SRR6045050
|
Sensitive
|
lineage4.3.2.1
|
None
|
SRR13861341
|
RR-TB
|
lineage4.9
|
None
|
ERR473332
|
Other
|
lineage4.9
|
None
|
SRR5341465
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR3675488
|
Other
|
La1.7;lineage4.9
|
None
|
ERR11465711
|
Other
|
lineage1.2.2.1;lineage4.4.1.1
|
None
|
SRR6045706
|
Sensitive
|
lineage4.9
|
None
|
SRR6044819
|
Sensitive
|
lineage4.9
|
None
|
ERR11488822
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.1.2.1
|
None
|
ERR373947
|
Other
|
lineage4.9
|
None
|
SRR5341467
|
Other
|
lineage4.9
|
None
|
ERR400538
|
RR-TB
|
lineage5.1.2
|
None
|
SRR8758877
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR9971080
|
RR-TB
|
lineage2.2.1
|
None
|
ERR502470
|
RR-TB
|
lineage4.9
|
None
|
ERR11465189
|
RR-TB
|
lineage4.9.1
|
None
|
ERR349266
|
Sensitive
|
lineage4.9
|
None
|
ERR373946
|
Sensitive
|
lineage4.9
|
None
|
ERR212125
|
HR-TB
|
lineage4.9
|
None
|
SRR5341418
|
Other
|
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7
|
None
|
ERR7821163
|
Other
|
lineage2.2.1
|
None
|
SRR9971112
|
Other
|
lineage2.2.1
|
None
|
SRR13861506
|
RR-TB
|
lineage4.9
|
None
|
SRR1180147
|
Other
|
lineage2.2.1.1
|
None
|
ERR1023502
|
MDR-TB
|
lineage2;lineage4
|
None
|
SRR6079962
|
HR-TB
|
lineage2.2.1.1
|
None
|
SRR12708416
|
Sensitive
|
|
None
|
SRR1196478
|
Other
|
lineage4.9
|
None
|
SRR5341396
|
Other
|
lineage3;lineage4.9
|
None
|
ERR4796929
|
Sensitive
|
lineage4.9
|
None
|
ERR4798262
|
HR-TB
|
La1.2.BCG
|
None
|
ERR2513121
|
Sensitive
|
lineage3.1.3
|
None
|
SRR1915487
|
Other
|
La1.2.BCG
|
None
|
ERR4819863
|
RR-TB
|
lineage4.9
|
None
|
ERR4024991
|
Other
|
lineage4.8;lineage4.9
|
None
|
ERR473334
|
HR-TB
|
lineage4.9
|
None
|
SRR1180996
|
Sensitive
|
lineage4.9
|
None
|
ERR6359070
|
Sensitive
|
lineage4.9
|
None
|
SRR1735598
|
RR-TB
|
lineage4.9
|
None
|
SRR6046196
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
SRR20632814
|
Sensitive
|
lineage4.9
|
None
|
ERR4818536
|
Other
|
lineage4.9
|
None
|
ERR5917985
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4819462
|
Sensitive
|
lineage4.9
|
None
|
ERR7911670
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
SRR19295647
|
Sensitive
|
lineage4.9
|
None
|
SRR6832787
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2514821
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4188322
|
Other
|
lineage4.6.4;lineage4.9
|
None
|
ERR4797474
|
Sensitive
|
lineage4.9
|
None
|
ERR736835
|
HR-TB
|
La1.7;M.canetti;lineage4.9
|
None
|
SRR9971270
|
RR-TB
|
lineage2.2.1
|
None
|
ERR926165
|
Sensitive
|
lineage4.9
|
None
|
SRR11349145
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR4769530
|
RR-TB
|
lineage4.9
|
None
|
ERR133986
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
|
None
|
ERR867570
|
RR-TB
|
lineage4.9
|
None
|
SRR1049725
|
Other
|
lineage4.1.2.1;lineage4.4.1
