TB-Profiler result

Run: ERR2514821
Summary

Run ID: ERR2514821

Sample name:

Date: 31-03-2023 20:35:07

Number of reads: 556988

Percentage reads mapped: 70.38

Strain: lineage2.2.1

Drug-resistance: Other

Download CSV Download TXT Download PDF Download JSON
Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage2 East-Asian Beijing RD105 0.97
lineage2.2 East-Asian (Beijing) Beijing-RD207 RD105;RD207 0.95
lineage2.2.1 East-Asian (Beijing) Beijing-RD181 RD105;RD207;RD181 1.0
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
embB 4247448 p.His312Arg missense_variant 0.18 ethambutol
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrB 5997 p.Tyr253Cys missense_variant 0.15
gyrA 6334 c.-968G>C upstream_gene_variant 0.23
gyrA 6361 c.-941G>A upstream_gene_variant 0.2
gyrA 6362 c.-940T>C upstream_gene_variant 0.2
gyrA 6376 c.-926G>A upstream_gene_variant 0.33
gyrA 6379 c.-923C>G upstream_gene_variant 0.31
gyrA 6382 c.-920A>G upstream_gene_variant 0.31
gyrA 6403 c.-899T>C upstream_gene_variant 0.45
gyrA 6412 c.-890G>A upstream_gene_variant 0.5
gyrA 6415 c.-887G>C upstream_gene_variant 0.5
gyrA 6418 c.-884C>G upstream_gene_variant 0.38
gyrA 6427 c.-875T>C upstream_gene_variant 0.38
gyrA 6430 c.-872A>G upstream_gene_variant 0.38
gyrA 6811 c.-491C>T upstream_gene_variant 0.36
gyrA 6841 c.-461T>C upstream_gene_variant 0.45
gyrA 6853 c.-449A>G upstream_gene_variant 0.45
gyrA 6856 c.-446T>C upstream_gene_variant 0.45
gyrA 6859 c.-443T>C upstream_gene_variant 0.45
gyrA 6862 c.-440C>G upstream_gene_variant 0.45
gyrA 6866 c.-436C>T upstream_gene_variant 0.45
gyrA 6878 c.-424T>C upstream_gene_variant 0.45
gyrA 6881 c.-421_-419delTTGinsCTA upstream_gene_variant 0.45
gyrA 6892 c.-410C>T upstream_gene_variant 0.56
gyrA 6901 c.-401G>C upstream_gene_variant 0.56
gyrA 6904 c.-398C>G upstream_gene_variant 0.5
gyrB 6911 p.Asn558His missense_variant 0.44
gyrA 6919 c.-383T>C upstream_gene_variant 0.44
gyrA 6931 c.-371A>G upstream_gene_variant 0.36
gyrA 6934 c.-368A>G upstream_gene_variant 0.27
gyrA 7334 c.33G>C synonymous_variant 0.17
gyrA 7335 p.Leu12Val missense_variant 0.17
gyrA 7347 p.Glu16Gln missense_variant 0.17
gyrA 7362 p.Glu21Gln missense_variant 1.0
gyrA 7391 c.90C>T synonymous_variant 0.2
gyrA 7394 c.93T>C synonymous_variant 0.2
gyrA 7427 c.126G>C synonymous_variant 0.21
gyrA 7442 c.141G>T synonymous_variant 0.38
gyrA 7451 c.150C>G synonymous_variant 0.26
gyrA 7457 c.156T>C synonymous_variant 0.25
gyrA 7475 c.174A>G synonymous_variant 0.3
gyrA 7480 p.Phe60Tyr missense_variant 0.32
gyrA 7484 c.183T>C synonymous_variant 0.32
gyrA 7490 c.189C>G synonymous_variant 0.32
gyrA 7523 c.222C>G synonymous_variant 0.18
gyrA 7585 p.Ser95Thr missense_variant 1.0
gyrA 7763 c.462T>C synonymous_variant 0.19
gyrA 7784 c.483A>G synonymous_variant 0.22
gyrA 7787 c.486G>A synonymous_variant 0.24
gyrA 7790 c.489G>C synonymous_variant 0.25
gyrA 7793 c.492G>C synonymous_variant 0.25
gyrA 7796 c.495G>C synonymous_variant 0.25
gyrA 7797 c.496_498delCTAinsTTG synonymous_variant 0.24
gyrA 7829 c.528C>T synonymous_variant 0.22
gyrA 7835 c.534A>C synonymous_variant 0.22
gyrA 7838 c.537C>T synonymous_variant 0.22
gyrA 7847 c.546G>C synonymous_variant 0.23
gyrA 7853 c.552C>A synonymous_variant 0.2
gyrA 7859 c.558A>G synonymous_variant 0.17
gyrA 8111 c.810G>C synonymous_variant 0.27
gyrA 8121 c.820T>C synonymous_variant 0.23
gyrA 8129 c.828T>C synonymous_variant 0.28
gyrA 8135 c.834C>G synonymous_variant 0.29
gyrA 8156 c.855T>C synonymous_variant 0.39
gyrA 8168 c.867A>G synonymous_variant 0.29
gyrA 8177 c.876A>C synonymous_variant 0.25
gyrA 8189 c.888G>C synonymous_variant 0.27
gyrA 8198 c.897T>C synonymous_variant 0.27
gyrA 8207 c.906T>C synonymous_variant 0.28
gyrA 8219 c.918T>C synonymous_variant 0.18
gyrA 8225 c.924T>C synonymous_variant 0.21
gyrA 8453 c.1152A>C synonymous_variant 0.31
gyrA 8459 c.1158G>A synonymous_variant 0.31
gyrA 8462 c.1161A>C synonymous_variant 0.33
gyrA 8465 c.1164C>G synonymous_variant 0.33
gyrA 8471 c.1170T>C synonymous_variant 0.33
gyrA 8472 c.1171C>T synonymous_variant 0.33
gyrA 8480 c.1179C>T synonymous_variant 0.47
gyrA 8486 c.1185T>C synonymous_variant 0.47
gyrA 8516 c.1215T>C synonymous_variant 0.58
gyrA 8519 c.1218A>G synonymous_variant 0.47
gyrA 8528 c.1227G>C synonymous_variant 0.21
gyrA 8543 c.1242C>G synonymous_variant 0.24
gyrA 8546 c.1245T>C synonymous_variant 0.22
gyrA 8552 c.1251C>G synonymous_variant 0.22
gyrA 8555 c.1254G>T synonymous_variant 0.22
gyrA 8561 c.1260A>C synonymous_variant 0.22
gyrA 8570 p.Glu423Asp missense_variant 0.25
gyrA 8576 c.1275C>G synonymous_variant 0.25
gyrA 8579 c.1278C>T synonymous_variant 0.25
gyrA 8588 c.1287G>A synonymous_variant 0.25
gyrA 8818 p.Ser506Asn missense_variant 0.13
gyrA 8852 c.1551T>C synonymous_variant 0.19
gyrA 8858 c.1557T>C synonymous_variant 0.19
gyrA 8867 c.1566A>G synonymous_variant 0.19
gyrA 8870 c.1569G>C synonymous_variant 0.23
gyrA 8873 c.1572A>C synonymous_variant 0.22
gyrA 8882 c.1581G>A synonymous_variant 0.22
gyrA 8897 c.1596T>C synonymous_variant 0.19
gyrA 8933 c.1632G>C synonymous_variant 0.2
gyrA 8939 c.1638T>C synonymous_variant 0.2
gyrA 8946 c.1645T>C synonymous_variant 0.19
gyrA 9080 c.1779G>T synonymous_variant 0.14
gyrA 9089 c.1788G>C synonymous_variant 0.17
gyrA 9104 c.1803C>T synonymous_variant 0.23
gyrA 9119 c.1818A>G synonymous_variant 0.22
gyrA 9153 p.Thr618Ala missense_variant 0.18
gyrA 9230 c.1929T>C synonymous_variant 0.14
gyrA 9233 c.1932C>G synonymous_variant 0.15
gyrA 9284 c.1983T>C synonymous_variant 0.33
gyrA 9296 c.1995T>C synonymous_variant 0.27
gyrA 9299 c.1998G>C synonymous_variant 0.27
gyrA 9300 p.Ala667Ser missense_variant 0.27
gyrA 9304 p.Gly668Glu missense_variant 1.0
gyrA 9308 p.Asp669Glu missense_variant 0.29
gyrA 9323 c.2022C>G synonymous_variant 0.26
gyrA 9329 c.2028C>G synonymous_variant 0.26
gyrA 9335 c.2034G>C synonymous_variant 0.26
gyrA 9365 c.2064G>A synonymous_variant 0.29
gyrA 9374 c.2073G>C synonymous_variant 0.25
gyrA 9377 c.2076A>G synonymous_variant 0.24
gyrA 9383 c.2082T>A synonymous_variant 0.23
gyrA 9386 c.2085T>C synonymous_variant 0.23
gyrA 9395 c.2094G>C synonymous_variant 0.17
gyrA 9398 c.2097T>C synonymous_variant 0.17
gyrA 9413 c.2112G>C synonymous_variant 0.19
fgd1 490751 c.-32T>G upstream_gene_variant 0.23
fgd1 491620 p.Ile280Val missense_variant 0.19
fgd1 491643 c.861G>C synonymous_variant 0.2
fgd1 491649 c.867C>T synonymous_variant 0.2
fgd1 491658 c.876A>G synonymous_variant 0.2
fgd1 491742 c.960T>C synonymous_variant 1.0
mshA 575629 c.282A>G synonymous_variant 0.16
mshA 575641 c.294A>G synonymous_variant 0.2
mshA 575649 p.Val101Ala missense_variant 0.2
mshA 575659 c.312A>G synonymous_variant 0.23
mshA 575674 c.327G>C synonymous_variant 0.21
mshA 575713 c.366G>A synonymous_variant 0.23
mshA 575878 c.531A>G synonymous_variant 0.21
mshA 575907 p.Ala187Val missense_variant 0.93
mshA 575965 c.618C>G synonymous_variant 0.14
mshA 575980 c.633T>C synonymous_variant 0.17
mshA 575983 c.636G>C synonymous_variant 0.17
ccsA 620362 p.Ala158Thr missense_variant 0.15
ccsA 620412 c.522T>C synonymous_variant 0.15
ccsA 620625 p.Ile245Met missense_variant 1.0
ccsA 620718 c.828G>C synonymous_variant 0.16
ccsA 620733 c.843G>C synonymous_variant 0.18
ccsA 620734 c.844C>A synonymous_variant 0.18
ccsA 620739 c.849A>G synonymous_variant 0.18
ccsA 620742 c.852G>C synonymous_variant 0.18
ccsA 620745 c.855G>C synonymous_variant 0.19
ccsA 620748 c.858T>G synonymous_variant 0.2
ccsA 620778 c.888T>C synonymous_variant 0.23
ccsA 620784 c.894C>G synonymous_variant 0.23
ccsA 620787 c.897C>G synonymous_variant 0.23
ccsA 620796 c.906C>G synonymous_variant 0.2
