SRR3675574
|
Other
|
lineage4.6.3;lineage4.9;lineage6.3
|
None
|
ERR4798099
|
Other
|
lineage4.9
|
None
|
ERR1063857
|
MDR-TB
|
La2;lineage4.9
|
None
|
SRR12708407
|
HR-TB
|
lineage4.3.2.1
|
None
|
SRR3675267
|
Other
|
La1.7;lineage4.9
|
None
|
SRR6045526
|
Other
|
lineage4.9
|
None
|
ERR1873396
|
Pre-XDR-TB
|
M.canetti;lineage2.2
|
None
|
ERR4816551
|
HR-TB
|
lineage4.1.1.3
|
None
|
ERR9787256
|
Other
|
lineage6.1.3
|
None
|
SRR18910194
|
HR-TB
|
lineage2.2.2
|
None
|
ERR2446566
|
Other
|
lineage4.9
|
None
|
ERR3797015
|
HR-TB
|
lineage4.9
|
None
|
ERR4769521
|
RR-TB
|
lineage4.9
|
None
|
SRR5341330
|
Other
|
lineage4.9
|
None
|
ERR5311078
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4799478
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9119525
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR161033
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4872119
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR3445503
|
Other
|
La1.7.1;La1.7.X-unk4
|
None
|
SRR15014655
|
Other
|
M.canetti;lineage1
|
None
|
SRR10808805
|
Other
|
La1;lineage4.9
|
None
|
SRR6458423
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6511621
|
Sensitive
|
lineage4.9
|
None
|
ERR1063862
|
HR-TB
|
lineage4.9
|
None
|
ERR278594
|
HR-TB
|
lineage2.1;lineage4.9
|
None
|
SRR6045399
|
Other
|
M.canetti;lineage4.9
|
None
|
ERR1023295
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.2.1
|
None
|
ERR4811311
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR1063859
|
HR-TB
|
La1.7.1;lineage4.9
|
None
|
ERR5311089
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4817731
|
HR-TB
|
lineage4.9
|
None
|
SRR13423544
|
Other
|
lineage4.5
|
None
|
SRR6325444
|
MDR-TB
|
M.canetti;lineage2.1;lineage6.3
|
None
|
SRR5341453
|
Other
|
lineage4.9
|
None
|
ERR4188350
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR12416842
|
HR-TB
|
lineage4.9
|
None
|
ERR1063849
|
HR-TB
|
lineage4.9
|
None
|
SRR3675449
|
Other
|
M.canetti;lineage4.9
|
None
|
SRR3675246
|
Other
|
lineage4.9
|
None
|
SRR9970978
|
Sensitive
|
La1;lineage4.1.2
|
None
|
SRR1172796
|
Sensitive
|
lineage2.2.1.2
|
None
|
ERR702404
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR1034634
|
HR-TB
|
lineage4.9
|
None
|
SRR28868888
|
Other
|
lineage1.1.3.2
|
None
|
ERR3799304
|
Other
|
lineage6.1.1
|
None
|
SRR6045785
|
MDR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
ERR736834
|
Sensitive
|
lineage4.9
|
None
|
SRR26331611
|
Sensitive
|
lineage4.9
|
None
|
SRR6079962
|
HR-TB
|
lineage2.2.1.1
|
None
|
SRR3675320
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9
|
None
|
ERR3283018
|
HR-TB
|
lineage4.9
|
None
|
ERR323033
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3077978
|
RR-TB
|
lineage1.1
|
None
|
ERR323054
|
MDR-TB
|
La3;M.canetti;lineage3.1
|
None
|
ERR323041
|
HR-TB
|
M.canetti;lineage2.1
|
None
|
SRR6046026
|
RR-TB
|
lineage4.2;lineage4.9
|
None
|
ERR4797264
|
Sensitive
|
lineage4.9
|
None
|
SRR20970016
|
Other
|
lineage2.2
|
None
|
SRR3675554
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6325442
|
HR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
SRR6789621
|
Other
|
lineage4.9
|
None
|
ERR473314
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR126600
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR181824
|
HR-TB
|
lineage4.9
|
None
|
SRR12142341
|
HR-TB
|
lineage2.1
|
None
|
ERR176778
|
HR-TB
|
lineage4.9
|
None
|
ERR323047
