymous_variant 0.18
kasA 2519239 c.1125A>C synonymous_variant 0.22
ahpC 2726561 c.369T>C synonymous_variant 0.19
ahpC 2726570 c.378C>T synonymous_variant 0.17
ahpC 2726582 c.390G>T synonymous_variant 0.29
ahpC 2726591 c.399C>G synonymous_variant 0.27
ahpC 2726593 p.Val134Ala missense_variant 0.26
ahpC 2726600 c.408T>C synonymous_variant 0.3
ahpC 2726601 p.Ile137Leu missense_variant 0.3
ahpC 2726633 c.441C>T synonymous_variant 0.34
ahpC 2726638 p.Ala149Val missense_variant 0.34
ahpC 2726645 c.453C>G synonymous_variant 0.32
ahpC 2726657 c.465A>C synonymous_variant 0.29
ahpC 2726669 p.Asp159Glu missense_variant 0.24
ahpC 2726672 c.480G>A synonymous_variant 0.24
ahpC 2726675 c.483A>G synonymous_variant 0.26
ahpC 2726681 c.489A>C synonymous_variant 0.26
ahpC 2726693 c.501C>A synonymous_variant 0.29
ahpC 2726696 c.504C>G synonymous_variant 0.29
ahpC 2726717 c.525A>G synonymous_variant 0.27
folC 2746594 c.1005T>C synonymous_variant 0.21
folC 2746599 p.Thr334Ala missense_variant 0.22
folC 2746609 c.990T>C synonymous_variant 0.23
folC 2746612 c.987C>T synonymous_variant 0.23
folC 2746615 c.984C>G synonymous_variant 0.23
folC 2746618 c.981G>C synonymous_variant 0.24
folC 2746621 c.978C>T synonymous_variant 0.24
folC 2746624 c.975C>G synonymous_variant 0.24
folC 2746627 p.Asp324Glu missense_variant 0.24
folC 2746631 p.Gly323Val missense_variant 0.24
folC 2746651 c.948T>C synonymous_variant 0.24
folC 2746657 c.942T>C synonymous_variant 0.23
folC 2746663 c.936T>C synonymous_variant 0.22
folC 2746666 c.933C>G synonymous_variant 0.22
folC 2746677 p.Ser308Ala missense_variant 0.2
folC 2746684 c.915C>G synonymous_variant 0.18
folC 2746714 c.885T>A synonymous_variant 0.24
folC 2746939 c.660C>T synonymous_variant 0.17
folC 2746948 c.651G>C synonymous_variant 0.22
folC 2746954 c.645G>A synonymous_variant 0.24
folC 2746966 c.633G>C synonymous_variant 0.28
folC 2746974 p.Ile209Leu missense_variant 0.31
folC 2746975 c.624T>C synonymous_variant 0.31
folC 2746979 p.Ala207Asp missense_variant 0.31
folC 2746981 c.618T>C synonymous_variant 0.31
folC 2746987 c.612T>C synonymous_variant 0.33
folC 2746999 c.600T>C synonymous_variant 0.35
folC 2747002 c.597T>C synonymous_variant 0.33
folC 2747006 p.Ser198Ala missense_variant 0.32
folC 2747021 p.Val193Ala missense_variant 0.44
folC 2747023 c.576C>G synonymous_variant 0.44
folC 2747026 c.573C>G synonymous_variant 0.43
folC 2747032 c.567A>C synonymous_variant 0.44
folC 2747059 c.540T>C synonymous_variant 0.42
folC 2747071 c.528C>G synonymous_variant 0.34
folC 2747077 c.522G>A synonymous_variant 0.32
folC 2747086 c.513A>C synonymous_variant 0.23
folC 2747089 c.510G>C synonymous_variant 0.23
folC 2747101 c.498G>C synonymous_variant 0.23
folC 2747266 c.333C>T synonymous_variant 0.17
folC 2747314 c.285A>C synonymous_variant 0.24
folC 2747317 c.282C>G synonymous_variant 0.23
folC 2747343 p.Val86Ile missense_variant 0.29
folC 2747355 p.Val82Ile missense_variant 0.29
folC 2747359 c.240C>G synonymous_variant 0.3
folC 2747362 c.237G>C synonymous_variant 0.32
folC 2747394 p.Ile69Val missense_variant 0.25
folC 2747407 c.192T>C synonymous_variant 0.22
folC 2747414 c.180_184delCCAAC frameshift_variant 0.21
folC 2747422 c.177G>A synonymous_variant 0.21
folC 2747434 c.165C>T synonymous_variant 0.24
folC 2747442 c.157T>C synonymous_variant 0.24
folC 2747443 c.156G>C synonymous_variant 0.24
pepQ 2859857 p.Val188Met missense_variant 0.17
Rv2752c 3064838 c.1354T>C synonymous_variant 0.22
Rv2752c 3064860 c.1332G>C synonymous_variant 0.27
Rv2752c 3064872 c.1320T>G synonymous_variant 0.26
Rv2752c 3064877 p.Ser439Ala missense_variant 0.23
Rv2752c 3064887 c.1305A>G synonymous_variant 0.23
Rv2752c 3064896 c.1296T>C synonymous_variant 0.29
Rv2752c 3064914 c.1278T>G synonymous_variant 0.42
Rv2752c 3064928 c.1264T>C synonymous_variant 0.44
Rv2752c 3064932 c.1260T>C synonymous_variant 0.41
Rv2752c 3064935 c.1257A>G synonymous_variant 0.41
Rv2752c 3064941 p.Gln417Glu missense_variant 0.4
Rv2752c 3064947 c.1245A>G synonymous_variant 0.4
Rv2752c 3064956 p.Ser412Arg missense_variant 0.41
Rv2752c 3064962 c.1230C>G synonymous_variant 0.43
Rv2752c 3064973 p.Ala407Ser missense_variant 0.37
Rv2752c 3064974 c.1218T>C synonymous_variant 0.38
Rv2752c 3064995 c.1197C>G synonymous_variant 0.38
Rv2752c 3064998 c.1194A>G synonymous_variant 0.4
Rv2752c 3065007 c.1185G>C synonymous_variant 0.38
