TB-Profiler result

Run: ERR4817998
Summary

Run ID: ERR4817998

Sample name:

Date: 01-04-2023 15:18:42

Number of reads: 3041318

Percentage reads mapped: 74.14

Strain: lineage3

Drug-resistance: Other

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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage3 East-African-Indian CAS RD750 1.0
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
rrs 1472733 n.888G>A non_coding_transcript_exon_variant 0.48 streptomycin
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrB 6157 c.918C>T synonymous_variant 0.24
gyrB 6184 c.945C>G synonymous_variant 0.17
gyrB 6196 c.957C>A synonymous_variant 0.17
gyrB 6203 p.Ser322Ala missense_variant 0.19
gyrB 6211 c.972G>C synonymous_variant 0.18
gyrB 6215 p.Ser326Thr missense_variant 0.18
gyrB 6223 c.984G>C synonymous_variant 0.18
gyrA 6571 c.-731T>C upstream_gene_variant 0.12
gyrA 6577 c.-725T>C upstream_gene_variant 0.12
gyrA 6583 c.-719G>C upstream_gene_variant 0.12
gyrB 6590 p.Arg451Ser missense_variant 0.13
gyrA 6598 c.-704C>G upstream_gene_variant 0.13
gyrA 6610 c.-692C>G upstream_gene_variant 0.18
gyrA 6613 c.-689A>G upstream_gene_variant 0.19
gyrA 6616 c.-686A>G upstream_gene_variant 0.19
gyrA 6637 c.-665T>G upstream_gene_variant 0.13
gyrA 6655 c.-647T>C upstream_gene_variant 0.12
gyrA 6670 c.-632G>C upstream_gene_variant 0.13
gyrA 6673 c.-629A>C upstream_gene_variant 0.17
gyrA 6676 c.-626T>G upstream_gene_variant 0.16
gyrA 6700 c.-602T>C upstream_gene_variant 0.15
gyrA 6703 c.-599G>T upstream_gene_variant 0.16
gyrA 6706 c.-596G>A upstream_gene_variant 0.15
gyrA 6709 c.-593A>G upstream_gene_variant 0.15
gyrA 6712 c.-590G>C upstream_gene_variant 0.16
gyrA 6715 c.-587C>T upstream_gene_variant 0.17
gyrA 6727 c.-575G>T upstream_gene_variant 0.15
gyrA 6728 c.-574_-572delCTAinsTTG upstream_gene_variant 0.15
gyrA 6745 c.-557T>C upstream_gene_variant 0.2
gyrA 6760 c.-542G>C upstream_gene_variant 0.16
gyrA 6764 c.-538C>T upstream_gene_variant 0.15
gyrA 6772 c.-530C>G upstream_gene_variant 0.15
gyrA 6775 c.-527G>T upstream_gene_variant 0.15
gyrB 6798 p.Gly520Ala missense_variant 0.15
gyrA 6808 c.-494C>G upstream_gene_variant 0.14
gyrA 6811 c.-491C>T upstream_gene_variant 0.15
gyrA 6824 c.-478C>T upstream_gene_variant 0.16
gyrA 6841 c.-461T>C upstream_gene_variant 0.11
gyrA 7120 c.-182T>C upstream_gene_variant 0.16
gyrA 7129 c.-173T>G upstream_gene_variant 0.16
gyrA 7136 c.-166T>C upstream_gene_variant 0.21
gyrA 7144 c.-158A>G upstream_gene_variant 0.26
gyrA 7150 c.-152G>A upstream_gene_variant 0.28
gyrA 7153 c.-149G>C upstream_gene_variant 0.29
gyrA 7159 c.-143C>T upstream_gene_variant 0.3
gyrA 7162 c.-140C>G upstream_gene_variant 0.29
gyrA 7168 c.-134C>G upstream_gene_variant 0.32
gyrA 7178 c.-124T>C upstream_gene_variant 0.27
gyrA 7186 c.-116C>G upstream_gene_variant 0.21
gyrA 7189 c.-113C>T upstream_gene_variant 0.19
gyrB 7210 p.Asp657Glu missense_variant 0.15
gyrA 7216 c.-86G>C upstream_gene_variant 0.16
gyrA 7225 c.-77T>C upstream_gene_variant 0.15
gyrA 7355 c.54T>A synonymous_variant 0.14
gyrA 7362 p.Glu21Gln missense_variant 1.0
gyrA 7391 c.90C>T synonymous_variant 0.14
gyrA 7394 c.93T>C synonymous_variant 0.15
gyrA 7397 c.96G>C synonymous_variant 0.15
gyrA 7406 c.105G>C synonymous_variant 0.16
gyrA 7412 c.111C>G synonymous_variant 0.14
gyrA 7421 c.120G>T synonymous_variant 0.14
gyrA 7427 c.126G>C synonymous_variant 0.16
gyrA 7430 c.129G>A synonymous_variant 0.16
gyrA 7439 c.138C>T synonymous_variant 0.16
gyrA 7457 c.156T>C synonymous_variant 0.16
gyrA 7463 c.162G>C synonymous_variant 0.14
gyrA 7466 c.165G>C synonymous_variant 0.12
gyrA 7472 c.171T>C synonymous_variant 0.11
gyrA 7475 c.174A>G synonymous_variant 0.12
gyrA 7480 p.Phe60Tyr missense_variant 0.18
gyrA 7484 c.183T>C synonymous_variant 0.18
gyrA 7490 c.189C>G synonymous_variant 0.22
gyrA 7496 c.195C>G synonymous_variant 0.21
gyrA 7499 c.198G>C synonymous_variant 0.22
gyrA 7523 c.222C>G synonymous_variant 0.2
gyrA 7526 c.225G>C synonymous_variant 0.19
gyrA 7532 c.231T>G synonymous_variant 0.2
gyrA 7547 c.246C>T synonymous_variant 0.23
gyrA 7559 c.258G>A synonymous_variant 0.24
gyrA 7571 c.270G>C synonymous_variant 0.25
gyrA 7574 c.273G>C synonymous_variant 0.25
gyrA 7585 p.Ser95Thr missense_variant 1.0
gyrA 7587 c.286C>T synonymous_variant 0.15
gyrA 7595 c.294C>T synonymous_variant 0.14
gyrA 7601 c.300C>G synonymous_variant 0.14
gyrA 7847 c.546G>C synonymous_variant 0.15
gyrA 7853 c.552C>T synonymous_variant 0.15
gyrA 7859 c.558A>C synonymous_variant 0.16
gyrA 7865 c.564T>C synonymous_variant 0.15
gyrA 7868 p.Ile189Met missense_variant 0.15
gyrA 8294 c.993T>C synonymous_variant 0.16
gyrA 8324 c.1023T>C synonymous_variant 0.15
gyrA 8339 c.1038A>G synonymous_variant 0.14
gyrA 8340 p.Ala347Ser missense_variant 0.14
gyrA 8354 c.1053G>C synonymous_variant 0.13
gyrA 8897 c.1596T>C synonymous_variant 0.15
gyrA 8915 c.1614A>G synonymous_variant 0.16
gyrA 8924 c.1623C>T synonymous_variant 0.2
gyrA 8945 c.1644G>C synonymous_variant 0.18
gyrA 8946 c.1645_1647delTTGinsCTC synonymous_variant 0.17