|
None
|
ERR1063858
|
HR-TB
|
lineage4.9
|
None
|
SRR7236177
|
Other
|
La1.8.1
|
None
|
ERR3283042
|
Other
|
lineage4.9
|
None
|
SRR1180137
|
Other
|
lineage2.2.1
|
None
|
ERR4816762
|
Sensitive
|
lineage4.9
|
None
|
SRR18002874
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR323066
|
Sensitive
|
lineage4.9
|
None
|
ERR6866547
|
Other
|
La1.7;lineage4.9;lineage6
|
None
|
ERR3283040
|
HR-TB
|
lineage4.9
|
None
|
ERR369162
|
Other
|
lineage4.9
|
None
|
SRR6046611
|
Sensitive
|
lineage4.9
|
None
|
ERR736872
|
HR-TB
|
lineage4.9
|
None
|
ERR4798431
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
ERR4811031
|
Sensitive
|
lineage4.5
|
None
|
SRR12708414
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28351347
|
Other
|
lineage3
|
None
|
SRR1181403
|
Other
|
lineage4.9
|
None
|
ERR4769417
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR867542
|
HR-TB
|
lineage4.2.1.1;lineage4.3.3
|
None
|
SRR6046460
|
MDR-TB
|
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
|
None
|
SRR1175496
|
Sensitive
|
lineage4.9
|
None
|
ERR369151
|
Other
|
lineage4.9
|
None
|
SRR12708409
|
HR-TB
|
lineage4.3.3
|
None
|
ERR4829196
|
Other
|
lineage4.1.2
|
None
|
ERR473323
|
HR-TB
|
lineage4.9
|
None
|
ERR502474
|
RR-TB
|
lineage4.9
|
None
|
ERR9786592
|
Other
|
lineage4.3.4.2
|
None
|
SRR9970980
|
HR-TB
|
lineage4.1.2
|
None
|
SRR1791747
|
Other
|
La1.8.1
|
None
|
SRR3675550
|
RR-TB
|
M.canetti;lineage4.2;lineage4.9
|
None
|
SRR3675492
|
Other
|
La1.7;lineage4.9
|
None
|
SRR10315466
|
RR-TB
|
lineage2.2.1
|
None
|
ERR4178309
|
Other
|
lineage4.1.2.1
|
None
|
ERR9896144
|
Other
|
lineage3
|
None
|
ERR2513259
|
Other
|
lineage3
|
None
|
ERR11465833
|
Sensitive
|
lineage4.3.2.1
|
None
|
SRR12708415
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4831617
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR736848
|
Other
|
lineage4.9
|
None
|
SRR6832178
|
HR-TB
|
lineage4.2.1.1
|
None
|
SRR12708418
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4799547
|
HR-TB
|
lineage2.2.1
|
None
|
SRR3675279
|
Sensitive
|
lineage4.9
|
None
|
ERR363421
|
Sensitive
|
lineage4.9
|
None
|
ERR4815550
|
Other
|
lineage2.2;lineage4.9
|
None
|
ERR369161
|
Sensitive
|
lineage4.9
|
None
|
ERR067712
|
Sensitive
|
lineage4.9
|
None
|
ERR4798099
|
Other
|
lineage4.9
|
None
|
SRR5341293
|
Sensitive
|
lineage4.9
|
None
|
SRR5341425
|
Other
|
lineage4.9
|
None
|
ERR4831616
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5341345
|
Sensitive
|
lineage4.9
|
None
|
ERR4816964
|
Sensitive
|
lineage4.9
|
None
|
ERR9786526
|
Other
|
lineage4.1;lineage4.8
|
None
|
ERR363437
|
Sensitive
|
lineage4.9
|
None
|
SRR12708374
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
SRR12708398
|
Sensitive
|
lineage4.4.1.1
|
None
|
SRR11342651
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR16156817
