Rv3596c - c.939T>C
Drug resistance types
102 Sensitive
33 RR-TB
106 HR-TB
28 MDR-TB
12 Pre-XDR-TB
1 XDR-TB
231 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 200 |
| 27 | |
| lineage2.1;lineage4.9 | 16 |
| lineage6.1.3 | 1 |
| lineage1.1.1 | 2 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage4.8 | 8 |
| lineage4.3.2.1 | 2 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage6.1.1 | 2 |
| lineage4.6.1.1 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 8 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage2.1 | 5 |
| lineage2;lineage4.9 | 1 |
| lineage4.3.3 | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage4 | 7 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La1.7;lineage4.9 | 6 |
| lineage4.6.5 | 2 |
| lineage2.2.1.1 | 6 |
| lineage3 | 13 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 8 |
| lineage2.2.1 | 26 |
| lineage1.2.1.1 | 1 |
| La1.6;La3;lineage4.9 | 2 |
| La3;lineage4.9 | 12 |
| lineage4.1;lineage4.8 | 2 |
| La1.7;lineage3.1;lineage4 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage4.6.2.2 | 5 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La1;lineage4.9 | 3 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1 | 13 |
| lineage4.2.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.4.1.2 | 1 |
| La3 | 2 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.9;lineage7 | 4 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| La1.2.BCG | 2 |
| lineage4.6.3;lineage4.9 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 3 |
| La1.7;M.canetti;lineage4.9 | 3 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.5 | 1 |
| lineage2.2 | 4 |
| lineage4.3.4.2.1 | 3 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| lineage6.3.1 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La2;lineage2.2 | 1 |
| lineage4.4.2 | 3 |
| La2;lineage4.9 | 2 |
| lineage2.2;lineage4.9 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage4.4 | 1 |
| La1.2;La1.8.1 | 1 |
| La1.3 | 1 |
| lineage3.1.2.2 | 1 |
| M.canetti;lineage1 | 1 |
| lineage5.2 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage1.1.3.1 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage3.1 | 1 |
| La1.8.1 | 2 |
| lineage6.1.2 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| La1.6 | 1 |
| La3;lineage4.8 | 1 |
| lineage4.3.3;lineage4.8 | 1 |
| La3;lineage4 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La3;lineage2 | 1 |
| lineage4.7 | 2 |
| lineage2.1;lineage6.3 | 2 |
| La3;lineage1.1.2 | 1 |
| La1.7.1 | 2 |
| M.canetti;lineage4.9 | 2 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.3 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.8.1 | 1 |
| La3;lineage2.2.1 | 1 |
| La3;lineage4.3.4 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.1.3 | 2 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| M.canetti;lineage2.1 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage3.1.3 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.1 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 513 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4815752 | Other | lineage4.9 | None | SRR3675572 | Other | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR3675457 | Other | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | SRR29096410 | Other | lineage4.9 | None | ERR9787165 | Other | lineage6.1.3 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819241 | Other | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3675275 | Other | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR6358755 | Other | lineage4.6.1.1 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR1710057 | Other | lineage2.1 | None | SRR1175074 | Other | None | ERR502481 | RR-TB | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR6045053 | Other | lineage4 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6046046 | Other | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR9896144 | Other | lineage3 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR1049672 | Other | lineage3 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1184312 | Other | lineage2.2.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR16156775 | Other | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR15368973 | Other | lineage4.9 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | SRR6046066 | Other | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR2446566 | Other | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR4831863 | HR-TB | lineage2.2.1.1 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR28119753 | Other | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR29017461 | Other | La3;lineage4.9 | None | ERR3283044 | Other | lineage4 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR323037 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR9117709 | Other | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | SRR1172817 | Other | La3 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR4769452 | Other | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | SRR29016780 | Other | lineage4.9 | None | SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR3675312 | Sensitive | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR29097037 | Other | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR212001 | HR-TB | None | SRR1172857 | Other | None | ERR9787197 | Other | None | SRR6789621 | Other | lineage4.9 | None | ERR234659 | Other | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR4407463 | HR-TB | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR1172951 | Other | lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR1196768 | MDR-TB | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR752229 | Other | lineage4.5 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR18213713 | HR-TB | None | SRR6044875 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR3675214 | Other | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR9786627 | Other | lineage4.1.2.1 | None | SRR3416776 | Other | lineage2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR1169194 | Other | lineage4.9 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR736848 | Other | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR1196494 | MDR-TB | None | ERR323107 | Sensitive | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR6789626 | Other | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4816999 | Other | None | SRR26159043 | Other | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR4769495 | Other | La1.3 | None | ERR4769450 | Other | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR4819933 | Sensitive | lineage4.9 | None | SRR1196546 | Other | lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR29093909 | Other | lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR926163 | Other | lineage4.9 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR7535086 | Other | None | ERR926159 | Sensitive | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4800341 | Other | lineage3 | None | SRR1172728 | RR-TB | La3 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR4816656 | Other | lineage4.9 | None | SRR1173400 | Other | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR7496509 | Other | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR1184329 | Other | lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1792022 | Other | La1.8.1 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR7496472 | Other | lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | SRR1196478 | Other | lineage4.9 | None | SRR1183145 | Other | lineage2.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR1180270 | Other | lineage2.2.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786642 | Other | lineage4.1.2.1 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4817069 | RR-TB | None | ERR2514692 | Other | None | SRR25827682 | Other | None | SRR28119805 | Other | lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | SRR1173153 | Other | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR6045832 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | ERR2514390 | Sensitive | lineage3.1.2.1;lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR1196583 | Other | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR4817998 | Other | lineage3 | None | SRR10993951 | RR-TB | La1.6 | None | ERR4817893 | Other | La3;lineage4.8 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR3283028 | Other | La3;lineage4 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR387051 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR4817735 | Other | lineage4.8 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3797069 | Other | lineage4.9 | None | ERR4819932 | Other | lineage4.7 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR4817204 | Other | lineage4.9 | None | SRR6046210 | Other | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR7496517 | Other | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR4816585 | Other | lineage2.2 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | SRR6046492 | Other | lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR4815604 | Other | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR212123 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR29016901 | Other | La3;lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | SRR29055629 | MDR-TB | La3;lineage2.2.1 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR161037 | Other | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR3675582 | Other | lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | SRR3675236 | Other | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR3283032 | Other | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR212138 | HR-TB | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR702406 | Other | lineage2.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR176740 | Other | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | SRR3675311 | Other | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR6046485 | Other | lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | ERR323041 | HR-TB | M.canetti;lineage2.1 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4815556 | RR-TB | lineage3 | None | SRR5341456 | Other | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR9786843 | Other | None | SRR8692905 | Sensitive | None | SRR1184381 | MDR-TB | None | SRR3675221 | Other | lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786421 | Other | lineage4.1.2.1 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR7240492 | HR-TB | La1.7.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR1184372 | MDR-TB | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR9786604 | Other | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR6045555 | Other | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR9786440 | Other | lineage4.1 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None |
|---|