gyrA 8967 p.Ala556Lys missense_variant 0.2
gyrA 8987 c.1686C>G synonymous_variant 0.16
gyrA 8990 c.1689C>G synonymous_variant 0.18
gyrA 8993 c.1692C>T synonymous_variant 0.16
gyrA 8996 c.1695T>C synonymous_variant 0.18
gyrA 8998 p.Leu566Trp missense_variant 0.19
gyrA 9018 p.Gln573Lys missense_variant 0.18
gyrA 9023 c.1722A>T synonymous_variant 0.16
gyrA 9026 c.1725G>C synonymous_variant 0.13
gyrA 9044 c.1743C>G synonymous_variant 0.15
gyrA 9304 p.Gly668Asp missense_variant 1.0
fgd1 491742 c.960T>C synonymous_variant 1.0
rpoB 759746 c.-61C>T upstream_gene_variant 1.0
rpoB 760184 c.378A>G synonymous_variant 0.21
rpoB 760196 c.390C>G synonymous_variant 0.21
rpoB 760223 c.417T>C synonymous_variant 0.2
rpoB 760235 c.429T>C synonymous_variant 0.15
rpoB 760244 c.438G>C synonymous_variant 0.14
rpoB 760370 c.564C>G synonymous_variant 0.13
rpoB 760376 p.Asp190Glu missense_variant 0.12
rpoB 760382 c.576G>C synonymous_variant 0.16
rpoB 760400 c.594G>C synonymous_variant 0.18
rpoB 760406 c.600G>C synonymous_variant 0.17
rpoB 760407 p.Ser201Gly missense_variant 0.17
rpoB 760412 c.606C>T synonymous_variant 0.18
rpoB 760415 c.609C>T synonymous_variant 0.19
rpoB 760418 c.612G>A synonymous_variant 0.2
rpoB 760430 c.624T>C synonymous_variant 0.27
rpoB 760433 c.627C>T synonymous_variant 0.31
rpoB 760454 c.648C>G synonymous_variant 0.26
rpoB 760457 c.651C>T synonymous_variant 0.24
rpoB 760469 c.663C>T synonymous_variant 0.21
rpoB 760475 c.669A>G synonymous_variant 0.22
rpoB 760478 c.672C>T synonymous_variant 0.19
rpoB 760481 c.675G>T synonymous_variant 0.2
rpoB 760484 c.678A>G synonymous_variant 0.17
rpoB 760487 c.681G>C synonymous_variant 0.17
rpoB 760502 c.696C>G synonymous_variant 0.17
rpoB 760508 c.702G>A synonymous_variant 0.18
rpoB 760511 c.705G>C synonymous_variant 0.16
rpoB 760611 c.805T>C synonymous_variant 0.13
rpoB 760646 c.840C>G synonymous_variant 0.17
rpoB 760655 c.849A>G synonymous_variant 0.18
rpoB 760661 c.855A>C synonymous_variant 0.17
rpoB 760668 p.Thr288Ala missense_variant 0.14
rpoB 760674 c.868T>C synonymous_variant 0.12
rpoB 760683 c.877T>C synonymous_variant 0.12
rpoB 760862 c.1056G>C synonymous_variant 0.11
rpoB 760869 p.Val355Leu missense_variant 0.12
rpoB 760910 c.1104C>T synonymous_variant 0.14
rpoB 760916 c.1110C>T synonymous_variant 0.14
rpoB 760919 c.1113C>T synonymous_variant 0.14
rpoB 760997 c.1191G>C synonymous_variant 0.12
rpoB 761084 c.1278C>A synonymous_variant 0.14
rpoB 761097 c.1291_1293delAGCinsTCG synonymous_variant 0.13
rpoB 761102 c.1296A>G synonymous_variant 0.12
rpoB 761147 c.1341C>T synonymous_variant 0.18
rpoB 761150 c.1344A>T synonymous_variant 0.18
rpoB 761165 c.1359G>C synonymous_variant 0.21
rpoB 761171 c.1365C>T synonymous_variant 0.2
rpoB 761178 p.Ser458Thr missense_variant 0.16
rpoB 761186 p.Glu460Asp missense_variant 0.16
rpoB 761189 c.1383T>C synonymous_variant 0.16
rpoB 761195 c.1389G>C synonymous_variant 0.15
rpoB 761198 c.1392G>T synonymous_variant 0.16
rpoB 761219 c.1413G>C synonymous_variant 0.2
rpoB 761234 c.1428G>C synonymous_variant 0.18
rpoB 761249 c.1443A>G synonymous_variant 0.12
rpoB 761255 c.1449T>G synonymous_variant 0.11
rpoB 761555 c.1749G>C synonymous_variant 0.11
rpoB 761558 c.1752C>G synonymous_variant 0.11
rpoB 761570 c.1764T>C synonymous_variant 0.12
rpoB 761573 c.1767C>G synonymous_variant 0.12
rpoB 761579 c.1773G>C synonymous_variant 0.12
rpoB 761612 c.1806G>T synonymous_variant 0.19
rpoB 761615 c.1809A>C synonymous_variant 0.19
rpoB 761636 c.1830G>T synonymous_variant 0.18
rpoB 761645 c.1839C>G synonymous_variant 0.17
rpoB 761648 c.1842T>C synonymous_variant 0.17
rpoB 761666 c.1860G>C synonymous_variant 0.14
rpoB 761669 c.1863C>T synonymous_variant 0.15
rpoB 761675 c.1869G>T synonymous_variant 0.16
rpoB 761687 c.1881C>T synonymous_variant 0.16
rpoB 761690 c.1884G>C synonymous_variant 0.13
rpoB 761693 c.1887G>C synonymous_variant 0.14
rpoB 761750 c.1944G>C synonymous_variant 0.12
rpoB 761760 p.Ile652Val missense_variant 0.12
rpoB 762167 c.2361T>C synonymous_variant 0.14
rpoB 762176 c.2370T>C synonymous_variant 0.13
rpoB 762185 c.2379G>C synonymous_variant 0.11
rpoB 762233 c.2427G>C synonymous_variant 0.25
rpoB 762236 c.2430G>C synonymous_variant 0.25
rpoB 762245 c.2439G>C synonymous_variant 0.23
rpoB 762284 c.2478G>T synonymous_variant 0.2
rpoB 762293 c.2487T>C synonymous_variant 0.22
rpoB 762296 c.2490G>C synonymous_variant 0.21
rpoB 762299 c.2493G>C synonymous_variant 0.21
rpoB 762317 c.2511A>G synonymous_variant 0.12
rpoC 762434 c.-936T>G upstream_gene_variant 0.91
rpoC 762509 c.-861T>G upstream_gene_variant 0.13
rpoB 762510 p.Ala902Pro missense_variant 0.13
rpoC 762515 c.-855C>T upstream_gene_variant 0.14
rpoB 762879 p.Met1025Leu missense_variant 0.18
rpoC 762894 c.-476C>T upstream_gene_variant 0.19
rpoC 762899 c.-471G>C upstream_gene_variant 0.21
rpoC 762911 c.-459C>T upstream_gene_variant 0.19
rpoC 762917 c.-453C>G upstream_gene_variant 0.18
rpoC 762920 c.-450C>T upstream_gene_variant 0.2
rpoC 762923 c.-447C>G upstream_gene_variant 0.2