|
Other
|
lineage4.9
|
None
|
SRR29097058
|
Other
|
lineage4.9
|
None
|
ERR4817628
|
Sensitive
|
lineage4.8
|
gb
|
ERR405219
|
HR-TB
|
La1.7;lineage3.1;lineage4
|
None
|
SRR11342660
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9119525
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR4820043
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR4178226
|
Sensitive
|
lineage4
|
None
|
ERR4797184
|
Sensitive
|
lineage4.9
|
None
|
SAMN02380990
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR4872119
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR6359069
|
Sensitive
|
lineage4.9
|
None
|
SRR10315567
|
HR-TB
|
lineage2.2.1
|
None
|
SRR3675248
|
Other
|
lineage4.9
|
None
|
ERR502478
|
RR-TB
|
lineage4.9
|
None
|
ERR6359074
|
HR-TB
|
lineage4.9
|
None
|
SRR6046245
|
Other
|
lineage4.9
|
None
|
SRR13861284
|
RR-TB
|
lineage4.9
|
None
|
SRR12708392
|
Other
|
lineage2.2.1
|
None
|
SRR10808805
|
Other
|
La1;lineage4.9
|
None
|
SRR1049581
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR4815441
|
HR-TB
|
lineage4.9
|
None
|
ERR4798406
|
MDR-TB
|
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
|
None
|
SRR29231425
|
Sensitive
|
lineage4.9
|
None
|
ERR1023525
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR4596902
|
MDR-TB
|
lineage3
|
None
|
ERR926159
|
Sensitive
|
lineage4.9
|
None
|
ERR349298
|
Sensitive
|
lineage4.9
|
None
|
ERR990545
|
Other
|
lineage3
|
None
|
ERR4818958
|
Sensitive
|
lineage4.1.1.1
|
gb
|
SRR5341303
|
Sensitive
|
lineage4.9
|
None
|
ERR108471
|
HR-TB
|
lineage4.9
|
None
|
ERR212138
|
HR-TB
|
lineage4.9
|
None
|
SRR1172885
|
HR-TB
|
lineage4.9
|
None
|
SRR14802079
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR4596910
|
Sensitive
|
lineage4.9
|
None
|
ERR245794
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
ERR4816478
|
HR-TB
|
lineage4
|
None
|
ERR971389
|
Sensitive
|
lineage4.9
|
None
|
ERR1035122
|
Sensitive
|
lineage4.9
|
None
|
SRR7535047
|
RR-TB
|
lineage4.6.1.1
|
None
|
SRR13583478
|
HR-TB
|
lineage4.3.4.1
|
None
|
ERR158583
|
MDR-TB
|
La3;M.canetti;lineage2;lineage4.2;lineage4.3
|
None
|
ERR3797062
|
RR-TB
|
lineage4.9
|
None
|
ERR133825
|
HR-TB
|
La1;lineage4.9
|
None
|
ERR1023509
|
Other
|
lineage4.9
|
None
|
ERR1063849
|
HR-TB
|
lineage4.9
|
None
|
ERR926164
|
Other
|
lineage4.9
|
None
|
ERR8479578
|
Sensitive
|
lineage1.1.3.1
|
None
|
ERR4816656
|
Other
|
lineage4.9
|
None
|
SRR6046824
|
MDR-TB
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
ERR3445487
|
Other
|
La1.7.X-unk4
|
None
|
ERR9285979
|
RR-TB
|
lineage3.1.1
|
None
|
SRR12416840
|
MDR-TB
|
lineage4.9
|
None
|
SRR9971113
|
Other
|
lineage2.2.1
|
None
|
ERR363447
|
Other
|
lineage4.9
|
None
|
ERR323085
|
Sensitive
|
lineage4.9
|
None
|
ERR736834
|
Sensitive
|
lineage4.9
|
None
|
ERR5311094
|
HR-TB
|
lineage4.9
|
None
|