Rv2752c 3065013 c.1179G>C synonymous_variant 0.36
Rv2752c 3065016 p.Asn392His missense_variant 0.36
Rv2752c 3065022 c.1170G>T synonymous_variant 0.38
Rv2752c 3065028 p.Val388Ile missense_variant 0.38
Rv2752c 3065040 c.1152C>G synonymous_variant 0.35
Rv2752c 3065052 c.1140G>A synonymous_variant 0.3
Rv2752c 3065055 c.1137T>C synonymous_variant 0.26
Rv2752c 3065126 p.Ser356Ala missense_variant 0.21
Rv2752c 3065127 c.1065G>C synonymous_variant 0.21
Rv2752c 3065131 p.Ala354Glu missense_variant 0.19
Rv2752c 3065133 c.1059T>C synonymous_variant 0.19
Rv2752c 3065142 c.1050A>C synonymous_variant 0.24
Rv2752c 3065146 p.Phe349Tyr missense_variant 0.26
Rv2752c 3065151 c.1041G>C synonymous_variant 0.26
Rv2752c 3065166 c.1026C>G synonymous_variant 0.19
Rv2752c 3065397 c.795G>C synonymous_variant 0.21
Rv2752c 3065400 c.792A>C synonymous_variant 0.22
Rv2752c 3065418 c.774A>G synonymous_variant 0.34
Rv2752c 3065421 c.771G>C synonymous_variant 0.35
Rv2752c 3065451 c.741G>A synonymous_variant 0.3
Rv2752c 3065457 c.735A>C synonymous_variant 0.29
Rv2752c 3065460 c.732G>T synonymous_variant 0.29
Rv2752c 3065463 c.729T>C synonymous_variant 0.29
Rv2752c 3065481 c.711T>C synonymous_variant 0.31
Rv2752c 3065487 c.705T>G synonymous_variant 0.31
Rv2752c 3065490 c.702A>C synonymous_variant 0.32
Rv2752c 3065493 c.699G>C synonymous_variant 0.32
Rv2752c 3065496 c.696G>C synonymous_variant 0.32
Rv2752c 3065499 c.693A>C synonymous_variant 0.31
Rv2752c 3065508 c.684T>C synonymous_variant 0.31
Rv2752c 3065511 c.681G>C synonymous_variant 0.31
Rv2752c 3065517 c.675C>G synonymous_variant 0.31
Rv2752c 3065520 c.672G>C synonymous_variant 0.31
Rv2752c 3065532 c.660A>G synonymous_variant 0.26
Rv2752c 3065535 c.657C>T synonymous_variant 0.23
Rv2752c 3065547 c.645A>G synonymous_variant 0.22
Rv2752c 3065589 c.603C>T synonymous_variant 0.17
Rv2752c 3065595 p.Leu199Phe missense_variant 0.21
Rv2752c 3065607 c.585C>G synonymous_variant 0.23
Rv2752c 3065612 p.Thr194Ala missense_variant 0.23
Rv2752c 3065616 c.576C>G synonymous_variant 0.24
Rv2752c 3065622 c.570G>C synonymous_variant 0.23
Rv2752c 3065625 c.567G>C synonymous_variant 0.23
Rv2752c 3065634 c.558G>C synonymous_variant 0.26
Rv2752c 3065637 c.555A>G synonymous_variant 0.26
Rv2752c 3065640 c.552T>C synonymous_variant 0.26
Rv2752c 3065646 c.546C>G synonymous_variant 0.25
Rv2752c 3065649 c.543T>G synonymous_variant 0.26
Rv2752c 3065659 p.Pro178Leu missense_variant 0.28
Rv2752c 3065661 c.531A>G synonymous_variant 0.25
Rv2752c 3065664 c.526_528delTTGinsCTT synonymous_variant 0.24
Rv2752c 3065667 c.525A>G synonymous_variant 0.24
Rv2752c 3065675 p.Phe173Leu missense_variant 0.24
Rv2752c 3065676 c.516G>A synonymous_variant 0.24
Rv2752c 3065697 c.495C>T synonymous_variant 0.24
Rv2752c 3065700 c.492C>G synonymous_variant 0.26
Rv2752c 3065717 p.Tyr159His missense_variant 0.24
Rv2752c 3065721 c.471G>C synonymous_variant 0.26
Rv2752c 3065727 c.465C>G synonymous_variant 0.21
Rv2752c 3065957 c.235T>C synonymous_variant 0.23
Rv2752c 3065979 c.213T>C synonymous_variant 0.27
Rv2752c 3065985 c.207C>T synonymous_variant 0.3
Rv2752c 3065988 c.204A>G synonymous_variant 0.28
Rv2752c 3065993 p.Val67Ile missense_variant 0.29
Rv2752c 3066002 p.Met64Leu missense_variant 0.33
Rv2752c 3066003 c.189C>T synonymous_variant 0.32
Rv2752c 3066009 c.183G>C synonymous_variant 0.34
Rv2752c 3066018 c.174T>C synonymous_variant 0.41
Rv2752c 3066024 c.168T>G synonymous_variant 0.42
Rv2752c 3066040 p.Gly51Thr missense_variant 0.35
Rv2752c 3066042 c.150T>C synonymous_variant 0.36
Rv2752c 3066050 p.Leu48Met missense_variant 0.45
Rv2752c 3066054 c.138T>G synonymous_variant 0.48
Rv2752c 3066066 c.126T>C synonymous_variant 0.43
Rv2752c 3066069 c.121_123delTTGinsCTC synonymous_variant 0.43
Rv2752c 3066075 c.117A>G synonymous_variant 0.41
Rv2752c 3066087 c.105A>G synonymous_variant 0.35
Rv2752c 3066090 p.Phe34Leu missense_variant 0.33
Rv2752c 3066118 p.Asn25Ser missense_variant 0.21
thyX 3067316 c.630A>G synonymous_variant 0.19
thyX 3067325 c.621A>G synonymous_variant 0.21
thyX 3067349 c.597G>C synonymous_variant 0.26
thyX 3067355 c.591A>C synonymous_variant 0.27
thyX 3067367 c.579G>C synonymous_variant 0.29
thyX 3067391 c.555G>C synonymous_variant 0.27
thyX 3067394 c.552G>C synonymous_variant 0.3
thyX 3067439 c.507A>G synonymous_variant 0.23