rpoB 759620 c.-187A>C upstream_gene_variant 0.36
rpoB 760091 c.285G>C synonymous_variant 0.35
rpoB 760101 c.295T>C synonymous_variant 0.35
rpoB 760112 c.306T>C synonymous_variant 0.42
rpoB 760118 c.312T>G synonymous_variant 0.42
rpoB 760121 c.315T>C synonymous_variant 0.42
rpoB 760130 p.Asp108Glu missense_variant 0.47
rpoB 760139 c.333A>C synonymous_variant 0.45
rpoB 760142 c.336C>G synonymous_variant 0.45
rpoB 760181 c.375T>C synonymous_variant 0.55
rpoB 760184 c.378A>G synonymous_variant 0.52
rpoB 760196 c.390C>G synonymous_variant 0.5
rpoB 760223 c.417T>C synonymous_variant 0.46
rpoB 760235 c.429T>C synonymous_variant 0.52
rpoB 760283 c.477G>C synonymous_variant 0.53
rpoB 760298 c.492G>C synonymous_variant 0.47
rpoB 760307 c.501T>C synonymous_variant 0.35
rpoB 760310 c.504G>C synonymous_variant 0.31
rpoB 760328 c.522G>C synonymous_variant 0.47
rpoB 760331 c.525G>C synonymous_variant 0.42
rpoB 760340 c.534G>T synonymous_variant 0.4
rpoB 760361 c.555T>C synonymous_variant 0.36
rpoB 760370 c.564C>G synonymous_variant 0.33
rpoB 760376 p.Asp190Glu missense_variant 0.35
rpoB 760380 p.Thr192Leu missense_variant 0.33
rpoB 760406 c.600G>C synonymous_variant 0.19
rpoB 760430 c.624T>C synonymous_variant 0.18
rpoB 760519 p.Thr238Ser missense_variant 0.2
rpoB 760522 p.Ser239Asn missense_variant 0.21
rpoB 760532 c.726T>C synonymous_variant 0.2
rpoB 760533 p.Val243Thr missense_variant 0.19
rpoB 760541 c.735G>C synonymous_variant 0.2
rpoB 760547 c.741G>C synonymous_variant 0.2
rpoB 760563 p.Arg253Met missense_variant 0.22
rpoB 760591 p.Val262Ala missense_variant 0.17
rpoB 760611 c.805T>C synonymous_variant 0.35
rpoB 760646 c.840C>G synonymous_variant 0.38
rpoB 760655 c.849A>G synonymous_variant 0.47
rpoB 760661 c.855A>C synonymous_variant 0.33
rpoB 760670 c.864G>C synonymous_variant 0.31
rpoB 760674 c.868T>C synonymous_variant 0.31
rpoB 760679 c.873A>G synonymous_variant 0.29
rpoB 760683 c.877T>C synonymous_variant 0.36
rpoB 760718 c.912C>T synonymous_variant 0.36
rpoB 760724 c.918T>C synonymous_variant 0.4
rpoB 760730 c.924T>C synonymous_variant 0.36
rpoB 760751 c.945G>C synonymous_variant 0.27
rpoB 760757 c.951T>C synonymous_variant 0.27
rpoB 760759 p.Val318Ala missense_variant 0.3
rpoB 760769 c.963C>G synonymous_variant 0.3
rpoB 760775 c.969G>C synonymous_variant 0.3
rpoB 760776 c.970_972delTCGinsAGC synonymous_variant 0.3
rpoB 760793 c.987A>G synonymous_variant 0.27
rpoB 760805 c.999G>C synonymous_variant 0.3
rpoB 760808 c.1002C>G synonymous_variant 0.3
rpoB 760820 c.1014T>C synonymous_variant 0.4
rpoB 760826 c.1020C>G synonymous_variant 0.44
rpoB 760830 c.1024T>C synonymous_variant 0.44
rpoB 760845 p.Thr347Pro missense_variant 0.33
rpoB 760859 c.1053T>C synonymous_variant 0.27
rpoB 760862 c.1056G>C synonymous_variant 0.27
rpoB 760869 p.Val355Ile missense_variant 0.29
rpoB 760886 c.1080A>G synonymous_variant 0.25
rpoB 760910 c.1104C>T synonymous_variant 0.2
rpoB 760934 c.1128C>T synonymous_variant 0.2
rpoB 760946 c.1140A>G synonymous_variant 0.29
rpoB 760982 c.1176G>C synonymous_variant 0.29
rpoB 760985 c.1179G>C synonymous_variant 0.29
rpoB 760991 c.1185G>C synonymous_variant 0.27
rpoB 761006 c.1200C>G synonymous_variant 0.2
rpoB 761015 c.1209G>C synonymous_variant 0.27
rpoB 761021 c.1215G>C synonymous_variant 0.29
rpoB 761027 c.1221A>G synonymous_variant 0.29
rpoB 761037 c.1231T>C synonymous_variant 0.29
rpoB 761042 c.1236C>T synonymous_variant 0.29
rpoB 761057 c.1251G>C synonymous_variant 0.31
rpoB 761102 c.1296A>G synonymous_variant 0.25
rpoB 761129 c.1323G>C synonymous_variant 0.22
rpoB 761133 c.1327T>C synonymous_variant 0.23
rpoB 761150 c.1344A>C synonymous_variant 0.19
rpoB 761153 c.1347G>C synonymous_variant 0.19
rpoB 761165 c.1359G>C synonymous_variant 0.21
rpoB 761234 c.1428G>C synonymous_variant 0.27
rpoB 761249 c.1443A>G synonymous_variant 0.29
rpoB 761255 c.1449T>G synonymous_variant 0.29
rpoB 761261 c.1455G>T synonymous_variant 0.32
rpoB 761306 c.1500C>G synonymous_variant 0.3
rpoB 761318 c.1512G>C synonymous_variant 0.26
rpoB 761327 c.1521A>G synonymous_variant 0.2
rpoB 761330 c.1524G>C synonymous_variant 0.17
rpoB 761606 c.1800C>G synonymous_variant 0.17
rpoB 761612 c.1806G>C synonymous_variant 0.18
rpoB 761615 c.1809A>C synonymous_variant 0.17
rpoB 761675 c.1869G>C synonymous_variant 0.19
rpoB 761708 c.1902C>T synonymous_variant 0.19
rpoB 761732 c.1926C>G synonymous_variant 0.16
rpoB 761735 c.1929C>G synonymous_variant 0.16
rpoB 761747 c.1941G>C synonymous_variant 0.2
rpoB 761750 c.1944G>C synonymous_variant 0.2
rpoB 761765 c.1959T>C synonymous_variant 0.2
rpoB 761772 p.His656Ala missense_variant 0.19
rpoB 761778 p.Asn658Asp missense_variant 0.19
rpoB 761815 p.Ala670Asp missense_variant 0.15
rpoB 761834 c.2028T>C synonymous_variant 0.19
rpoB 761867 c.2061C>T synonymous_variant 0.22
rpoB 761873 c.2067A>C synonymous_variant 0.19
rpoB 761885 c.2079T>C synonymous_variant 0.2
rpoB 761909 c.2103T>C synonymous_variant 0.21
rpoB 761912 c.2106T>C synonymous_variant 0.22
rpoB 761915 p.Asp703Glu missense_variant 0.23
rpoB 761916 p.Asp704Asn missense_variant 0.23
rpoC 762989 c.-381G>C upstream_gene_variant 0.25
rpoC 762995 c.-375G>T upstream_gene_variant 0.25
rpoC 763028 c.-342T>C upstream_gene_variant 0.44
rpoC 763031 c.-339T>G upstream_gene_variant 1.0
rpoC 763034 c.-336C>G upstream_gene_variant 0.41
rpoC 763040 c.-330C>G upstream_gene_variant 0.47
rpoC 763070 c.-300T>C upstream_gene_variant 0.47
rpoC 763085 c.-285C>G upstream_gene_variant 0.42
rpoC 763115 c.-255T>C upstream_gene_variant 0.45
rpoC 763145 c.-225G>A upstream_gene_variant 0.43
rpoC 763148 c.-222G>C upstream_gene_variant 0.45
rpoC 763158 c.-212C>T upstream_gene_variant 0.42
rpoC 763166 c.-204A>G upstream_gene_variant 0.44
rpoC 763193 c.-177C>G upstream_gene_variant 0.27
rpoC 763202 c.-168A>C upstream_gene_variant 0.25
rpoC 763205 c.-165G>C upstream_gene_variant 0.25
rpoC 763206 c.-164_-162delAGTinsTCG upstream_gene_variant 0.25
rpoC 763214 c.-156T>C upstream_gene_variant 0.25
rpoC 763226 c.-144A>G upstream_gene_variant 0.3
rpoC 763227 c.-143C>T upstream_gene_variant 0.3
rpoC 763238 c.-132T>C upstream_gene_variant 0.27
rpoC 763253 c.-117G>C upstream_gene_variant 0.27
rpoC 763256 c.-114G>A upstream_gene_variant 0.27
rpoC 763351 c.-19T>C upstream_gene_variant 0.5
rpoC 763352 c.-18T>A upstream_gene_variant 0.5
rpoC 763402 c.33C>A synonymous_variant 0.44
rpoC 763411 c.42T>G synonymous_variant 0.44
rpoC 763414 c.45T>C synonymous_variant 0.4
rpoC 763441 c.72C>T synonymous_variant 0.4
rpoC 763444 c.75T>C synonymous_variant 0.4
rpoC 763456 c.87A>G synonymous_variant 0.44
rpoC 763486 c.117T>G synonymous_variant 0.25
rpoC 763492 c.123G>C synonymous_variant 0.24
rpoC 763528 c.159G>A synonymous_variant 0.22
rpoC 763546 c.177A>G synonymous_variant 0.29
rpoC 763573 c.204G>C synonymous_variant 0.31
rpoC 763576 c.207C>G synonymous_variant 0.31
rpoC 763594 c.225C>T synonymous_variant 0.25
rpoC 763636 c.267T>C synonymous_variant 0.19
rpoC 763660 c.291T>G synonymous_variant 0.2
rpoC 763675 c.306C>G synonymous_variant 0.16
rpoC 763702 c.333C>G synonymous_variant 0.17
rpoC 763717 c.348T>C synonymous_variant 0.17
rpoC 763732 c.363C>G synonymous_variant 0.17
rpoC 763741 c.372C>T synonymous_variant 0.19
rpoC 763744 c.375G>C synonymous_variant 0.19
rpoC 763765 c.396T>C synonymous_variant 0.18
rpoC 763774 c.405G>C synonymous_variant 0.18
rpoC 763807 c.438T>C synonymous_variant 0.15
rpoC 763872 p.Gly168Ala missense_variant 0.23
rpoC 763876 p.Glu169Asp missense_variant 0.21
rpoC 763879 c.510A>G synonymous_variant 0.2
rpoC 763888 c.519G>C synonymous_variant 0.18
rpoC 763891 c.522G>C synonymous_variant 0.19