SRR5341315
|
Other
|
La1.7;lineage3;lineage4.9;lineage7
|
None
|
SRR6045892
|
Sensitive
|
lineage4.9
|
None
|
ERR3283018
|
HR-TB
|
lineage4.9
|
None
|
SRR5341299
|
HR-TB
|
lineage4.9
|
None
|
ERR4815815
|
Sensitive
|
lineage4.9
|
None
|
SRR6045233
|
Other
|
M.canetti;lineage4.9
|
None
|
ERR2513283
|
Sensitive
|
lineage5.1.4
|
None
|
SRR5341469
|
HR-TB
|
lineage4.9
|
None
|
ERR4815556
|
RR-TB
|
lineage3
|
None
|
ERR4797264
|
Sensitive
|
lineage4.9
|
None
|
ERR4831621
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR12708419
|
Other
|
lineage4.3.3
|
None
|
ERR363456
|
Sensitive
|
lineage4.9
|
None
|
SRR3675390
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
SRR5341387
|
Other
|
lineage4.9
|
None
|
ERR349264
|
Sensitive
|
lineage4.9
|
None
|
ERR369156
|
Sensitive
|
lineage4.9
|
None
|
ERR176778
|
HR-TB
|
lineage4.9
|
None
|
ERR349330
|
Sensitive
|
lineage4.9
|
None
|
ERR363446
|
Sensitive
|
lineage4.9
|
None
|
ERR3801503
|
Sensitive
|
lineage4.6.2.2
|
None
|
ERR926156
|
Sensitive
|
lineage4.9
|
None
|
SRR1181256
|
Other
|
lineage4.9
|
None
|
SRR12634609
|
MDR-TB
|
lineage3.1.1
|
None
|
ERR2513229
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR6866022
|
Other
|
lineage4.8;lineage4.9
|
None
|
ERR9786525
|
Other
|
lineage4.1;lineage4.8
|
None
|
SRR7496523
|
Other
|
lineage4.7
|
None
|
SRR1049726
|
Other
|
lineage4.1.2.1;lineage4.4.1.1
|
None
|
SRR11342693
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR3675510
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR2693252
|
Sensitive
|
lineage4.9
|
None
|
SRR6045503
|
Sensitive
|
lineage4.9
|
None
|
ERR4819809
|
HR-TB
|
lineage4.6.2.2
|
None
|
ERR4820112
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR3439432
|
Other
|
M.canetti;lineage4.6.4;lineage4.9
|
None
|
SRR3675505
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
ERR4797350
|
Sensitive
|
lineage1;lineage4.9
|
None
|
ERR323062
|
Sensitive
|
lineage4.9
|
None
|
ERR926155
|
Sensitive
|
lineage4.9
|
None
|
ERR4819314
|
Other
|
lineage1.1.1
|
None
|
ERR4819241
|
Other
|
lineage4.9
|
None
|
SRR1140712
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR1158918
|
Sensitive
|
lineage4.9
|
None
|
ERR176651
|
Other
|
lineage4.9
|
None
|
ERR4818929
|
HR-TB
|
lineage4.9
|
None
|
ERR137286
|
Other
|
lineage4.9
|
None
|
ERR2513724
|
Sensitive
|
lineage4.3.2.1
|
None
|
ERR4769444
|
HR-TB
|
lineage4.9
|
None
|
SRR10808668
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6045359
|
Sensitive
|
lineage4.9
|
None
|
ERR4811030
|
Sensitive
|
lineage4.9
|
None
|
SRR1175052
|
HR-TB
|
lineage4.9
|
None
|
ERR4769439
|
HR-TB
|
lineage4.9
|
None
|
SRR3675385
|
Other
|
La1.7;lineage4.9
|
None
|
SRR15315797
|
RR-TB
|
lineage2.2.1
|
None
|
ERR978765
|
RR-TB
|
lineage4.8
|
None
|
ERR067681
|
MDR-TB
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