thyX 3067445 c.501C>G synonymous_variant 0.22
thyX 3067457 c.489C>G synonymous_variant 0.21
thyX 3067462 c.484C>T synonymous_variant 0.21
thyX 3067463 p.Ile161Val missense_variant 0.22
thyX 3067472 c.474C>G synonymous_variant 0.22
thyX 3067475 c.471A>G synonymous_variant 0.23
thyX 3067487 c.459G>A synonymous_variant 0.19
thyX 3067490 c.456C>G synonymous_variant 0.19
thyX 3067661 c.285C>G synonymous_variant 0.19
thyX 3067682 c.264G>A synonymous_variant 0.18
thyX 3067715 c.231C>T synonymous_variant 0.23
thyX 3067718 c.228C>G synonymous_variant 0.22
thyX 3067721 c.225T>C synonymous_variant 0.21
thyX 3067727 c.219A>C synonymous_variant 0.21
thyX 3067736 c.210C>T synonymous_variant 0.2
thyX 3067765 p.Leu61Ile missense_variant 0.16
thyX 3067781 c.165C>G synonymous_variant 0.21
thyX 3067799 c.147G>A synonymous_variant 0.22
thyX 3067802 c.144C>G synonymous_variant 0.23
thyX 3067811 c.135G>A synonymous_variant 0.26
thyX 3067814 c.132T>C synonymous_variant 0.26
thyX 3067850 c.96A>C synonymous_variant 0.24
thyX 3067869 p.Thr26Ser missense_variant 0.27
thyX 3067874 c.72C>G synonymous_variant 0.29
thyX 3067883 c.63C>G synonymous_variant 0.29
thyX 3067886 c.60A>C synonymous_variant 0.26
thyX 3067889 c.57C>G synonymous_variant 0.27
thyX 3067898 p.Asp16Glu missense_variant 0.27
thyX 3067935 p.Thr4Ile missense_variant 0.18
thyA 3073868 p.Thr202Ala missense_variant 0.86
thyA 3073953 c.519T>C synonymous_variant 0.24
thyA 3073977 c.495A>G synonymous_variant 0.25
thyA 3073989 c.483T>C synonymous_variant 0.24
thyA 3074053 p.Arg140Gln missense_variant 0.2
thyA 3074056 p.Glu139Pro missense_variant 0.21
thyA 3074061 c.411A>G synonymous_variant 0.23
thyA 3074064 c.408C>T synonymous_variant 0.23
thyA 3074076 c.396C>T synonymous_variant 0.22
thyA 3074079 c.393G>C synonymous_variant 0.2
thyA 3074100 p.Asp124Asn missense_variant 0.18
thyA 3074106 c.366T>C synonymous_variant 0.2
thyA 3074358 c.112_114delTTGinsCTT synonymous_variant 0.21
thyA 3074361 c.111T>C synonymous_variant 0.21
thyA 3074372 p.Met34Leu missense_variant 0.23
thyA 3074379 c.93C>T synonymous_variant 0.21
thyA 3074391 c.81C>A synonymous_variant 0.27
thyA 3074412 c.60C>T synonymous_variant 0.21
thyA 3074427 c.45T>A synonymous_variant 0.19
thyA 3074433 p.Glu13Asp missense_variant 0.18
thyA 3074477 c.-6T>C upstream_gene_variant 0.19
ald 3086788 c.-32T>C upstream_gene_variant 1.0
Rv3083 3448937 p.Tyr145Cys missense_variant 0.9
fprA 3473809 c.-198G>C upstream_gene_variant 0.19
fprA 3473812 c.-195G>A upstream_gene_variant 0.19
fprA 3473818 c.-189C>G upstream_gene_variant 0.19
fprA 3473843 c.-164C>G upstream_gene_variant 0.18
fprA 3473996 c.-11_-10insA upstream_gene_variant 1.0
fprA 3474064 p.Ala20Ser missense_variant 0.17
fprA 3474088 p.Thr28Ala missense_variant 0.22
fprA 3474105 c.99C>T synonymous_variant 0.2
fprA 3474108 p.Met34Ile missense_variant 0.21
fprA 3474114 c.108C>T synonymous_variant 0.23
fprA 3474130 c.124_126delTTGinsCTT synonymous_variant 0.22
fprA 3474135 c.129G>C synonymous_variant 0.23
fprA 3474138 c.132T>C synonymous_variant 0.24
fprA 3474141 c.135C>G synonymous_variant 0.23
fprA 3474156 c.150C>T synonymous_variant 0.29
fprA 3474162 c.156G>C synonymous_variant 0.29
fprA 3474171 c.165G>C synonymous_variant 0.31
fprA 3474180 c.174C>G synonymous_variant 0.27
fprA 3474183 c.177G>A synonymous_variant 0.27
fprA 3474210 c.204A>G synonymous_variant 0.23
fprA 3474220 p.Glu72Gln missense_variant 0.22
fprA 3474225 c.219C>T synonymous_variant 0.19
Rv3236c 3612009 p.Ala370Thr missense_variant 0.89
Rv3236c 3612303 p.Thr272Ala missense_variant 0.22
Rv3236c 3612313 c.804C>T synonymous_variant 0.19
Rv3236c 3612325 p.Thr264Ser missense_variant 0.22
Rv3236c 3612335 p.Met261Gln missense_variant 0.22
Rv3236c 3612340 c.777A>C synonymous_variant 0.26
Rv3236c 3612346 p.Asp257Glu missense_variant 0.25
Rv3236c 3612349 c.768A>C synonymous_variant 0.26
Rv3236c 3612364 c.753T>G synonymous_variant 0.21
Rv3236c 3612367 c.750G>C synonymous_variant 0.21
Rv3236c 3612370 c.747C>G synonymous_variant 0.21
Rv3236c 3612376 c.741A>G synonymous_variant 0.21
Rv3236c 3612382 c.735T>C synonymous_variant 0.21
Rv3236c 3612388 c.729T>C synonymous_variant 0.24
Rv3236c 3612394 c.723T>G synonymous_variant 0.21
Rv3236c 3612397 c.720G>C synonymous_variant 0.21
Rv3236c 3612403 c.714G>C synonymous_variant 0.22
Rv3236c 3612423 p.Val232Leu missense_variant 0.21