rpoC 763936 c.567C>G synonymous_variant 0.17
rpoC 763939 c.570G>A synonymous_variant 0.18
rpoC 763942 c.573C>G synonymous_variant 0.18
rpoC 763945 c.576T>C synonymous_variant 0.18
rpoC 763948 c.579G>A synonymous_variant 0.19
rpoC 763954 c.585C>G synonymous_variant 0.19
rpoC 763963 c.594C>G synonymous_variant 0.19
rpoC 763969 c.600C>T synonymous_variant 0.19
rpoC 763978 c.609C>T synonymous_variant 0.15
rpoC 763996 c.627T>C synonymous_variant 0.15
rpoC 764026 p.Leu219Phe missense_variant 0.17
rpoC 764040 p.Ser224Thr missense_variant 0.17
rpoC 764044 c.675T>C synonymous_variant 0.22
rpoC 764059 c.690G>C synonymous_variant 0.21
rpoC 764098 c.729A>G synonymous_variant 0.17
rpoC 764188 c.819A>G synonymous_variant 0.21
rpoC 764206 c.837T>C synonymous_variant 0.19
rpoC 764215 c.846A>G synonymous_variant 0.3
rpoC 764236 c.867G>A synonymous_variant 0.3
rpoC 764237 p.Leu290Ile missense_variant 0.3
rpoC 764257 c.888G>C synonymous_variant 0.22
rpoC 764266 c.897T>C synonymous_variant 0.29
rpoC 764269 c.900G>C synonymous_variant 0.29
rpoC 764272 c.903G>C synonymous_variant 0.29
rpoC 764278 c.909A>G synonymous_variant 0.3
rpoC 764293 c.924G>C synonymous_variant 0.3
rpoC 764317 c.948C>G synonymous_variant 0.31
rpoC 764329 c.960C>T synonymous_variant 0.27
rpoC 764338 c.969G>A synonymous_variant 0.27
rpoC 764353 c.984G>T synonymous_variant 0.31
rpoC 764419 c.1050C>G synonymous_variant 0.21
rpoC 764428 c.1059G>C synonymous_variant 0.21
rpoC 764431 c.1062G>C synonymous_variant 0.18
rpoC 764434 c.1065A>G synonymous_variant 0.18
rpoC 764446 c.1077T>C synonymous_variant 0.17
rpoC 764449 c.1080G>C synonymous_variant 0.17
rpoC 764452 c.1083T>C synonymous_variant 0.17
rpoC 764489 c.1120C>T synonymous_variant 0.17
rpoC 764554 c.1185C>T synonymous_variant 0.14
rpoC 764593 c.1224C>T synonymous_variant 0.18
rpoC 764626 c.1257C>T synonymous_variant 0.35
rpoC 764632 c.1263T>C synonymous_variant 0.35
rpoC 764650 c.1281G>T synonymous_variant 0.3
rpoC 764668 c.1299C>T synonymous_variant 0.32
rpoC 764752 c.1383G>C synonymous_variant 0.24
rpoC 764764 c.1395T>C synonymous_variant 0.23
rpoC 764803 c.1434C>T synonymous_variant 0.24
rpoC 764809 c.1440C>T synonymous_variant 0.24
rpoC 764815 c.1446A>G synonymous_variant 0.23
rpoC 764827 c.1458G>C synonymous_variant 0.19
rpoC 764948 c.1579T>C synonymous_variant 0.18
rpoC 764968 c.1599T>C synonymous_variant 0.18
rpoC 764995 c.1626C>G synonymous_variant 0.17
rpoC 765383 p.Met672Leu missense_variant 0.26
rpoC 765404 p.Leu679Val missense_variant 0.32
rpoC 765409 c.2040T>C synonymous_variant 0.27
rpoC 765421 c.2052C>G synonymous_variant 0.23
rpoC 765454 c.2085C>G synonymous_variant 0.25
rpoC 765478 c.2109T>C synonymous_variant 0.21
rpoC 765499 c.2130C>G synonymous_variant 0.29
rpoC 765508 c.2139C>G synonymous_variant 0.29
rpoC 765541 c.2172C>G synonymous_variant 0.32
rpoC 765556 c.2187G>C synonymous_variant 0.25
rpoC 765559 c.2190G>C synonymous_variant 0.27
rpoC 765580 c.2211G>C synonymous_variant 0.17
rpoC 765613 p.His748Gln missense_variant 0.15
rpoC 765625 c.2256C>G synonymous_variant 0.18
rpoC 765628 c.2259G>C synonymous_variant 0.18
rpoC 765631 p.Asp754Glu missense_variant 0.31
rpoC 765658 c.2289C>T synonymous_variant 0.4
rpoC 765700 c.2331T>C synonymous_variant 0.33
rpoC 765734 c.2365T>C synonymous_variant 0.29
rpoC 765739 c.2370G>T synonymous_variant 0.21
rpoC 765751 c.2382C>G synonymous_variant 0.21
rpoC 765753 p.Asp795Ala missense_variant 0.19
rpoC 765883 c.2514C>G synonymous_variant 0.37
rpoC 765886 c.2517C>G synonymous_variant 0.37
rpoC 765892 c.2523T>C synonymous_variant 0.3
rpoC 765937 c.2568T>C synonymous_variant 0.48
rpoC 765967 c.2598C>T synonymous_variant 0.56
rpoC 765982 c.2613C>G synonymous_variant 0.4
rpoC 765994 c.2625A>T synonymous_variant 0.45
rpoC 766010 c.2641_2642delTCinsAG synonymous_variant 0.46
rpoC 766021 c.2652G>C synonymous_variant 0.35
rpoC 766027 c.2658G>C synonymous_variant 0.35
rpoC 766043 p.Gln892Glu missense_variant 0.38
rpoC 766061 p.Val898Ile missense_variant 0.29
rpoC 766081 c.2712T>C synonymous_variant 0.21
rpoC 766082 p.Ala905Gln missense_variant 0.21
rpoC 766096 c.2727G>C synonymous_variant 0.18
rpoC 766288 c.2919C>G synonymous_variant 0.2
rpoC 766303 c.2934C>T synonymous_variant 0.17
rpoC 766312 c.2943T>G synonymous_variant 0.25
rpoC 766327 c.2958C>A synonymous_variant 0.26
rpoC 766345 c.2976T>C synonymous_variant 0.35
rpoC 766348 c.2979A>G synonymous_variant 0.35
rpoC 766357 c.2988C>T synonymous_variant 0.38
rpoC 766363 c.2994G>C synonymous_variant 0.39
rpoC 766366 c.2997C>G synonymous_variant 0.39
rpoC 766381 c.3012C>T synonymous_variant 0.42
rpoC 766384 c.3015A>G synonymous_variant 0.44
rpoC 766408 c.3039C>G synonymous_variant 0.5
rpoC 766411 c.3042C>G synonymous_variant 0.5
rpoC 766426 c.3057C>T synonymous_variant 0.45
rpoC 766447 c.3078T>C synonymous_variant 0.62
rpoC 766483 c.3114G>C synonymous_variant 0.67
rpoC 766484 p.Val1039Ile missense_variant 0.67
rpoC 766492 c.3123T>C synonymous_variant 0.67
rpoC 766495 c.3126C>T synonymous_variant 0.56
rpoC 766522 c.3153C>G synonymous_variant 0.57
rpoC 766528 c.3159T>C synonymous_variant 0.53
rpoC 766531 c.3162G>C synonymous_variant 0.53
rpoC 766540 p.Asp1057Glu missense_variant 0.42
rpoC 766543 c.3174C>T synonymous_variant 0.42
rpoC 766549 c.3180G>C synonymous_variant 0.36
rpoC 766573 c.3204T>C synonymous_variant 0.27
rpoC 766582 c.3213C>G synonymous_variant 0.23
rpoC 766583 p.Gly1072Ser missense_variant 0.23
rpoC 766591 c.3222A>G synonymous_variant 0.23
rpoC 766594 c.3225G>C synonymous_variant 0.27
rpoC 766597 c.3228C>G synonymous_variant 0.36
rpoC 766607 p.Ile1080Leu missense_variant 0.36
rpoC 766645 p.Glu1092Asp missense_variant 0.87
rpoC 766657 c.3288A>G synonymous_variant 0.25
rpoC 766726 c.3357T>C synonymous_variant 0.17
rpoC 766801 c.3432C>G synonymous_variant 0.17
rpoC 766804 c.3435A>G synonymous_variant 0.17
rpoC 766843 c.3474T>C synonymous_variant 0.26
rpoC 766861 c.3492G>C synonymous_variant 0.17
rpoC 766864 c.3495G>C synonymous_variant 0.17
rpoC 766894 c.3525T>C synonymous_variant 0.2
rpoC 766895 c.3526T>C synonymous_variant 0.2
rpoC 766900 c.3531T>C synonymous_variant 0.2
rpoC 766933 c.3564A>G synonymous_variant 0.2
rpoC 766945 c.3576A>G synonymous_variant 0.17
rpoC 767059 c.3690T>G synonymous_variant 0.19
rpoC 767062 c.3693C>A synonymous_variant 0.18
rpoC 767098 c.3729T>C synonymous_variant 0.18
rpoC 767119 c.3750A>G synonymous_variant 0.19
rpoC 767134 c.3765C>A synonymous_variant 0.22
rpoC 767158 c.3789T>C synonymous_variant 0.29
rpoC 767180 p.Ala1271Gln missense_variant 0.29
rpoC 767206 c.3837C>G synonymous_variant 0.17
rpoC 767209 c.3840T>C synonymous_variant 0.17
rpoC 767212 c.3843G>C synonymous_variant 0.17
rpoC 767221 c.3852C>G synonymous_variant 0.17
mmpL5 775639 p.Ile948Val missense_variant 1.0
mmpL5 775939 p.Ala848Ser missense_variant 0.18
mmpL5 775940 c.2541C>G synonymous_variant 0.18
mmpL5 775946 c.2535C>G synonymous_variant 0.18
mmpL5 775957 p.Ile842Val missense_variant 0.19
mmpL5 775964 p.Ala839Ser missense_variant 0.2
mmpL5 775972 p.Ala837Pro missense_variant 0.19
mmpL5 775975 c.2506T>C synonymous_variant 0.18
mmpL5 775994 c.2487C>T synonymous_variant 0.25
mmpL5 776042 c.2439C>A synonymous_variant 0.17
mmpL5 776100 p.Thr794Ile missense_variant 1.0
mmpL5 776182 p.Asp767Asn missense_variant 1.0
mmpL5 776308 p.Asp725Asn missense_variant 0.14
mmpL5 776693 p.Val596Ile missense_variant 0.22
mmpL5 776705 c.1776C>T synonymous_variant 0.18
mmpL5 776963 c.1518C>T synonymous_variant 0.14
mmpL5 778321 p.Glu54* stop_gained 0.15
mmpS5 779615 c.-710C>G upstream_gene_variant 1.0
rpsL 781395 c.-165T>C upstream_gene_variant 1.0