SRR9971041
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4799989
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
ERR369163
|
Sensitive
|
lineage4.9
|
None
|
ERR1063896
|
Sensitive
|
|
None
|
ERR2199988
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR502481
|
RR-TB
|
lineage4.9
|
None
|
ERR4831546
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
ERR502511
|
Sensitive
|
lineage4.9
|
None
|
SRR1183049
|
RR-TB
|
lineage2.2
|
None
|
SRR11662696
|
MDR-TB
|
La1.6;La3;M.canetti;lineage4.2.2
|
None
|
ERR5311079
|
Other
|
La1.6;La3;M.canetti;lineage4.2;lineage4.9
|
None
|
ERR5162090
|
RR-TB
|
lineage4.9
|
None
|
SRR5153091
|
HR-TB
|
lineage4.3.3
|
None
|
ERR4188247
|
HR-TB
|
lineage4.9
|
None
|
SRR5341432
|
Sensitive
|
La1.7;lineage4.9;lineage7
|
None
|
SRR6046362
|
MDR-TB
|
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
|
None
|
ERR4820773
|
HR-TB
|
lineage4.9
|
None
|
SAMEA3501073
|
RR-TB
|
lineage4.8
|
None
|
ERR4821172
|
RR-TB
|
lineage4.9
|
None
|
ERR4821686
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR3797028
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
SRR5341310
|
Other
|
lineage1.1.2
|
None
|
ERR736837
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR3275709
|
HR-TB
|
lineage3
|
nl
|
SRR16156832
|
RR-TB
|
lineage2.2;lineage4
|
None
|
ERR323107
|
Sensitive
|
lineage4.9
|
None
|
SRR5341300
|
HR-TB
|
lineage4.9
|
None
|
ERR349300
|
Sensitive
|
lineage4.9
|
None
|
ERR323115
|
Sensitive
|
lineage4.9
|
None
|
SRR12708407
|
HR-TB
|
lineage4.3.2.1
|
None
|
SRR3675267
|
Other
|
La1.7;lineage4.9
|
None
|
SRR6045526
|
Other
|
lineage4.9
|
None
|
ERR9787256
|
Other
|
lineage6.1.3
|
None
|
ERR502510
|
Sensitive
|
lineage4.9
|
None
|
ERR3283030
|
HR-TB
|
lineage4.9
|
None
|
SRR16627752
|
RR-TB
|
lineage4.4
|
None
|
ERR3797015
|
HR-TB
|
lineage4.9
|
None
|
SRR3675235
|
Sensitive
|
lineage4.9
|
None
|
ERR1063883
|
HR-TB
|
lineage4.9
|
None
|
ERR363426
|
Sensitive
|
lineage4.9
|
None
|
ERR11465628
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR6046897
|
Sensitive
|
lineage4.9
|
None
|
SRR14801749
|
HR-TB
|
lineage4.9
|
None
|
ERR502479
|
RR-TB
|
lineage4.9
|
None
|
ERR926158
|
Sensitive
|
lineage4.9
|
None
|
SRR16156188
|
Sensitive
|
lineage4.9
|
None
|
SRR22424787
|
Sensitive
|
lineage4.9
|
None
|
ERR4816470
|
HR-TB
|
lineage3
|
None
|
ERR3445503
|
Other
|
La1.7.1;La1.7.X-unk4
|
None
|
SRR7496471
|
Sensitive
|
lineage4
|
None
|
ERR502473
|
RR-TB
|
lineage4.9
|
None
|
SRR5341461
|
HR-TB
|
lineage4.9
|
None
|
SRR10808399
|
Sensitive
|
lineage4.9
|
None
|
ERR4819933
|
Sensitive
|
lineage4.9
|
None
|
ERR926161
|
Sensitive
|
lineage4.9
|
None
|
ERR349299
|
Other
|
lineage4.9
|
None
|
SRR9970981
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR12708411
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR13861500
|
RR-TB
|