rpoC 762959 c.-411G>C upstream_gene_variant 0.17
rpoC 762962 c.-408C>T upstream_gene_variant 0.19
rpoC 762983 c.-387C>T upstream_gene_variant 0.16
rpoC 762989 c.-381G>A upstream_gene_variant 0.16
rpoC 762995 c.-375G>T upstream_gene_variant 0.19
rpoC 763031 c.-339T>G upstream_gene_variant 1.0
rpoC 763034 c.-336C>A upstream_gene_variant 0.24
rpoC 763040 c.-330C>G upstream_gene_variant 0.26
rpoC 763070 c.-300T>C upstream_gene_variant 0.23
rpoC 763076 c.-294C>A upstream_gene_variant 0.23
rpoC 763082 c.-288C>T upstream_gene_variant 0.28
rpoC 763088 c.-282C>G upstream_gene_variant 0.28
rpoC 763094 c.-276G>C upstream_gene_variant 0.23
rpoC 763115 c.-255T>C upstream_gene_variant 0.2
rpoC 763127 c.-243G>C upstream_gene_variant 0.2
rpoC 763136 c.-234C>T upstream_gene_variant 0.16
rpoC 763142 c.-228C>G upstream_gene_variant 0.14
rpoC 763157 c.-213G>T upstream_gene_variant 0.13
rpoC 763492 c.123G>C synonymous_variant 0.15
rpoC 763528 c.159G>A synonymous_variant 0.33
rpoC 763531 c.162G>T synonymous_variant 0.32
rpoC 763546 c.177A>G synonymous_variant 0.33
rpoC 763570 c.201G>C synonymous_variant 0.34
rpoC 763594 c.225C>T synonymous_variant 0.25
rpoC 763618 c.249C>T synonymous_variant 0.16
rpoC 763633 c.264T>C synonymous_variant 0.13
rpoC 763660 c.291T>G synonymous_variant 0.14
rpoC 763666 c.297G>C synonymous_variant 0.17
rpoC 763669 c.300C>G synonymous_variant 0.17
rpoC 763675 c.306C>G synonymous_variant 0.17
rpoC 763699 c.330G>T synonymous_variant 0.17
rpoC 763702 c.333C>G synonymous_variant 0.16
rpoC 763708 c.339G>T synonymous_variant 0.16
rpoC 763711 c.342G>C synonymous_variant 0.16
rpoC 763714 c.345G>A synonymous_variant 0.15
rpoC 763717 c.348T>C synonymous_variant 0.15
rpoC 763723 c.354G>C synonymous_variant 0.14
rpoC 763732 c.363C>G synonymous_variant 0.15
rpoC 764344 c.975C>T synonymous_variant 0.16
rpoC 764353 c.984G>T synonymous_variant 0.19
rpoC 764365 c.996C>T synonymous_variant 0.22
rpoC 764371 c.1002G>T synonymous_variant 0.22
rpoC 764377 c.1008C>G synonymous_variant 0.22
rpoC 764380 c.1011G>C synonymous_variant 0.21
rpoC 764387 c.1018T>C synonymous_variant 0.22
rpoC 764392 c.1023C>T synonymous_variant 0.23
rpoC 764405 c.1036_1038delAGGinsCGC synonymous_variant 0.22
rpoC 764428 c.1059G>C synonymous_variant 0.19
rpoC 764431 c.1062G>C synonymous_variant 0.15
rpoC 764434 c.1065A>G synonymous_variant 0.15
rpoC 764435 c.1066_1068delAGGinsCGA synonymous_variant 0.15
rpoC 764461 c.1092A>G synonymous_variant 0.13
rpoC 764578 c.1209C>G synonymous_variant 0.12
rpoC 764593 c.1224C>T synonymous_variant 0.17
rpoC 764602 c.1233C>T synonymous_variant 0.17
rpoC 764611 c.1242G>C synonymous_variant 0.15
rpoC 764626 c.1257C>T synonymous_variant 0.21
rpoC 764632 c.1263T>C synonymous_variant 0.24
rpoC 764635 c.1266C>T synonymous_variant 0.25
rpoC 764650 c.1281G>T synonymous_variant 0.25
rpoC 764713 c.1344G>T synonymous_variant 0.24
rpoC 764746 c.1377G>T synonymous_variant 0.2
rpoC 764752 c.1383G>C synonymous_variant 0.2
rpoC 764758 c.1389C>G synonymous_variant 0.19
rpoC 764764 c.1395T>C synonymous_variant 0.19
rpoC 764803 c.1434C>T synonymous_variant 0.22
rpoC 764810 p.Pro481Ala missense_variant 0.2
rpoC 764815 c.1446A>G synonymous_variant 0.24
rpoC 764827 c.1458G>C synonymous_variant 0.28
rpoC 764858 c.1489T>C synonymous_variant 0.25
rpoC 764869 c.1500C>T synonymous_variant 0.23
rpoC 764875 c.1506C>A synonymous_variant 0.25
rpoC 764878 c.1509C>G synonymous_variant 0.25
rpoC 764887 c.1518G>C synonymous_variant 0.26
rpoC 764888 c.1519T>C synonymous_variant 0.25
rpoC 764911 c.1542A>G synonymous_variant 0.24
rpoC 764912 p.Met515Gln missense_variant 0.24
rpoC 764932 c.1563C>A synonymous_variant 0.24
rpoC 764948 c.1579T>C synonymous_variant 0.22
rpoC 764968 c.1599T>C synonymous_variant 0.18
rpoC 765047 c.1678T>C synonymous_variant 0.13
rpoC 765055 c.1686C>G synonymous_variant 0.16
rpoC 765073 c.1704G>C synonymous_variant 0.14
rpoC 765076 c.1707A>G synonymous_variant 0.13
rpoC 765079 c.1710T>G synonymous_variant 0.13
rpoC 765082 c.1713G>C synonymous_variant 0.14
rpoC 765085 c.1716T>C synonymous_variant 0.14
rpoC 765089 c.1720T>C synonymous_variant 0.14
rpoC 765103 c.1734G>T synonymous_variant 0.14
rpoC 765379 c.2010G>C synonymous_variant 0.12
rpoC 765394 c.2025G>A synonymous_variant 0.15
rpoC 765403 c.2034G>C synonymous_variant 0.14
rpoC 765405 p.Leu679His missense_variant 0.14
rpoC 765409 c.2040T>G synonymous_variant 0.15
rpoC 765412 c.2043T>C synonymous_variant 0.16
rpoC 765421 c.2052C>G synonymous_variant 0.18
rpoC 765449 p.Ala694Ser missense_variant 0.17
rpoC 765454 c.2085C>G synonymous_variant 0.17
rpoC 765469 c.2100G>C synonymous_variant 0.15
rpoC 765478 c.2109T>G synonymous_variant 0.12
rpoC 765480 p.Tyr704Phe missense_variant 0.12
rpoC 765496 c.2127C>T synonymous_variant 0.13
rpoC 765499 c.2130C>G synonymous_variant 0.13
rpoC 765871 c.2502T>G synonymous_variant 0.12
rpoC 765886 c.2517C>G synonymous_variant 0.12
rpoC 766618 c.3249G>T synonymous_variant 0.11
rpoC 766624 c.3255G>C synonymous_variant 0.11
