Rv3696c - c.1227G>C


Drug resistance types
32 Sensitive 5 RR-TB 26 HR-TB 11 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 36 Other
lineage Counts
lineage Count
lineage4.9 62
2
lineage4.3.2.1 1
lineage2.2.1 3
lineage2.1 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.1.2.1 3
La1.7;lineage4.9 4
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage4.5 1
lineage2.2 1
lineage4.3.4 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.7;lineage3.1;lineage4 1
lineage3.1.2.2 1
lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
lineage4.4.1.2 1
lineage4.9;lineage7 3
La1.7;lineage4.9;lineage7 3
La1.6;lineage4 1
lineage1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 1
La3;lineage4.9 1
La1.7;lineage4.9;lineage6 1
lineage4.1;lineage4.9 1
La1.7.X-unk4;lineage4.9 1
La2;lineage2.2 1
lineage4.1.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage4 1
La3;lineage4.3.4 1
La1.7.1;La1.7.X-unk4 1
M.canetti;lineage1 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage3 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 112
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR736856 Sensitive lineage4.9 None
ERR363437 Sensitive lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR6789626 Other None
SRR14801749 HR-TB lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR161037 Other lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR349299 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6046245 Other lineage4.9 None
ERR751326 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR6866639 Other lineage4.9 None
SRR29096150 Other lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR6045706 Sensitive lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR7131023 Other lineage4.1.2.1 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR369159 Sensitive lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR926165 Sensitive lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
ERR2693252 Sensitive lineage4.9 None
ERR369162 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4811031 Sensitive lineage4.5 None
ERR4810624 MDR-TB lineage2.2 None
ERR736817 HR-TB lineage4.3.4 None
ERR387051 Other lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR3283030 HR-TB lineage4.9 None
ERR373945 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR363449 Sensitive lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR29096174 Sensitive La1.7;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR3283021 HR-TB lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR926164 Other lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR176751 Other lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR373947 Other lineage4.9 None
ERR349266 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR10808730 Other lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR9786604 Other None
SRR28351554 Sensitive La1.6;lineage4 None
ERR6866807 Other lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
ERR181744 HR-TB La3;lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR137286 Other lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR369158 Other lineage4.9 None
ERR502511 Sensitive lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR9119669 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR363506 Sensitive lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR2027263 Other lineage4 None
ERR212123 Other lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR15014655 Other M.canetti;lineage1 None
SRR29231479 RR-TB lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR6045371 Other lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR8217918 HR-TB lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR363456 Sensitive lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
SRR6046382 Sensitive lineage2.2.1 None
SRR29096410 Other lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR363453 Sensitive lineage4.9 None
ERR4817998 Other lineage3 None
ERR369163 Sensitive lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR702405 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
ERR736848 Other lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None