Rv3236c 3612695 p.Arg141His missense_variant 0.17
Rv3236c 3612715 c.402G>C synonymous_variant 0.19
Rv3236c 3612721 c.396G>C synonymous_variant 0.19
Rv3236c 3612724 c.393T>C synonymous_variant 0.2
Rv3236c 3612730 c.387C>G synonymous_variant 0.19
Rv3236c 3612736 c.381T>C synonymous_variant 0.19
Rv3236c 3612748 c.369G>C synonymous_variant 0.2
fbiA 3640850 p.Glu103Gly missense_variant 0.19
fbiB 3640857 c.-678G>C upstream_gene_variant 0.18
fbiB 3640866 c.-669T>C upstream_gene_variant 0.19
fbiA 3640871 p.Ala110Gly missense_variant 0.19
fbiB 3640893 c.-642G>A upstream_gene_variant 0.21
fbiB 3640899 c.-636G>C upstream_gene_variant 0.22
fbiA 3640900 p.Gln120Asn missense_variant 0.24
fbiB 3640914 c.-621C>G upstream_gene_variant 0.29
fbiB 3640920 c.-615A>T upstream_gene_variant 0.3
fbiA 3640931 p.Glu130Ala missense_variant 0.28
fbiB 3640935 c.-600C>G upstream_gene_variant 0.21
fbiB 3640938 c.-597A>G upstream_gene_variant 0.19
fbiB 3642542 c.1008A>G synonymous_variant 0.18
fbiB 3642560 c.1026T>C synonymous_variant 0.28
fbiB 3642566 c.1032A>C synonymous_variant 0.27
fbiB 3642572 c.1038A>G synonymous_variant 0.29
fbiB 3642581 c.1047A>C synonymous_variant 0.32
fbiB 3642587 p.Met351Ile missense_variant 0.33
fbiB 3642596 c.1062C>G synonymous_variant 0.33
fbiB 3642602 c.1068A>C synonymous_variant 0.32
fbiB 3642605 c.1071A>C synonymous_variant 0.31
fbiB 3642609 c.1075_1076delAGinsTC synonymous_variant 0.31
fbiB 3642620 c.1086T>C synonymous_variant 0.31
fbiB 3642656 c.1122G>C synonymous_variant 0.2
fbiB 3642662 c.1128C>G synonymous_variant 0.21
fbiB 3642668 c.1134A>G synonymous_variant 0.22
fbiB 3642677 c.1143A>G synonymous_variant 0.2
fbiB 3642680 c.1146A>G synonymous_variant 0.21
fbiB 3642684 c.1150T>C synonymous_variant 0.21
alr 3840944 c.477T>C synonymous_variant 0.25
alr 3840947 c.474G>C synonymous_variant 0.28
alr 3840959 c.462G>C synonymous_variant 0.31
alr 3840962 c.459G>C synonymous_variant 0.31
alr 3840968 c.453G>C synonymous_variant 0.3
alr 3840977 c.444C>G synonymous_variant 0.27
alr 3840980 c.441G>C synonymous_variant 0.27
alr 3840994 p.His143Asp missense_variant 0.33
alr 3840997 c.424T>C synonymous_variant 0.33
alr 3841001 c.420A>G synonymous_variant 0.34
alr 3841010 c.411A>G synonymous_variant 0.33
alr 3841017 p.Leu135Glu missense_variant 0.32
alr 3841022 c.399C>G synonymous_variant 0.31
alr 3841028 c.393G>C synonymous_variant 0.31
alr 3841033 p.Val130Ile missense_variant 0.31
alr 3841037 p.Val128Ile missense_variant 0.3
alr 3841059 p.Gly121Ala missense_variant 0.3
alr 3841079 c.342T>C synonymous_variant 0.29
alr 3841088 c.333C>A synonymous_variant 0.25
rpoA 3877482 c.1026C>G synonymous_variant 0.22
rpoA 3877488 c.1020C>T synonymous_variant 0.27
rpoA 3877494 p.Glu338Asp missense_variant 0.24
rpoA 3877503 c.1005G>C synonymous_variant 0.29
rpoA 3877507 p.Gly334Ala missense_variant 0.25
rpoA 3877515 c.993G>C synonymous_variant 0.28
rpoA 3877553 p.Glu319Gln missense_variant 0.33
rpoA 3877560 c.948C>T synonymous_variant 0.38
rpoA 3877571 p.Pro313Ala missense_variant 0.39
rpoA 3877587 c.921A>G synonymous_variant 0.46
rpoA 3877593 c.915C>T synonymous_variant 0.49
rpoA 3877613 p.Ile299Val missense_variant 0.52
rpoA 3877656 c.852T>G synonymous_variant 0.55
rpoA 3877668 c.840A>G synonymous_variant 0.57
rpoA 3877679 p.Ala277Ser missense_variant 0.57
rpoA 3877686 c.822A>G synonymous_variant 0.56
rpoA 3877692 c.816G>C synonymous_variant 0.55
rpoA 3877704 c.804G>T synonymous_variant 0.55
rpoA 3877743 c.765T>C synonymous_variant 0.53
rpoA 3877764 c.744C>G synonymous_variant 0.54
rpoA 3877770 c.738A>G synonymous_variant 0.52
rpoA 3877776 c.732T>C synonymous_variant 0.53
rpoA 3877782 c.726T>C synonymous_variant 0.55
rpoA 3877791 c.717C>G synonymous_variant 0.51
rpoA 3877794 c.714G>C synonymous_variant 0.53
rpoA 3877818 c.690A>G synonymous_variant 0.56
rpoA 3877839 c.669G>C synonymous_variant 0.62
rpoA 3877848 c.660C>T synonymous_variant 0.61
rpoA 3877857 c.651G>A synonymous_variant 0.58
rpoA 3877872 c.636C>T synonymous_variant 0.56
rpoA 3877875 c.633T>G synonymous_variant 0.54
rpoA 3877881 c.627G>A synonymous_variant 0.5
rpoA 3877896 c.612G>C synonymous_variant 0.46
rpoA 3877900 p.Ser203Asn missense_variant 0.46
rpoA 3877905 c.603A>G synonymous_variant 0.46
rpoA 3877908 p.Asn200Ser missense_variant 0.44
rpoA 3877920 c.588G>C synonymous_variant 0.47
rpoA 3877926 c.582G>C synonymous_variant 0.44