rpoC 766630 c.3261G>C synonymous_variant 0.11
rpoC 766975 c.3606C>T synonymous_variant 0.12
rpoC 766996 c.3627C>T synonymous_variant 0.23
rpoC 767002 c.3633G>C synonymous_variant 0.24
rpoC 767008 c.3639G>A synonymous_variant 0.23
rpoC 767044 c.3675G>C synonymous_variant 0.18
rpoC 767080 c.3711G>C synonymous_variant 0.18
rpoC 767098 c.3729T>C synonymous_variant 0.13
rpoC 767100 p.Lys1244Arg missense_variant 0.13
rpoC 767107 c.3738C>T synonymous_variant 0.12
mmpL5 775639 p.Ile948Val missense_variant 1.0
mmpL5 776100 p.Thr794Ile missense_variant 1.0
rpsL 781395 c.-165T>C upstream_gene_variant 1.0
rpsL 781802 c.243G>C synonymous_variant 0.14
rpsL 781808 c.249C>T synonymous_variant 0.15
rpsL 781811 c.252C>T synonymous_variant 0.15
rpsL 781814 c.255C>T synonymous_variant 0.14
rpsL 781817 c.258G>T synonymous_variant 0.16
rpsL 781829 c.270G>C synonymous_variant 0.17
rpsL 781832 c.273T>C synonymous_variant 0.17
rpsL 781859 c.300T>C synonymous_variant 0.15
rpsL 781868 c.309T>C synonymous_variant 0.13
rpsL 781871 c.312G>C synonymous_variant 0.14
rpsL 781877 c.318T>A synonymous_variant 0.14
rplC 800672 c.-137G>C upstream_gene_variant 0.12
rplC 800693 c.-116A>C upstream_gene_variant 0.15
rplC 800703 c.-106_-104delTTGinsCTC upstream_gene_variant 0.15
rplC 800715 c.-94A>C upstream_gene_variant 0.14
rplC 800720 c.-89T>C upstream_gene_variant 0.14
rplC 800723 c.-86C>G upstream_gene_variant 0.12
rplC 800735 c.-74C>G upstream_gene_variant 0.12
Rv1258c 1407274 p.Asp23Asn missense_variant 1.0
atpE 1461197 c.153A>C synonymous_variant 0.14
atpE 1461219 c.175T>C synonymous_variant 0.15
atpE 1461230 c.186G>T synonymous_variant 0.13
atpE 1461233 c.189A>G synonymous_variant 0.12
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1471922 n.78delT non_coding_transcript_exon_variant 0.31
rrs 1471925 n.80T>C non_coding_transcript_exon_variant 0.31
rrs 1471931 n.87delA non_coding_transcript_exon_variant 0.3
rrs 1471934 n.89A>G non_coding_transcript_exon_variant 0.3
rrs 1471985 n.140T>C non_coding_transcript_exon_variant 0.27
rrs 1471986 n.141C>T non_coding_transcript_exon_variant 0.27
rrs 1472030 n.185G>A non_coding_transcript_exon_variant 0.27
rrs 1472031 n.186G>C non_coding_transcript_exon_variant 0.27
rrs 1472032 n.187G>A non_coding_transcript_exon_variant 0.27
rrs 1472033 n.188A>C non_coding_transcript_exon_variant 0.27
rrs 1472035 n.190G>T non_coding_transcript_exon_variant 0.27
rrs 1472040 n.195T>G non_coding_transcript_exon_variant 0.25
rrs 1472041 n.196C>T non_coding_transcript_exon_variant 0.25
rrs 1472042 n.197T>G non_coding_transcript_exon_variant 0.27
rrs 1472043 n.198T>A non_coding_transcript_exon_variant 0.27
rrs 1472050 n.205G>C non_coding_transcript_exon_variant 0.3
rrs 1472053 n.211_212delGC non_coding_transcript_exon_variant 0.38
rrs 1472061 n.216A>T non_coding_transcript_exon_variant 0.33
rrs 1472075 n.230A>G non_coding_transcript_exon_variant 0.14
rrs 1472078 n.233C>T non_coding_transcript_exon_variant 0.14
rrs 1472102 n.257G>A non_coding_transcript_exon_variant 0.14
rrs 1472106 n.261G>A non_coding_transcript_exon_variant 0.36
rrs 1472108 n.263C>T non_coding_transcript_exon_variant 0.43
rrs 1472112 n.267C>T non_coding_transcript_exon_variant 0.12
rrs 1472113 n.268T>C non_coding_transcript_exon_variant 0.38
rrs 1472122 n.277G>T non_coding_transcript_exon_variant 0.18
rrs 1472123 n.278A>T non_coding_transcript_exon_variant 0.18
rrs 1472124 n.279C>T non_coding_transcript_exon_variant 0.18
rrs 1472150 n.305T>A non_coding_transcript_exon_variant 0.59
rrs 1472155 n.310C>T non_coding_transcript_exon_variant 0.13
rrs 1472160 n.315C>T non_coding_transcript_exon_variant 0.14
rrs 1472172 n.327T>C non_coding_transcript_exon_variant 0.25
rrs 1472225 n.380C>A non_coding_transcript_exon_variant 0.14
rrs 1472251 n.406G>A non_coding_transcript_exon_variant 0.67
rrs 1472337 n.492C>G non_coding_transcript_exon_variant 0.33
rrs 1472380 n.535G>C non_coding_transcript_exon_variant 0.67
rrs 1472446 n.601T>A non_coding_transcript_exon_variant 1.0
rrs 1472452 n.607G>A non_coding_transcript_exon_variant 1.0
rrs 1472464 n.619A>G non_coding_transcript_exon_variant 1.0
rrs 1472517 n.672T>A non_coding_transcript_exon_variant 0.4
rrs 1472518 n.673G>T non_coding_transcript_exon_variant 0.4
rrs 1472530 n.685G>A non_coding_transcript_exon_variant 0.44
rrs 1472537 n.692C>T non_coding_transcript_exon_variant 0.36
rrs 1472544 n.699C>A non_coding_transcript_exon_variant 0.46
rrs 1472545 n.700A>T non_coding_transcript_exon_variant 0.46
rrs 1472566 n.721G>A non_coding_transcript_exon_variant 0.5
rrs 1472571 n.726G>C non_coding_transcript_exon_variant 0.47
rrs 1472579 n.734G>C non_coding_transcript_exon_variant 0.42
rrs 1472580 n.735C>T non_coding_transcript_exon_variant 0.36
rrs 1472581 n.736A>T non_coding_transcript_exon_variant 0.62
rrs 1472598 n.753A>C non_coding_transcript_exon_variant 0.5
rrs 1472599 n.754G>T non_coding_transcript_exon_variant 0.5
rrs 1472612 n.767G>T non_coding_transcript_exon_variant 0.33
rrs 1472616 n.771G>A non_coding_transcript_exon_variant 0.36