rpsL 781655 c.96T>C synonymous_variant 0.18
rpsL 781658 c.99A>G synonymous_variant 0.25
rpsL 781700 c.141G>C synonymous_variant 0.3
rpsL 781715 c.156T>C synonymous_variant 0.29
rpsL 781728 c.169T>C synonymous_variant 0.27
rpsL 781736 c.177T>C synonymous_variant 0.31
rpsL 781742 c.183C>T synonymous_variant 0.31
rpsL 781748 c.189C>G synonymous_variant 0.31
rpsL 781754 c.195G>C synonymous_variant 0.33
rpsL 781760 c.201T>C synonymous_variant 0.31
rpsL 781769 c.210G>A synonymous_variant 0.33
rpsL 781772 c.213C>G synonymous_variant 0.33
rpsL 781808 c.249C>T synonymous_variant 0.29
rpsL 781811 c.252C>T synonymous_variant 0.29
rpsL 781832 c.273T>C synonymous_variant 0.29
rpsL 781838 c.279G>C synonymous_variant 0.29
rpsL 781841 c.282C>G synonymous_variant 0.23
rpsL 781865 c.306G>C synonymous_variant 0.17
rpsL 781868 c.309T>C synonymous_variant 0.17
rpsL 781871 c.312G>C synonymous_variant 0.17
rpsL 781877 c.318T>C synonymous_variant 0.17
rpsL 781892 c.333A>G synonymous_variant 0.17
rpsL 781898 c.339A>T synonymous_variant 0.17
rplC 801207 c.399C>T synonymous_variant 0.15
rplC 801246 c.438C>T synonymous_variant 0.21
fbiC 1303200 c.270G>C synonymous_variant 0.17
fbiC 1303217 p.Arg96His missense_variant 0.21
fbiC 1303219 c.289_291delTTAinsCTG synonymous_variant 0.19
fbiC 1303227 c.297G>C synonymous_variant 0.2
fbiC 1303233 c.303T>C synonymous_variant 0.2
fbiC 1303239 c.309C>T synonymous_variant 0.18
fbiC 1303501 c.571C>T synonymous_variant 0.18
fbiC 1303509 c.579G>C synonymous_variant 0.21
fbiC 1303530 c.600G>A synonymous_variant 0.21
fbiC 1303534 p.Ser202Ala missense_variant 0.21
fbiC 1303545 c.615A>G synonymous_variant 0.24
fbiC 1303575 c.645G>C synonymous_variant 0.24
fbiC 1303590 c.660A>G synonymous_variant 0.22
fbiC 1303605 c.675C>G synonymous_variant 0.17
fbiC 1303608 c.678G>A synonymous_variant 0.17
fbiC 1303614 c.684C>T synonymous_variant 0.24
fbiC 1303617 c.687C>G synonymous_variant 0.24
fbiC 1303632 c.702T>G synonymous_variant 0.22
fbiC 1303681 c.751T>C synonymous_variant 0.2
fbiC 1303686 c.756C>G synonymous_variant 0.27
fbiC 1303695 c.765T>C synonymous_variant 0.24
fbiC 1303704 c.774T>G synonymous_variant 0.25
fbiC 1303708 c.778T>C synonymous_variant 0.24
fbiC 1303728 c.798G>A synonymous_variant 0.25
fbiC 1303731 c.801A>G synonymous_variant 0.18
fbiC 1303732 p.Ser268Glu missense_variant 0.18
fbiC 1303737 c.807G>A synonymous_variant 0.21
fbiC 1303746 c.816T>C synonymous_variant 0.22
fbiC 1303749 c.819G>C synonymous_variant 0.22
fbiC 1303752 c.822A>G synonymous_variant 0.28
fbiC 1303755 c.825T>C synonymous_variant 0.21
fbiC 1303785 c.855G>T synonymous_variant 0.32
fbiC 1303789 p.Ile287Val missense_variant 0.3
fbiC 1303812 c.882C>T synonymous_variant 0.23
fbiC 1303818 c.888C>G synonymous_variant 0.29
fbiC 1303836 c.906G>C synonymous_variant 0.22
fbiC 1303845 c.915C>G synonymous_variant 0.22
fbiC 1303846 p.Phe306Val missense_variant 0.22
fbiC 1303854 c.924T>C synonymous_variant 0.24
fbiC 1303860 c.930A>C synonymous_variant 0.29
fbiC 1303884 c.954T>G synonymous_variant 0.29
fbiC 1303905 c.975G>C synonymous_variant 0.24
fbiC 1303911 c.981G>C synonymous_variant 0.24
fbiC 1303920 c.990C>T synonymous_variant 0.26
fbiC 1303948 p.Gly340Arg missense_variant 0.17
fbiC 1303953 p.Asp341Glu missense_variant 0.19
fbiC 1303956 c.1026A>G synonymous_variant 0.18
fbiC 1303961 p.Arg344Leu missense_variant 0.18
fbiC 1303971 c.1041T>C synonymous_variant 0.22
fbiC 1303980 c.1050G>A synonymous_variant 0.25
fbiC 1304004 c.1074A>G synonymous_variant 0.27
fbiC 1304008 c.1078T>C synonymous_variant 0.26
fbiC 1304022 c.1092T>C synonymous_variant 0.24
fbiC 1304031 c.1101C>G synonymous_variant 0.23
fbiC 1304034 c.1104A>G synonymous_variant 0.23
fbiC 1304040 c.1110C>G synonymous_variant 0.24
fbiC 1304046 c.1116C>G synonymous_variant 0.26
fbiC 1304049 c.1119T>C synonymous_variant 0.25
fbiC 1304050 c.1120T>C synonymous_variant 0.25
fbiC 1304058 c.1128G>A synonymous_variant 0.24
fbiC 1304059 c.1129C>T synonymous_variant 0.24
fbiC 1304064 c.1134G>C synonymous_variant 0.22
fbiC 1304067 c.1137G>C synonymous_variant 0.21
fbiC 1304104 c.1174C>T synonymous_variant 0.16
fbiC 1304499 c.1569T>C synonymous_variant 0.18
fbiC 1304526 c.1596T>G synonymous_variant 0.3
fbiC 1304535 c.1605G>A synonymous_variant 0.33
fbiC 1304541 c.1611C>T synonymous_variant 0.33
fbiC 1304544 c.1614T>C synonymous_variant 0.3
fbiC 1304545 p.Val539Thr missense_variant 0.3
fbiC 1304553 c.1623C>T synonymous_variant 0.25
fbiC 1304559 p.Glu543Asp missense_variant 0.25
fbiC 1304565 c.1635C>G synonymous_variant 0.27
fbiC 1304568 c.1638T>C synonymous_variant 0.25
fbiC 1304571 c.1641G>C synonymous_variant 0.25
fbiC 1304580 c.1650T>C synonymous_variant 0.25
fbiC 1304613 c.1683T>G synonymous_variant 0.27
fbiC 1304625 c.1695C>T synonymous_variant 0.25
fbiC 1304634 c.1704C>G synonymous_variant 0.18
fbiC 1304703 c.1773C>G synonymous_variant 0.23
fbiC 1304711 p.Ala594Glu missense_variant 0.19
fbiC 1304715 c.1785G>C synonymous_variant 0.19
fbiC 1304724 c.1794A>G synonymous_variant 0.21
fbiC 1304727 c.1797A>G synonymous_variant 0.25
fbiC 1304742 c.1812T>C synonymous_variant 0.31
fbiC 1304748 c.1818T>C synonymous_variant 0.3
fbiC 1304757 c.1827A>G synonymous_variant 0.31
fbiC 1304760 c.1830G>C synonymous_variant 0.31
fbiC 1304769 c.1839C>T synonymous_variant 0.32
fbiC 1304778 c.1848T>C synonymous_variant 0.33
fbiC 1304784 c.1854T>C synonymous_variant 0.34
fbiC 1304787 c.1857T>C synonymous_variant 0.39
fbiC 1304808 c.1878C>G synonymous_variant 0.37
fbiC 1304811 c.1881C>G synonymous_variant 0.37
fbiC 1304817 c.1887T>C synonymous_variant 0.4
fbiC 1304829 c.1899T>C synonymous_variant 0.5
fbiC 1304832 c.1902C>T synonymous_variant 0.48
fbiC 1304853 c.1923C>G synonymous_variant 0.43
fbiC 1304856 c.1926C>G synonymous_variant 0.38
fbiC 1304869 c.1939C>T synonymous_variant 0.37
fbiC 1304875 p.Ile649Val missense_variant 0.37
fbiC 1304889 c.1959G>C synonymous_variant 0.18
fbiC 1304891 p.Ile654Thr missense_variant 0.17
fbiC 1304893 p.Gly655Ser missense_variant 0.17
fbiC 1304904 c.1974G>A synonymous_variant 0.15
fbiC 1304907 c.1977C>G synonymous_variant 0.15
fbiC 1304910 c.1981dupC frameshift_variant 0.15
fbiC 1304916 c.1986T>C synonymous_variant 0.31
fbiC 1304925 c.1995G>C synonymous_variant 0.31
fbiC 1304928 c.1998T>C synonymous_variant 0.35
fbiC 1304937 c.2007G>C synonymous_variant 0.38
fbiC 1304940 c.2010A>G synonymous_variant 0.43
fbiC 1304946 c.2016G>C synonymous_variant 0.5
fbiC 1304955 c.2025G>A synonymous_variant 0.46
fbiC 1304958 c.2028T>G synonymous_variant 0.46
fbiC 1304991 c.2061G>C synonymous_variant 0.45
fbiC 1304994 c.2064A>G synonymous_variant 0.45
fbiC 1304995 p.Leu689Met missense_variant 0.45
fbiC 1305006 c.2076A>G synonymous_variant 0.42
fbiC 1305012 c.2082G>C synonymous_variant 0.33
fbiC 1305015 c.2085G>C synonymous_variant 0.33
fbiC 1305016 p.Thr696Ala missense_variant 0.33
fbiC 1305021 c.2091C>G synonymous_variant 0.3
fbiC 1305033 c.2103T>G synonymous_variant 0.3
fbiC 1305042 c.2112A>G synonymous_variant 0.33
fbiC 1305045 c.2115A>G synonymous_variant 0.33
fbiC 1305051 c.2121G>C synonymous_variant 0.38
fbiC 1305063 c.2133G>C synonymous_variant 0.25
fbiC 1305066 c.2136T>C synonymous_variant 0.22
fbiC 1305075 c.2145T>C synonymous_variant 0.27
fbiC 1305078 c.2148A>G synonymous_variant 0.2
fbiC 1305092 p.Ala721Gly missense_variant 0.22
fbiC 1305096 c.2166T>C synonymous_variant 0.25
fbiC 1305099 c.2169T>C synonymous_variant 0.25
fbiC 1305114 c.2184T>C synonymous_variant 0.33
fbiC 1305117 c.2187T>C synonymous_variant 0.36
fbiC 1305126 c.2196T>C synonymous_variant 0.33
fbiC 1305135 c.2205C>T synonymous_variant 0.36
