TB-Profiler result

Run: SRR1172796
Summary

Run ID: SRR1172796

Sample name:

Date: 03-04-2023 03:10:33

Number of reads: 1289064

Percentage reads mapped: 61.62

Strain: lineage2.2.1.2

Drug-resistance: Sensitive

Download CSV Download TXT Download PDF Download JSON
Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage2 East-Asian Beijing RD105 0.97
lineage2.2 East-Asian (Beijing) Beijing-RD207 RD105;RD207 0.99
lineage2.2.1 East-Asian (Beijing) Beijing-RD181 RD105;RD207;RD181 0.92
lineage2.2.1.2 East-Asian (Beijing) Beijing-RD142 RD105;RD207;RD181;RD142 0.94
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrA 7362 p.Glu21Gln missense_variant 1.0
gyrA 7376 c.75G>A synonymous_variant 0.17
gyrA 7382 c.81C>T synonymous_variant 0.2
gyrA 7391 c.90C>T synonymous_variant 0.19
gyrA 7394 c.93T>C synonymous_variant 0.18
gyrA 7412 c.111C>G synonymous_variant 0.27
gyrA 7418 c.117C>G synonymous_variant 0.27
gyrA 7427 c.126G>C synonymous_variant 0.27
gyrA 7433 c.132G>C synonymous_variant 0.27
gyrA 7436 c.135C>T synonymous_variant 0.3
gyrA 7442 c.141G>C synonymous_variant 0.3
gyrA 7451 c.150C>G synonymous_variant 0.32
gyrA 7472 c.171T>C synonymous_variant 0.34
gyrA 7475 c.174A>G synonymous_variant 0.33
gyrA 7484 c.183T>C synonymous_variant 0.36
gyrA 7490 c.189C>G synonymous_variant 0.38
gyrA 7506 p.Ser69Gly missense_variant 0.43
gyrA 7526 c.225G>C synonymous_variant 0.46
gyrA 7532 c.231T>C synonymous_variant 0.48
gyrA 7541 c.240C>G synonymous_variant 0.44
gyrA 7547 c.246C>T synonymous_variant 0.46
gyrA 7559 c.258G>A synonymous_variant 0.4
gyrA 7562 c.261C>T synonymous_variant 0.38
gyrA 7569 p.Ala90Ser missense_variant 0.4
gyrA 7585 p.Ser95Thr missense_variant 1.0
gyrA 7595 c.294C>G synonymous_variant 0.27
gyrA 7607 c.306C>G synonymous_variant 0.18
gyrA 7715 c.414G>C synonymous_variant 0.19
gyrA 7728 c.427_429delAGGinsCGC synonymous_variant 0.21
gyrA 7763 c.462T>G synonymous_variant 0.37
gyrA 7775 c.474C>T synonymous_variant 0.39
gyrA 7784 c.483A>G synonymous_variant 0.42
gyrA 7799 c.498A>G synonymous_variant 0.4
gyrA 7814 c.513C>G synonymous_variant 0.32
gyrA 7832 c.531G>C synonymous_variant 0.37
gyrA 7835 c.534A>C synonymous_variant 0.32
gyrA 7859 c.558A>G synonymous_variant 0.31
gyrA 7865 c.564T>C synonymous_variant 0.27
gyrA 7871 c.570G>C synonymous_variant 0.26
gyrA 7883 c.582G>C synonymous_variant 0.18
gyrA 7884 p.Arg195Gly missense_variant 0.19
gyrA 7898 p.Asp199Glu missense_variant 0.18
gyrA 7911 p.Ala204Cys missense_variant 0.18
gyrA 7922 c.621T>C synonymous_variant 0.17
gyrA 7928 p.Asp209Glu missense_variant 0.15
gyrA 8324 c.1023T>C synonymous_variant 0.27
gyrA 8339 c.1038A>C synonymous_variant 0.3
gyrA 8340 p.Ala347Ser missense_variant 0.31
gyrA 8366 c.1065G>C synonymous_variant 0.45
gyrA 8378 c.1077C>T synonymous_variant 0.44
gyrA 8382 p.Leu361Met missense_variant 0.47
gyrA 8393 c.1092T>C synonymous_variant 0.49
gyrA 8399 c.1098T>C synonymous_variant 0.44
gyrA 8401 p.Asp367Ala missense_variant 0.42
gyrA 8414 c.1113C>T synonymous_variant 0.43
gyrA 8417 c.1116C>G synonymous_variant 0.43
gyrA 8420 c.1119T>C synonymous_variant 0.43
gyrA 8453 c.1152A>C synonymous_variant 0.35
gyrA 8459 c.1158G>A synonymous_variant 0.31
gyrA 8462 c.1161A>G synonymous_variant 0.29
gyrA 8465 c.1164C>G synonymous_variant 0.28
gyrA 8471 c.1170T>C synonymous_variant 0.27
gyrA 8480 c.1179C>T synonymous_variant 0.24
gyrA 8486 c.1185T>C synonymous_variant 0.24
gyrA 8489 c.1188A>G synonymous_variant 0.22
gyrA 8501 c.1200G>T synonymous_variant 0.22
gyrA 8504 c.1203G>C synonymous_variant 0.22
gyrA 8516 c.1215T>C synonymous_variant 0.18
gyrA 8519 c.1218A>G synonymous_variant 0.16
gyrA 8585 c.1284C>T synonymous_variant 0.22
gyrA 8597 c.1296C>G synonymous_variant 0.27
gyrA 8603 c.1302A>G synonymous_variant 0.27
gyrA 8606 c.1305C>T synonymous_variant 0.31
gyrA 8619 c.1318T>C synonymous_variant 0.38
gyrA 8636 c.1335A>G synonymous_variant 0.39
gyrA 8642 c.1341A>G synonymous_variant 0.41
gyrA 8649 p.Arg450Lys missense_variant 0.41
gyrA 8672 c.1371A>G synonymous_variant 0.4
gyrA 8693 c.1392T>C synonymous_variant 0.33
gyrA 8705 c.1404C>T synonymous_variant 0.34
gyrA 8711 c.1410A>C synonymous_variant 0.29
gyrA 8714 c.1413A>G synonymous_variant 0.27
gyrA 8720 c.1419G>A synonymous_variant 0.24
gyrA 8726 c.1425G>A synonymous_variant 0.21
gyrA 8729 c.1428T>C synonymous_variant 0.21
gyrA 8747 c.1446A>G synonymous_variant 0.21
gyrA 8756 c.1455A>G synonymous_variant 0.17
gyrA 8801 c.1500G>C synonymous_variant 0.23
gyrA 8810 c.1509A>C synonymous_variant 0.23
gyrA 8813 c.1512C>T synonymous_variant 0.24
gyrA 8816 c.1515C>G synonymous_variant 0.23
gyrA 8817 p.Ser506Ala missense_variant 0.23
gyrA 8829 c.1528T>C synonymous_variant 0.27
gyrA 8852 c.1551T>C synonymous_variant 0.34
gyrA 8858 c.1557T>G synonymous_variant 0.35
gyrA 8867 c.1566A>G synonymous_variant 0.38
gyrA 8870 c.1569G>C synonymous_variant 0.36
gyrA 8873 c.1572A>T synonymous_variant 0.38
gyrA 8876 c.1575C>T synonymous_variant 0.41
gyrA 8903 c.1602T>C synonymous_variant 0.43
gyrA 8930 c.1629C>T synonymous_variant 0.35
gyrA 8936 c.1635G>A synonymous_variant 0.3
gyrA 8939 c.1638T>C synonymous_variant 0.32
gyrA 8942 c.1641G>C synonymous_variant 0.28
gyrA 8945 c.1644G>C synonymous_variant 0.28
gyrA 8946 c.1645_1647delTTGinsCTC synonymous_variant 0.28
gyrA 8954 c.1653G>A synonymous_variant 0.31
gyrA 8981 c.1680G>C synonymous_variant 0.19
gyrA 8996 c.1695T>C synonymous_variant 0.18
gyrA 8998 p.Leu566Trp missense_variant 0.18
gyrA 9144 c.1843_1845delCGCinsAGG synonymous_variant 0.15
gyrA 9147 p.Gly616Ser missense_variant 0.15
gyrA 9154 p.Thr618Lys missense_variant 0.14
gyrA 9174 c.1873C>T synonymous_variant 0.16
gyrA 9304 p.Gly668Asp missense_variant 1.0
gyrA 9665 c.2364A>G synonymous_variant 0.19
gyrA 9668 c.2367C>G synonymous_variant 0.19
gyrA 9683 c.2382G>C synonymous_variant 0.2
gyrA 9686 c.2385A>C synonymous_variant 0.19
gyrA 9701 c.2400T>G synonymous_variant 0.17
gyrA 9704 c.2403T>C synonymous_variant 0.17
gyrA 9716 c.2415T>C synonymous_variant 0.18
gyrA 9717 c.2416C>T synonymous_variant 0.19
gyrA 9738 p.Leu813Ile missense_variant 0.19
gyrA 9743 c.2442C>G synonymous_variant 0.14
fgd1 491106 c.324T>G synonymous_variant 0.21
fgd1 491121 c.339A>G synonymous_variant 0.19
fgd1 491133 c.351A>G synonymous_variant 0.18
fgd1 491135 p.Tyr118Phe missense_variant 0.18
fgd1 491137 p.Glu119Thr missense_variant 0.18
fgd1 491144 p.Ala121Glu missense_variant 0.2
fgd1 491151 c.369G>C synonymous_variant 0.19
fgd1 491181 c.399T>C synonymous_variant 0.23
fgd1 491191 p.Gly137Arg missense_variant 0.19
fgd1 491196 c.414A>G synonymous_variant 0.19
fgd1 491244 c.462T>C synonymous_variant 0.21
fgd1 491259 c.477T>C synonymous_variant 0.38
fgd1 491283 p.Asp167Glu missense_variant 0.42
fgd1 491286 c.504G>C synonymous_variant 0.4
fgd1 491292 c.510G>C synonymous_variant 0.42
fgd1 491295 c.513C>G synonymous_variant 0.42
fgd1 491301 c.519C>T synonymous_variant 0.48
fgd1 491307 c.525C>G synonymous_variant 0.48
fgd1 491316 c.534C>G synonymous_variant 0.46
fgd1 491340 c.558C>G synonymous_variant 0.3
fgd1 491343 c.561C>G synonymous_variant 0.3
fgd1 491355 c.573C>T synonymous_variant 0.23
fgd1 491364 c.582T>C synonymous_variant 0.21
fgd1 491367 c.585G>C synonymous_variant 0.17
fgd1 491382 c.600G>A synonymous_variant 0.17
fgd1 491509 c.727T>C synonymous_variant 0.15
fgd1 491526 c.744T>C synonymous_variant 0.2
fgd1 491539 c.757_759delTCGinsAGC synonymous_variant 0.18
fgd1 491542 c.760T>C synonymous_variant 0.19
fgd1 491547 c.765A>C synonymous_variant 0.18
fgd1 491563 c.781_782delAGinsTC synonymous_variant 0.23
fgd1 491742 c.960T>C synonymous_variant 0.96
mshA 575689 c.342G>C synonymous_variant 0.27
mshA 575704 c.357T>C synonymous_variant 0.35
mshA 575705 c.358T>C synonymous_variant 0.33
mshA 575714 p.Tyr123Asn missense_variant 0.45
mshA 575719 c.372C>T synonymous_variant 0.44
mshA 575734 c.387T>G synonymous_variant 0.43
mshA 575737 c.390T>C synonymous_variant 0.42
mshA 575740 c.393G>C synonymous_variant 0.48
mshA 575772 p.Val142Ala missense_variant 0.59
mshA 575785 c.438T>C synonymous_variant 0.55
mshA 575795 p.Ile150Val missense_variant 0.52
mshA 575803 c.456C>T synonymous_variant 0.48
mshA 575821 c.474G>C synonymous_variant 0.35
