Rv0668 - c.-990T>C


Drug resistance types
34 Sensitive 3 RR-TB 45 HR-TB 16 MDR-TB 2 Pre-XDR-TB 2 XDR-TB 54 Other
lineage Counts
lineage Count
La3;lineage4.9 10
lineage2.2.1.2;lineage7 1
lineage4.9 51
La1.7;lineage4.9 6
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
M.canetti;lineage4.9;lineage9 1
La3;lineage4 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.3.4.2 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La1.2;La1.8.1 1
La1.7;lineage3.1;lineage4 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La1;lineage4.9 1
lineage2.2.1 8
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.8 1
M.canetti;lineage4.9 3
La1.7.1;La1.7.X-unk4;lineage7 1
lineage2.1;lineage4.9;lineage6.3 1
lineage6.1.3 2
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
M.canetti;lineage4.2 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.7 1
M.canetti;lineage2.2 2
La1.7;M.canetti;lineage4.9 3
lineage1;lineage4.9 2
1
La1.7;lineage4.9;lineage6 1
lineage4.6.1.1 1
lineage4.3.4 1
La1.7.X-unk4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La2;lineage4.9 1
La3;lineage4.3.4 1
M.canetti;lineage2.2.2;lineage6.2 2
M.canetti;lineage1 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.7.1;lineage4.9 1
lineage4 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La1;lineage4.1.2 1
La1.7;lineage4.2 1
lineage1.1.1;lineage4 1
lineage5.2 2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage1.2.2.1;lineage4.4.1.1 1
lineage4.9;lineage7 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.5 1
lineage4.2.1.1;lineage4.3.3 1
La2;lineage2.2 1
M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.9 1
lineage3 1
La1.7.1;La1.7.X-unk4 1
lineage4.9;lineage9 1
lineage4.3.4.2.1 1
lineage4.9;lineage6.3 1
lineage4.3.4.1 1
lineage1.1.3.1 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
La1.2.BCG 1
lineage3.1.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
M.canetti;lineage4.6.4;lineage4.9 1
spoligotype Counts
spoligotype Count
None 156
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR181744 HR-TB La3;lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR4811030 Sensitive lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR3283028 Other La3;lineage4 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR29772570 Other lineage4.9 None
SRR3675580 Sensitive lineage4.9 None
ERR400320 Sensitive lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR9786592 Other lineage4.3.4.2 None
SRR3675501 Other La1.7;lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4820773 HR-TB lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR10809074 Sensitive lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR161037 Other lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR400326 Other lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR10808805 Other La1;lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR4817731 HR-TB lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR1023236 Other lineage6.1.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR7496523 Other lineage4.7 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR6866807 Other lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR4796577 HR-TB None
ERR4819241 Other lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR11252736 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR736817 HR-TB lineage4.3.4 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR6358979 Other lineage4.9 None
ERR6866410 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR323107 Sensitive lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR400345 Other lineage4.9 None
SRR29096879 Sensitive lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR400336 Sensitive lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR4816466 HR-TB lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR21677886 Sensitive lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR26399255 Sensitive lineage2.2.1 None
ERR9786346 Sensitive lineage4.3.4.2 None
SRR23961559 Other La1.7;lineage4.2 None
ERR4796929 Sensitive lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR9119500 MDR-TB lineage5.2 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR4769442 Sensitive lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR19295647 Sensitive lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
SRR1140724 Other lineage2.2.1 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4818929 HR-TB lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR4811031 Sensitive lineage4.5 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR12142339 HR-TB lineage2.2.1 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR1062919 HR-TB lineage2.2.1 None
ERR3797048 Other La3;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR3283011 Other La3;lineage4.9 None
ERR4796351 Sensitive lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR11465235 Sensitive lineage4.3.4.2.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR3283021 HR-TB lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR4872094 MDR-TB lineage5.2 None
SRR3675229 Sensitive lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR3675441 Other lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR9787153 Other lineage6.1.3 None
SRR6044835 Other lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR2513121 Sensitive lineage3.1.3 None
ERR3797079 Sensitive lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None