fbiC 1305150 c.2220C>G synonymous_variant 0.6
fbiC 1305173 p.Asn748Ser missense_variant 0.47
fbiC 1305177 c.2247A>G synonymous_variant 0.47
fbiC 1305181 c.2251T>C synonymous_variant 0.47
fbiC 1305195 c.2265T>C synonymous_variant 0.32
fbiC 1305201 c.2271G>C synonymous_variant 0.3
fbiC 1305204 c.2274C>G synonymous_variant 0.26
fbiC 1305215 p.Ser762Thr missense_variant 0.24
Rv1258c 1406760 c.580_581insC frameshift_variant 1.0
Rv1258c 1407215 c.126G>T synonymous_variant 0.18
embR 1416355 c.993C>A synonymous_variant 0.22
embR 1416431 p.Ala306Glu missense_variant 0.18
embR 1416971 p.Ala126Asp missense_variant 0.17
atpE 1460861 c.-184C>G upstream_gene_variant 0.2
atpE 1460882 c.-163T>C upstream_gene_variant 0.18
atpE 1460897 c.-148A>C upstream_gene_variant 0.18
atpE 1460900 c.-145T>C upstream_gene_variant 0.18
atpE 1460915 c.-130C>G upstream_gene_variant 0.2
atpE 1460918 c.-127A>G upstream_gene_variant 0.2
atpE 1461113 c.69C>T synonymous_variant 0.15
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1472244 n.399C>A non_coding_transcript_exon_variant 0.2
rrl 1473767 n.110G>T non_coding_transcript_exon_variant 0.25
rrl 1475091 n.1434G>T non_coding_transcript_exon_variant 0.14
rrl 1475175 n.1518G>T non_coding_transcript_exon_variant 0.25
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.5
rrl 1476031 n.2374C>T non_coding_transcript_exon_variant 0.33
rrl 1476032 n.2375C>A non_coding_transcript_exon_variant 0.33
rrl 1476033 n.2376T>C non_coding_transcript_exon_variant 0.33
rrl 1476034 n.2377C>A non_coding_transcript_exon_variant 0.4
rrl 1476045 n.2388G>T non_coding_transcript_exon_variant 0.4
rrl 1476047 n.2390G>T non_coding_transcript_exon_variant 0.4
rrl 1476048 n.2391G>A non_coding_transcript_exon_variant 0.4
rrl 1476049 n.2392C>T non_coding_transcript_exon_variant 0.4
rrl 1476086 n.2429G>A non_coding_transcript_exon_variant 0.33
rrl 1476089 n.2432T>C non_coding_transcript_exon_variant 0.33
rrl 1476095 n.2438C>G non_coding_transcript_exon_variant 0.29
fabG1 1673890 p.Ala151Ser missense_variant 0.25
inhA 1673901 c.-301A>C upstream_gene_variant 0.24
fabG1 1673905 p.Ser156Ala missense_variant 0.22
inhA 1673916 c.-286A>C upstream_gene_variant 0.22
fabG1 1673917 p.Val160Leu missense_variant 0.22
inhA 1673922 c.-280T>C upstream_gene_variant 0.21
inhA 1673946 c.-256C>G upstream_gene_variant 0.18
inhA 1673955 c.-247G>C upstream_gene_variant 0.18
inhA 1673961 c.-241A>C upstream_gene_variant 0.17
inhA 1673985 c.-217C>G upstream_gene_variant 0.17
inhA 1674123 c.-79T>C upstream_gene_variant 0.15
inhA 1674489 c.288G>C synonymous_variant 0.18
inhA 1674542 p.Ala114Glu missense_variant 0.25
inhA 1674546 c.345T>C synonymous_variant 0.33
inhA 1674549 c.348G>C synonymous_variant 0.27
inhA 1674552 c.351C>G synonymous_variant 0.27
inhA 1674555 c.354G>A synonymous_variant 0.27
inhA 1674561 c.360C>T synonymous_variant 0.25
inhA 1674582 c.381T>C synonymous_variant 0.27
inhA 1674585 c.384T>C synonymous_variant 0.35
inhA 1674589 p.Met130Leu missense_variant 0.33
inhA 1674601 p.Leu134Ala missense_variant 0.26
inhA 1674609 c.408G>C synonymous_variant 0.26
inhA 1674621 c.420C>G synonymous_variant 0.19
inhA 1674624 c.423A>T synonymous_variant 0.19
inhA 1674669 c.468G>C synonymous_variant 0.19
inhA 1674703 c.502T>C synonymous_variant 0.27
inhA 1674708 c.507G>A synonymous_variant 0.3
inhA 1674714 c.513C>G synonymous_variant 0.3
inhA 1674718 c.517A>C synonymous_variant 0.3
inhA 1674723 c.522C>T synonymous_variant 0.27
inhA 1674726 c.525G>C synonymous_variant 0.27
inhA 1674732 c.531C>T synonymous_variant 0.27
inhA 1674738 c.537C>G synonymous_variant 0.29
inhA 1674746 p.Tyr182Phe missense_variant 0.29
inhA 1674750 c.549T>C synonymous_variant 0.29
inhA 1674756 c.555T>C synonymous_variant 0.29
inhA 1674759 c.558G>C synonymous_variant 0.29
inhA 1674774 c.573A>G synonymous_variant 0.29
inhA 1674780 c.579T>G synonymous_variant 0.44
inhA 1674789 c.588G>C synonymous_variant 0.44
inhA 1674795 c.594G>C synonymous_variant 0.3
inhA 1674801 c.600T>C synonymous_variant 0.25
inhA 1674813 c.612C>T synonymous_variant 0.33
inhA 1674816 c.615T>C synonymous_variant 0.33
inhA 1674840 c.639C>G synonymous_variant 0.36
inhA 1674846 p.Ile215Met missense_variant 0.36
inhA 1674870 c.669T>C synonymous_variant 0.33
inhA 1674879 c.678T>C synonymous_variant 0.31
inhA 1674903 c.702T>C synonymous_variant 0.23
inhA 1674904 p.Ala235Pro missense_variant 0.23
rpsA 1833413 c.-129G>A upstream_gene_variant 0.18
rpsA 1833556 c.15C>A synonymous_variant 0.2
rpsA 1833589 c.48A>T synonymous_variant 0.21
rpsA 1833595 c.54T>C synonymous_variant 0.21
rpsA 1833667 c.126C>G synonymous_variant 0.25
rpsA 1833724 c.183C>G synonymous_variant 0.18
rpsA 1833727 c.186G>C synonymous_variant 0.18
rpsA 1833799 c.258C>T synonymous_variant 0.2
rpsA 1833805 c.264C>G synonymous_variant 0.19
rpsA 1833811 c.270G>C synonymous_variant 0.19
rpsA 1833838 c.297G>C synonymous_variant 0.22
rpsA 1833841 c.300C>G synonymous_variant 0.21
rpsA 1833847 c.306C>G synonymous_variant 0.2
rpsA 1833856 c.315A>G synonymous_variant 0.19
rpsA 1833874 c.333T>C synonymous_variant 0.32
rpsA 1833928 c.387G>C synonymous_variant 0.24
rpsA 1833931 c.390C>T synonymous_variant 0.22
rpsA 1833940 c.399C>G synonymous_variant 0.18
rpsA 1834000 c.459G>C synonymous_variant 0.17
rpsA 1834030 c.489C>G synonymous_variant 0.23
rpsA 1834099 c.558C>G synonymous_variant 0.29
rpsA 1834105 c.564C>G synonymous_variant 0.27
rpsA 1834108 c.567C>G synonymous_variant 0.29
rpsA 1834123 c.582C>G synonymous_variant 0.39
rpsA 1834150 c.609G>C synonymous_variant 0.32
rpsA 1834153 c.612T>C synonymous_variant 0.32
rpsA 1834154 p.Asn205Gln missense_variant 0.32
rpsA 1834157 c.616T>C synonymous_variant 0.33
rpsA 1834162 c.621A>G synonymous_variant 0.32
rpsA 1834165 c.624A>G synonymous_variant 0.35
rpsA 1834169 p.Thr210Ala missense_variant 0.35
rpsA 1834177 c.636A>C synonymous_variant 1.0
rpsA 1834189 c.648G>C synonymous_variant 0.43
rpsA 1834195 c.654G>C synonymous_variant 0.45
rpsA 1834222 c.681T>C synonymous_variant 0.41
rpsA 1834249 c.708T>C synonymous_variant 0.37
rpsA 1834261 c.720A>G synonymous_variant 0.36
rpsA 1834262 c.721_723delTCGinsAGT synonymous_variant 0.36
rpsA 1834303 c.762T>C synonymous_variant 0.3
rpsA 1834306 c.765T>C synonymous_variant 0.29
rpsA 1834348 c.807T>C synonymous_variant 0.21
rpsA 1834378 c.837T>C synonymous_variant 0.18
rpsA 1834396 c.855G>T synonymous_variant 0.18
rpsA 1834411 c.870T>C synonymous_variant 0.18
rpsA 1834417 c.876G>C synonymous_variant 0.19
rpsA 1834423 c.882G>C synonymous_variant 0.2
rpsA 1834435 c.894G>C synonymous_variant 0.25
rpsA 1834633 c.1092A>G synonymous_variant 0.19
rpsA 1834639 c.1098T>C synonymous_variant 0.17
rpsA 1834654 p.Glu371Asp missense_variant 0.27
rpsA 1834690 c.1149T>C synonymous_variant 0.32
rpsA 1834732 c.1191T>C synonymous_variant 0.28
rpsA 1834733 p.Ala398Ser missense_variant 0.29
rpsA 1834753 c.1212T>C synonymous_variant 0.29
rpsA 1834765 p.Glu408Asp missense_variant 0.35
rpsA 1834775 p.Ala412Thr missense_variant 0.33
rpsA 1834780 c.1239A>G synonymous_variant 0.33
rpsA 1834786 c.1245A>G synonymous_variant 0.25
rpsA 1834789 c.1248T>C synonymous_variant 0.25
rpsA 1834792 c.1251G>C synonymous_variant 0.21
rpsA 1834902 p.Ala454Glu missense_variant 0.25
tlyA 1917972 c.33A>G synonymous_variant 1.0
ndh 2101831 c.1212G>A synonymous_variant 0.14
ndh 2102227 c.816C>T synonymous_variant 0.2
ndh 2102230 c.813G>C synonymous_variant 0.18
ndh 2102233 c.810G>A synonymous_variant 0.18
ndh 2102248 c.795C>G synonymous_variant 0.2
katG 2154470 p.Gly548Cys missense_variant 0.14
katG 2154724 p.Arg463Leu missense_variant 1.0