mshA 575840 c.494dupC frameshift_variant 0.27
mshA 575844 c.498delC frameshift_variant 0.27
mshA 575864 c.517T>C synonymous_variant 0.3
mshA 575884 c.537G>C synonymous_variant 0.19
mshA 575885 c.538C>T synonymous_variant 0.19
mshA 575892 p.Ala182Gly missense_variant 0.19
mshA 575896 c.549G>C synonymous_variant 0.2
mshA 575905 c.558G>C synonymous_variant 0.33
mshA 575907 p.Ala187Val missense_variant 0.67
mshA 575916 p.Asp190Ala missense_variant 0.43
mshA 575920 c.573C>T synonymous_variant 0.38
mshA 575924 p.Gly193Thr missense_variant 0.33
mshA 575944 c.597T>C synonymous_variant 0.27
mshA 575947 c.600G>C synonymous_variant 0.27
mshA 575959 c.612G>A synonymous_variant 0.15
mshA 575984 c.637T>C synonymous_variant 0.14
ccsA 620388 c.498A>G synonymous_variant 0.32
ccsA 620409 c.519C>G synonymous_variant 0.38
ccsA 620412 c.522T>C synonymous_variant 0.38
ccsA 620415 c.525T>C synonymous_variant 0.39
ccsA 620418 c.528G>C synonymous_variant 0.39
ccsA 620431 p.Leu181Ile missense_variant 0.36
ccsA 620436 c.546T>C synonymous_variant 0.39
ccsA 620439 c.549T>G synonymous_variant 0.35
ccsA 620445 c.555A>G synonymous_variant 0.37
ccsA 620463 c.573C>G synonymous_variant 0.2
ccsA 620586 c.696C>G synonymous_variant 0.16
ccsA 620592 c.702C>T synonymous_variant 0.16
ccsA 620601 c.711C>T synonymous_variant 0.21
ccsA 620604 c.714C>G synonymous_variant 0.19
ccsA 620607 c.717T>G synonymous_variant 0.18
ccsA 620619 c.729G>C synonymous_variant 0.19
ccsA 620625 p.Ile245Met missense_variant 1.0
ccsA 620631 c.741T>C synonymous_variant 0.19
ccsA 620634 c.744C>A synonymous_variant 0.19
ccsA 620646 c.756G>A synonymous_variant 0.22
ccsA 620648 p.Glu253Gly missense_variant 0.24
ccsA 620652 c.762C>G synonymous_variant 0.24
rpoB 760130 c.324T>C synonymous_variant 0.15
rpoB 760139 c.333A>G synonymous_variant 0.15
rpoB 760142 c.336C>G synonymous_variant 0.15
rpoB 760148 p.Asp114Glu missense_variant 0.16
rpoB 760155 p.Lys117Arg missense_variant 0.16
rpoB 760172 c.366G>C synonymous_variant 0.21
rpoB 760178 c.372G>C synonymous_variant 0.23
rpoB 760181 c.375T>G synonymous_variant 0.23
rpoB 760184 c.378A>G synonymous_variant 0.23
rpoB 760199 c.393C>G synonymous_variant 0.34
rpoB 760235 c.429T>C synonymous_variant 0.32
rpoB 760283 c.477G>C synonymous_variant 0.19
rpoB 760298 c.492G>C synonymous_variant 0.17
rpoB 760418 c.612G>C synonymous_variant 0.17
rpoB 760424 c.618C>G synonymous_variant 0.18
rpoB 760430 c.624T>C synonymous_variant 0.16
rpoB 760449 p.Thr215Leu missense_variant 0.26
rpoB 760460 c.654G>T synonymous_variant 0.28
rpoB 760463 c.657C>G synonymous_variant 0.29
rpoB 760475 c.669A>G synonymous_variant 0.31
rpoB 760481 c.675G>C synonymous_variant 0.32
rpoB 760484 c.678A>G synonymous_variant 0.34
rpoB 760490 c.684C>T synonymous_variant 0.36
rpoB 760547 c.741G>C synonymous_variant 0.22
rpoB 760563 p.Arg253Met missense_variant 0.24
rpoB 760587 p.Thr261Ala missense_variant 0.24
rpoB 760591 p.Val262Ala missense_variant 0.19
rpoB 760593 p.Gly263Asn missense_variant 0.19
rpoB 760596 p.Thr264Ser missense_variant 0.24
rpoB 760608 c.802C>T synonymous_variant 0.3
rpoB 760611 c.805T>C synonymous_variant 0.31
rpoB 760634 c.828T>G synonymous_variant 0.4
rpoB 760649 c.843G>C synonymous_variant 0.39
rpoB 760655 c.849A>G synonymous_variant 0.38
rpoB 760661 c.855A>C synonymous_variant 0.38
rpoB 760670 c.864G>C synonymous_variant 0.37
rpoB 760674 c.868T>C synonymous_variant 0.39
rpoB 760679 c.873A>G synonymous_variant 0.39
rpoB 760683 c.877T>C synonymous_variant 0.37
rpoB 760697 p.Glu297Asp missense_variant 0.36
rpoB 760718 c.912C>G synonymous_variant 0.27
rpoB 760721 c.915C>G synonymous_variant 0.26
rpoB 760734 p.Val310Ile missense_variant 0.16
rpoB 760982 c.1176G>C synonymous_variant 0.21
rpoB 761015 c.1209G>C synonymous_variant 0.22
rpoB 761021 c.1215G>C synonymous_variant 0.3
rpoB 761027 c.1221A>G synonymous_variant 0.3
rpoB 761036 c.1230G>C synonymous_variant 0.29
rpoB 761037 c.1231T>C synonymous_variant 0.27
rpoB 761051 c.1245G>C synonymous_variant 0.34
rpoB 761096 c.1290G>C synonymous_variant 0.38
rpoB 761097 c.1291_1292delAGinsTC synonymous_variant 0.37
rpoB 761102 c.1296A>G synonymous_variant 0.37
rpoB 761132 c.1326G>T synonymous_variant 0.37
rpoB 761133 c.1327T>C synonymous_variant 0.37
rpoB 761150 c.1344A>G synonymous_variant 0.33
rpoB 761171 c.1365C>T synonymous_variant 0.28
rpoB 761177 c.1371G>A synonymous_variant 0.26
rpoB 761180 c.1374A>C synonymous_variant 0.28
rpoB 761189 c.1383T>C synonymous_variant 0.32
rpoB 761195 c.1389G>C synonymous_variant 0.33
rpoB 761201 c.1395G>A synonymous_variant 0.3
rpoB 761204 c.1398C>T synonymous_variant 0.31
rpoB 761207 c.1401C>T synonymous_variant 0.3
rpoB 761222 c.1416G>T synonymous_variant 0.23
rpoB 761249 c.1443A>G synonymous_variant 0.27
rpoB 761255 c.1449T>G synonymous_variant 0.27
rpoB 761258 c.1452G>A synonymous_variant 0.25
rpoB 761261 c.1455G>C synonymous_variant 0.27
rpoB 761264 c.1458C>G synonymous_variant 0.25
rpoB 761282 c.1476C>G synonymous_variant 0.31
rpoB 761318 c.1512G>C synonymous_variant 0.44
rpoB 761327 c.1521A>G synonymous_variant 0.43
rpoB 761330 c.1524G>C synonymous_variant 0.48
rpoB 761354 c.1548C>T synonymous_variant 0.37
rpoB 761357 c.1551G>C synonymous_variant 0.37
rpoB 761360 c.1554T>C synonymous_variant 0.37
rpoB 761373 p.Val523His missense_variant 0.33
rpoB 761408 c.1602G>C synonymous_variant 0.26
rpoB 761414 c.1608A>G synonymous_variant 0.21
rpoB 761423 c.1617T>C synonymous_variant 0.2
rpoB 761486 c.1680C>T synonymous_variant 0.17
rpoB 761492 c.1686G>C synonymous_variant 0.17
rpoB 761502 p.Pro566Ser missense_variant 0.16
rpoB 761516 c.1710G>C synonymous_variant 0.27
rpoB 761537 c.1731C>G synonymous_variant 0.31
rpoB 761561 c.1755C>G synonymous_variant 0.4
rpoB 761564 c.1758G>C synonymous_variant 0.41
rpoB 761570 c.1764T>C synonymous_variant 0.41
rpoB 761573 c.1767C>G synonymous_variant 0.39
rpoB 761579 c.1773G>C synonymous_variant 0.45
rpoB 761606 c.1800C>G synonymous_variant 0.45
rpoB 761612 c.1806G>C synonymous_variant 0.43
rpoB 761615 c.1809A>C synonymous_variant 0.36
rpoB 761627 c.1821C>T synonymous_variant 0.36
rpoB 761636 c.1830G>T synonymous_variant 0.33
rpoB 761645 c.1839C>G synonymous_variant 0.32
rpoB 761648 c.1842T>C synonymous_variant 0.33
rpoB 761657 c.1851C>G synonymous_variant 0.28
rpoB 761675 c.1869G>C synonymous_variant 0.28
rpoB 761690 c.1884G>C synonymous_variant 0.25
rpoB 761705 c.1899C>T synonymous_variant 0.22
rpoB 761711 c.1905C>G synonymous_variant 0.21
rpoB 761712 p.Val636Ile missense_variant 0.22
rpoB 761723 p.Glu639Asp missense_variant 0.18
rpoB 761724 p.Glu640Lys missense_variant 0.18
rpoB 761728 p.Ser641Thr missense_variant 0.18
rpoB 761732 c.1926C>G synonymous_variant 0.24
rpoB 761747 c.1941G>C synonymous_variant 0.22
rpoB 761758 p.Tyr651Phe missense_variant 0.19
rpoB 761765 c.1959T>G synonymous_variant 0.17
rpoB 761885 c.2079T>C synonymous_variant 0.14
rpoB 761897 c.2091C>G synonymous_variant 0.16
rpoB 761903 c.2097T>C synonymous_variant 0.18
rpoB 761906 c.2100C>G synonymous_variant 0.19
rpoB 761909 c.2103T>C synonymous_variant 0.23
rpoB 761912 c.2106T>C synonymous_variant 0.25
rpoB 761916 p.Asp704Asn missense_variant 0.31
rpoB 761930 c.2124G>C synonymous_variant 0.36
rpoB 761948 c.2142G>C synonymous_variant 0.43
rpoB 761954 c.2148C>G synonymous_variant 0.44
rpoB 761972 c.2166C>G synonymous_variant 0.41
rpoB 762006 c.2200_2202delCGCinsAGG synonymous_variant 0.42
rpoB 762017 c.2211A>G synonymous_variant 0.44
rpoB 762024 p.Val740Thr missense_variant 0.37
rpoB 762029 c.2223C>G synonymous_variant 0.38
rpoB 762038 c.2232C>T synonymous_variant 0.37
rpoB 762053 c.2247T>C synonymous_variant 0.31
rpoB 762062 c.2256T>C synonymous_variant 0.24
rpoB 762065 c.2259T>C synonymous_variant 0.23
rpoB 762083 c.2277T>C synonymous_variant 0.17
rpoB 762086 c.2280G>C synonymous_variant 0.16
rpoB 762101 c.2295C>G synonymous_variant 0.15
rpoB 762122 c.2316C>T synonymous_variant 0.17
rpoB 762131 c.2325C>G synonymous_variant 0.21
rpoB 762134 c.2328C>A synonymous_variant 0.19
rpoB 762140 c.2334G>C synonymous_variant 0.22
rpoB 762143 c.2337T>C synonymous_variant 0.24
rpoB 762149 c.2343G>C synonymous_variant 0.31
rpoB 762158 c.2352G>C synonymous_variant 0.32
rpoB 762167 c.2361T>C synonymous_variant 0.35