rrs 1472697 n.852T>C non_coding_transcript_exon_variant 0.25
rrs 1472713 n.868T>C non_coding_transcript_exon_variant 0.45
rrs 1472714 n.869A>G non_coding_transcript_exon_variant 0.35
rrs 1472716 n.871C>T non_coding_transcript_exon_variant 0.45
rrs 1472734 n.889C>T non_coding_transcript_exon_variant 0.16
rrs 1472741 n.896G>A non_coding_transcript_exon_variant 0.15
rrs 1472742 n.897C>T non_coding_transcript_exon_variant 0.46
rrs 1472744 n.899A>G non_coding_transcript_exon_variant 0.46
rrs 1472755 n.910G>A non_coding_transcript_exon_variant 0.24
rrs 1472781 n.936C>T non_coding_transcript_exon_variant 0.48
rrs 1472790 n.945T>C non_coding_transcript_exon_variant 0.47
rrs 1472793 n.948A>T non_coding_transcript_exon_variant 0.35
rrs 1472803 n.958T>A non_coding_transcript_exon_variant 0.4
rrs 1472846 n.1001C>T non_coding_transcript_exon_variant 0.67
rrs 1472847 n.1002G>A non_coding_transcript_exon_variant 0.67
rrs 1472848 n.1003T>C non_coding_transcript_exon_variant 0.67
rrs 1472860 n.1015C>T non_coding_transcript_exon_variant 0.83
rrs 1472861 n.1016G>A non_coding_transcript_exon_variant 0.83
rrs 1472952 n.1107T>C non_coding_transcript_exon_variant 0.22
rrs 1472955 n.1110C>T non_coding_transcript_exon_variant 0.25
rrs 1472956 n.1111T>C non_coding_transcript_exon_variant 1.0
rrs 1472957 n.1112C>T non_coding_transcript_exon_variant 1.0
rrs 1472969 n.1124A>G non_coding_transcript_exon_variant 0.5
rrs 1472970 n.1125C>G non_coding_transcript_exon_variant 0.5
rrs 1472973 n.1128A>T non_coding_transcript_exon_variant 0.36
rrs 1472977 n.1132G>C non_coding_transcript_exon_variant 0.54
rrs 1472978 n.1133T>C non_coding_transcript_exon_variant 0.5
rrs 1472987 n.1142G>A non_coding_transcript_exon_variant 0.36
rrs 1472989 n.1144G>A non_coding_transcript_exon_variant 0.79
rrs 1472990 n.1145A>G non_coding_transcript_exon_variant 0.93
rrs 1472992 n.1147A>G non_coding_transcript_exon_variant 0.12
rrs 1473005 n.1160C>T non_coding_transcript_exon_variant 0.12
rrs 1473035 n.1190G>A non_coding_transcript_exon_variant 0.67
rrs 1473055 n.1210C>T non_coding_transcript_exon_variant 0.63
rrs 1473056 n.1211A>T non_coding_transcript_exon_variant 0.63
rrs 1473066 n.1221A>G non_coding_transcript_exon_variant 0.62
rrs 1473081 n.1236C>T non_coding_transcript_exon_variant 0.12
rrs 1473082 n.1237G>A non_coding_transcript_exon_variant 0.25
rrs 1473088 n.1243A>G non_coding_transcript_exon_variant 0.81
rrs 1473093 n.1248C>T non_coding_transcript_exon_variant 0.4
rrs 1473099 n.1254T>A non_coding_transcript_exon_variant 0.43
rrs 1473100 n.1255G>A non_coding_transcript_exon_variant 0.33
rrs 1473101 n.1256C>T non_coding_transcript_exon_variant 0.12
rrs 1473102 n.1257C>T non_coding_transcript_exon_variant 0.19
rrs 1473104 n.1259C>T non_coding_transcript_exon_variant 0.31
rrs 1473105 n.1260G>A non_coding_transcript_exon_variant 0.44
rrs 1473110 n.1265T>G non_coding_transcript_exon_variant 0.75
rrs 1473111 n.1266A>G non_coding_transcript_exon_variant 0.75
rrs 1473115 n.1270G>T non_coding_transcript_exon_variant 0.19
rrs 1473121 n.1276T>C non_coding_transcript_exon_variant 0.78
rrs 1473123 n.1278A>T non_coding_transcript_exon_variant 0.53
rrs 1473129 n.1284C>T non_coding_transcript_exon_variant 0.39
rrs 1473130 n.1285G>A non_coding_transcript_exon_variant 0.17
rrs 1473145 n.1300C>T non_coding_transcript_exon_variant 0.86
rrs 1473166 n.1321G>A non_coding_transcript_exon_variant 0.91
rrs 1473288 n.1443C>T non_coding_transcript_exon_variant 0.56
rrs 1473290 n.1445C>T non_coding_transcript_exon_variant 0.45
rrs 1473291 n.1446G>T non_coding_transcript_exon_variant 0.45
rrl 1473731 n.74T>A non_coding_transcript_exon_variant 0.33
rrl 1473746 n.89T>C non_coding_transcript_exon_variant 0.43
rrl 1473756 n.99G>T non_coding_transcript_exon_variant 0.38
rrl 1473758 n.101G>T non_coding_transcript_exon_variant 0.38
rrl 1473770 n.113T>G non_coding_transcript_exon_variant 0.38
rrl 1473806 n.149C>T non_coding_transcript_exon_variant 0.5
rrl 1473812 n.155G>A non_coding_transcript_exon_variant 0.5
rrl 1473814 n.157A>T non_coding_transcript_exon_variant 0.5
rrl 1473815 n.158T>G non_coding_transcript_exon_variant 0.5
rrl 1473829 n.172G>C non_coding_transcript_exon_variant 0.67
rrl 1473831 n.174G>T non_coding_transcript_exon_variant 0.6
rrl 1473832 n.175C>T non_coding_transcript_exon_variant 0.6
rrl 1473839 n.182G>A non_coding_transcript_exon_variant 0.6
rrl 1473876 n.219G>A non_coding_transcript_exon_variant 0.6
rrl 1473887 n.230T>C non_coding_transcript_exon_variant 0.5
rrl 1474496 n.839C>G non_coding_transcript_exon_variant 1.0
rrl 1474497 n.840G>C non_coding_transcript_exon_variant 1.0
rrl 1474506 n.849C>G non_coding_transcript_exon_variant 1.0
rrl 1474507 n.850G>C non_coding_transcript_exon_variant 1.0
rrl 1474626 n.969T>C non_coding_transcript_exon_variant 0.67
rrl 1474632 n.975G>T non_coding_transcript_exon_variant 0.67
rrl 1474636 n.979A>T non_coding_transcript_exon_variant 0.5
rrl 1474637 n.980C>T non_coding_transcript_exon_variant 0.5
rrl 1474638 n.981C>A non_coding_transcript_exon_variant 0.5