rpoA 3877962 c.546G>T synonymous_variant 0.31
rpoA 3877989 c.519A>G synonymous_variant 0.26
rpoA 3878001 c.507A>G synonymous_variant 0.26
rpoA 3878022 c.486T>C synonymous_variant 0.25
rpoA 3878028 c.480G>C synonymous_variant 0.24
rpoA 3878031 c.477T>C synonymous_variant 0.25
rpoA 3878034 c.474A>G synonymous_variant 0.25
rpoA 3878040 c.468T>C synonymous_variant 0.24
rpoA 3878043 c.465G>T synonymous_variant 0.25
rpoA 3878046 c.462T>A synonymous_variant 0.23
rpoA 3878055 c.453A>G synonymous_variant 0.23
rpoA 3878061 c.447G>C synonymous_variant 0.23
rpoA 3878067 c.441C>G synonymous_variant 0.24
rpoA 3878070 c.438T>C synonymous_variant 0.23
rpoA 3878076 c.432C>T synonymous_variant 0.24
rpoA 3878094 c.414C>G synonymous_variant 0.32
rpoA 3878103 c.405A>G synonymous_variant 0.32
rpoA 3878106 c.402G>C synonymous_variant 0.35
rpoA 3878118 c.390T>C synonymous_variant 0.39
rpoA 3878130 c.378C>G synonymous_variant 0.37
rpoA 3878141 p.Met123Leu missense_variant 0.38
rpoA 3878143 p.Gly122Asp missense_variant 0.39
rpoA 3878157 c.351C>G synonymous_variant 0.38
rpoA 3878169 c.339G>C synonymous_variant 0.41
rpoA 3878172 c.336G>C synonymous_variant 0.42
rpoA 3878175 c.333G>T synonymous_variant 0.43
rpoA 3878184 c.324C>T synonymous_variant 0.43
rpoA 3878187 c.321C>G synonymous_variant 0.46
rpoA 3878193 c.315T>C synonymous_variant 0.49
rpoA 3878199 c.309T>C synonymous_variant 0.47
rpoA 3878205 c.303T>C synonymous_variant 0.46
rpoA 3878217 c.291A>G synonymous_variant 0.44
rpoA 3878226 c.282C>G synonymous_variant 0.43
rpoA 3878247 c.261G>C synonymous_variant 0.38
rpoA 3878256 c.252G>C synonymous_variant 0.33
rpoA 3878271 c.237T>C synonymous_variant 0.31
rpoA 3878276 c.232C>T synonymous_variant 0.26
rpoA 3878283 p.Glu75Ala missense_variant 0.24
rpoA 3878292 c.216T>C synonymous_variant 0.24
rpoA 3878301 c.207C>G synonymous_variant 0.26
rpoA 3878304 c.204G>C synonymous_variant 0.26
rpoA 3878313 c.195G>C synonymous_variant 0.24
rpoA 3878322 c.186A>G synonymous_variant 0.22
rpoA 3878331 c.177A>G synonymous_variant 0.26
rpoA 3878337 c.171T>C synonymous_variant 0.19
rpoA 3878364 c.144A>C synonymous_variant 0.23
rpoA 3878367 c.141C>G synonymous_variant 0.25
rpoA 3878376 c.132G>C synonymous_variant 0.3
rpoA 3878385 c.123C>G synonymous_variant 0.3
rpoA 3878388 c.120C>G synonymous_variant 0.3
rpoA 3878391 c.117T>C synonymous_variant 0.3
rpoA 3878396 c.112C>T synonymous_variant 0.3
rpoA 3878415 c.93C>T synonymous_variant 0.29
rpoA 3878436 c.72A>G synonymous_variant 0.28
rpoA 3878442 c.66G>C synonymous_variant 0.28
rpoA 3878454 c.54A>C synonymous_variant 0.26
rpoA 3878460 c.48C>T synonymous_variant 0.24
rpoA 3878475 c.33G>A synonymous_variant 0.21
rpoA 3878490 c.18C>A synonymous_variant 0.21
rpoA 3878496 c.12A>T synonymous_variant 0.22
ddn 3986645 c.-199G>A upstream_gene_variant 0.27
ddn 3986665 c.-179G>C upstream_gene_variant 0.23
ddn 3986667 c.-177_-176delCTinsAC upstream_gene_variant 0.24
ddn 3986681 c.-163C>G upstream_gene_variant 0.22
clpC1 4038255 p.Val817Lys missense_variant 0.19
clpC1 4038271 p.Pro812Ala missense_variant 0.23
clpC1 4038274 p.Gly811Ser missense_variant 0.23
clpC1 4038275 c.2430A>G synonymous_variant 0.23
clpC1 4038278 c.2427T>C synonymous_variant 0.23
clpC1 4038287 c.2418C>T synonymous_variant 0.6
clpC1 4038293 c.2412G>A synonymous_variant 0.27
clpC1 4038296 c.2409C>T synonymous_variant 0.28
clpC1 4038302 c.2403C>G synonymous_variant 0.27
clpC1 4038308 c.2397G>C synonymous_variant 0.27
clpC1 4038314 c.2391T>C synonymous_variant 0.3
clpC1 4038317 c.2388G>C synonymous_variant 0.26
clpC1 4038320 c.2385G>A synonymous_variant 0.26
clpC1 4038347 c.2358G>C synonymous_variant 0.28
clpC1 4038356 c.2349T>C synonymous_variant 0.24
clpC1 4038359 c.2346A>G synonymous_variant 0.28
clpC1 4038368 c.2337T>C synonymous_variant 0.3
clpC1 4038388 c.2317T>C synonymous_variant 0.31
clpC1 4038392 c.2313C>T synonymous_variant 0.29
clpC1 4038398 c.2307G>T synonymous_variant 0.26
clpC1 4038403 c.2302T>C synonymous_variant 0.26
clpC1 4038407 c.2298G>C synonymous_variant 0.26
clpC1 4038419 c.2286T>C synonymous_variant 0.27
clpC1 4038433 c.2272C>T synonymous_variant 0.22
clpC1 4038434 c.2271G>A synonymous_variant 0.23
clpC1 4038444 p.Ala754Lys missense_variant 0.19
clpC1 4038446 c.2259T>C synonymous_variant 0.19
clpC1 4038456 p.Val750Glu missense_variant 0.2