lineage4.9
|
None
|
SRR6044942
|
HR-TB
|
lineage4.9
|
None
|
ERR3273109
|
HR-TB
|
lineage4
|
None
|
ERR926163
|
Other
|
lineage4.9
|
None
|
ERR751326
|
Other
|
lineage4.9
|
None
|
ERR176779
|
HR-TB
|
lineage4.9
|
None
|
ERR867541
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR363509
|
Sensitive
|
lineage4.9
|
None
|
ERR4816904
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR6046564
|
Sensitive
|
lineage4.9
|
None
|
ERR323037
|
Other
|
lineage4.9
|
None
|
ERR978767
|
RR-TB
|
lineage4.8
|
None
|
ERR4817731
|
HR-TB
|
lineage4.9
|
None
|
ERR4799378
|
Sensitive
|
lineage4.9
|
None
|
ERR926154
|
Sensitive
|
lineage4.9
|
None
|
SRR5341453
|
Other
|
lineage4.9
|
None
|
ERR4813263
|
MDR-TB
|
lineage4.8
|
None
|
ERR4769493
|
Other
|
lineage4.9
|
None
|
ERR978766
|
RR-TB
|
lineage4.8
|
None
|
ERR978767_ERR978765_ERR978766
|
RR-TB
|
lineage4.8
|
None
|
SRR12416842
|
HR-TB
|
lineage4.9
|
None
|
ERR6866639
|
Other
|
lineage4.9
|
None
|
ERR369160
|
Sensitive
|
lineage4.9
|
None
|
ERR363445
|
Other
|
lineage4.9
|
None
|
ERR4819546
|
HR-TB
|
lineage3
|
None
|
ERR363502
|
Other
|
lineage4.9
|
None
|
SRR5341437
|
Sensitive
|
lineage4.9
|
None
|
SRR3675246
|
Other
|
lineage4.9
|
None
|
SRR21677886
|
Sensitive
|
lineage4.9
|
None
|
SRR9970979
|
Sensitive
|
lineage4.8
|
None
|
SRR5341308
|
Sensitive
|
lineage4.9
|
None
|
SRR9970978
|
Sensitive
|
La1;lineage4.1.2
|
None
|
ERR702404
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR16156697
|
RR-TB
|
lineage2.2.1
|
None
|
SRR6045519
|
MDR-TB
|
M.canetti;lineage4.9
|
None
|
SRR1184329
|
Other
|
lineage4.9
|
None
|
ERR9787153
|
Other
|
lineage6.1.3
|
None
|
SRR6832249
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4800102
|
Sensitive
|
lineage3.1.2.1
|
None
|
ERR779852
|
Sensitive
|
lineage4.9
|
None
|
SRR3675517
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR369157
|
Sensitive
|
lineage4.9
|
None
|
ERR9992879
|
XDR-TB
|
lineage4.3.3
|
None
|
ERR9786656
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR5341298
|
Sensitive
|
lineage4.9
|
None
|
SRR5341422
|
HR-TB
|
La1.7;lineage4.9;lineage7
|
None
|
ERR403298
|
MDR-TB
|
M.canetti;lineage4.2
|
None
|
SRR3675312
|
Sensitive
|
lineage4.9
|
None
|
SRR3675585
|
Sensitive
|
lineage4.9
|
None
|
ERR349296
|
Sensitive
|
lineage4.9
|
None
|
ERR736831
|
Other
|
lineage4.9
|
None
|
ERR11252558
|
Other
|
lineage4.6.3;lineage4.9
|
None
|
SRR7070157
|
Other
|
lineage4.1.1.3.1
|
None
|
ERR9786843
|
Other
|
|
None
|
ERR4817069
|
RR-TB
|
|
None
|
ERR2514692
|
Other
|
|
None
|
ERR369159
|
Sensitive
|
lineage4.9
|
None
|
ERR4769442
|
Sensitive
|
lineage4.9
|
None
|
ERR4797313
|
Sensitive
|
lineage2.2.1
|
None
|
ERR502889
|
Other
|
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
|
None
|
SRR13861149
|
RR-TB
|
lineage4.9
|
None
|
ERR4819422
|
HR-TB
|
lineage4.9
|
None
|