rrl 1474639 n.982G>T non_coding_transcript_exon_variant 0.5
rrl 1474640 n.983C>T non_coding_transcript_exon_variant 0.5
rrl 1475202 n.1545G>C non_coding_transcript_exon_variant 1.0
rrl 1475209 n.1552G>A non_coding_transcript_exon_variant 1.0
rrl 1475213 n.1556C>T non_coding_transcript_exon_variant 1.0
rrl 1475220 n.1563G>T non_coding_transcript_exon_variant 0.75
rrl 1475406 n.1749T>G non_coding_transcript_exon_variant 1.0
rrl 1475429 n.1772G>A non_coding_transcript_exon_variant 0.83
rrl 1475443 n.1786G>A non_coding_transcript_exon_variant 0.86
rrl 1475452 n.1795C>A non_coding_transcript_exon_variant 0.88
rrl 1475475 n.1818C>T non_coding_transcript_exon_variant 0.88
rrl 1475479 n.1822C>T non_coding_transcript_exon_variant 0.88
rrl 1475480 n.1823A>T non_coding_transcript_exon_variant 0.88
rrl 1475505 n.1848G>A non_coding_transcript_exon_variant 0.88
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 1.0
rrl 1475531 n.1874C>T non_coding_transcript_exon_variant 1.0
rrl 1475649 n.1992A>G non_coding_transcript_exon_variant 0.75
rrl 1475659 n.2002G>A non_coding_transcript_exon_variant 0.75
rrl 1475760 n.2105_2106delGC non_coding_transcript_exon_variant 1.0
rrl 1475764 n.2107A>T non_coding_transcript_exon_variant 1.0
rrl 1475765 n.2108A>T non_coding_transcript_exon_variant 1.0
rrl 1475774 n.2117C>G non_coding_transcript_exon_variant 0.17
rrl 1475953 n.2296A>G non_coding_transcript_exon_variant 0.18
rrl 1475975 n.2318C>T non_coding_transcript_exon_variant 0.7
rrl 1475977 n.2320A>G non_coding_transcript_exon_variant 0.67
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.62
rrl 1475989 n.2332T>C non_coding_transcript_exon_variant 0.62
rrl 1475993 n.2336C>T non_coding_transcript_exon_variant 0.62
rrl 1475997 n.2340A>T non_coding_transcript_exon_variant 0.62
rrl 1476160 n.2503T>C non_coding_transcript_exon_variant 0.67
rrl 1476214 n.2557G>T non_coding_transcript_exon_variant 0.5
rrl 1476215 n.2558C>T non_coding_transcript_exon_variant 0.5
rrl 1476221 n.2564T>C non_coding_transcript_exon_variant 0.43
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.43
rrl 1476260 n.2603A>G non_coding_transcript_exon_variant 0.4
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 0.42
rrl 1476295 n.2638C>T non_coding_transcript_exon_variant 0.42
rrl 1476297 n.2640C>T non_coding_transcript_exon_variant 0.45
rrl 1476299 n.2642C>T non_coding_transcript_exon_variant 0.45
rrl 1476311 n.2654G>A non_coding_transcript_exon_variant 0.5
rrl 1476359 n.2702C>G non_coding_transcript_exon_variant 0.29
rrl 1476381 n.2724G>C non_coding_transcript_exon_variant 0.58
rrl 1476428 n.2771C>T non_coding_transcript_exon_variant 0.61
rrl 1476429 n.2772A>C non_coding_transcript_exon_variant 0.56
rrl 1476466 n.2809C>T non_coding_transcript_exon_variant 0.47
rrl 1476481 n.2824T>C non_coding_transcript_exon_variant 0.21
rrl 1476506 n.2849T>C non_coding_transcript_exon_variant 0.17
rrl 1476584 n.2927C>T non_coding_transcript_exon_variant 0.39
rrl 1476594 n.2937C>T non_coding_transcript_exon_variant 0.41
rrl 1476597 n.2940G>A non_coding_transcript_exon_variant 0.38
rrl 1476603 n.2946G>A non_coding_transcript_exon_variant 0.31
rrl 1476608 n.2951C>G non_coding_transcript_exon_variant 0.29
rrl 1476619 n.2962C>T non_coding_transcript_exon_variant 0.25
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 0.24
rrl 1476665 n.3008T>A non_coding_transcript_exon_variant 0.25
rrl 1476666 n.3009C>T non_coding_transcript_exon_variant 0.23
rrl 1476674 n.3017T>C non_coding_transcript_exon_variant 0.23
rrl 1476684 n.3027C>T non_coding_transcript_exon_variant 0.14
rpsA 1833589 c.48A>C synonymous_variant 0.12
rpsA 1833595 c.54T>G synonymous_variant 0.12
rpsA 1833596 p.Ser19Ala missense_variant 0.12
rpsA 1833604 c.63C>T synonymous_variant 0.13
rpsA 1833616 c.75A>T synonymous_variant 0.14
rpsA 1833619 c.78A>C synonymous_variant 0.14
rpsA 1833625 c.84A>G synonymous_variant 0.16
rpsA 1833661 c.120A>G synonymous_variant 0.12
rpsA 1833664 c.123C>G synonymous_variant 0.13
rpsA 1833709 c.168C>T synonymous_variant 0.24
rpsA 1833724 c.183C>T synonymous_variant 0.18
rpsA 1833727 c.186G>C synonymous_variant 0.18
rpsA 1833733 c.192C>G synonymous_variant 0.18
rpsA 1833734 p.Ala65Ser missense_variant 0.18
rpsA 1833748 c.207C>G synonymous_variant 0.2
rpsA 1833751 c.210C>T synonymous_variant 0.22
rpsA 1833760 c.219C>T synonymous_variant 0.22
rpsA 1833787 c.246C>G synonymous_variant 0.26
rpsA 1833790 c.249T>C synonymous_variant 0.26
rpsA 1833802 c.261A>G synonymous_variant 0.19
rpsA 1833811 c.270G>C synonymous_variant 0.2
rpsA 1833829 c.288A>G synonymous_variant 0.25
rpsA 1833832 c.291G>A synonymous_variant 0.27
rpsA 1833838 c.297G>T synonymous_variant 0.25
rpsA 1833841 c.300C>G synonymous_variant 0.27
rpsA 1833847 c.306C>G synonymous_variant 0.33
rpsA 1833856 c.315A>G synonymous_variant 0.31
rpsA 1833862 c.321G>T synonymous_variant 0.32
rpsA 1833874 c.333T>G synonymous_variant 0.28
rpsA 1833886 c.345C>G synonymous_variant 0.26
rpsA 1833892 c.351G>A synonymous_variant 0.26