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4819422
|
HR-TB
|
lineage4.9
|
None
|
ERR6866022
|
Other
|
lineage4.8;lineage4.9
|
None
|
ERR736875
|
HR-TB
|
lineage4.9
|
None
|
SRR6045555
|
Other
|
lineage4.9
|
None
|
SRR1167384
|
Other
|
La3;lineage4.9
|
None
|
SRR3675510
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR4796254
|
Sensitive
|
lineage4.9
|
None
|
ERR6358837
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR3797023
|
HR-TB
|
La1.8.1
|
None
|
ERR4819241
|
Other
|
lineage4.9
|
None
|
ERR1034652
|
Other
|
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
|
None
|
ERR176651
|
Other
|
lineage4.9
|
None
|
ERR176658
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3283040
|
HR-TB
|
lineage4.9
|
None
|
SRR3675508
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3468607
|
Other
|
lineage4.9
|
None
|
ERR2693229
|
RR-TB
|
La3;M.canetti;lineage4.9
|
None
|
ERR323063
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR11252736
|
Other
|
lineage4.9
|
None
|
SRR1175127
|
Other
|
lineage2.2.1.2
|
None
|
ERR2514327
|
HR-TB
|
lineage4.8
|
None
|
ERR323058
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR176568
|
HR-TB
|
La3;lineage2.1;lineage4.9
|
None
|
ERR2693239
|
RR-TB
|
M.canetti;lineage2.1;lineage4
|
None
|
SRR1710057
|
Other
|
lineage2.1
|
None
|
ERR4811075
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1183049
|
RR-TB
|
lineage2.2
|
None
|
ERR5311081
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675501
|
Other
|
La1.7;lineage4.9
|
None
|
SRR1792478
|
HR-TB
|
La1.7.1
|
None
|
ERR4811142
|
RR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR20969708
|
HR-TB
|
lineage2.2
|
None
|
ERR3797028
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
ERR2026697
|
HR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
|
None
|
SRR5341341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR736863
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1181020
|
Other
|
lineage2.2.1
|
None
|
ERR323040
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR1035138
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
SRR1184312
|
Other
|
lineage2.2.1
|
None
|
ERR4811105
|
HR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR3675486
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR9786444
|
Sensitive
|
lineage4.8
|
None
|
ERR9786526
|
Other
|
lineage4.1;lineage4.8
|
None
|
SRR1173706
|
Other
|
lineage4.9
|
None
|
ERR3468544
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6045347
|
Other
|
lineage4.9
|
None
|
SRR6045219
|
HR-TB
|
lineage4.9
|
None
|
ERR4797184
|
Sensitive
|
lineage4.9
|
None
|
SAMEA2533358
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR124636
|
Sensitive
|
lineage4.9
|
None
|
ERR161039
|
HR-TB
|
La3;lineage4.3.4
|
None
|
ERR9119138
|
RR-TB
|
M.canetti;lineage4.3.1;lineage4.9
|
None
|
ERR1873492
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
ERR3283016
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR9970981
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR6045327
|
Other
|
lineage2.1;lineage4.3.2;lineage4.9
|
None
|
SRR6046720
|
HR-TB
|
lineage4.9;lineage9
|
None
|
SRR1791696
|
Other
|
La1.8.1
|
None
|
SRR6044942
|
HR-TB
|
lineage4.9
|
None
|
ERR3273109
|
HR-TB
|
lineage4
|
None
|
SRR3675561
|
Other
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR2229143
|
RR-TB
|
lineage4.9
|
None
|
ERR176779
|
HR-TB
|
lineage4.9
|
None
|
DRR188519
|
Other
|
lineage4.4.2
|