rpoB 762176 c.2370T>C synonymous_variant 0.35
rpoB 762185 c.2379G>C synonymous_variant 0.39
rpoB 762209 c.2403C>T synonymous_variant 0.42
rpoB 762212 c.2406G>C synonymous_variant 0.43
rpoB 762233 c.2427G>C synonymous_variant 0.41
rpoB 762236 c.2430G>C synonymous_variant 0.42
rpoB 762254 c.2448T>C synonymous_variant 0.4
rpoB 762257 c.2451C>G synonymous_variant 0.4
rpoB 762266 c.2460T>G synonymous_variant 0.35
rpoB 762281 c.2475G>A synonymous_variant 0.36
rpoB 762284 c.2478G>C synonymous_variant 0.35
rpoB 762293 c.2487T>C synonymous_variant 0.41
rpoB 762317 c.2511A>G synonymous_variant 0.29
rpoB 762329 c.2523G>C synonymous_variant 0.28
rpoB 762338 c.2532T>C synonymous_variant 0.25
rpoB 762347 c.2541T>C synonymous_variant 0.26
rpoB 762362 p.Glu852Asp missense_variant 0.32
rpoB 762369 c.2563T>C synonymous_variant 0.33
rpoC 762374 c.-996G>C upstream_gene_variant 0.28
rpoC 762380 c.-990T>G upstream_gene_variant 0.22
rpoC 762509 c.-861T>G upstream_gene_variant 0.2
rpoB 762510 p.Ala902Pro missense_variant 0.2
rpoC 762527 c.-843G>C upstream_gene_variant 0.21
rpoC 762533 c.-837T>C upstream_gene_variant 0.21
rpoC 762536 c.-834T>C upstream_gene_variant 0.21
rpoC 762551 c.-819C>T upstream_gene_variant 0.18
rpoC 762575 c.-795C>T upstream_gene_variant 0.14
rpoC 762812 c.-558C>G upstream_gene_variant 0.22
rpoC 762818 c.-552C>G upstream_gene_variant 0.22
rpoC 762827 c.-543G>C upstream_gene_variant 0.18
rpoC 762831 c.-539_-538delAGinsTC upstream_gene_variant 0.18
rpoC 762836 c.-534C>T upstream_gene_variant 0.2
rpoC 762857 c.-513C>G upstream_gene_variant 0.21
rpoC 762860 c.-510G>C upstream_gene_variant 0.21
rpoC 762863 c.-507T>C upstream_gene_variant 0.23
rpoC 762929 c.-441G>C upstream_gene_variant 0.47
rpoC 762995 c.-375G>T upstream_gene_variant 0.57
rpoC 763031 c.-339T>G upstream_gene_variant 1.0
rpoC 763040 c.-330C>G upstream_gene_variant 0.46
rpoC 763050 c.-320C>T upstream_gene_variant 0.42
rpoC 763053 c.-317T>C upstream_gene_variant 0.41
rpoC 763058 c.-312C>G upstream_gene_variant 0.35
rpoC 763070 c.-300T>C upstream_gene_variant 0.36
rpoC 763076 c.-294C>G upstream_gene_variant 0.34
rpoC 763094 c.-276G>C upstream_gene_variant 0.39
rpoC 763115 c.-255T>C upstream_gene_variant 0.38
rpoC 763127 c.-243G>C upstream_gene_variant 0.37
rpoC 763136 c.-234C>T upstream_gene_variant 0.38
rpoC 763142 c.-228C>G upstream_gene_variant 0.37
rpoC 763166 c.-204A>G upstream_gene_variant 0.36
rpoC 763169 c.-201A>G upstream_gene_variant 0.33
rpoC 763202 c.-168A>G upstream_gene_variant 0.27
rpoB 763203 p.Ser1133Ala missense_variant 0.26
rpoB 763207 p.Ser1134Lys missense_variant 0.26
rpoC 763214 c.-156T>C upstream_gene_variant 0.28
rpoC 763227 c.-143C>T upstream_gene_variant 0.26
rpoC 763238 c.-132T>C upstream_gene_variant 0.22
rpoC 763262 c.-108C>A upstream_gene_variant 0.21
rpoC 763265 c.-105G>C upstream_gene_variant 0.18
rpoC 763396 c.27A>G synonymous_variant 0.24
rpoC 763408 c.39T>C synonymous_variant 0.28
rpoC 763411 c.42T>G synonymous_variant 0.28
rpoC 763414 c.45T>G synonymous_variant 0.29
rpoC 763430 c.61A>C synonymous_variant 0.35
rpoC 763444 c.75T>C synonymous_variant 0.39
rpoC 763447 c.78C>T synonymous_variant 0.39
rpoC 763456 c.87A>G synonymous_variant 0.37
rpoC 763465 c.96G>A synonymous_variant 0.4
rpoC 763486 c.117T>C synonymous_variant 0.4
rpoC 763492 c.123G>C synonymous_variant 0.43
rpoC 763528 c.159G>A synonymous_variant 0.48
rpoC 763546 c.177A>G synonymous_variant 0.4
rpoC 763570 c.201G>C synonymous_variant 0.45
rpoC 763594 c.225C>T synonymous_variant 0.42
rpoC 763603 c.234C>T synonymous_variant 0.43
rpoC 763657 c.288G>A synonymous_variant 0.45
rpoC 763660 c.291T>G synonymous_variant 0.46
rpoC 763666 c.297G>T synonymous_variant 0.48
rpoC 763669 c.300C>G synonymous_variant 0.49
rpoC 763702 c.333C>G synonymous_variant 0.56
rpoC 763705 c.336G>C synonymous_variant 0.53
rpoC 763709 c.340C>T synonymous_variant 0.55
rpoC 763714 c.345G>C synonymous_variant 0.46
rpoC 763717 c.348T>C synonymous_variant 0.44
rpoC 763723 c.354G>C synonymous_variant 0.46
rpoC 763732 c.363C>G synonymous_variant 0.44
rpoC 763735 c.366G>C synonymous_variant 0.45
rpoC 763744 c.375G>C synonymous_variant 0.39
rpoC 763888 c.519G>C synonymous_variant 0.14
rpoC 763891 c.522G>C synonymous_variant 0.18
rpoC 763894 c.525A>G synonymous_variant 0.21
rpoC 763936 c.567C>G synonymous_variant 0.29
rpoC 763939 c.570G>A synonymous_variant 0.29
rpoC 763947 p.Ala193Val missense_variant 0.28
rpoC 763960 c.591T>C synonymous_variant 0.31
rpoC 763966 c.597C>T synonymous_variant 0.25
rpoC 763991 p.Ile208Leu missense_variant 0.23
rpoC 763996 c.627T>C synonymous_variant 0.22
rpoC 764002 c.633C>G synonymous_variant 0.21
rpoC 764005 c.636G>C synonymous_variant 0.21
rpoC 764101 c.732C>G synonymous_variant 0.19
rpoC 764110 c.741C>G synonymous_variant 0.24
rpoC 764134 c.765C>G synonymous_variant 0.22
rpoC 764140 c.771C>T synonymous_variant 0.22
rpoC 764152 c.783C>T synonymous_variant 0.26
rpoC 764169 p.Asn267Thr missense_variant 0.26
rpoC 764188 c.819A>G synonymous_variant 0.28
rpoC 764203 c.834G>C synonymous_variant 0.19
rpoC 764206 c.837T>C synonymous_variant 0.18
rpoC 764207 p.Val280Thr missense_variant 0.19
rpoC 764213 p.Arg282Lys missense_variant 0.18
rpoC 764254 c.885G>C synonymous_variant 0.32
rpoC 764257 c.888G>C synonymous_variant 0.33
rpoC 764266 c.897T>G synonymous_variant 0.35
rpoC 764272 c.903G>C synonymous_variant 0.33
rpoC 764278 c.909A>G synonymous_variant 0.32
rpoC 764279 p.Gln304Met missense_variant 0.32
rpoC 764284 c.915G>C synonymous_variant 0.32
rpoC 764293 c.924G>C synonymous_variant 0.32
rpoC 764317 c.948C>G synonymous_variant 0.38
rpoC 764320 c.951C>G synonymous_variant 0.4
rpoC 764365 c.996C>T synonymous_variant 0.29
rpoC 764387 c.1018_1020delTTGinsCTC synonymous_variant 0.21
rpoC 764405 c.1036A>C synonymous_variant 0.23
rpoC 764410 c.1041G>C synonymous_variant 0.17
rpoC 764503 c.1134G>C synonymous_variant 0.3
rpoC 764521 c.1152T>C synonymous_variant 0.36
rpoC 764527 c.1158C>T synonymous_variant 0.35
rpoC 764539 c.1170C>G synonymous_variant 0.52
rpoC 764548 c.1179G>C synonymous_variant 0.55
rpoC 764566 c.1197C>G synonymous_variant 0.51
rpoC 764575 c.1206T>G synonymous_variant 0.5
rpoC 764650 c.1281G>T synonymous_variant 0.38
rpoC 764668 c.1299C>T synonymous_variant 0.4
rpoC 764713 c.1344G>A synonymous_variant 0.42
rpoC 764716 c.1347G>C synonymous_variant 0.42
rpoC 764746 c.1377G>A synonymous_variant 0.46
rpoC 764752 c.1383G>C synonymous_variant 0.47
rpoC 764758 c.1389C>G synonymous_variant 0.47
rpoC 764764 c.1395T>C synonymous_variant 0.48
rpoC 764791 c.1422C>G synonymous_variant 0.48
rpoC 764803 c.1434C>G synonymous_variant 0.43
rpoC 764806 c.1437G>A synonymous_variant 0.43
rpoC 764812 c.1443C>G synonymous_variant 0.46
rpoC 764815 c.1446A>G synonymous_variant 0.45
rpoC 764824 c.1455T>C synonymous_variant 0.48
rpoC 764827 c.1458G>C synonymous_variant 0.47
rpoC 764858 c.1489T>C synonymous_variant 0.42
rpoC 764863 c.1494G>C synonymous_variant 0.43
rpoC 764869 c.1500C>G synonymous_variant 0.47
rpoC 764878 c.1509C>G synonymous_variant 0.52
rpoC 764887 c.1518G>C synonymous_variant 0.41
rpoC 764888 c.1519T>C synonymous_variant 0.4
rpoC 764911 c.1542A>G synonymous_variant 0.32
rpoC 764912 p.Met515Gln missense_variant 0.31
rpoC 764923 c.1554A>G synonymous_variant 0.3
rpoC 764948 c.1579T>C synonymous_variant 0.34
rpoC 764962 c.1593G>C synonymous_variant 0.32
rpoC 764968 c.1599T>C synonymous_variant 0.33
rpoC 764995 c.1626C>G synonymous_variant 0.31
rpoC 765007 c.1638T>G synonymous_variant 0.36
rpoC 765008 c.1639T>C synonymous_variant 0.37
rpoC 765019 c.1650A>G synonymous_variant 0.42
rpoC 765034 c.1665T>C synonymous_variant 0.4
rpoC 765040 c.1671T>C synonymous_variant 0.33
rpoC 765041 c.1672T>C synonymous_variant 0.33
rpoC 765047 c.1678T>C synonymous_variant 0.37
rpoC 765076 c.1707A>C synonymous_variant 0.21
rpoC 765079 c.1710T>G synonymous_variant 0.22
rpoC 765082 c.1713G>T synonymous_variant 0.23
rpoC 765085 c.1716T>C synonymous_variant 0.23
rpoC 765089 c.1720T>C synonymous_variant 0.23
rpoC 765103 c.1734G>A synonymous_variant 0.19
rpoC 765121 c.1752G>C synonymous_variant 0.16
rpoC 765311 p.Ala648Thr missense_variant 0.15
rpoC 765319 c.1950A>G synonymous_variant 0.17