rpsA 1833894 p.Ala118Glu missense_variant 0.27
rpsA 1833928 c.387G>C synonymous_variant 0.22
rpsA 1833949 c.408T>C synonymous_variant 0.16
rpsA 1833970 c.429G>C synonymous_variant 0.17
rpsA 1833979 c.438T>C synonymous_variant 0.16
rpsA 1833991 c.450C>G synonymous_variant 0.17
rpsA 1834000 c.459G>C synonymous_variant 0.25
rpsA 1834009 c.468C>T synonymous_variant 0.25
rpsA 1834012 c.471G>T synonymous_variant 0.25
rpsA 1834015 c.474G>C synonymous_variant 0.25
rpsA 1834021 c.480C>T synonymous_variant 0.26
rpsA 1834030 c.489C>G synonymous_variant 0.28
rpsA 1834069 c.528G>C synonymous_variant 0.3
rpsA 1834073 p.Lys178Arg missense_variant 0.29
rpsA 1834097 c.556_557delTCinsAG synonymous_variant 0.18
rpsA 1834228 c.687C>A synonymous_variant 0.2
rpsA 1834231 c.690T>G synonymous_variant 0.19
rpsA 1834234 c.693G>T synonymous_variant 0.21
rpsA 1834240 c.699T>C synonymous_variant 0.21
rpsA 1834246 c.705G>T synonymous_variant 0.22
rpsA 1834249 c.708T>C synonymous_variant 0.23
rpsA 1834252 c.711C>G synonymous_variant 0.21
rpsA 1834261 c.720A>G synonymous_variant 0.23
rpsA 1834264 c.723G>C synonymous_variant 0.24
rpsA 1834297 c.756C>T synonymous_variant 0.25
rpsA 1834303 c.762T>G synonymous_variant 0.24
rpsA 1834306 c.765T>C synonymous_variant 0.19
rpsA 1834339 c.798C>T synonymous_variant 0.19
rpsA 1834348 c.807T>C synonymous_variant 0.2
rpsA 1834366 c.825A>G synonymous_variant 0.15
rpsA 1834375 c.834G>A synonymous_variant 0.16
rpsA 1834378 c.837T>C synonymous_variant 0.16
rpsA 1834489 c.948T>C synonymous_variant 0.13
rpsA 1834498 c.957C>T synonymous_variant 0.12
rpsA 1834520 p.Ala327Ser missense_variant 0.16
rpsA 1834528 c.987T>C synonymous_variant 0.17
rpsA 1834543 c.1002C>G synonymous_variant 0.14
rpsA 1834555 c.1014T>G synonymous_variant 0.13
rpsA 1834557 p.Ala339Gly missense_variant 0.11
tlyA 1917972 c.33A>G synonymous_variant 1.0
katG 2154724 p.Arg463Leu missense_variant 1.0
PPE35 2167926 p.Leu896Ser missense_variant 0.97
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0
pncA 2289047 c.195C>T synonymous_variant 1.0
pncA 2289365 c.-125delC upstream_gene_variant 1.0
ahpC 2726105 c.-88G>A upstream_gene_variant 1.0
ahpC 2726636 c.444G>C synonymous_variant 0.12
ahpC 2726645 c.453C>G synonymous_variant 0.13
ahpC 2726657 c.465A>C synonymous_variant 0.14
ahpC 2726669 c.477T>C synonymous_variant 0.16
ahpC 2726675 c.483A>G synonymous_variant 0.16
ahpC 2726678 c.486G>C synonymous_variant 0.16
ahpC 2726681 c.489A>C synonymous_variant 0.17
ahpC 2726693 c.501C>G synonymous_variant 0.16
ahpC 2726696 c.504C>G synonymous_variant 0.15
ahpC 2726717 c.525A>C synonymous_variant 0.13
ald 3086788 c.-32T>C upstream_gene_variant 1.0
fprA 3473996 c.-11_-10insA upstream_gene_variant 1.0
alr 3841473 c.-53G>A upstream_gene_variant 1.0
rpoA 3877656 c.852T>G synonymous_variant 0.11
rpoA 3877743 c.765T>C synonymous_variant 0.12
rpoA 3877752 p.Asp252Glu missense_variant 0.12
rpoA 3877818 c.690A>G synonymous_variant 0.16
rpoA 3877839 c.669G>T synonymous_variant 0.18
rpoA 3877848 c.660C>T synonymous_variant 0.16
rpoA 3877856 c.652T>C synonymous_variant 0.15
rpoA 3877860 c.648C>T synonymous_variant 0.16
rpoA 3877875 c.633T>C synonymous_variant 0.19
rpoA 3877881 c.627G>C synonymous_variant 0.18
rpoA 3877887 c.621G>C synonymous_variant 0.15
rpoA 3877893 c.615C>T synonymous_variant 0.12
rpoA 3877900 p.Ser203Thr missense_variant 0.14
rpoA 3877905 c.603A>G synonymous_variant 0.15
rpoA 3877908 c.600T>C synonymous_variant 0.14
rpoA 3878070 c.438T>C synonymous_variant 0.15
rpoA 3878079 c.429C>T synonymous_variant 0.16
rpoA 3878082 c.426T>C synonymous_variant 0.16
rpoA 3878102 p.Val136Ile missense_variant 0.17
rpoA 3878103 c.405A>G synonymous_variant 0.17
rpoA 3878118 c.390T>C synonymous_variant 0.17
rpoA 3878127 c.381G>C synonymous_variant 0.16
rpoA 3878130 c.378C>G synonymous_variant 0.18
rpoA 3878143 p.Gly122Asp missense_variant 0.21
rpoA 3878160 c.348C>G synonymous_variant 0.2
rpoA 3878169 c.339G>C synonymous_variant 0.21
rpoA 3878175 c.333G>T synonymous_variant 0.2
rpoA 3878184 c.324C>T synonymous_variant 0.18
rpoA 3878193 c.315T>C synonymous_variant 0.18
rpoA 3878196 p.Glu104Ala missense_variant 0.18
rpoA 3878205 c.303T>A synonymous_variant 0.17
rpoA 3878217 c.291A>G synonymous_variant 0.19
rpoA 3878259 c.249G>C synonymous_variant 0.16
rpoA 3878271 c.237T>C synonymous_variant 0.16
rpoA 3878274 c.234G>C synonymous_variant 0.15
rpoA 3878283 p.Glu75Asp missense_variant 0.16
rpoA 3878292 c.216T>C synonymous_variant 0.17
rpoA 3878298 c.210A>G synonymous_variant 0.17
rpoA 3878301 c.207C>G synonymous_variant 0.18
rpoA 3878310 c.198G>T synonymous_variant 0.18
rpoA 3878313 c.195G>C synonymous_variant 0.18
rpoA 3878322 c.186A>G synonymous_variant 0.13
rpoA 3878331 c.177A>G synonymous_variant 0.12
rpoA 3878337 c.171T>C synonymous_variant 0.12
rpoA 3878346 c.162T>C synonymous_variant 0.12
rpoA 3878364 c.144A>C synonymous_variant 0.12
rpoA 3878367 c.141C>G synonymous_variant 0.12
rpoA 3878370 c.138T>C synonymous_variant 0.12
rpoA 3878373 c.135G>C synonymous_variant 0.12