katG 2155632 c.480A>C synonymous_variant 0.22
katG 2155638 c.474G>A synonymous_variant 0.22
katG 2155641 p.Lys157Asn missense_variant 0.2
katG 2155661 p.Val151Ile missense_variant 0.25
katG 2155668 c.444G>C synonymous_variant 0.22
katG 2155677 c.435C>A synonymous_variant 0.22
katG 2155680 c.432G>C synonymous_variant 0.22
katG 2155852 p.Ser87* stop_gained 0.15
katG 2156153 c.-42C>A upstream_gene_variant 0.14
PPE35 2167926 p.Leu896Ser missense_variant 1.0
PPE35 2169084 p.Ser510Leu missense_variant 0.25
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0
pncA 2289991 c.-750G>C upstream_gene_variant 0.29
pncA 2289994 c.-753A>G upstream_gene_variant 0.29
pncA 2289997 c.-756G>C upstream_gene_variant 0.29
pncA 2290009 c.-768A>G upstream_gene_variant 0.22
pncA 2290015 c.-774A>C upstream_gene_variant 0.2
pncA 2290024 c.-783C>G upstream_gene_variant 0.18
pncA 2290030 c.-791_-789delAATinsCAC upstream_gene_variant 0.2
pncA 2290033 c.-794_-792delGCCinsACG upstream_gene_variant 0.18
pncA 2290042 c.-801T>C upstream_gene_variant 0.18
kasA 2517923 c.-192C>G upstream_gene_variant 0.18
kasA 2518190 p.Ser26Ala missense_variant 0.15
kasA 2518196 p.Asp28Tyr missense_variant 0.15
kasA 2518248 p.Ala45Val missense_variant 0.14
kasA 2518282 c.168A>G synonymous_variant 0.15
kasA 2518283 p.Ala57Pro missense_variant 0.15
kasA 2518459 c.345T>C synonymous_variant 0.38
kasA 2518462 c.348A>C synonymous_variant 0.38
kasA 2518468 c.354A>C synonymous_variant 0.43
kasA 2518474 c.360G>A synonymous_variant 0.56
kasA 2518480 c.366T>C synonymous_variant 0.5
kasA 2518483 c.369C>G synonymous_variant 0.5
kasA 2518504 c.390T>C synonymous_variant 0.42
kasA 2518506 p.Ala131Glu missense_variant 0.42
kasA 2518519 c.405G>C synonymous_variant 0.42
kasA 2518528 c.414C>G synonymous_variant 0.42
kasA 2518540 c.426T>G synonymous_variant 0.42
kasA 2518561 c.447T>C synonymous_variant 0.36
kasA 2518564 c.450C>G synonymous_variant 0.22
kasA 2518567 c.453G>C synonymous_variant 0.2
kasA 2518570 c.456G>C synonymous_variant 0.2
kasA 2518574 p.Ile154Val missense_variant 0.22
kasA 2518588 c.474T>C synonymous_variant 0.2
kasA 2518591 c.477G>C synonymous_variant 0.2
kasA 2518885 c.771T>C synonymous_variant 0.15
kasA 2518898 c.784T>C synonymous_variant 0.17
kasA 2518906 c.792A>G synonymous_variant 0.17
kasA 2518910 p.Leu266Met missense_variant 0.18
kasA 2518915 c.801T>C synonymous_variant 0.18
kasA 2518936 c.822C>G synonymous_variant 0.17
kasA 2518951 c.837G>C synonymous_variant 0.18
kasA 2518963 c.849T>C synonymous_variant 0.18
kasA 2519095 c.981C>G synonymous_variant 0.15
kasA 2519158 c.1044C>T synonymous_variant 0.15
kasA 2519170 c.1056G>T synonymous_variant 0.14
ahpC 2726561 c.369T>C synonymous_variant 0.23
ahpC 2726564 c.372C>G synonymous_variant 0.29
ahpC 2726579 c.387T>C synonymous_variant 0.28
ahpC 2726591 c.399C>G synonymous_variant 0.35
ahpC 2726593 p.Val134Ala missense_variant 0.35
ahpC 2726600 c.408T>C synonymous_variant 0.37
ahpC 2726601 p.Ile137Leu missense_variant 0.35
ahpC 2726633 c.441C>T synonymous_variant 0.24
ahpC 2726638 p.Ala149Val missense_variant 0.22
ahpC 2726645 c.453C>G synonymous_variant 0.19
ahpC 2726657 c.465A>C synonymous_variant 0.21
ahpC 2726669 p.Asp159Glu missense_variant 0.17
ahpC 2726672 c.480G>A synonymous_variant 0.16
ahpC 2726675 c.483A>G synonymous_variant 0.17
ahpC 2726681 c.489A>C synonymous_variant 0.19
ahpC 2726693 c.501C>A synonymous_variant 0.25
ahpC 2726696 c.504C>G synonymous_variant 0.24
ahpC 2726709 c.517C>T synonymous_variant 0.16
folC 2746948 c.651G>C synonymous_variant 0.15
folC 2746957 c.642G>A synonymous_variant 0.15
folC 2746966 c.633G>C synonymous_variant 0.18
folC 2746974 p.Ile209Leu missense_variant 0.22
folC 2746975 c.624T>C synonymous_variant 0.22
folC 2746979 p.Ala207Asp missense_variant 0.22
folC 2746981 c.618T>C synonymous_variant 0.22
folC 2746984 c.615C>G synonymous_variant 0.2
folC 2746987 c.612T>C synonymous_variant 0.2
folC 2746999 c.600T>C synonymous_variant 0.18
folC 2747002 c.597T>C synonymous_variant 0.18
folC 2747006 p.Ser198Ala missense_variant 0.2
folC 2747032 c.567A>G synonymous_variant 0.14
folC 2747053 c.546C>T synonymous_variant 0.18
folC 2747059 c.540T>C synonymous_variant 0.19
folC 2747071 c.528C>G synonymous_variant 0.19
folC 2747239 c.360T>C synonymous_variant 0.21
folC 2747264 p.Gly112Ala missense_variant 0.27
folC 2747266 c.333C>T synonymous_variant 0.27
folC 2747281 c.318A>G synonymous_variant 0.24
folC 2747284 c.315G>C synonymous_variant 0.24
folC 2747289 p.Pro104Ala missense_variant 0.23
folC 2747290 c.309A>G synonymous_variant 0.23
folC 2747293 c.306G>A synonymous_variant 0.22
folC 2747299 c.300C>T synonymous_variant 0.22
folC 2747302 c.297A>C synonymous_variant 0.23
folC 2747314 c.285A>G synonymous_variant 0.27
folC 2747317 c.282C>G synonymous_variant 0.29
folC 2747329 c.270C>T synonymous_variant 0.27
folC 2747332 c.267G>A synonymous_variant 0.26
folC 2747338 c.261C>G synonymous_variant 0.21
folC 2747343 p.Val86Ile missense_variant 0.2
folC 2747355 p.Val82Ile missense_variant 0.16
folC 2747368 c.231G>A synonymous_variant 0.14
pepQ 2859438 c.981T>C synonymous_variant 0.17
pepQ 2860121 p.His100Asn missense_variant 0.14
Rv2752c 3064797 c.1395G>C synonymous_variant 0.25
Rv2752c 3064803 c.1389C>T synonymous_variant 0.25
Rv2752c 3064809 c.1383C>G synonymous_variant 0.22
Rv2752c 3064815 c.1377T>C synonymous_variant 0.3
Rv2752c 3064831 p.Ala454Asn missense_variant 0.27
Rv2752c 3064838 c.1354T>C synonymous_variant 0.22
Rv2752c 3064860 c.1332G>C synonymous_variant 0.24
Rv2752c 3064872 c.1320T>G synonymous_variant 0.25
Rv2752c 3064877 p.Ser439Ala missense_variant 0.25
Rv2752c 3064878 c.1314C>A synonymous_variant 0.17
Rv2752c 3064881 p.Ser437Ala missense_variant 0.18
Rv2752c 3064914 c.1278T>G synonymous_variant 0.2
Rv2752c 3064926 c.1264_1266delTTGinsCTC synonymous_variant 0.16
Rv2752c 3064932 c.1260T>C synonymous_variant 0.16
Rv2752c 3064956 p.Ser412Arg missense_variant 0.2
Rv2752c 3064962 c.1230C>G synonymous_variant 0.21
Rv2752c 3064973 p.Ala407Ser missense_variant 0.24
Rv2752c 3064974 c.1218T>C synonymous_variant 0.3
Rv2752c 3064995 c.1197C>G synonymous_variant 0.31
Rv2752c 3064998 c.1194A>G synonymous_variant 0.3
Rv2752c 3065007 c.1185G>C synonymous_variant 0.29
Rv2752c 3065013 c.1179G>C synonymous_variant 0.29
Rv2752c 3065018 p.Asn392His missense_variant 0.3
Rv2752c 3065022 c.1170G>C synonymous_variant 0.3
Rv2752c 3065028 p.Val388Ile missense_variant 0.33
Rv2752c 3065040 c.1152C>G synonymous_variant 0.32
Rv2752c 3065048 c.1144C>T synonymous_variant 0.32
Rv2752c 3065064 c.1128G>C synonymous_variant 0.22
Rv2752c 3066330 c.-139G>C upstream_gene_variant 0.16
Rv2752c 3066336 c.-145C>T upstream_gene_variant 0.16
Rv2752c 3066369 c.-180_-178delAGCinsGGG upstream_gene_variant 0.17
thyX 3067223 c.723G>C synonymous_variant 0.18
thyX 3067232 c.714C>G synonymous_variant 0.2
thyX 3067421 c.525G>C synonymous_variant 0.17
thyX 3067427 c.519G>C synonymous_variant 0.18
thyX 3067718 c.228C>G synonymous_variant 0.22
thyX 3067721 c.225T>C synonymous_variant 0.21
thyX 3067727 c.219A>C synonymous_variant 0.18
thyX 3067736 c.210C>T synonymous_variant 0.19
thyX 3067793 c.153T>C synonymous_variant 0.28
thyX 3067802 c.144C>G synonymous_variant 0.28
thyX 3067835 c.111G>A synonymous_variant 0.19
thyX 3067838 c.108C>G synonymous_variant 0.19
thyX 3067850 c.96A>C synonymous_variant 0.21
thyX 3067853 c.93C>T synonymous_variant 0.22
thyX 3067869 p.Thr26Ser missense_variant 0.24
thyX 3067874 c.72C>G synonymous_variant 0.22
thyA 3073839 c.633T>C synonymous_variant 0.15
thyA 3073860 c.612C>G synonymous_variant 0.18
thyA 3073863 c.609T>C synonymous_variant 0.18