None
|
ERR323053
|
MDR-TB
|
La2;lineage4.9;lineage9
|
None
|
SRR3675464
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3;lineage8
|
None
|
ERR4819877
|
HR-TB
|
lineage4.9
|
None
|
SRR6045290
|
RR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR6045948
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR23961542
|
Other
|
La1;lineage4.9
|
None
|
ERR4816478
|
HR-TB
|
lineage4
|
None
|
ERR4816466
|
HR-TB
|
lineage4.9
|
None
|
SRR1172728
|
RR-TB
|
La3
|
None
|
ERR9786711
|
Sensitive
|
lineage4.6.2.2
|
None
|
ERR1035122
|
Sensitive
|
lineage4.9
|
None
|
ERR4872094
|
MDR-TB
|
lineage5.2
|
None
|
ERR133825
|
HR-TB
|
La1;lineage4.9
|
None
|
ERR5311099
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4816656
|
Other
|
lineage4.9
|
None
|
ERR2026696
|
MDR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
|
None
|
SRR3675441
|
Other
|
lineage4.9
|
None
|
ERR3797047
|
MDR-TB
|
lineage4.9
|
None
|
SRR1172817
|
Other
|
La3
|
None
|
SRR3675450
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR3797086
|
Sensitive
|
lineage4.9
|
None
|
SRR3675494
|
RR-TB
|
lineage4.9
|
None
|
ERR9787153
|
Other
|
lineage6.1.3
|
None
|
ERR5311102
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3283017
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9
|
None
|
ERR212125
|
HR-TB
|
lineage4.9
|
None
|
ERR8976043
|
HR-TB
|
lineage2.1;lineage2.2;lineage6.3
|
None
|
SRR6045887
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
SRR29096174
|
Sensitive
|
La1.7;lineage4.9
|
None
|
SRR23961549
|
Other
|
La1.2
|
None
|
ERR1873393
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR6046485
|
Other
|
lineage4.9
|
None
|
ERR4024991
|
Other
|
lineage4.8;lineage4.9
|
None
|
ERR4814536
|
MDR-TB
|
M.canetti;lineage2.1;lineage3
|
None
|
SRR11662690
|
HR-TB
|
lineage4.9
|
None
|
SRR1165584
|
Other
|
lineage4.1.2.1
|
None
|
ERR4811493
|
HR-TB
|
lineage4.9
|
None
|
SRR14066533
|
Sensitive
|
lineage1.1.1
|
None
|
ERR9119500
|
MDR-TB
|
lineage5.2
|
None
|
ERR9786843
|
Other
|
|
None
|
ERR2514692
|
Other
|
|
None
|
ERR212001
|
HR-TB
|
|
None
|
ERR124652
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1162864
|
Other
|
lineage4.1.2.1
|
None
|
SRR6046295
|
HR-TB
|
lineage4.2;lineage4.9
|
None
|
ERR3283055
|
HR-TB
|
lineage4.9
|
None
|
ERR7911670
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
SRR29231479
|
RR-TB
|
lineage4.9
|
None
|
ERR3445502
|
Sensitive
|
lineage4.9;lineage7
|
None
|
ERR736835
|
HR-TB
|
La1.7;M.canetti;lineage4.9
|
None
|
SRR3675243
|
Other
|
lineage4.9
|
None
|
SRR3675545
|
Other
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR6866807
|
Other
|
lineage4.9
|
None
|
ERR3797016
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR1063858
|
HR-TB
|
lineage4.9
|
None
|
SRR7236177
|
Other
|
La1.8.1
|
None
|
SRR6045010
|
Sensitive
|
lineage4.9
|
None
|
SRR1173778
|
Other
|
lineage4.9
|
None
|
ERR4818929
|
HR-TB
|
lineage4.9
|
None
|
ERR4188342
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3797029
|
Other
|
lineage4.9
|
None
|
SRR3675571
|
HR-TB
|
M.canetti;lineage4.2;lineage4.9
|
None
|
ERR1035239
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR9787014
|
Other
|
lineage6.1.1
|
None
|
ERR2026698
|
HR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
|
None
|
ERR1063856
|
HR-TB
|
M.canetti;lineage4.9;lineage9
|
None
|
ERR2693242
|
RR-TB
|
lineage2.1;lineage4.9
|
None
|
SRR6046514
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3742657