rpoA 3878567 c.-60C>G upstream_gene_variant 0.25
clpC1 4038584 c.2121G>T synonymous_variant 0.13
clpC1 4038587 c.2118C>G synonymous_variant 0.13
clpC1 4038602 c.2103G>C synonymous_variant 0.11
clpC1 4038941 c.1764G>C synonymous_variant 0.11
clpC1 4038953 c.1752A>G synonymous_variant 0.2
clpC1 4038956 c.1749T>C synonymous_variant 0.2
clpC1 4038965 c.1740T>C synonymous_variant 0.22
clpC1 4038971 c.1734T>C synonymous_variant 0.23
clpC1 4038974 c.1731T>C synonymous_variant 0.24
clpC1 4038989 c.1716T>C synonymous_variant 0.29
clpC1 4038997 c.1708T>C synonymous_variant 0.27
clpC1 4039100 c.1605C>G synonymous_variant 0.13
clpC1 4039106 c.1599G>C synonymous_variant 0.12
clpC1 4039112 c.1593C>G synonymous_variant 0.13
clpC1 4039118 c.1587C>G synonymous_variant 0.14
clpC1 4039121 c.1584T>C synonymous_variant 0.13
clpC1 4039136 c.1569C>T synonymous_variant 0.19
clpC1 4039139 c.1566G>A synonymous_variant 0.19
clpC1 4039142 c.1563A>G synonymous_variant 0.19
clpC1 4039145 c.1560G>C synonymous_variant 0.2
clpC1 4039166 c.1539G>A synonymous_variant 0.21
clpC1 4039169 c.1536A>G synonymous_variant 0.21
clpC1 4039172 c.1533A>G synonymous_variant 0.2
clpC1 4039178 c.1527G>C synonymous_variant 0.23
clpC1 4039183 c.1522T>C synonymous_variant 0.23
clpC1 4039190 c.1515C>T synonymous_variant 0.24
clpC1 4039196 c.1509G>A synonymous_variant 0.19
clpC1 4039199 p.Ala502Glu missense_variant 0.16
clpC1 4039208 c.1497C>G synonymous_variant 0.17
clpC1 4039220 c.1485G>C synonymous_variant 0.27
clpC1 4039265 c.1440C>T synonymous_variant 0.25
clpC1 4039274 c.1431G>C synonymous_variant 0.22
clpC1 4039277 c.1428C>G synonymous_variant 0.22
clpC1 4039280 c.1425G>T synonymous_variant 0.22
clpC1 4039283 c.1422C>T synonymous_variant 0.2
clpC1 4039286 c.1419T>G synonymous_variant 0.22
clpC1 4039292 c.1413C>T synonymous_variant 0.25
clpC1 4039316 p.Glu463Asp missense_variant 0.18
clpC1 4039319 c.1386T>A synonymous_variant 0.14
clpC1 4039322 c.1383T>G synonymous_variant 0.14
clpC1 4039328 c.1377A>C synonymous_variant 0.13
clpC1 4039360 p.Ser449Arg missense_variant 0.13
clpC1 4039361 c.1344C>G synonymous_variant 0.12
clpC1 4039430 c.1275T>C synonymous_variant 0.19
clpC1 4039442 c.1263A>G synonymous_variant 0.18
clpC1 4039451 c.1254G>A synonymous_variant 0.12
clpC1 4039517 c.1188C>G synonymous_variant 0.12
clpC1 4039586 c.1119G>C synonymous_variant 0.22
clpC1 4039589 c.1116G>C synonymous_variant 0.21
clpC1 4039610 c.1095G>C synonymous_variant 0.28
clpC1 4039616 c.1089G>C synonymous_variant 0.27
clpC1 4039622 c.1083C>T synonymous_variant 0.31
clpC1 4039649 c.1056G>T synonymous_variant 0.35
clpC1 4039652 c.1053G>C synonymous_variant 0.39
clpC1 4039685 c.1020C>T synonymous_variant 0.46
clpC1 4039694 c.1011G>C synonymous_variant 0.47
clpC1 4039724 c.981A>G synonymous_variant 0.45
clpC1 4039733 c.972G>C synonymous_variant 0.46
clpC1 4039739 c.966C>G synonymous_variant 0.4
clpC1 4039751 c.954A>G synonymous_variant 0.41
clpC1 4039757 c.948A>G synonymous_variant 0.34
clpC1 4039760 c.945T>C synonymous_variant 0.31
clpC1 4039766 c.939T>C synonymous_variant 0.28
clpC1 4039769 c.936C>G synonymous_variant 0.28
clpC1 4039775 c.930G>C synonymous_variant 0.28
clpC1 4039778 c.927A>G synonymous_variant 0.27
clpC1 4039787 c.918G>C synonymous_variant 0.26
clpC1 4039793 c.912C>G synonymous_variant 0.27
clpC1 4039805 c.900C>T synonymous_variant 0.2
clpC1 4039814 c.891C>G synonymous_variant 0.19
clpC1 4039817 c.888A>C synonymous_variant 0.16
clpC1 4039820 c.885T>G synonymous_variant 0.16
clpC1 4039831 c.874T>C synonymous_variant 0.19
clpC1 4039844 c.861C>T synonymous_variant 0.23
clpC1 4039850 c.855T>C synonymous_variant 0.25
clpC1 4039865 c.840T>C synonymous_variant 0.27
clpC1 4039904 c.801A>G synonymous_variant 0.25
clpC1 4039907 c.798G>A synonymous_variant 0.24
clpC1 4039931 c.774T>C synonymous_variant 0.18
clpC1 4039934 c.771G>C synonymous_variant 0.16
clpC1 4039943 c.762G>C synonymous_variant 0.16
clpC1 4039946 c.759A>G synonymous_variant 0.12
clpC1 4039949 c.756G>C synonymous_variant 0.14
clpC1 4039952 c.753T>C synonymous_variant 0.2
clpC1 4039958 c.747G>C synonymous_variant 0.21
clpC1 4039964 c.741C>G synonymous_variant 0.2
clpC1 4039975 p.Asp244Asn missense_variant 0.21
clpC1 4039979 c.726C>G synonymous_variant 0.2
clpC1 4039982 c.723G>A synonymous_variant 0.21
clpC1 4040000 c.705C>T synonymous_variant 0.21
clpC1 4040021 c.684A>C synonymous_variant 0.21
clpC1 4040024 c.681A>G synonymous_variant 0.19
clpC1 4040033 c.672G>C synonymous_variant 0.22
clpC1 4040042 c.663C>T synonymous_variant 0.25
clpC1 4040057 c.648C>T synonymous_variant 0.23
clpC1 4040087 c.618G>T synonymous_variant 0.17
clpC1 4040090 c.613_615delTCTinsAGC synonymous_variant 0.16
clpC1 4040093 c.612C>G synonymous_variant 0.16
clpC1 4040126 c.579C>T synonymous_variant 0.14
embC 4242075 p.Arg738Gln missense_variant 1.0
embA 4242643 c.-590C>T upstream_gene_variant 1.0
ethA 4326090 c.1384C>T synonymous_variant 1.0
whiB6 4338595 c.-75delG upstream_gene_variant 1.0
gid 4407588 c.615A>G synonymous_variant 1.0