clpC1 4038458 c.2247G>C synonymous_variant 0.2
clpC1 4038486 p.Gly740Thr missense_variant 0.22
clpC1 4038498 p.Ser736Thr missense_variant 0.24
clpC1 4038596 c.2109A>G synonymous_variant 0.24
clpC1 4038640 p.Asp689Asn missense_variant 0.17
clpC1 4038671 c.2034T>C synonymous_variant 0.18
clpC1 4038683 c.2022T>C synonymous_variant 0.22
clpC1 4038692 c.2013C>G synonymous_variant 0.21
clpC1 4038695 c.2010C>G synonymous_variant 0.24
clpC1 4038701 c.2004G>C synonymous_variant 0.21
clpC1 4038704 c.2001T>C synonymous_variant 0.21
clpC1 4038707 c.1998C>G synonymous_variant 0.21
clpC1 4038710 c.1995G>T synonymous_variant 0.21
clpC1 4038713 c.1992T>C synonymous_variant 0.21
clpC1 4038755 c.1950G>T synonymous_variant 0.18
clpC1 4038770 c.1935C>T synonymous_variant 0.22
clpC1 4038773 c.1932T>C synonymous_variant 0.23
clpC1 4038779 c.1926C>T synonymous_variant 0.23
clpC1 4038782 c.1923G>C synonymous_variant 0.21
clpC1 4038790 c.1915C>T synonymous_variant 0.21
clpC1 4038812 c.1893T>C synonymous_variant 0.24
clpC1 4038815 c.1890G>A synonymous_variant 0.26
clpC1 4038845 c.1860G>C synonymous_variant 0.38
clpC1 4038860 c.1845G>C synonymous_variant 0.42
clpC1 4038878 c.1827A>G synonymous_variant 0.43
clpC1 4038908 c.1797C>G synonymous_variant 0.39
clpC1 4038914 c.1791G>C synonymous_variant 0.38
clpC1 4038923 c.1780_1782delCTAinsTTG synonymous_variant 0.41
clpC1 4038953 c.1752A>G synonymous_variant 0.47
clpC1 4038956 c.1749T>C synonymous_variant 0.46
clpC1 4038965 c.1740T>C synonymous_variant 0.44
clpC1 4038971 c.1734T>C synonymous_variant 0.43
clpC1 4038974 c.1731T>C synonymous_variant 0.41
clpC1 4038989 c.1716T>C synonymous_variant 0.47
clpC1 4038997 c.1708T>C synonymous_variant 0.45
clpC1 4039022 c.1683A>G synonymous_variant 0.43
clpC1 4039043 c.1662G>T synonymous_variant 0.4
clpC1 4039064 c.1641C>T synonymous_variant 0.43
clpC1 4039085 c.1620A>G synonymous_variant 0.44
clpC1 4039097 c.1608G>C synonymous_variant 0.43
clpC1 4039103 c.1602T>C synonymous_variant 0.44
clpC1 4039106 c.1599G>C synonymous_variant 0.44
clpC1 4039112 c.1593C>G synonymous_variant 0.44
clpC1 4039121 c.1584T>C synonymous_variant 0.43
clpC1 4039142 c.1563A>G synonymous_variant 0.37
clpC1 4039145 c.1560G>C synonymous_variant 0.36
clpC1 4039169 p.Glu512Asp missense_variant 0.36
clpC1 4039172 c.1533A>G synonymous_variant 0.36
clpC1 4039178 c.1527G>C synonymous_variant 0.35
clpC1 4039183 c.1522T>C synonymous_variant 0.35
clpC1 4039186 c.1519C>T synonymous_variant 0.37
clpC1 4039193 c.1512C>G synonymous_variant 0.38
clpC1 4039208 c.1497C>G synonymous_variant 0.32
clpC1 4039226 c.1479T>C synonymous_variant 0.34
clpC1 4039274 c.1431G>C synonymous_variant 0.39
clpC1 4039286 c.1419T>C synonymous_variant 0.39
clpC1 4039298 c.1407T>C synonymous_variant 0.42
clpC1 4039319 c.1386T>C synonymous_variant 0.42
clpC1 4039328 c.1377A>C synonymous_variant 0.41
clpC1 4039331 c.1374C>G synonymous_variant 0.39
clpC1 4039337 p.Thr456Gln missense_variant 0.38
clpC1 4039349 c.1356C>T synonymous_variant 0.39
clpC1 4039352 c.1353C>G synonymous_variant 0.39
clpC1 4039364 c.1341C>G synonymous_variant 0.39
clpC1 4039391 c.1314T>G synonymous_variant 0.37
clpC1 4039406 c.1299G>C synonymous_variant 0.32
clpC1 4039409 c.1296T>C synonymous_variant 0.31
clpC1 4039412 c.1293T>G synonymous_variant 0.31
clpC1 4039415 p.Glu430Asp missense_variant 0.31
clpC1 4039430 c.1275T>C synonymous_variant 0.35
clpC1 4039442 c.1263A>G synonymous_variant 0.29
clpC1 4039454 c.1251A>T synonymous_variant 0.26
clpC1 4039463 c.1242C>G synonymous_variant 0.25
clpC1 4039466 c.1239T>C synonymous_variant 0.25
clpC1 4039469 c.1236T>C synonymous_variant 0.25
clpC1 4039481 c.1224T>C synonymous_variant 0.22
clpC1 4039484 c.1221T>C synonymous_variant 0.23
clpC1 4039487 c.1218G>C synonymous_variant 0.26
clpC1 4039517 c.1188C>G synonymous_variant 0.32
clpC1 4039556 c.1149G>C synonymous_variant 0.32
clpC1 4039559 c.1146C>G synonymous_variant 0.32
clpC1 4039562 c.1143C>G synonymous_variant 0.32
clpC1 4039565 c.1140G>C synonymous_variant 0.33
clpC1 4039570 p.Met379Leu missense_variant 0.33
clpC1 4039576 p.Ala377Pro missense_variant 0.35
clpC1 4039577 c.1128T>C synonymous_variant 0.36
clpC1 4039589 c.1116G>T synonymous_variant 0.41
clpC1 4039610 c.1095G>T synonymous_variant 0.42
clpC1 4039616 c.1089G>C synonymous_variant 0.42
clpC1 4039661 c.1044T>G synonymous_variant 0.41
