Rv0682 - c.318T>A


Drug resistance types
68 Sensitive 4 RR-TB 12 HR-TB 11 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 50 Other
lineage Counts
lineage Count
lineage4.3.1;lineage4.9;lineage6 1
lineage4.6.3;lineage4.9 1
lineage4.1.2.1 4
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.9 75
lineage3 2
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
1
lineage3;lineage4.9 1
lineage1.1.1;lineage4 1
lineage2.2.1 7
lineage5.1.4 1
La1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage1;lineage4.9 1
lineage4.9;lineage6.1.3 1
lineage2.2.1.2;lineage7 1
lineage4.5 2
lineage4.3.4.2.1 1
lineage4 5
lineage4.3.3 2
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
La1.2 1
lineage4.1;lineage4.9 2
lineage4.4.1.1 1
lineage4.1.1.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.9;lineage7 1
La3;lineage2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage4.6.4;lineage4.9 2
lineage2.2 2
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.2 1
lineage4.6.4;lineage4.9 1
lineage4.1.1.3;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.2.1 1
lineage4.2.1.1;lineage4.3.3 1
lineage2.2.1;lineage4 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
spoligotype Counts
spoligotype Count
None 145
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR363490 Sensitive lineage4.9 None
ERR349300 Sensitive lineage4.9 None
ERR363479 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
SRR6046492 Other lineage4.9 None
ERR349265 Other lineage4.9 None
ERR373945 Sensitive lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
SRR26399490 Sensitive lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR363449 Sensitive lineage4.9 None
SRR6046245 Other lineage4.9 None
ERR2514552 Sensitive lineage3 None
ERR400336 Sensitive lineage4.9 None
ERR363499 Sensitive lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
SRR6046564 Sensitive lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR349266 Sensitive lineage4.9 None
SRR12708416 Sensitive None
SRR5341396 Other lineage3;lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR2513283 Sensitive lineage5.1.4 None
ERR363456 Sensitive lineage4.9 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR752229 Other lineage4.5 None
ERR4811030 Sensitive lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
ERR3275450 Other lineage4 None
SRR12708409 HR-TB lineage4.3.3 None
SRR3675580 Sensitive lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR5341296 Sensitive lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675210 Sensitive lineage4.9 None
SRR3675292 Sensitive lineage4.9 None
ERR4769427 Other La1.2 None
ERR363506 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR3675577 Sensitive lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
ERR4814396 Sensitive lineage4.1.1.3 None
ERR400326 Other lineage4.9 None
SRR3675318 Other lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR363509 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
ERR363447 Other lineage4.9 None
ERR373947 Other lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR2517475 Other lineage4 None
ERR3283055 HR-TB lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR369162 Other lineage4.9 None
ERR363453 Sensitive lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR4817998 Other lineage3 None
SRR20969708 HR-TB lineage2.2 None
ERR4178309 Other lineage4.1.2.1 None
SRR20969731 Other lineage2.2.1 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
ERR363421 Sensitive lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR363474 Sensitive lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR1175508 Sensitive lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
ERR349299 Other lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR2446382 Other lineage4 None
SRR12708372 Sensitive lineage4.9 None
ERR4812155 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR363502 Other lineage4.9 None
SRR3675247 Other lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
ERR373946 Sensitive lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR349296 Sensitive lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR12708419 Other lineage4.3.3 None
ERR369159 Sensitive lineage4.9 None
ERR349264 Sensitive lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR363446 Sensitive lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR6045503 Sensitive lineage4.9 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR363500 Sensitive lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
SRR6046611 Sensitive lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR369163 Sensitive lineage4.9 None
ERR369158 Other lineage4.9 None
ERR363498 Sensitive lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None