thyA 3073866 c.606C>G synonymous_variant 0.18
thyA 3073872 p.Ile200Val missense_variant 0.18
thyA 3073878 c.594G>A synonymous_variant 0.18
thyA 3073892 c.580T>C synonymous_variant 0.18
thyA 3073893 c.579C>T synonymous_variant 0.18
thyA 3073898 p.Ala192Ser missense_variant 0.25
thyA 3073902 c.570C>G synonymous_variant 0.25
thyA 3073917 c.555C>A synonymous_variant 0.4
thyA 3073920 c.552C>G synonymous_variant 0.43
thyA 3073925 c.547T>C synonymous_variant 0.38
thyA 3073929 c.543T>C synonymous_variant 0.25
thyA 3073953 c.519T>C synonymous_variant 0.29
thyA 3073977 c.495A>G synonymous_variant 0.31
thyA 3073989 c.483T>C synonymous_variant 0.43
thyA 3074001 c.471C>G synonymous_variant 0.43
thyA 3074004 c.468T>C synonymous_variant 0.43
thyA 3074010 c.462C>G synonymous_variant 0.43
thyA 3074028 c.444G>C synonymous_variant 0.33
thyA 3074031 c.441T>C synonymous_variant 0.33
thyA 3074045 c.427C>T synonymous_variant 0.41
thyA 3074053 p.Arg140Gln missense_variant 0.36
thyA 3074056 p.Glu139Pro missense_variant 0.38
thyA 3074079 c.393G>C synonymous_variant 0.31
thyA 3074097 c.375C>G synonymous_variant 0.15
thyA 3074100 c.372T>C synonymous_variant 0.21
thyA 3074106 c.366T>C synonymous_variant 0.2
thyA 3074118 c.354G>A synonymous_variant 0.25
thyA 3074127 c.345G>C synonymous_variant 0.25
thyA 3074214 c.258T>C synonymous_variant 0.21
ald 3086788 c.-32T>C upstream_gene_variant 1.0
ald 3087608 c.789A>G synonymous_variant 0.16
ald 3087617 c.798T>C synonymous_variant 0.18
ald 3087620 c.801A>C synonymous_variant 0.18
ald 3087621 p.Ala268Ser missense_variant 0.17
ald 3087641 c.822T>C synonymous_variant 0.29
ald 3087647 c.828A>G synonymous_variant 0.27
ald 3087649 p.Gly277Asp missense_variant 0.27
ald 3087653 c.834A>G synonymous_variant 0.29
ald 3087656 c.837A>G synonymous_variant 0.29
ald 3087665 c.846C>G synonymous_variant 0.29
ald 3087666 p.Tyr283His missense_variant 0.29
ald 3087672 p.His285Asp missense_variant 0.31
ald 3087680 c.861G>C synonymous_variant 0.31
ald 3087685 p.Ala289Val missense_variant 0.33
ald 3087699 p.Leu294Val missense_variant 0.2
ald 3087704 c.885T>C synonymous_variant 0.18
ald 3087716 c.897G>C synonymous_variant 0.18
ald 3087761 c.942C>G synonymous_variant 0.14
ald 3087776 c.957G>C synonymous_variant 0.17
ald 3087787 p.Glu323Ala missense_variant 0.19
ald 3087791 c.972T>C synonymous_variant 0.19
ald 3087799 p.His327Arg missense_variant 0.21
ald 3087821 c.1002G>C synonymous_variant 0.23
ald 3087825 p.Asn336Asp missense_variant 0.24
ald 3087829 p.Pro337Gln missense_variant 0.16
ald 3087833 c.1014A>T synonymous_variant 0.17
ald 3087836 c.1017A>G synonymous_variant 0.17
ald 3087838 p.Ala340Gly missense_variant 0.16
fbiD 3339284 p.Leu56Pro missense_variant 0.25
fprA 3473812 c.-195G>A upstream_gene_variant 0.15
fprA 3473996 c.-11_-10insA upstream_gene_variant 1.0
whiB7 3568521 p.Leu53Phe missense_variant 0.15
Rv3236c 3612813 p.Thr102Ala missense_variant 1.0
fbiB 3641689 p.Val52Ala missense_variant 0.16
fbiB 3641717 c.183T>G synonymous_variant 0.17
alr 3840980 c.441G>C synonymous_variant 0.15
alr 3840994 p.His143Asp missense_variant 0.17
alr 3840997 c.424T>C synonymous_variant 0.17
alr 3841001 c.420A>G synonymous_variant 0.18
alr 3841010 c.411A>G synonymous_variant 0.18
alr 3841017 p.Leu135Glu missense_variant 0.18
alr 3841022 c.399C>G synonymous_variant 0.22
alr 3841028 c.393G>C synonymous_variant 0.2
alr 3841033 p.Val130Ile missense_variant 0.2
alr 3841037 p.Val128Ile missense_variant 0.2
rpoA 3877527 c.981C>G synonymous_variant 0.17
rpoA 3877553 p.Glu319Gln missense_variant 0.17
rpoA 3877587 c.921A>G synonymous_variant 0.17
rpoA 3877613 p.Ile299Val missense_variant 0.22
rpoA 3877656 c.852T>G synonymous_variant 0.24
rpoA 3877668 c.840A>G synonymous_variant 0.17
rpoA 3877818 c.690A>G synonymous_variant 0.18
rpoA 3877839 c.669G>C synonymous_variant 0.18
rpoA 3877848 c.660C>T synonymous_variant 0.19
rpoA 3877857 c.651G>A synonymous_variant 0.19
rpoA 3877866 c.642G>C synonymous_variant 0.19
rpoA 3877875 c.633T>G synonymous_variant 0.19
rpoA 3877962 c.546G>T synonymous_variant 0.25
rpoA 3877986 c.522G>C synonymous_variant 0.19
rpoA 3877989 c.519A>G synonymous_variant 0.23
rpoA 3878001 c.507A>G synonymous_variant 0.24
rpoA 3878022 c.486T>C synonymous_variant 0.29
rpoA 3878028 c.480G>C synonymous_variant 0.21
rpoA 3878031 c.477T>C synonymous_variant 0.22
rpoA 3878040 c.468T>C synonymous_variant 0.26
rpoA 3878046 c.462T>A synonymous_variant 0.26
rpoA 3878055 c.453A>G synonymous_variant 0.26
rpoA 3878058 c.450G>T synonymous_variant 0.26
rpoA 3878061 c.447G>C synonymous_variant 0.26
rpoA 3878067 c.441C>G synonymous_variant 0.24
rpoA 3878070 c.438T>C synonymous_variant 0.22
rpoA 3878076 c.432C>T synonymous_variant 0.24
rpoA 3878094 c.414C>G synonymous_variant 0.19
rpoA 3878106 c.402G>C synonymous_variant 0.16
rpoA 3878130 c.378C>G synonymous_variant 0.17
rpoA 3878205 c.303T>C synonymous_variant 0.19
rpoA 3878217 c.291A>G synonymous_variant 0.19
rpoA 3878226 c.282C>G synonymous_variant 0.31
rpoA 3878232 c.276G>C synonymous_variant 0.39
rpoA 3878247 c.261G>C synonymous_variant 0.42
rpoA 3878271 c.237T>C synonymous_variant 0.39
rpoA 3878276 c.232C>T synonymous_variant 0.39
rpoA 3878283 p.Glu75Ala missense_variant 0.39
rpoA 3878292 c.216T>C synonymous_variant 0.34
rpoA 3878304 c.204G>C synonymous_variant 0.27
rpoA 3878313 c.195G>T synonymous_variant 0.28
rpoA 3878346 c.162T>C synonymous_variant 0.17
rpoA 3878415 c.93C>T synonymous_variant 0.27
rpoA 3878436 c.72A>G synonymous_variant 0.23
rpoA 3878442 c.66G>C synonymous_variant 0.23
rpoA 3878454 c.54A>C synonymous_variant 0.23
rpoA 3878472 p.Asp12Glu missense_variant 0.21
rpoA 3878478 c.30C>G synonymous_variant 0.21
rpoA 3878484 c.24C>A synonymous_variant 0.25
rpoA 3878490 c.18C>A synonymous_variant 0.29
rpoA 3878496 c.12A>T synonymous_variant 0.29
ddn 3986648 c.-196C>G upstream_gene_variant 0.22
clpC1 4038433 c.2272C>T synonymous_variant 0.21
clpC1 4038434 c.2271G>A synonymous_variant 0.2
clpC1 4038444 p.Ala754Lys missense_variant 0.22
clpC1 4038446 c.2259T>C synonymous_variant 0.22
clpC1 4038456 p.Val750Glu missense_variant 0.25
clpC1 4038460 p.Leu749Met missense_variant 0.28
clpC1 4038486 p.Gly740Asn missense_variant 0.53
clpC1 4038489 p.Ala739Gly missense_variant 0.53
clpC1 4038494 c.2211G>C synonymous_variant 0.57
clpC1 4038497 p.Ser736Gln missense_variant 0.53
clpC1 4038530 p.Glu725Asp missense_variant 0.52
clpC1 4038551 c.2154C>G synonymous_variant 0.47
clpC1 4038596 c.2109A>G synonymous_variant 0.39
clpC1 4038623 c.2082A>G synonymous_variant 0.36
clpC1 4038640 p.Asp689Asn missense_variant 0.26
clpC1 4038653 c.2052C>T synonymous_variant 0.25
clpC1 4038658 p.Lys683Gln missense_variant 0.21
clpC1 4038661 p.Ser682Thr missense_variant 0.21
clpC1 4038662 c.2043T>C synonymous_variant 0.21
clpC1 4038671 c.2034T>C synonymous_variant 0.3
clpC1 4038683 c.2022T>C synonymous_variant 0.23
clpC1 4038695 c.2010C>G synonymous_variant 0.24
clpC1 4038701 c.2004G>C synonymous_variant 0.24
clpC1 4038704 c.2001T>C synonymous_variant 0.25
clpC1 4038707 c.1998C>G synonymous_variant 0.24
clpC1 4038710 c.1995G>C synonymous_variant 0.24
clpC1 4038713 c.1992T>C synonymous_variant 0.25
clpC1 4038755 c.1950G>T synonymous_variant 0.32
clpC1 4038770 c.1935C>T synonymous_variant 0.32
clpC1 4038773 c.1932T>C synonymous_variant 0.32
clpC1 4038782 c.1923G>C synonymous_variant 0.32
clpC1 4038790 c.1915C>T synonymous_variant 0.31
clpC1 4038812 c.1893T>C synonymous_variant 0.16
clpC1 4038845 c.1860G>C synonymous_variant 0.24
clpC1 4038860 c.1845G>C synonymous_variant 0.22
clpC1 4038878 c.1827A>G synonymous_variant 0.29
