Rv1630 - c.471G>T
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
101 Sensitive
5 RR-TB
39 HR-TB
12 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
54 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 135 |
| lineage2.2.1 | 17 |
| La1.7;lineage4.9;lineage7 | 3 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La1.8.1 | 2 |
| La1.7;lineage4.9 | 2 |
| lineage1;lineage4.9 | 1 |
| lineage3.1.3 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.6.2.2 | 1 |
| lineage4.3.2.1 | 2 |
| lineage3 | 5 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1;lineage4.9 | 2 |
| lineage4 | 4 |
| lineage4.4.1.1.1 | 1 |
| La1.7.1;lineage4.9 | 1 |
| La1.7.1 | 1 |
| lineage4.1.2 | 2 |
| lineage2.2.1;lineage4 | 2 |
| lineage4.8;lineage4.9 | 2 |
| lineage2.1 | 1 |
| lineage1.1.1 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.1.2.1 | 5 |
| La1.2 | 1 |
| lineage4.1.1.1 | 2 |
| lineage4.1.1.2 | 1 |
| lineage1.1.2 | 2 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.2.1 | 1 |
| lineage3.1.1 | 1 |
| lineage4.4.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| 1 | |
| lineage4.8 | 2 |
| La1;lineage2;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.3 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 221 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR349264 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1158918 | Sensitive | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR6044875 | Sensitive | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR6046839 | Other | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR5341400 | Sensitive | lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR1791747 | Other | La1.8.1 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | SRR5341293 | Sensitive | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR349265 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR5341366 | Sensitive | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR4816470 | HR-TB | lineage3 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11462861 | Other | La1.8.1 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR1196545 | Sensitive | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814976 | Other | lineage4.9 | None | ERR4799378 | Sensitive | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR5341308 | Sensitive | lineage4.9 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR323085 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR28351408 | Pre-XDR-TB | lineage2.2.1;lineage4 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR1140724 | Other | lineage2.2.1 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1173568 | Sensitive | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4816852 | Other | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR6046802 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4.9 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4817998 | Other | lineage3 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR363447 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR1180996 | Sensitive | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR7535082 | Sensitive | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR1063896 | Sensitive | None | ERR502511 | Sensitive | lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR6358979 | Other | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | ERR363437 | Sensitive | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4821655 | HR-TB | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR5341303 | Sensitive | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | SRR5341453 | Other | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | SRR15315797 | RR-TB | lineage2.2.1;lineage4 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR363502 | Other | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None |
|---|