rpoC 765326 p.His653Glu missense_variant 0.18
rpoC 765330 p.Ser654Asn missense_variant 0.19
rpoC 765339 p.Gln657Arg missense_variant 0.26
rpoC 765349 c.1980T>C synonymous_variant 0.33
rpoC 765352 c.1983G>C synonymous_variant 0.38
rpoC 765404 p.Leu679Thr missense_variant 0.31
rpoC 765409 c.2040T>G synonymous_variant 0.37
rpoC 765421 c.2052C>G synonymous_variant 0.38
rpoC 765445 c.2076G>T synonymous_variant 0.42
rpoC 765453 p.Ala695Val missense_variant 0.38
rpoC 765478 c.2109T>C synonymous_variant 0.36
rpoC 765508 c.2139C>G synonymous_variant 0.45
rpoC 765547 c.2178C>T synonymous_variant 0.4
rpoC 765548 c.2179_2180delAGinsTC synonymous_variant 0.42
rpoC 765553 c.2184C>G synonymous_variant 0.44
rpoC 765556 c.2187G>C synonymous_variant 0.46
rpoC 765562 c.2193G>C synonymous_variant 0.49
rpoC 765577 c.2208G>A synonymous_variant 0.54
rpoC 765592 c.2223C>T synonymous_variant 0.52
rpoC 765607 c.2238C>G synonymous_variant 0.49
rpoC 765611 p.His748Ser missense_variant 0.47
rpoC 765628 c.2259G>C synonymous_variant 0.49
rpoC 765658 c.2289C>T synonymous_variant 0.43
rpoC 765662 c.2293_2295delTTGinsCTC synonymous_variant 0.41
rpoC 765673 p.Asp768Glu missense_variant 0.39
rpoC 765700 c.2331T>C synonymous_variant 0.41
rpoC 765718 p.Asp783Glu missense_variant 0.38
rpoC 765724 c.2355C>G synonymous_variant 0.38
rpoC 765728 p.Gln787Asn missense_variant 0.34
rpoC 765734 c.2365T>C synonymous_variant 0.38
rpoC 765739 c.2370G>T synonymous_variant 0.36
rpoC 765742 p.Glu791Asp missense_variant 0.34
rpoC 765787 c.2418C>T synonymous_variant 0.26
rpoC 765793 c.2424C>G synonymous_variant 0.2
rpoC 765796 c.2427C>T synonymous_variant 0.21
rpoC 765811 c.2442T>C synonymous_variant 0.21
rpoC 765814 c.2445A>G synonymous_variant 0.21
rpoC 765826 c.2457T>C synonymous_variant 0.23
rpoC 765850 c.2481G>C synonymous_variant 0.33
rpoC 765871 c.2502T>G synonymous_variant 0.38
rpoC 765875 p.Val836Ile missense_variant 0.39
rpoC 765899 c.2530C>T synonymous_variant 0.39
rpoC 765904 c.2535C>G synonymous_variant 0.42
rpoC 765967 c.2598C>T synonymous_variant 0.31
rpoC 765979 c.2610C>G synonymous_variant 0.29
rpoC 765982 c.2613C>T synonymous_variant 0.24
rpoC 765991 c.2622C>A synonymous_variant 0.26
rpoC 765994 c.2625A>T synonymous_variant 0.27
rpoC 766009 c.2640G>C synonymous_variant 0.2
rpoC 766012 c.2643C>G synonymous_variant 0.21
rpoC 766043 p.Gln892Asp missense_variant 0.14
rpoC 766270 c.2901G>C synonymous_variant 0.25
rpoC 766280 p.Ser971Gly missense_variant 0.33
rpoC 766294 c.2925C>T synonymous_variant 0.39
rpoC 766297 c.2928G>C synonymous_variant 0.4
rpoC 766309 c.2940G>C synonymous_variant 0.47
rpoC 766312 c.2943T>G synonymous_variant 0.48
rpoC 766315 c.2946C>G synonymous_variant 0.47
rpoC 766345 c.2976T>C synonymous_variant 0.62
rpoC 766348 c.2979A>G synonymous_variant 0.61
rpoC 766363 c.2994G>C synonymous_variant 0.61
rpoC 766366 c.2997C>G synonymous_variant 0.61
rpoC 766375 c.3006C>G synonymous_variant 0.62
rpoC 766381 c.3012C>T synonymous_variant 0.62
rpoC 766390 c.3021C>T synonymous_variant 0.55
rpoC 766426 c.3057C>T synonymous_variant 0.62
rpoC 766453 c.3084G>T synonymous_variant 0.47
rpoC 766456 c.3087C>G synonymous_variant 0.45
rpoC 766469 c.3100C>T synonymous_variant 0.47
rpoC 766480 c.3111C>G synonymous_variant 0.39
rpoC 766483 c.3114G>C synonymous_variant 0.37
rpoC 766484 p.Val1039Ile missense_variant 0.38
rpoC 766517 p.Thr1050Ala missense_variant 0.44
rpoC 766528 c.3159T>G synonymous_variant 0.31
rpoC 766530 p.Arg1054Gln missense_variant 0.3
rpoC 766537 c.3168G>A synonymous_variant 0.29
rpoC 766540 p.Asp1057Glu missense_variant 0.29
rpoC 766547 p.Arg1060Lys missense_variant 0.32
rpoC 766564 c.3195C>G synonymous_variant 0.34
rpoC 766570 c.3201T>G synonymous_variant 0.36
rpoC 766573 c.3204T>G synonymous_variant 0.38
rpoC 766582 c.3213C>T synonymous_variant 0.44
rpoC 766585 c.3216T>C synonymous_variant 0.46
rpoC 766607 p.Ile1080Leu missense_variant 0.45
rpoC 766610 p.Ser1081Pro missense_variant 0.45
rpoC 766618 c.3249G>T synonymous_variant 0.52
rpoC 766645 c.3276A>G synonymous_variant 0.47
rpoC 766651 c.3282T>C synonymous_variant 0.45
rpoC 766654 c.3285C>G synonymous_variant 0.43
rpoC 766657 c.3288A>G synonymous_variant 0.45
rpoC 766661 p.Val1098Leu missense_variant 0.47
rpoC 766669 c.3300C>G synonymous_variant 0.46
rpoC 766672 c.3303T>C synonymous_variant 0.46
rpoC 766690 c.3321G>C synonymous_variant 0.44
rpoC 766702 c.3333G>C synonymous_variant 0.41
rpoC 766708 c.3339A>G synonymous_variant 0.47
rpoC 766720 c.3351C>T synonymous_variant 0.37
rpoC 766726 c.3357T>C synonymous_variant 0.41
rpoC 766732 c.3363G>A synonymous_variant 0.38
rpoC 766738 c.3369G>C synonymous_variant 0.41
rpoC 766765 c.3396A>C synonymous_variant 0.46
rpoC 766774 c.3405T>C synonymous_variant 0.42
rpoC 766775 p.Arg1136Asn missense_variant 0.39
rpoC 766787 p.Glu1140Gln missense_variant 0.38
rpoC 766798 c.3429C>G synonymous_variant 0.39
rpoC 766804 c.3435A>G synonymous_variant 0.38
rpoC 766843 c.3474T>C synonymous_variant 0.15
rpoC 766978 c.3609C>T synonymous_variant 0.3
rpoC 766996 c.3627C>T synonymous_variant 0.37
rpoC 767002 c.3633G>C synonymous_variant 0.41
rpoC 767033 c.3664_3666delTCGinsAGC synonymous_variant 0.29
rpoC 767059 c.3690T>C synonymous_variant 0.39
rpoC 767098 c.3729T>C synonymous_variant 0.28
rpoC 767104 c.3735C>G synonymous_variant 0.25
rpoC 767105 p.Asn1246Gln missense_variant 0.28
rpoC 767110 c.3741T>C synonymous_variant 0.3
rpoC 767113 c.3744G>C synonymous_variant 0.3
rpoC 767119 c.3750A>G synonymous_variant 0.29
rpoC 767152 c.3783T>C synonymous_variant 0.29
rpoC 767158 c.3789T>C synonymous_variant 0.26
rpoC 767167 c.3798C>G synonymous_variant 0.26
rpoC 767191 c.3822C>G synonymous_variant 0.21
rpoC 767206 c.3837C>G synonymous_variant 0.26
rpoC 767209 c.3840T>C synonymous_variant 0.27
rpoC 767221 c.3852C>G synonymous_variant 0.26
rpoC 767230 c.3861G>C synonymous_variant 0.3
rpoC 767233 c.3864T>C synonymous_variant 0.29
rpoC 767263 c.3894T>C synonymous_variant 0.25
rpoC 767278 c.3909T>C synonymous_variant 0.23
rpoC 767281 c.3912C>G synonymous_variant 0.23
rpoC 767284 c.3915C>G synonymous_variant 0.22
mmpL5 775639 p.Ile948Val missense_variant 1.0
mmpL5 775850 c.2631C>T synonymous_variant 0.21
mmpL5 775856 c.2625T>C synonymous_variant 0.22
mmpL5 775862 c.2619G>C synonymous_variant 0.18
mmpL5 775865 c.2616T>C synonymous_variant 0.2
mmpL5 775885 p.Ile866Leu missense_variant 0.35
mmpL5 775892 p.His863Gln missense_variant 0.15
mmpL5 775904 c.2577G>A synonymous_variant 0.16
mmpL5 775909 p.Leu858Ile missense_variant 0.2
mmpL5 775913 p.Ala856Ser missense_variant 0.19
mmpL5 775916 c.2565T>C synonymous_variant 0.21
mmpL5 775939 p.Ala848Ser missense_variant 0.25
mmpL5 775940 c.2541C>A synonymous_variant 0.13
mmpL5 775943 c.2538C>G synonymous_variant 0.17
mmpL5 776100 p.Thr794Ile missense_variant 1.0
mmpL5 776182 p.Asp767Asn missense_variant 0.97
mmpS5 779615 c.-710C>G upstream_gene_variant 0.89
rpsL 781395 c.-165T>C upstream_gene_variant 1.0
rpsL 781595 c.36T>C synonymous_variant 0.19
rpsL 781598 c.39G>C synonymous_variant 0.21
rpsL 781608 p.Ser17Gly missense_variant 0.26
rpsL 781628 c.69T>C synonymous_variant 0.39
rpsL 781631 c.72G>C synonymous_variant 0.44
rpsL 781655 c.96T>C synonymous_variant 0.44
rpsL 781658 c.99A>G synonymous_variant 0.46
rpsL 781682 c.123T>C synonymous_variant 0.45
rpsL 781709 c.150G>C synonymous_variant 0.47
rpsL 781715 c.156T>G synonymous_variant 0.44
rpsL 781724 c.165G>C synonymous_variant 0.34
rpsL 781728 c.169T>C synonymous_variant 0.33
rpsL 781733 c.174G>C synonymous_variant 0.29
rpsL 781736 c.177T>C synonymous_variant 0.24
rpsL 781742 c.183C>G synonymous_variant 0.23
rpsL 781748 c.189C>G synonymous_variant 0.23
rpsL 781751 c.192G>C synonymous_variant 0.24
rpsL 781754 c.195G>C synonymous_variant 0.23
rpsL 781760 c.201T>C synonymous_variant 0.21
rpsL 781763 c.204C>G synonymous_variant 0.27
rpsL 781772 c.213C>G synonymous_variant 0.36
rpsL 781800 c.241C>T synonymous_variant 0.42
rpsL 781808 c.249C>T synonymous_variant 0.41
rpsL 781811 c.252C>T synonymous_variant 0.37
rpsL 781832 c.273T>G synonymous_variant 0.45
rpsL 781859 c.300T>C synonymous_variant 0.49
rpsL 781868 c.309T>C synonymous_variant 0.41
rpsL 781871 c.312G>C synonymous_variant 0.4