clpC1 4039664 c.1041G>C synonymous_variant 0.41
clpC1 4039694 c.1011G>C synonymous_variant 0.33
clpC1 4039724 c.981A>G synonymous_variant 0.32
clpC1 4039751 c.954A>G synonymous_variant 0.26
clpC1 4039756 c.949C>T synonymous_variant 0.24
clpC1 4039757 c.948A>G synonymous_variant 0.24
clpC1 4039760 c.945T>C synonymous_variant 0.24
clpC1 4039766 c.939T>C synonymous_variant 0.23
clpC1 4039769 c.936C>G synonymous_variant 0.23
clpC1 4039775 c.930G>C synonymous_variant 0.24
clpC1 4039778 c.927A>G synonymous_variant 0.23
clpC1 4039781 c.924G>C synonymous_variant 0.23
clpC1 4039790 c.915C>G synonymous_variant 0.26
clpC1 4039817 c.888A>T synonymous_variant 0.25
clpC1 4039820 c.885T>C synonymous_variant 0.24
clpC1 4039826 c.879C>G synonymous_variant 0.27
clpC1 4039831 c.874T>C synonymous_variant 0.27
clpC1 4039850 c.855T>C synonymous_variant 0.28
clpC1 4039865 c.840T>C synonymous_variant 0.26
clpC1 4039898 c.807C>G synonymous_variant 0.26
clpC1 4039904 c.801A>G synonymous_variant 0.27
clpC1 4039931 c.774T>C synonymous_variant 0.23
clpC1 4039937 c.768G>C synonymous_variant 0.25
clpC1 4039946 c.759A>T synonymous_variant 0.25
clpC1 4039952 c.753T>C synonymous_variant 0.28
clpC1 4039964 c.741C>T synonymous_variant 0.3
clpC1 4039979 c.726C>T synonymous_variant 0.33
clpC1 4039991 c.714G>C synonymous_variant 0.34
clpC1 4040021 c.684A>C synonymous_variant 0.3
clpC1 4040024 c.681A>G synonymous_variant 0.31
clpC1 4040033 c.672G>C synonymous_variant 0.34
clpC1 4040087 c.618G>T synonymous_variant 0.33
clpC1 4040090 c.615T>C synonymous_variant 0.33
clpC1 4040105 c.600C>G synonymous_variant 0.3
clpC1 4040147 c.558A>G synonymous_variant 0.35
clpC1 4040162 c.543G>C synonymous_variant 0.38
clpC1 4040165 c.540G>C synonymous_variant 0.41
clpC1 4040171 c.534C>G synonymous_variant 0.41
clpC1 4040201 c.504C>G synonymous_variant 0.3
clpC1 4040207 c.498T>G synonymous_variant 0.28
clpC1 4040213 c.490_492delTCTinsAGC synonymous_variant 0.23
clpC1 4040225 c.480A>C synonymous_variant 0.24
clpC1 4040228 c.477G>C synonymous_variant 0.25
clpC1 4040231 c.474C>T synonymous_variant 0.25
clpC1 4040237 c.468C>T synonymous_variant 0.25
clpC1 4040246 c.459C>G synonymous_variant 0.26
clpC1 4040249 c.456A>G synonymous_variant 0.27
clpC1 4040267 c.438A>G synonymous_variant 0.26
clpC1 4040273 c.432T>C synonymous_variant 0.26
clpC1 4040277 c.427_428delTCinsAG synonymous_variant 0.25
clpC1 4040279 c.426C>G synonymous_variant 0.24
clpC1 4040291 c.414G>C synonymous_variant 0.25
clpC1 4040363 c.342A>C synonymous_variant 0.19
clpC1 4040369 c.336C>G synonymous_variant 0.17
clpC1 4040393 c.312G>C synonymous_variant 0.18
clpC1 4040411 c.294T>C synonymous_variant 0.22
clpC1 4040423 c.282A>G synonymous_variant 0.24
clpC1 4040426 c.279T>C synonymous_variant 0.28
clpC1 4040431 c.274T>C synonymous_variant 0.23
clpC1 4040444 c.261C>T synonymous_variant 0.23
clpC1 4040450 c.255A>G synonymous_variant 0.24
clpC1 4040459 c.246C>G synonymous_variant 0.26
clpC1 4040465 c.240T>C synonymous_variant 0.26
clpC1 4040471 c.234T>C synonymous_variant 0.26
clpC1 4040477 c.228G>C synonymous_variant 0.25
clpC1 4040480 c.225T>G synonymous_variant 0.26
clpC1 4040522 c.183T>C synonymous_variant 0.2
embC 4240355 p.Ala165Thr missense_variant 0.17
embC 4240424 p.Arg188Asn missense_variant 0.17
embC 4240671 p.Thr270Ile missense_variant 0.19
embC 4240675 c.813C>T synonymous_variant 0.19
embC 4240702 c.840G>A synonymous_variant 0.18
embC 4240771 c.909G>A synonymous_variant 0.19
embC 4241050 c.1188T>G synonymous_variant 0.23
embC 4241053 c.1191G>C synonymous_variant 0.23
embC 4241081 c.1219C>T synonymous_variant 0.29
embC 4241089 c.1227C>G synonymous_variant 0.33
embC 4241095 c.1233C>T synonymous_variant 0.36
embC 4241107 c.1245G>C synonymous_variant 0.36
embC 4241131 c.1269G>A synonymous_variant 0.38
embC 4241140 c.1278A>G synonymous_variant 0.34
embC 4241146 c.1284C>G synonymous_variant 0.32
embC 4241158 c.1296T>G synonymous_variant 0.31
embC 4241161 c.1299C>G synonymous_variant 0.31
embC 4241162 c.1300T>C synonymous_variant 0.3
embC 4241374 c.1512T>C synonymous_variant 0.17
embC 4241380 c.1518A>C synonymous_variant 0.19
embC 4241383 c.1521G>C synonymous_variant 0.22
embC 4241394 p.Lys511Ser missense_variant 0.23
embC 4241443 c.1581C>T synonymous_variant 0.31
embC 4241449 c.1587C>G synonymous_variant 0.27
embC 4241453 p.Ile531Val missense_variant 0.28