|
Pre-XDR-TB
|
La3;M.canetti;lineage2.2.1
|
None
|
ERR294248
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
SRR3675520
|
Other
|
La1.7.X-unk4;lineage4.9
|
None
|
ERR5311083
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR1063839
|
MDR-TB
|
La2;lineage2.2
|
None
|
ERR323034
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage3.1
|
None
|
SRR18003019
|
Other
|
lineage2.2.1
|
None
|
SRR5535933
|
Other
|
lineage4.9
|
None
|
ERR2026695
|
MDR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
|
None
|
SRR3416776
|
Other
|
lineage2.1
|
None
|
ERR3797083
|
RR-TB
|
lineage4.9
|
None
|
SRR9970980
|
HR-TB
|
lineage4.1.2
|
None
|
ERR473277
|
HR-TB
|
La3;M.canetti;lineage4.9
|
None
|
SRR1791747
|
Other
|
La1.8.1
|
None
|
ERR5311101
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR323039
|
HR-TB
|
La2;lineage4.9
|
None
|
ERR124642
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
ERR702405
|
Sensitive
|
lineage4.9
|
None
|
ERR126608
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1166821
|
Other
|
lineage4.1.2.1
|
None
|
SRR6325445
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR1165628
|
Other
|
La3;lineage4.9
|
None
|
SRR3675269
|
RR-TB
|
lineage4.9
|
None
|
ERR181887
|
Other
|
lineage4.9
|
None
|
SRR10809074
|
Sensitive
|
lineage4.9
|
None
|
SRR5341384
|
HR-TB
|
lineage4.9
|
None
|
ERR502510
|
Sensitive
|
lineage4.9
|
None
|
ERR3283030
|
HR-TB
|
lineage4.9
|
None
|
ERR323045
|
HR-TB
|
lineage1;lineage4.9
|
None
|
SRR6046133
|
HR-TB
|
lineage4.9
|
None
|
SRR3675235
|
Sensitive
|
lineage4.9
|
None
|
SRR21733183
|
RR-TB
|
lineage1.1.2
|
None
|
SRR6046783
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
ERR323064
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4798648
|
MDR-TB
|
lineage3.1.2.2
|
None
|
ERR5917710
|
Other
|
lineage4.1.2.1
|
None
|
ERR294266
|
HR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
ERR3797036
|
HR-TB
|
lineage2.1;lineage4.1.4;lineage4.9
|
None
|
SRR6325447
|
MDR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
ERR5311082
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9
|
None
|
SRR3675481
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4815441
|
HR-TB
|
lineage4.9
|
None
|
SRR5709967
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3283021
|
HR-TB
|
lineage4.9
|
None
|
SRR3675515
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR126618
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR176643
|
Other
|
La3;lineage4.9
|
None
|
ERR736859
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR176766
|
HR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR3445501
|
HR-TB
|
La1.7.1;La1.7.X-unk4;lineage7
|
None
|
ERR323055
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR12416840
|
MDR-TB
|
lineage4.9
|
None
|
ERR3797046
|
HR-TB
|
lineage4.9
|
None
|
ERR5311096
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SAMN02414850
|
Other
|
lineage4.1.2.1
|
None
|
SRR5341315
|
Other
|
La1.7;lineage3;lineage4.9;lineage7
|
None
|
SRR5341422
|
HR-TB
|
La1.7;lineage4.9;lineage7
|
None
|
SRR23961559
|
Other
|
La1.7;lineage4.2
|
None
|
ERR5908228
|
RR-TB
|
lineage4.3.3
|
None
|
ERR5311090
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675585
|
Sensitive
|
lineage4.9
|
None
|
ERR4796929
|
Sensitive
|
lineage4.9
|
None
|
ERR4818110
|
Sensitive
|
lineage4.9
|
None
|
ERR323038
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR386953