rpsL 781877 c.318T>G synonymous_variant 0.35
rpsL 781884 p.Asn109Gly missense_variant 0.31
rpsL 781889 c.330C>T synonymous_variant 0.3
rpsL 781892 c.333A>G synonymous_variant 0.3
rpsL 781898 c.339A>C synonymous_variant 0.32
rpsL 781916 c.357T>C synonymous_variant 0.3
rpsL 781929 p.Gly124Ser missense_variant 0.24
rplC 800612 c.-197A>G upstream_gene_variant 0.4
rplC 800618 c.-191T>C upstream_gene_variant 0.39
rplC 800645 c.-164C>G upstream_gene_variant 0.5
rplC 800648 c.-161A>C upstream_gene_variant 0.52
rplC 800654 c.-155T>C upstream_gene_variant 0.51
rplC 800693 c.-116A>C upstream_gene_variant 0.52
rplC 800699 c.-110G>A upstream_gene_variant 0.49
rplC 800700 c.-109C>A upstream_gene_variant 0.48
rplC 800703 c.-106T>C upstream_gene_variant 0.49
rplC 800715 c.-94A>C upstream_gene_variant 0.48
rplC 800744 c.-65G>T upstream_gene_variant 0.25
rplC 800747 c.-62C>G upstream_gene_variant 0.2
rplC 800759 c.-50C>T upstream_gene_variant 0.16
rplC 800867 p.Ser20Asn missense_variant 0.17
rplC 800873 p.Arg22Lys missense_variant 0.18
rplC 800877 c.69A>C synonymous_variant 0.19
rplC 800880 c.72A>G synonymous_variant 0.18
rplC 800886 c.78G>C synonymous_variant 0.2
rplC 800889 c.81C>G synonymous_variant 0.21
rplC 800892 c.84G>C synonymous_variant 0.23
rplC 800916 c.108A>G synonymous_variant 0.34
rplC 800928 c.120C>T synonymous_variant 0.35
rplC 800931 c.123G>C synonymous_variant 0.29
rplC 800937 c.129A>G synonymous_variant 0.3
rplC 800946 c.138T>C synonymous_variant 0.3
rplC 800950 c.142_143delAGinsTC synonymous_variant 0.31
rplC 800964 c.156G>C synonymous_variant 0.35
rplC 800967 c.159C>T synonymous_variant 0.34
rplC 800970 c.162T>C synonymous_variant 0.34
rplC 800985 c.177A>T synonymous_variant 0.39
rplC 801009 c.201A>C synonymous_variant 0.3
rplC 801019 p.Thr71Ala missense_variant 0.23
rplC 801030 c.222C>G synonymous_variant 0.22
rplC 801039 c.231A>G synonymous_variant 0.19
rplC 801132 c.324T>C synonymous_variant 0.15
rplC 801136 p.Ser110Ala missense_variant 0.16
rplC 801147 c.339T>C synonymous_variant 0.21
rplC 801153 c.345G>C synonymous_variant 0.22
rplC 801156 c.348T>C synonymous_variant 0.24
rplC 801171 c.363A>G synonymous_variant 0.23
rplC 801174 c.366T>C synonymous_variant 0.23
rplC 801176 p.Phe123Tyr missense_variant 0.22
rplC 801210 c.402T>C synonymous_variant 0.29
rplC 801220 p.Ser138Gly missense_variant 0.35
rplC 801228 c.420T>C synonymous_variant 0.32
rplC 801237 c.429G>A synonymous_variant 0.35
rplC 801249 c.441T>G synonymous_variant 0.33
rplC 801255 c.447C>T synonymous_variant 0.32
rplC 801258 c.450C>G synonymous_variant 0.31
rplC 801267 c.459A>T synonymous_variant 0.29
rplC 801270 c.462T>C synonymous_variant 0.33
rplC 801271 p.Ala155Ser missense_variant 0.33
rplC 801276 c.468G>C synonymous_variant 0.37
rplC 801281 p.Ala158Gly missense_variant 0.38
rplC 801307 p.Ala167Ser missense_variant 0.25
fbiC 1303488 c.558G>C synonymous_variant 0.15
fbiC 1303492 c.562T>C synonymous_variant 0.16
fbiC 1303509 c.579G>C synonymous_variant 0.21
fbiC 1303512 c.582T>G synonymous_variant 0.21
fbiC 1303545 c.615A>G synonymous_variant 0.22
fbiC 1303581 c.651G>C synonymous_variant 0.26
fbiC 1303583 p.Thr218Ser missense_variant 0.25
fbiC 1303588 c.658_660delCGAinsAGG synonymous_variant 0.26
fbiC 1303602 c.672A>G synonymous_variant 0.25
fbiC 1303614 c.684C>G synonymous_variant 0.25
fbiC 1303617 c.687C>G synonymous_variant 0.26
fbiC 1303620 c.690C>T synonymous_variant 0.25
fbiC 1303632 c.702T>G synonymous_variant 0.21
fbiC 1303638 c.708A>G synonymous_variant 0.22
fbiC 1305348 c.2418C>T synonymous_variant 0.21
fbiC 1305360 c.2430G>C synonymous_variant 0.27
fbiC 1305361 c.2431C>T synonymous_variant 0.27
fbiC 1305381 c.2451G>C synonymous_variant 0.24
fbiC 1305393 c.2463T>C synonymous_variant 0.22
fbiC 1305405 c.2475A>G synonymous_variant 0.21
fbiC 1305418 p.Val830Ile missense_variant 0.22
fbiC 1305423 c.2493T>C synonymous_variant 0.21
fbiC 1305427 c.2497C>T synonymous_variant 0.22
fbiC 1305434 p.Ala835Gly missense_variant 0.14
Rv1258c 1406760 c.580_581insC frameshift_variant 1.0
atpE 1461097 p.Ala18Gly missense_variant 0.15
atpE 1461132 p.Val30Ile missense_variant 0.18
atpE 1461147 c.103_105delCTTinsTTG synonymous_variant 0.17
atpE 1461153 p.Ser37Ala missense_variant 0.17
atpE 1461159 p.Val39Ile missense_variant 0.16
atpE 1461164 c.120C>T synonymous_variant 0.16
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1471923 n.78T>C non_coding_transcript_exon_variant 0.41
rrs 1471925 n.80T>C non_coding_transcript_exon_variant 0.42
rrs 1471932 n.87A>G non_coding_transcript_exon_variant 0.39
rrs 1471934 n.89A>G non_coding_transcript_exon_variant 0.4
rrs 1471936 n.91A>G non_coding_transcript_exon_variant 0.43
rrs 1471985 n.140T>C non_coding_transcript_exon_variant 0.55
rrs 1471986 n.141C>T non_coding_transcript_exon_variant 0.54
rrs 1471996 n.151C>T non_coding_transcript_exon_variant 0.57
rrs 1472029 n.184C>T non_coding_transcript_exon_variant 0.61
rrs 1472041 n.196C>T non_coding_transcript_exon_variant 0.56
rrs 1472042 n.197T>C non_coding_transcript_exon_variant 0.56
rrs 1472053 n.211_212delGC non_coding_transcript_exon_variant 0.56
rrs 1472061 n.216A>T non_coding_transcript_exon_variant 0.58
rrs 1472075 n.230A>G non_coding_transcript_exon_variant 0.57
rrs 1472108 n.263C>T non_coding_transcript_exon_variant 0.56
rrs 1472438 n.593T>C non_coding_transcript_exon_variant 0.59
rrs 1472446 n.601T>A non_coding_transcript_exon_variant 0.6
rrs 1472452 n.607G>A non_coding_transcript_exon_variant 0.63
rrs 1472464 n.619A>G non_coding_transcript_exon_variant 0.62
rrs 1472489 n.644A>G non_coding_transcript_exon_variant 0.63
rrs 1472498 n.653C>T non_coding_transcript_exon_variant 0.65
rrs 1472683 n.838_839insTA non_coding_transcript_exon_variant 0.61
rrs 1472847 n.1002G>C non_coding_transcript_exon_variant 0.4
rrs 1472848 n.1003T>G non_coding_transcript_exon_variant 0.39
rrs 1472849 n.1004C>G non_coding_transcript_exon_variant 0.39
rrs 1472858 n.1013G>T non_coding_transcript_exon_variant 0.39
rrs 1472859 n.1014G>C non_coding_transcript_exon_variant 0.39
rrs 1472860 n.1015C>G non_coding_transcript_exon_variant 0.39
rrs 1472973 n.1128A>T non_coding_transcript_exon_variant 0.57
rrs 1473104 n.1259C>T non_coding_transcript_exon_variant 0.53
rrs 1473111 n.1266A>T non_coding_transcript_exon_variant 0.54
rrs 1473123 n.1278A>T non_coding_transcript_exon_variant 0.55
rrs 1473276 n.1431A>G non_coding_transcript_exon_variant 0.63
rrs 1473290 n.1445C>T non_coding_transcript_exon_variant 0.62
rrs 1473301 n.1456T>C non_coding_transcript_exon_variant 0.58
rrl 1473668 n.11C>T non_coding_transcript_exon_variant 0.18
rrl 1473770 n.113T>G non_coding_transcript_exon_variant 0.36
rrl 1473788 n.131A>G non_coding_transcript_exon_variant 0.32
rrl 1473806 n.149C>T non_coding_transcript_exon_variant 0.25
rrl 1473807 n.150T>C non_coding_transcript_exon_variant 0.25
rrl 1473812 n.155G>T non_coding_transcript_exon_variant 0.23
rrl 1473814 n.157A>C non_coding_transcript_exon_variant 0.23
rrl 1473815 n.158T>G non_coding_transcript_exon_variant 0.23
rrl 1473816 n.159C>G non_coding_transcript_exon_variant 0.23
rrl 1473822 n.165A>G non_coding_transcript_exon_variant 0.22
rrl 1473839 n.182G>T non_coding_transcript_exon_variant 0.24
rrl 1474083 n.426C>T non_coding_transcript_exon_variant 0.3
rrl 1474089 n.432C>T non_coding_transcript_exon_variant 0.28
rrl 1474093 n.436G>A non_coding_transcript_exon_variant 0.3
rrl 1474103 n.446A>T non_coding_transcript_exon_variant 0.25
rrl 1474108 n.451C>G non_coding_transcript_exon_variant 0.25
rrl 1474110 n.453A>T non_coding_transcript_exon_variant 0.31
rrl 1474116 n.459G>A non_coding_transcript_exon_variant 0.32
rrl 1474127 n.470G>A non_coding_transcript_exon_variant 0.39
rrl 1474139 n.482C>T non_coding_transcript_exon_variant 0.46
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 0.43
rrl 1474174 n.517A>G non_coding_transcript_exon_variant 0.54
rrl 1474181 n.524C>T non_coding_transcript_exon_variant 0.55
rrl 1474201 n.544T>C non_coding_transcript_exon_variant 0.55
rrl 1474202 n.545T>G non_coding_transcript_exon_variant 0.55
rrl 1474249 n.592G>T non_coding_transcript_exon_variant 0.51
rrl 1474263 n.606G>A non_coding_transcript_exon_variant 0.46