SRR1181289
|
Other
|
lineage2.2.1
|
None
|
SRR12006550
|
Sensitive
|
lineage1.2.1.2
|
None
|
SRR18913742
|
Sensitive
|
lineage3.1.3
|
None
|
SRR12708396
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR4831545
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
SRR6046141
|
Other
|
lineage4.9
|
None
|
ERR4796254
|
Sensitive
|
lineage4.9
|
None
|
ERR4815310
|
Other
|
lineage2.2.1;lineage4.9
|
None
|
ERR4815471
|
Sensitive
|
lineage4.9
|
None
|
SRR3675586
|
Other
|
M.canetti;lineage4.6.4;lineage4.9
|
None
|
ERR363500
|
Sensitive
|
lineage4.9
|
None
|
SRR7535082
|
Sensitive
|
lineage4.9
|
None
|
SRR6045010
|
Sensitive
|
lineage4.9
|
None
|
SRR6045832
|
Other
|
lineage4.9
|
None
|
ERR4798823
|
HR-TB
|
lineage4
|
None
|
ERR926157
|
Sensitive
|
lineage4.9
|
None
|
SRR11342662
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR7645906
|
Other
|
lineage2.2.1
|
None
|
ERR3797029
|
Other
|
lineage4.9
|
None
|
ERR4818710
|
Sensitive
|
lineage4.9
|
None
|
ERR4808964
|
RR-TB
|
lineage2.2.1
|
None
|
ERR363453
|
Sensitive
|
lineage4.9
|
None
|
ERR4817998
|
Other
|
lineage3
|
None
|
ERR11252736
|
Other
|
lineage4.9
|
None
|
SRR10993951
|
RR-TB
|
La1.6
|
None
|
SRR6044875
|
Sensitive
|
lineage4.9
|
None
|
SRR1049673
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR736817
|
HR-TB
|
lineage4.3.4
|
None
|
SRR11342649
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR12708399
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR369158
|
Other
|
lineage4.9
|
None
|
ERR363498
|
Sensitive
|
lineage4.9
|
None
|
ERR400320
|
Sensitive
|
lineage4.9
|
None
|
SRR5341313
|
Sensitive
|
La1.7;lineage4.9;lineage7
|
None
|
SRR1159378
|
Other
|
lineage4.9
|
None
|
SRR3675265
|
Other
|
lineage4
|
None
|
SRR12708384
|
Sensitive
|
lineage4.9
|
None
|
ERR550637
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR3675522
|
Other
|
lineage4.9
|
None
|
SRR15316595
|
RR-TB
|
lineage4.4.2
|
None
|
SRR12708413
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR3675501
|
Other
|
La1.7;lineage4.9
|
None
|
SRR5341296
|
Sensitive
|
lineage4.9
|
None
|
SRR5341455
|
Sensitive
|
lineage4.9
|
None
|
ERR6358979
|
Other
|
lineage4.9
|
None
|
ERR4817667
|
HR-TB
|
lineage4.8
|
None
|
ERR6866410
|
Sensitive
|
lineage4.9
|
None
|
ERR702405
|
Sensitive
|
lineage4.9
|
None
|
SRR5341341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR363506
|
Sensitive
|
lineage4.9
|
None
|
ERR926162
|
Sensitive
|
lineage4.9
|
None
|
ERR363490
|
Sensitive
|
lineage4.9
|
None
|
SRR3675455
|
Sensitive
|
lineage4.9
|
None
|
SRR1181020
|
Other
|
lineage2.2.1
|
None
|
ERR3275941
|
RR-TB
|
lineage4.3
|
nl
|
ERR5311103
|
RR-TB
|
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9
|
None
|
SRR1049672
|
Other
|
lineage3
|
None
|
ERR363479
|
Sensitive
|
lineage4.9
|
None
|
SRR3675473
|
Sensitive
|
lineage4.9
|
None
|
ERR4830353