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR9119096
|
RR-TB
|
lineage4.3.3
|
None
|
ERR3283025
|
MDR-TB
|
La1.7;lineage4.9
|
None
|
SRR6046196
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
SRR6325448
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR11252612
|
Other
|
La3;lineage4.9
|
None
|
SRR8552928
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR2509673
|
Other
|
lineage2.2.1
|
None
|
ERR4769497
|
Other
|
La1;lineage4.9
|
None
|
SRR6044815
|
Other
|
lineage4.9
|
None
|
ERR3801503
|
Sensitive
|
lineage4.6.2.2
|
None
|
SRR3675487
|
Other
|
M.canetti;lineage4.9
|
None
|
ERR2514821
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4797474
|
Sensitive
|
lineage4.9
|
None
|
ERR9786525
|
Other
|
lineage4.1;lineage4.8
|
None
|
SRR1184372
|
MDR-TB
|
|
None
|
SRR7240492
|
HR-TB
|
La1.7.1
|
None
|
SRR1173453
|
Other
|
lineage4.4.1.1
|
None
|
SRR13861322
|
Other
|
lineage4.9
|
None
|
SRR3675558
|
HR-TB
|
M.canetti;lineage4.1.1.3;lineage6.3;lineage8
|
None
|
SRR1640750
|
Other
|
|
None
|
SRR3675568
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8
|
None
|
SRR3675444
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4831545
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
ERR3275196
|
Other
|
lineage2.2.1
|
nl
|
ERR323060
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR5311098
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR3675505
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
ERR323044
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
ERR038268
|
HR-TB
|
La3;M.canetti;lineage4.8;lineage4.9
|
None
|
SRR6045952
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3283042
|
Other
|
lineage4.9
|
None
|
SRR1180137
|
Other
|
lineage2.2.1
|
None
|
SRR19304036
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR3675322
|
HR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9
|
None
|
ERR181744
|
HR-TB
|
La3;lineage4.9
|
None
|
SRR25827418
|
XDR-TB
|
lineage3.1;lineage9
|
None
|
ERR6866547
|
Other
|
La1.7;lineage4.9;lineage6
|
None
|
ERR4810741
|
HR-TB
|
La3;lineage2.1;lineage6.3
|
None
|
SRR1165506
|
Other
|
lineage4.1.2.1
|
None
|
SRR3742665
|
HR-TB
|
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
ERR161034
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
ERR1063896
|
Sensitive
|
|
None
|
ERR2199988
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR4831546
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
ERR502511
|
Sensitive
|
lineage4.9
|
None
|
SRR3675506
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1173629
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR5341313
|
Sensitive
|
La1.7;lineage4.9;lineage7
|
None
|
SRR3675482
|
Other
|
lineage4.9
|
None
|
ERR4811022
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR772255
|
MDR-TB
|
lineage2.1;lineage4.3.2
|
None
|
ERR550637
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR9119669
|
HR-TB
|
lineage4.9
|
None
|
ERR5162090
|
RR-TB
|
lineage4.9
|
None
|
ERR124651
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
SRR6046210
|
Other
|
lineage4.9
|
None
|
SRR5341432
|
Sensitive
|
La1.7;lineage4.9;lineage7
|
None
|
ERR5311100
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4820773
|
HR-TB
|
lineage4.9
|
None
|
ERR323036
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR323108
|
HR-TB
|
La1.7;lineage4.9
|
None
|
SRR20969731
|
Other
|
lineage2.2.1
|
None
|
SRR14801759
|
HR-TB
|
La1.7;lineage4.9
|
None
|