rrl 1474287 n.630_631insTC non_coding_transcript_exon_variant 0.22
rrl 1474292 n.636_646delTCCTCTCCGGA non_coding_transcript_exon_variant 0.21
rrl 1474306 n.649A>G non_coding_transcript_exon_variant 0.24
rrl 1474308 n.651G>T non_coding_transcript_exon_variant 0.24
rrl 1474310 n.653T>G non_coding_transcript_exon_variant 0.24
rrl 1474350 n.693G>C non_coding_transcript_exon_variant 0.16
rrl 1474353 n.696A>G non_coding_transcript_exon_variant 0.16
rrl 1474356 n.699T>C non_coding_transcript_exon_variant 0.16
rrl 1474362 n.705A>G non_coding_transcript_exon_variant 0.16
rrl 1474374 n.717T>G non_coding_transcript_exon_variant 0.15
rrl 1474452 n.795C>G non_coding_transcript_exon_variant 0.3
rrl 1474552 n.895C>T non_coding_transcript_exon_variant 0.59
rrl 1474632 n.975G>T non_coding_transcript_exon_variant 0.52
rrl 1474636 n.979A>T non_coding_transcript_exon_variant 0.51
rrl 1474638 n.981C>A non_coding_transcript_exon_variant 0.51
rrl 1474639 n.982G>C non_coding_transcript_exon_variant 0.51
rrl 1474753 n.1096A>G non_coding_transcript_exon_variant 0.47
rrl 1474760 n.1103A>G non_coding_transcript_exon_variant 0.51
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 0.51
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 0.55
rrl 1474830 n.1173A>G non_coding_transcript_exon_variant 0.59
rrl 1475031 n.1374G>T non_coding_transcript_exon_variant 0.24
rrl 1475037 n.1380T>C non_coding_transcript_exon_variant 0.28
rrl 1475061 n.1404C>T non_coding_transcript_exon_variant 0.38
rrl 1475062 n.1405A>G non_coding_transcript_exon_variant 0.39
rrl 1475120 n.1463G>T non_coding_transcript_exon_variant 0.47
rrl 1475206 n.1549C>T non_coding_transcript_exon_variant 0.25
rrl 1475209 n.1552G>C non_coding_transcript_exon_variant 0.25
rrl 1475213 n.1556C>T non_coding_transcript_exon_variant 0.23
rrl 1475452 n.1795C>A non_coding_transcript_exon_variant 0.37
rrl 1475458 n.1801C>T non_coding_transcript_exon_variant 0.4
rrl 1475460 n.1803A>G non_coding_transcript_exon_variant 0.42
rrl 1475482 n.1825A>G non_coding_transcript_exon_variant 0.51
rrl 1475505 n.1848G>A non_coding_transcript_exon_variant 0.59
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 0.61
rrl 1475544 n.1887A>T non_coding_transcript_exon_variant 0.44
rrl 1475545 n.1888T>G non_coding_transcript_exon_variant 0.44
rrl 1475573 n.1916G>A non_coding_transcript_exon_variant 0.3
rrl 1475659 n.2002G>A non_coding_transcript_exon_variant 0.23
rrl 1475753 n.2096C>G non_coding_transcript_exon_variant 0.49
rrl 1475762 n.2105G>T non_coding_transcript_exon_variant 0.45
rrl 1475763 n.2106C>T non_coding_transcript_exon_variant 0.46
rrl 1475764 n.2107A>C non_coding_transcript_exon_variant 0.47
rrl 1475765 n.2108A>G non_coding_transcript_exon_variant 0.47
rrl 1475775 n.2118G>T non_coding_transcript_exon_variant 0.49
rrl 1475916 n.2259C>T non_coding_transcript_exon_variant 0.47
rrl 1475975 n.2318C>T non_coding_transcript_exon_variant 0.4
rrl 1475977 n.2320A>G non_coding_transcript_exon_variant 0.4
rrl 1475995 n.2338G>A non_coding_transcript_exon_variant 0.4
rrl 1475997 n.2340A>G non_coding_transcript_exon_variant 0.39
rrl 1476033 n.2376T>C non_coding_transcript_exon_variant 0.4
rrl 1476034 n.2377C>G non_coding_transcript_exon_variant 0.4
rrl 1476035 n.2378G>C non_coding_transcript_exon_variant 0.41
rrl 1476044 n.2387T>G non_coding_transcript_exon_variant 0.4
rrl 1476045 n.2388G>T non_coding_transcript_exon_variant 0.4
rrl 1476049 n.2392C>T non_coding_transcript_exon_variant 0.41
rrl 1476086 n.2429G>A non_coding_transcript_exon_variant 0.51
rrl 1476088 n.2431A>C non_coding_transcript_exon_variant 0.54
rrl 1476103 n.2446C>A non_coding_transcript_exon_variant 0.48
rrl 1476108 n.2451T>G non_coding_transcript_exon_variant 0.47
rrl 1476110 n.2453G>T non_coding_transcript_exon_variant 0.48
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 0.49
rrl 1476131 n.2474C>T non_coding_transcript_exon_variant 0.58
rrl 1476214 n.2557G>T non_coding_transcript_exon_variant 0.67
rrl 1476215 n.2558C>T non_coding_transcript_exon_variant 0.67
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.64
rrl 1476245 n.2588C>T non_coding_transcript_exon_variant 0.56
rrl 1476252 n.2595T>G non_coding_transcript_exon_variant 0.57
rrl 1476256 n.2599A>C non_coding_transcript_exon_variant 0.56
rrl 1476262 n.2605G>A non_coding_transcript_exon_variant 0.56
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 0.56
rrl 1476529 n.2872A>T non_coding_transcript_exon_variant 0.54
rrl 1476583 n.2926G>A non_coding_transcript_exon_variant 0.6
rrl 1476584 n.2927C>T non_coding_transcript_exon_variant 0.61
rrl 1476594 n.2937C>T non_coding_transcript_exon_variant 0.61
rrl 1476597 n.2940G>A non_coding_transcript_exon_variant 0.62
rrl 1476603 n.2946G>A non_coding_transcript_exon_variant 0.62
rrl 1476608 n.2951C>G non_coding_transcript_exon_variant 0.63
rrl 1476616 n.2959A>G non_coding_transcript_exon_variant 0.61
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 0.63
rrl 1476664 n.3007T>C non_coding_transcript_exon_variant 0.6
rrl 1476665 n.3008T>G non_coding_transcript_exon_variant 0.51
rrl 1476674 n.3017T>C non_coding_transcript_exon_variant 0.57
rrl 1476679 n.3022T>A non_coding_transcript_exon_variant 0.52
rrl 1476690 n.3033C>T non_coding_transcript_exon_variant 0.42
rrl 1476692 n.3035T>C non_coding_transcript_exon_variant 0.44
rrl 1476693 n.3036G>A non_coding_transcript_exon_variant 0.45
rrl 1476716 n.3059A>C non_coding_transcript_exon_variant 0.36
rrl 1476723 n.3066T>A non_coding_transcript_exon_variant 0.31
rrl 1476726 n.3069A>G non_coding_transcript_exon_variant 0.26
rrl 1476731 n.3074G>A non_coding_transcript_exon_variant 0.24
rrl 1476732 n.3075T>C non_coding_transcript_exon_variant 0.24
inhA 1673490 c.-712A>G upstream_gene_variant 0.26
inhA 1673499 c.-703T>C upstream_gene_variant 0.26
inhA 1673505 c.-697A>C upstream_gene_variant 0.25
inhA 1673514 c.-688G>C upstream_gene_variant 0.24
inhA 1673517 c.-685G>C upstream_gene_variant 0.24
inhA 1673523 c.-679G>A upstream_gene_variant 0.24
inhA 1673524 c.-678C>T upstream_gene_variant 0.24
inhA 1673535 c.-667A>G upstream_gene_variant 0.26
inhA 1673547 c.-655T>C upstream_gene_variant 0.25
inhA 1673568 c.-634C>G upstream_gene_variant 0.23
inhA 1673571 c.-631C>G upstream_gene_variant 0.24
inhA 1673580 c.-622T>C upstream_gene_variant 0.16
inhA 1673583 c.-619A>T upstream_gene_variant 0.17
fabG1 1674083 p.Ala215Asp missense_variant 0.14
fabG1 1674098 p.Val220Ala missense_variant 0.2
inhA 1674114 c.-88T>C upstream_gene_variant 0.19
inhA 1674123 c.-79T>C upstream_gene_variant 0.18
inhA 1674126 c.-76G>C upstream_gene_variant 0.18
fabG1 1674127 p.Ser230Gly missense_variant 0.17
inhA 1674132 c.-70T>C upstream_gene_variant 0.18
fabG1 1674136 p.Ser233Ala missense_variant 0.18
inhA 1674144 c.-58G>C upstream_gene_variant 0.22
inhA 1674150 c.-52C>T upstream_gene_variant 0.2
inhA 1674428 p.Gly76Asp missense_variant 0.14
inhA 1674433 p.Val78Ile missense_variant 0.16
inhA 1674443 p.Ala81Val missense_variant 0.29
inhA 1674452 p.Ala84Glu missense_variant 0.31
inhA 1674471 c.270G>C synonymous_variant 0.47
inhA 1674480 c.279T>C synonymous_variant 0.44
inhA 1674486 c.285T>C synonymous_variant 0.44
inhA 1674514 p.Ile105Val missense_variant 0.42
inhA 1674534 c.333G>C synonymous_variant 0.27
inhA 1674542 p.Ala114Glu missense_variant 0.21
inhA 1674546 c.345T>C synonymous_variant 0.21
inhA 1674549 c.348G>C synonymous_variant 0.21
inhA 1674550 p.Ser117Ala missense_variant 0.22
inhA 1674561 c.360C>T synonymous_variant 0.2
inhA 1674703 c.502T>C synonymous_variant 0.17
inhA 1674756 c.555T>G synonymous_variant 0.14
inhA 1674780 c.579T>G synonymous_variant 0.15
inhA 1674789 c.588G>C synonymous_variant 0.17
inhA 1674801 c.600T>C synonymous_variant 0.28
inhA 1674830 p.Glu210Gly missense_variant 0.31
inhA 1674837 c.636C>T synonymous_variant 0.3
inhA 1674839 p.Ala213Glu missense_variant 0.3
inhA 1674848 p.Gln216Arg missense_variant 0.3
inhA 1674870 c.669T>C synonymous_variant 0.28
inhA 1674883 p.Ile228Val missense_variant 0.21
inhA 1674892 p.Asn231Asp missense_variant 0.21
inhA 1674900 c.699G>A synonymous_variant 0.15
inhA 1674915 c.714C>G synonymous_variant 0.14
inhA 1674924 c.723G>C synonymous_variant 0.15