|
Other
|
La1.7
|
None
|
SRR3675574
|
Other
|
lineage4.6.3;lineage4.9;lineage6.3
|
None
|
SRR3675446
|
RR-TB
|
lineage4.9
|
None
|
ERR987707
|
MDR-TB
|
lineage4.7
|
None
|
SRR9971150
|
RR-TB
|
lineage4.8.1
|
None
|
ERR4769508
|
RR-TB
|
lineage4.9
|
None
|
ERR926160
|
Sensitive
|
lineage4.9
|
None
|
ERR736856
|
Sensitive
|
lineage4.9
|
None
|
ERR13264981
|
Sensitive
|
La1.7;lineage4.9
|
None
|
ERR181887
|
Other
|
lineage4.9
|
None
|
SRR10809074
|
Sensitive
|
lineage4.9
|
None
|
SRR5341384
|
HR-TB
|
lineage4.9
|
None
|
ERR4818561
|
Sensitive
|
lineage4.9
|
None
|
ERR349265
|
Other
|
lineage4.9
|
None
|
ERR373945
|
Sensitive
|
lineage4.9
|
None
|
ERR1063855
|
Other
|
lineage4.9
|
None
|
SRR1062880
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR6865502
|
Sensitive
|
lineage4
|
None
|
SRR11662694
|
Other
|
lineage4.9
|
None
|
ERR4819051
|
Sensitive
|
lineage4.9
|
None
|
ERR363449
|
Sensitive
|
lineage4.9
|
None
|
SRR26159063
|
RR-TB
|
lineage4.9
|
None
|
ERR363474
|
Sensitive
|
lineage4.9
|
None
|
ERR4818252
|
Sensitive
|
lineage4.1.1.2
|
None
|
ERR4769474
|
HR-TB
|
lineage4.9
|
None
|
SAMEA2533358
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR124636
|
Sensitive
|
lineage4.9
|
None
|
ERR067699
|
Sensitive
|
La1;lineage2;lineage4.9
|
None
|
ERR1873492
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
SRR12708370
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR4814396
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR6865513
|
Other
|
lineage4.1.2.1
|
None
|
ERR4811035
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.5
|
None
|
ERR400326
|
Other
|
lineage4.9
|
None
|
SRR6045327
|
Other
|
lineage2.1;lineage4.3.2;lineage4.9
|
None
|
SRR6511621
|
Sensitive
|
lineage4.9
|
None
|
ERR867523
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4814639
|
HR-TB
|
lineage4.9
|
None
|
ERR1035162
|
Other
|
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
|
None
|
SRR5341323
|
Sensitive
|
lineage4.9
|
None
|
ERR485006
|
HR-TB
|
lineage4.9
|
None
|
ERR1063862
|
HR-TB
|
lineage4.9
|
None
|
SRR6045371
|
Other
|
lineage4.9
|
None
|
ERR1063859
|
HR-TB
|
La1.7.1;lineage4.9
|
None
|
ERR363499
|
Sensitive
|
lineage4.9
|
None
|
SRR11342698
|
RR-TB
|
lineage4.4.1.1
|
None
|
SRR12708372
|
Sensitive
|
lineage4.9
|
None
|
ERR4819877
|
HR-TB
|
lineage4.9
|
None
|
ERR9786711
|
Sensitive
|
lineage4.6.2.2
|
None
|
ERR11465232
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR4812155
|
Other
|
lineage4.9
|
None
|
SRR3675229
|
Sensitive
|
lineage4.9
|
None
|
SRR3675247
|
Other
|
lineage4.9
|
None
|
SRR11342696
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR3675441
|
Other
|
lineage4.9
|
None
|
SRR3675449
|
Other
|
M.canetti;lineage4.9
|
None
|
ERR323056
|
HR-TB
|
lineage4.4.1.2
|
None
|
SRR11342644
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|