clpC1 4038908 c.1797C>G synonymous_variant 0.32
clpC1 4038914 c.1791G>C synonymous_variant 0.35
clpC1 4038923 c.1780_1782delCTAinsTTG synonymous_variant 0.37
clpC1 4038953 c.1752A>G synonymous_variant 0.44
clpC1 4038956 c.1749T>C synonymous_variant 0.41
clpC1 4038965 c.1740T>C synonymous_variant 0.4
clpC1 4038971 c.1734T>C synonymous_variant 0.28
clpC1 4038974 c.1731T>C synonymous_variant 0.28
clpC1 4038989 c.1716T>C synonymous_variant 0.22
clpC1 4038997 c.1708T>C synonymous_variant 0.22
clpC1 4039178 c.1527G>C synonymous_variant 0.18
clpC1 4039183 c.1522T>C synonymous_variant 0.18
clpC1 4039226 c.1479T>C synonymous_variant 0.3
clpC1 4039319 c.1386T>C synonymous_variant 0.16
clpC1 4039328 c.1377A>C synonymous_variant 0.16
clpC1 4039331 c.1374C>G synonymous_variant 0.16
clpC1 4039337 p.Thr456Lys missense_variant 0.17
clpC1 4039349 c.1356C>T synonymous_variant 0.2
clpC1 4039352 c.1353C>G synonymous_variant 0.21
clpC1 4039364 c.1341C>G synonymous_variant 0.2
clpC1 4039391 c.1314T>G synonymous_variant 0.27
clpC1 4039409 c.1296T>C synonymous_variant 0.25
clpC1 4039412 c.1293T>G synonymous_variant 0.25
clpC1 4039415 p.Glu430Asp missense_variant 0.25
clpC1 4039442 c.1263A>G synonymous_variant 0.25
clpC1 4039664 c.1041G>C synonymous_variant 0.23
clpC1 4039694 c.1011G>C synonymous_variant 0.26
clpC1 4039724 c.981A>G synonymous_variant 0.3
clpC1 4039751 c.954A>G synonymous_variant 0.23
clpC1 4039757 c.948A>G synonymous_variant 0.25
clpC1 4039760 c.945T>C synonymous_variant 0.21
clpC1 4039766 c.939T>C synonymous_variant 0.19
clpC1 4039769 c.936C>G synonymous_variant 0.19
clpC1 4039775 c.930G>C synonymous_variant 0.19
clpC1 4039778 c.927A>G synonymous_variant 0.19
clpC1 4039781 c.924G>T synonymous_variant 0.18
clpC1 4039790 c.915C>G synonymous_variant 0.18
clpC1 4039805 c.900C>A synonymous_variant 0.18
clpC1 4039817 c.888A>T synonymous_variant 0.16
clpC1 4039820 c.885T>C synonymous_variant 0.17
clpC1 4039826 c.879C>G synonymous_variant 0.24
clpC1 4039831 c.874T>C synonymous_variant 0.24
clpC1 4039850 c.855T>C synonymous_variant 0.25
clpC1 4039865 c.840T>C synonymous_variant 0.28
clpC1 4039898 c.807C>G synonymous_variant 0.28
clpC1 4039928 c.775_777delAGCinsTCG synonymous_variant 0.21
clpC1 4039931 c.774T>C synonymous_variant 0.25
clpC1 4039937 c.768G>C synonymous_variant 0.23
clpC1 4039946 c.759A>C synonymous_variant 0.25
clpC1 4039952 c.753T>C synonymous_variant 0.24
clpC1 4039958 c.747G>C synonymous_variant 0.3
clpC1 4039979 c.726C>G synonymous_variant 0.32
clpC1 4039988 c.717C>G synonymous_variant 0.35
clpC1 4039991 c.714G>C synonymous_variant 0.35
clpC1 4040021 c.684A>C synonymous_variant 0.38
clpC1 4040024 c.681A>G synonymous_variant 0.38
clpC1 4040033 c.672G>C synonymous_variant 0.35
clpC1 4040105 c.600C>G synonymous_variant 0.16
clpC1 4040644 c.61A>C synonymous_variant 0.2
clpC1 4040654 c.51G>A synonymous_variant 0.2
clpC1 4040657 c.48T>G synonymous_variant 0.2
panD 4044105 c.177G>C synonymous_variant 0.18
panD 4044117 c.165G>C synonymous_variant 0.2
panD 4044120 c.162A>G synonymous_variant 0.2
panD 4044123 c.159T>C synonymous_variant 0.2
panD 4044138 c.144T>C synonymous_variant 0.18
panD 4044150 c.132A>G synonymous_variant 0.2
embC 4239973 c.111T>G synonymous_variant 0.4
embC 4240670 p.Thr270Leu missense_variant 0.18
embC 4240678 c.816T>G synonymous_variant 0.22
embC 4240685 p.Thr275Ala missense_variant 0.24
embC 4240693 c.831T>C synonymous_variant 0.25
embC 4240699 c.837C>G synonymous_variant 0.26
embC 4240726 c.864G>C synonymous_variant 0.22
embC 4240780 c.918T>C synonymous_variant 0.26
embC 4240783 c.921G>C synonymous_variant 0.26
embC 4240789 c.927T>C synonymous_variant 0.29
embC 4240819 c.957A>G synonymous_variant 0.32
embC 4240828 c.966G>C synonymous_variant 0.33
embC 4240831 c.969T>C synonymous_variant 0.31
embC 4241506 c.1644G>C synonymous_variant 0.16
embC 4241518 c.1656A>G synonymous_variant 0.17
embC 4241521 c.1659T>C synonymous_variant 0.19
embC 4241527 c.1665C>G synonymous_variant 0.19
embC 4241530 c.1668C>A synonymous_variant 0.19
embC 4241536 c.1674A>G synonymous_variant 0.19
embC 4241539 c.1677T>C synonymous_variant 0.22
embC 4241545 c.1683T>C synonymous_variant 0.21
embC 4241548 c.1686T>C synonymous_variant 0.22
embC 4241551 c.1689A>G synonymous_variant 0.22
embC 4241567 p.Ile569Val missense_variant 0.33
embC 4241572 c.1710C>G synonymous_variant 0.33
embC 4241578 c.1716G>C synonymous_variant 0.33
embC 4241584 c.1722T>C synonymous_variant 0.36
embC 4241591 p.Leu577Val missense_variant 0.4
embC 4241611 c.1749G>C synonymous_variant 0.3
embC 4241614 c.1752A>C synonymous_variant 0.3
embC 4241626 c.1764T>C synonymous_variant 0.43
embC 4241635 c.1773G>C synonymous_variant 0.4
embC 4241644 c.1782G>C synonymous_variant 0.22
embC 4241647 c.1785G>A synonymous_variant 0.22
embC 4241648 c.1786T>C synonymous_variant 0.22
embC 4241665 c.1803G>C synonymous_variant 0.2
embC 4241671 c.1809T>G synonymous_variant 0.27
embC 4241691 p.Gly610Ala missense_variant 0.2
embC 4241694 p.Ala611Val missense_variant 0.21
embC 4241698 c.1836G>C synonymous_variant 0.21
embC 4241704 c.1842C>G synonymous_variant 0.2
embC 4241995 c.2133C>G synonymous_variant 0.18
embC 4242002 p.Leu714Val missense_variant 0.17
embA 4242643 c.-590C>T upstream_gene_variant 1.0
embA 4243460 c.228C>T synonymous_variant 1.0
embA 4244572 p.Arg447Leu missense_variant 0.15
embA 4244831 p.Phe533Leu missense_variant 0.14
embA 4245056 c.1824C>G synonymous_variant 0.22
embA 4245060 c.1828T>C synonymous_variant 0.2
embA 4245077 c.1845G>C synonymous_variant 0.38
embA 4245083 c.1851A>C synonymous_variant 0.38
embA 4245101 c.1869G>C synonymous_variant 0.33
embA 4245137 c.1905T>C synonymous_variant 0.3
embA 4245146 c.1914G>A synonymous_variant 0.25
embA 4245149 c.1917C>G synonymous_variant 0.25
embA 4245167 c.1935G>A synonymous_variant 0.24
embA 4245173 c.1941G>C synonymous_variant 0.24
embA 4245198 p.Leu656Ile missense_variant 0.17
embA 4245811 p.Pro860Leu missense_variant 0.14
embA 4245815 c.2584_2587delCGCA frameshift_variant 0.17
embB 4245834 c.-680C>T upstream_gene_variant 0.15
embB 4245860 c.-654C>G upstream_gene_variant 0.15
embB 4245917 c.-597G>A upstream_gene_variant 0.14
embA 4246020 p.Ala930Thr missense_variant 0.14
embB 4246115 c.-399T>G upstream_gene_variant 0.23
embA 4246128 p.Ser966Thr missense_variant 0.23
embB 4247371 c.858C>G synonymous_variant 0.16
embB 4247375 p.Leu288Val missense_variant 0.17
embB 4247386 c.873T>C synonymous_variant 0.16
embB 4247389 c.876C>G synonymous_variant 0.16
embB 4247425 c.912G>C synonymous_variant 0.17
embB 4247437 c.924A>G synonymous_variant 0.17
embB 4247440 c.927C>G synonymous_variant 0.17
embB 4248094 c.1581C>T synonymous_variant 0.17
embB 4248097 c.1584C>G synonymous_variant 0.19
embB 4248130 c.1617G>C synonymous_variant 0.22
embB 4248133 c.1620C>G synonymous_variant 0.22
embB 4248145 p.Leu544Phe missense_variant 0.21
embB 4248157 c.1644A>G synonymous_variant 0.19
embB 4249432 c.2919A>G synonymous_variant 0.18
embB 4249441 c.2928A>G synonymous_variant 0.18
embB 4249444 c.2931T>C synonymous_variant 0.2
embB 4249447 c.2934G>C synonymous_variant 0.2
embB 4249469 p.Leu986Met missense_variant 0.25
aftB 4267647 p.Asp397Gly missense_variant 1.0
ubiA 4269075 p.Ile253Val missense_variant 0.24
aftB 4269081 c.-245G>C upstream_gene_variant 0.21
aftB 4269084 c.-248G>C upstream_gene_variant 0.2
aftB 4269189 c.-353C>T upstream_gene_variant 0.14
ethR 4327928 p.Ala127Asp missense_variant 0.2
whiB6 4338595 c.-75delG upstream_gene_variant 1.0
gid 4407588 c.615A>G synonymous_variant 1.0
gid 4407927 p.Glu92Asp missense_variant 1.0
gid 4408421 c.-219C>A upstream_gene_variant 0.29