inhA 1674927 c.726G>C synonymous_variant 0.15
rpsA 1833547 c.6G>A synonymous_variant 0.14
rpsA 1833589 c.48A>C synonymous_variant 0.16
rpsA 1833604 c.63C>T synonymous_variant 0.18
rpsA 1833616 c.75A>C synonymous_variant 0.22
rpsA 1833619 c.78A>C synonymous_variant 0.24
rpsA 1833658 c.117C>G synonymous_variant 0.18
rpsA 1833661 c.120A>G synonymous_variant 0.18
rpsA 1833664 c.123C>G synonymous_variant 0.19
rpsA 1833667 c.126C>G synonymous_variant 0.19
rpsA 1833676 c.135A>G synonymous_variant 0.19
rpsA 1833679 c.138G>T synonymous_variant 0.23
rpsA 1833694 c.153G>C synonymous_variant 0.26
rpsA 1833697 c.156C>G synonymous_variant 0.24
rpsA 1833730 c.189C>T synonymous_variant 0.15
rpsA 1833734 p.Ala65Ser missense_variant 0.15
rpsA 1833742 c.201A>G synonymous_variant 0.2
rpsA 1833770 p.Asn77His missense_variant 0.32
rpsA 1833778 c.237C>G synonymous_variant 0.31
rpsA 1833781 c.240T>G synonymous_variant 0.31
rpsA 1833802 c.261A>G synonymous_variant 0.32
rpsA 1833805 c.264C>T synonymous_variant 0.31
rpsA 1833811 c.270G>C synonymous_variant 0.37
rpsA 1833814 c.273C>G synonymous_variant 0.37
rpsA 1833835 c.294C>T synonymous_variant 0.35
rpsA 1833841 c.300C>G synonymous_variant 0.34
rpsA 1833847 c.306C>G synonymous_variant 0.33
rpsA 1833856 c.315A>G synonymous_variant 0.28
rpsA 1833862 c.321G>C synonymous_variant 0.28
rpsA 1833874 c.333T>C synonymous_variant 0.29
rpsA 1833886 c.345C>G synonymous_variant 0.28
rpsA 1833894 p.Ala118Glu missense_variant 0.25
rpsA 1833928 c.387G>C synonymous_variant 0.3
rpsA 1833949 c.408T>C synonymous_variant 0.32
rpsA 1833979 c.438T>C synonymous_variant 0.35
rpsA 1833988 c.447C>G synonymous_variant 0.32
rpsA 1834000 c.459G>C synonymous_variant 0.34
rpsA 1834015 c.474G>C synonymous_variant 0.41
rpsA 1834040 p.Lys167Arg missense_variant 0.4
rpsA 1834051 c.510G>A synonymous_variant 0.44
rpsA 1834150 c.609G>C synonymous_variant 0.21
rpsA 1834153 c.612T>C synonymous_variant 0.22
rpsA 1834154 p.Asn205Gln missense_variant 0.22
rpsA 1834157 c.616T>C synonymous_variant 0.22
rpsA 1834162 c.621A>G synonymous_variant 0.21
rpsA 1834165 c.624A>G synonymous_variant 0.21
rpsA 1834169 p.Thr210Ala missense_variant 0.22
rpsA 1834172 p.Ile211Val missense_variant 0.21
rpsA 1834177 c.636A>C synonymous_variant 0.97
rpsA 1834186 c.645C>G synonymous_variant 0.31
rpsA 1834222 c.681T>C synonymous_variant 0.21
rpsA 1834225 c.684C>G synonymous_variant 0.18
rpsA 1834231 c.690T>G synonymous_variant 0.2
rpsA 1834240 c.699T>C synonymous_variant 0.27
rpsA 1834249 c.708T>C synonymous_variant 0.3
rpsA 1834261 c.720A>G synonymous_variant 0.3
rpsA 1834264 c.723G>C synonymous_variant 0.31
rpsA 1834297 c.756C>G synonymous_variant 0.4
rpsA 1834303 c.762T>G synonymous_variant 0.41
rpsA 1834306 c.765T>C synonymous_variant 0.42
rpsA 1834361 c.820T>C synonymous_variant 0.42
rpsA 1834366 c.825A>G synonymous_variant 0.44
rpsA 1834375 c.834G>C synonymous_variant 0.4
rpsA 1834378 c.837T>C synonymous_variant 0.36
rpsA 1834423 c.882G>C synonymous_variant 0.38
rpsA 1834451 c.910T>C synonymous_variant 0.44
rpsA 1834456 c.915T>G synonymous_variant 0.46
rpsA 1834468 c.927A>G synonymous_variant 0.45
rpsA 1834489 c.948T>C synonymous_variant 0.5
rpsA 1834522 c.981C>T synonymous_variant 0.39
rpsA 1834527 p.Arg329Gln missense_variant 0.36
rpsA 1834546 c.1005T>C synonymous_variant 0.34
rpsA 1834555 c.1014T>C synonymous_variant 0.27
rpsA 1834558 c.1017C>G synonymous_variant 0.27
rpsA 1834603 p.Glu354Asp missense_variant 0.33
rpsA 1834606 c.1065C>G synonymous_variant 0.32
rpsA 1834609 c.1068T>C synonymous_variant 0.32
rpsA 1834619 c.1078T>C synonymous_variant 0.35
rpsA 1834622 c.1081_1083delTCGinsAGC synonymous_variant 0.36
rpsA 1834633 c.1092A>G synonymous_variant 0.48
rpsA 1834639 c.1098T>C synonymous_variant 0.48
rpsA 1834650 p.Thr370Asn missense_variant 0.53
rpsA 1834666 c.1125G>C synonymous_variant 0.43
rpsA 1834667 p.Ala376Ser missense_variant 0.45
rpsA 1834690 c.1149T>C synonymous_variant 0.37
rpsA 1834720 c.1179C>G synonymous_variant 0.38
rpsA 1834732 c.1191T>C synonymous_variant 0.36
rpsA 1834738 c.1197A>G synonymous_variant 0.31
rpsA 1834747 c.1206A>G synonymous_variant 0.31
rpsA 1834751 p.Leu404Ile missense_variant 0.29
rpsA 1834756 c.1215G>A synonymous_variant 0.33
rpsA 1834759 c.1218A>T synonymous_variant 0.31
rpsA 1834765 p.Glu408Asp missense_variant 0.3
rpsA 1834775 p.Ala412Thr missense_variant 0.33
rpsA 1834780 c.1239A>G synonymous_variant 0.33
rpsA 1834786 c.1245A>G synonymous_variant 0.28
rpsA 1834789 c.1248T>C synonymous_variant 0.28
rpsA 1834792 c.1251G>C synonymous_variant 0.28
tlyA 1917972 c.33A>G synonymous_variant 1.0
katG 2154724 p.Arg463Leu missense_variant 1.0
PPE35 2167926 p.Leu896Ser missense_variant 1.0
PPE35 2169320 p.Leu431Phe missense_variant 0.31
PPE35 2170235 c.378T>C synonymous_variant 1.0
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0
kasA 2517941 c.-174C>G upstream_gene_variant 0.31
kasA 2517962 c.-153C>G upstream_gene_variant 0.31
kasA 2517974 c.-141T>C upstream_gene_variant 0.2
kasA 2517980 c.-135C>G upstream_gene_variant 0.19
kasA 2517989 c.-126T>G upstream_gene_variant 0.16
kasA 2517992 c.-123C>G upstream_gene_variant 0.16
kasA 2517993 c.-122_-121delGCinsAG upstream_gene_variant 0.16
kasA 2518252 c.138C>T synonymous_variant 0.16
kasA 2518261 p.Glu49Asp missense_variant 0.15
kasA 2518283 p.Ala57Pro missense_variant 0.14
kasA 2518504 c.390T>C synonymous_variant 0.14
kasA 2518506 p.Ala131Glu missense_variant 0.17
kasA 2518519 c.405G>C synonymous_variant 0.19
kasA 2518528 c.414C>G synonymous_variant 0.17
kasA 2518532 c.418C>T synonymous_variant 0.18
kasA 2518540 c.426T>G synonymous_variant 0.22
kasA 2518561 c.447T>C synonymous_variant 0.22
kasA 2518567 c.453G>C synonymous_variant 0.23
kasA 2518574 p.Ile154Val missense_variant 0.21
kasA 2518579 c.465T>C synonymous_variant 0.19
kasA 2518586 p.Leu158Val missense_variant 0.15
kasA 2518591 c.477G>C synonymous_variant 0.15
kasA 2518678 c.564C>T synonymous_variant 0.17
kasA 2518688 p.Val192Met missense_variant 0.18
kasA 2518692 p.Ala193Val missense_variant 0.19
kasA 2518696 c.582C>G synonymous_variant 0.2
kasA 2518702 c.588C>T synonymous_variant 0.19
kasA 2518705 c.591T>C synonymous_variant 0.19
kasA 2518714 c.600A>C synonymous_variant 0.18
kasA 2518715 p.Pro201Gly missense_variant 0.19
kasA 2518732 c.618C>G synonymous_variant 0.3
kasA 2518747 c.633C>G synonymous_variant 0.35
kasA 2518756 c.642G>C synonymous_variant 0.36
kasA 2518759 c.645C>G synonymous_variant 0.33
kasA 2518783 c.669T>C synonymous_variant 0.33
kasA 2518787 p.Arg225Lys missense_variant 0.33
kasA 2518792 c.678C>T synonymous_variant 0.34
kasA 2518795 c.681C>A synonymous_variant 0.37
kasA 2518810 c.696G>A synonymous_variant 0.31
kasA 2518813 c.699C>T synonymous_variant 0.33
kasA 2518816 c.702C>T synonymous_variant 0.33
kasA 2518822 c.708C>G synonymous_variant 0.36
kasA 2518825 c.711T>C synonymous_variant 0.36
kasA 2518853 p.Leu247Ile missense_variant 0.29
kasA 2518864 c.750G>C synonymous_variant 0.31
kasA 2518879 c.765A>G synonymous_variant 0.33
kasA 2518898 c.784T>C synonymous_variant 0.24
kasA 2518906 c.792A>G synonymous_variant 0.24
kasA 2518910 p.Leu266Met missense_variant 0.22
kasA 2518915 c.801T>C synonymous_variant 0.25
folC 2746564 p.Ala345Ser missense_variant 0.21
folC 2746567 c.1032C>T synonymous_variant 0.21
folC 2746576 c.1023C>G synonymous_variant 0.22
folC 2746584 c.1015T>C synonymous_variant 0.22
folC 2746588 c.1011C>G synonymous_variant 0.21
folC 2746597 c.1002C>G synonymous_variant 0.24
folC 2746600 p.Val333Ala missense_variant 0.24
folC 2746603 c.996C>G synonymous_variant 0.24
folC 2746609 c.990T>C synonymous_variant 0.24
folC 2746624 p.Ala325Thr missense_variant 0.2
folC 2746631 p.Gly323Ala missense_variant 0.2
Rv2752c 3065061 c.1131C>T synonymous_variant 0.13
Rv2752c 3065880 c.312C>A synonymous_variant 0.17
Rv2752c 3065886 c.306C>G synonymous_variant 0.18
Rv2752c 3065900 p.Pro98Ala missense_variant 0.18
Rv2752c 3065901 c.291A>G synonymous_variant 0.19
Rv2752c 3065907 c.285G>A synonymous_variant 0.2
Rv2752c 3065916 c.276T>C synonymous_variant 0.27
Rv2752c 3065922 c.270T>C synonymous_variant 0.28
Rv2752c 3065925 c.267G>C synonymous_variant 0.28
Rv2752c 3065946 p.Gly82Ala missense_variant 0.3
