Rv3262 - p.Met351Ile
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
2 Sensitive
3 RR-TB
18 HR-TB
3 MDR-TB
2 Pre-XDR-TB
2 XDR-TB
57 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1 | 2 |
| lineage4.3.4.1 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| La3;lineage2.1;lineage4.9 | 2 |
| lineage2.1;lineage4.9 | 11 |
| lineage2.1;lineage4.9;lineage6.3 | 6 |
| lineage4.9;lineage6.3 | 6 |
| 15 | |
| lineage2.2.1 | 6 |
| M.canetti;lineage2.2 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.9 | 11 |
| lineage4.3.4 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| La3;lineage4.9 | 2 |
| lineage4.8 | 1 |
| La3 | 1 |
| lineage2.1;lineage6.3 | 1 |
| lineage3.1.2 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4 | 2 |
| lineage2.2.2;lineage4 | 1 |
| lineage5.2 | 2 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage2.2 | 1 |
| lineage4.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 87 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR20969677 | HR-TB | lineage2.1 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR9786843 | Other | None | ERR4814352 | Other | lineage2.2.1 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR212123 | Other | lineage4.9 | None | ERR4800341 | Other | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR26159043 | Other | lineage4.9 | None | ERR161037 | Other | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR3675236 | Other | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR29017461 | Other | La3;lineage4.9 | None | SRR12142341 | HR-TB | lineage2.2.1 | None | ERR4817893 | Other | lineage4.8 | None | SRR1172728 | RR-TB | La3 | None | ERR4816585 | Other | lineage2.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR1184294 | Other | lineage4.9 | None | SRR25827682 | Other | None | SRR28119805 | Other | lineage4.9 | None | ERR234659 | Other | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR21732941 | Sensitive | lineage3.1.2 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1173778 | Other | lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR4797054 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR3675214 | Other | lineage4.9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR15368973 | Other | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR4811105 | HR-TB | None | ERR4811142 | RR-TB | None | ERR4810741 | HR-TB | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | SRR1196546 | Other | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR9117721 | HR-TB | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR18003019 | Other | lineage2.2.1 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR702406 | Other | lineage2.1 | None | SRR28119811 | Other | lineage2.2.1 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR1184381 | MDR-TB | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR18213713 | HR-TB | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4815604 | Other | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2513470 | Other | lineage4.2.2.2 | None | SRR29051077 | Other | lineage4.9 | None | ERR4811075 | Other | None | ERR4811311 | Other | None | SRR28119753 | Other | lineage4.9 | None | SRR12416824 | HR-TB | None | ERR3283044 | Other | lineage4 | None |
|---|