embC 4241464 c.1602C>G synonymous_variant 0.25
embC 4241479 c.1617C>G synonymous_variant 0.24
embC 4241480 c.1618T>C synonymous_variant 0.25
embC 4241488 c.1626G>C synonymous_variant 0.26
embC 4241496 p.Ala545Gly missense_variant 0.28
embC 4241500 c.1638A>C synonymous_variant 0.25
embC 4241501 p.Ser547Thr missense_variant 0.23
embC 4241506 c.1644G>C synonymous_variant 0.24
embC 4241518 c.1656A>G synonymous_variant 0.25
embC 4241521 c.1659T>C synonymous_variant 0.24
embC 4241530 c.1668C>A synonymous_variant 0.23
embC 4241536 c.1674A>C synonymous_variant 0.21
embC 4241539 c.1677T>C synonymous_variant 0.21
embC 4241545 c.1683T>C synonymous_variant 0.21
embC 4241548 c.1686T>C synonymous_variant 0.22
embC 4241551 c.1689A>G synonymous_variant 0.22
embC 4241567 p.Ile569Val missense_variant 0.2
embA 4242643 c.-590C>T upstream_gene_variant 0.86
embA 4242739 c.-494C>G upstream_gene_variant 0.23
embA 4242742 c.-491C>G upstream_gene_variant 0.24
embA 4242745 c.-488A>G upstream_gene_variant 0.24
embC 4242746 p.Pro962Ser missense_variant 0.24
embA 4242754 c.-479G>C upstream_gene_variant 0.22
embC 4242762 p.Arg967Gln missense_variant 0.21
embC 4242764 p.Val968Leu missense_variant 0.21
embC 4242779 p.Asn973Asp missense_variant 0.24
embC 4242791 p.Ala977Ser missense_variant 0.21
embA 4242796 c.-437G>C upstream_gene_variant 0.22
embA 4242799 c.-434T>C upstream_gene_variant 0.22
embA 4242809 c.-424C>T upstream_gene_variant 0.21
embA 4242820 c.-413G>C upstream_gene_variant 0.21
embA 4242823 c.-410G>C upstream_gene_variant 0.19
embA 4242832 c.-401A>G upstream_gene_variant 0.17
embA 4245083 c.1851A>C synonymous_variant 0.19
embA 4245101 c.1869G>A synonymous_variant 0.18
embA 4245137 c.1905T>C synonymous_variant 0.21
embB 4247879 p.Val456Ile missense_variant 0.18
embB 4247893 c.1380C>A synonymous_variant 0.21
embB 4248070 c.1557T>C synonymous_variant 0.19
embB 4248088 c.1575C>T synonymous_variant 0.18
embB 4248097 c.1584C>G synonymous_variant 0.22
embB 4248100 c.1587C>T synonymous_variant 0.22
embB 4248106 c.1593C>T synonymous_variant 0.21
embB 4248115 c.1602C>T synonymous_variant 0.19
embB 4248118 c.1605T>C synonymous_variant 0.2
embB 4248142 c.1629T>C synonymous_variant 0.19
embB 4248143 c.1630T>C synonymous_variant 0.19
embB 4248157 c.1644A>G synonymous_variant 0.2
embB 4248160 c.1647C>T synonymous_variant 0.23
embB 4248169 c.1656C>G synonymous_variant 0.27
embB 4248172 c.1659G>C synonymous_variant 0.26
embB 4248200 p.Ile563Val missense_variant 0.27
embB 4248205 c.1692C>G synonymous_variant 0.27
embB 4248206 p.Ser565Gly missense_variant 0.27
embB 4248220 c.1707A>T synonymous_variant 0.26
embB 4248241 c.1728C>T synonymous_variant 0.26
embB 4248307 c.1794G>C synonymous_variant 0.29
embB 4248316 c.1803C>G synonymous_variant 0.19
embB 4248319 c.1806A>G synonymous_variant 0.19
embB 4248400 c.1887G>C synonymous_variant 0.28
embB 4248407 p.Leu632Val missense_variant 0.27
embB 4248416 p.Leu635Val missense_variant 0.28
embB 4248424 c.1911G>C synonymous_variant 0.26
embB 4248432 p.Trp640Leu missense_variant 0.19
embB 4248466 c.1953C>T synonymous_variant 0.19
embB 4248472 c.1959T>C synonymous_variant 0.22
embB 4248475 c.1962G>A synonymous_variant 0.21
embB 4249369 c.2856T>C synonymous_variant 0.18
embB 4249417 c.2904A>T synonymous_variant 0.17
aftB 4268081 c.756A>G synonymous_variant 0.29
aftB 4268084 c.753G>C synonymous_variant 0.3
aftB 4268096 c.741C>G synonymous_variant 0.24
aftB 4268099 c.738G>C synonymous_variant 0.23
aftB 4268102 c.735C>T synonymous_variant 0.23
aftB 4268105 c.732T>C synonymous_variant 0.26
aftB 4268117 c.720G>C synonymous_variant 0.22
aftB 4268123 p.Ser238Gly missense_variant 0.21
aftB 4268138 c.699A>C synonymous_variant 0.18
aftB 4268180 p.Phe219Leu missense_variant 0.19
aftB 4268183 c.654A>T synonymous_variant 0.17
ubiA 4269075 p.Ile253Val missense_variant 0.26
ubiA 4269086 p.Val250Leu missense_variant 0.24
ubiA 4269088 p.Ala249Val missense_variant 0.24
ubiA 4269100 p.Gly245Glu missense_variant 0.22
ubiA 4269107 p.Tyr243Asp missense_variant 0.22
aftB 4269132 c.-296G>C upstream_gene_variant 0.21
ubiA 4269141 p.Leu231Val missense_variant 0.24
aftB 4269144 c.-308C>G upstream_gene_variant 0.24
ubiA 4269149 p.Val229Leu missense_variant 0.24
whiB6 4338595 c.-75delG upstream_gene_variant 1.0
gid 4408156 p.Leu16Arg missense_variant 0.9