Rv2752c 3065952 c.240C>G synonymous_variant 0.31
Rv2752c 3065957 c.235T>C synonymous_variant 0.32
Rv2752c 3065972 p.Ile74Val missense_variant 0.19
thyX 3067328 c.618G>C synonymous_variant 0.18
thyX 3067349 c.597G>C synonymous_variant 0.29
thyX 3067355 c.591A>G synonymous_variant 0.32
thyX 3067364 c.582C>T synonymous_variant 0.32
thyX 3067373 c.573C>G synonymous_variant 0.38
thyX 3067379 c.567C>T synonymous_variant 0.4
thyX 3067427 c.519G>C synonymous_variant 0.22
thyX 3067442 c.504C>G synonymous_variant 0.13
thyX 3067451 c.495G>A synonymous_variant 0.14
thyX 3067721 c.225T>C synonymous_variant 0.19
thyX 3067727 c.219A>C synonymous_variant 0.18
thyX 3067742 c.204A>G synonymous_variant 0.21
thyX 3067763 c.183C>G synonymous_variant 0.2
thyX 3067770 p.Gly59Ala missense_variant 0.23
thyX 3067787 p.Lys53Arg missense_variant 0.25
thyX 3067790 c.156C>G synonymous_variant 0.26
thyX 3067814 c.132T>C synonymous_variant 0.27
thyX 3067847 c.99C>G synonymous_variant 0.17
thyX 3067850 c.96A>G synonymous_variant 0.21
thyX 3067869 p.Thr26Ser missense_variant 0.23
thyX 3067874 c.72C>G synonymous_variant 0.18
thyX 3067883 c.63C>G synonymous_variant 0.19
thyX 3067886 c.60A>G synonymous_variant 0.2
thyX 3067889 p.Ala19Pro missense_variant 0.21
thyX 3067892 c.52_54delTTGinsCTC synonymous_variant 0.18
thyX 3067898 p.Asp16Glu missense_variant 0.2
thyX 3067910 c.36C>T synonymous_variant 0.25
thyX 3067934 c.12C>G synonymous_variant 0.22
thyX 3067949 c.-4C>T upstream_gene_variant 0.19
thyA 3073860 c.612C>G synonymous_variant 0.15
thyA 3073863 c.609T>C synonymous_variant 0.15
thyA 3073874 p.Ile200Val missense_variant 0.15
thyA 3073887 p.Ser195Asp missense_variant 0.15
thyA 3073893 c.579C>G synonymous_variant 0.15
thyA 3073925 c.547T>C synonymous_variant 0.22
ald 3086788 c.-32T>C upstream_gene_variant 1.0
fprA 3473996 c.-11_-10insA upstream_gene_variant 1.0
Rv3236c 3612813 p.Thr102Ala missense_variant 1.0
rpoA 3877569 p.Pro313Ala missense_variant 0.24
rpoA 3877587 c.921A>G synonymous_variant 0.27
rpoA 3877593 c.915C>T synonymous_variant 0.26
rpoA 3877611 p.Ile299Val missense_variant 0.26
rpoA 3877617 c.891G>C synonymous_variant 0.27
rpoA 3877638 c.870T>G synonymous_variant 0.41
rpoA 3877656 c.852T>C synonymous_variant 0.44
rpoA 3877668 c.840A>G synonymous_variant 0.34
rpoA 3877674 c.834C>G synonymous_variant 0.33
rpoA 3877677 c.831G>C synonymous_variant 0.33
rpoA 3877680 c.828G>C synonymous_variant 0.35
rpoA 3877686 c.822A>G synonymous_variant 0.33
rpoA 3877689 c.819C>G synonymous_variant 0.33
rpoA 3877692 c.816G>C synonymous_variant 0.33
rpoA 3877695 c.813C>G synonymous_variant 0.36
rpoA 3877704 c.804G>C synonymous_variant 0.38
rpoA 3877707 c.801G>A synonymous_variant 0.4
rpoA 3877737 c.771G>C synonymous_variant 0.36
rpoA 3877743 c.765T>C synonymous_variant 0.37
rpoA 3877764 c.744C>A synonymous_variant 0.41
rpoA 3877770 c.738A>G synonymous_variant 0.44
rpoA 3877776 c.732T>C synonymous_variant 0.47
rpoA 3877782 c.726T>C synonymous_variant 0.51
rpoA 3877785 c.723C>G synonymous_variant 0.53
rpoA 3877788 c.720G>A synonymous_variant 0.54
rpoA 3877818 c.690A>G synonymous_variant 0.59
rpoA 3877821 c.687C>T synonymous_variant 0.6
rpoA 3877857 c.651G>A synonymous_variant 0.65
rpoA 3877866 c.642G>C synonymous_variant 0.55
rpoA 3877875 c.633T>C synonymous_variant 0.53
rpoA 3877881 c.627G>C synonymous_variant 0.49
rpoA 3877893 c.615C>G synonymous_variant 0.5
rpoA 3877905 c.603A>C synonymous_variant 0.47
rpoA 3877908 c.600T>C synonymous_variant 0.47
rpoA 3877929 p.Ile193Val missense_variant 0.46
rpoA 3877962 c.546G>T synonymous_variant 0.38
rpoA 3877968 c.540C>G synonymous_variant 0.38
rpoA 3877971 p.Asp179Glu missense_variant 0.32
rpoA 3877974 c.534G>C synonymous_variant 0.3
rpoA 3877989 c.519A>G synonymous_variant 0.26
rpoA 3878001 c.507A>G synonymous_variant 0.23
rpoA 3878082 c.426T>C synonymous_variant 0.16
rpoA 3878093 p.Val139Ile missense_variant 0.23
rpoA 3878094 c.414C>G synonymous_variant 0.23
rpoA 3878103 c.405A>G synonymous_variant 0.24
rpoA 3878106 c.402G>C synonymous_variant 0.23
rpoA 3878118 c.390T>C synonymous_variant 0.26
rpoA 3878127 c.381G>C synonymous_variant 0.27
rpoA 3878143 p.Gly122Asp missense_variant 0.36
rpoA 3878157 c.351C>G synonymous_variant 0.38
rpoA 3878166 c.342C>G synonymous_variant 0.36
rpoA 3878184 c.324C>T synonymous_variant 0.31
rpoA 3878193 c.315T>C synonymous_variant 0.32
rpoA 3878196 p.Glu104Ala missense_variant 0.31
rpoA 3878205 c.303T>C synonymous_variant 0.34
rpoA 3878217 c.291A>G synonymous_variant 0.4
rpoA 3878262 p.Ser82Gly missense_variant 0.47
rpoA 3878271 c.237T>C synonymous_variant 0.5
rpoA 3878276 c.232C>T synonymous_variant 0.48
rpoA 3878283 p.Glu75Asp missense_variant 0.47
rpoA 3878295 c.213A>G synonymous_variant 0.55
rpoA 3878322 c.186A>G synonymous_variant 0.62
rpoA 3878331 c.177A>G synonymous_variant 0.59
rpoA 3878334 c.174T>C synonymous_variant 0.57
rpoA 3878337 c.171T>C synonymous_variant 0.57
rpoA 3878346 c.162T>C synonymous_variant 0.6
rpoA 3878364 c.144A>C synonymous_variant 0.49
rpoA 3878370 c.138T>C synonymous_variant 0.47
rpoA 3878391 c.117T>G synonymous_variant 0.39
rpoA 3878394 c.114G>T synonymous_variant 0.39
rpoA 3878400 c.108T>C synonymous_variant 0.39
rpoA 3878403 c.105C>G synonymous_variant 0.38
rpoA 3878415 c.93C>T synonymous_variant 0.24
rpoA 3878421 c.87A>T synonymous_variant 0.21
rpoA 3878672 c.-165A>T upstream_gene_variant 0.17
rpoA 3878689 c.-182G>A upstream_gene_variant 0.22
rpoA 3878694 c.-187A>G upstream_gene_variant 0.25
rpoA 3878698 c.-191A>G upstream_gene_variant 0.28
rpoA 3878701 c.-194C>T upstream_gene_variant 0.29
ddn 3986648 c.-196C>G upstream_gene_variant 0.27
ddn 3986673 c.-171C>T upstream_gene_variant 0.19
ddn 3986696 c.-148G>C upstream_gene_variant 0.16
ddn 3986699 c.-145C>G upstream_gene_variant 0.16
clpC1 4038347 c.2358G>C synonymous_variant 0.17
clpC1 4038356 c.2349T>C synonymous_variant 0.19
clpC1 4038359 c.2346A>G synonymous_variant 0.19
clpC1 4038368 c.2337T>C synonymous_variant 0.18
clpC1 4038380 c.2325C>G synonymous_variant 0.15
clpC1 4038388 c.2317T>C synonymous_variant 0.16
clpC1 4038392 c.2313C>T synonymous_variant 0.16
clpC1 4038395 c.2310C>A synonymous_variant 0.16
clpC1 4038398 c.2307G>A synonymous_variant 0.16
clpC1 4038403 c.2302T>C synonymous_variant 0.16
clpC1 4038419 c.2286T>C synonymous_variant 0.17
clpC1 4038505 p.Met734Leu missense_variant 0.17
clpC1 4038519 p.Arg729Gln missense_variant 0.19
clpC1 4038530 c.2175G>A synonymous_variant 0.19
clpC1 4038533 c.2170_2172delCGCinsAGG synonymous_variant 0.18
clpC1 4038537 p.Thr723Ser missense_variant 0.19
clpC1 4038539 c.2166G>C synonymous_variant 0.23
clpC1 4038569 c.2136C>G synonymous_variant 0.34
clpC1 4038587 c.2118C>G synonymous_variant 0.33
clpC1 4038596 c.2109A>G synonymous_variant 0.24
clpC1 4038602 c.2103G>C synonymous_variant 0.25
clpC1 4038620 p.Gln695Leu missense_variant 0.21
clpC1 4038623 c.2082A>G synonymous_variant 0.2
clpC1 4038640 p.Asp689Asn missense_variant 0.22
clpC1 4038644 p.Glu687Asp missense_variant 0.17
clpC1 4038647 c.2058T>G synonymous_variant 0.18
clpC1 4038658 p.Lys683Gln missense_variant 0.17
clpC1 4038661 p.Ser682Thr missense_variant 0.17
clpC1 4038662 c.2043T>C synonymous_variant 0.17
clpC1 4038670 c.2035C>T synonymous_variant 0.15
clpC1 4038671 c.2034T>G synonymous_variant 0.17
clpC1 4038679 p.Pro676Ala missense_variant 0.19
clpC1 4038683 c.2022T>C synonymous_variant 0.21
clpC1 4038704 c.2001T>C synonymous_variant 0.28
clpC1 4038710 c.1995G>C synonymous_variant 0.28
clpC1 4038713 c.1992T>C synonymous_variant 0.28
clpC1 4038721 c.1984C>T synonymous_variant 0.3
clpC1 4038726 p.Thr660Cys missense_variant 0.28
clpC1 4038755 c.1950G>T synonymous_variant 0.36
clpC1 4038767 c.1938G>C synonymous_variant 0.4
clpC1 4038773 c.1932T>C synonymous_variant 0.41
clpC1 4038790 c.1915C>T synonymous_variant 0.49
clpC1 4038812 c.1893T>C synonymous_variant 0.46
clpC1 4038875 c.1830C>G synonymous_variant 0.57
clpC1 4038878 c.1827A>G synonymous_variant 0.57
clpC1 4038905 c.1800A>C synonymous_variant 0.49
clpC1 4038908 c.1797C>G synonymous_variant 0.46
clpC1 4038911 c.1794G>T synonymous_variant 0.46
clpC1 4038914 c.1791G>C synonymous_variant 0.47
clpC1 4038917 c.1788C>T synonymous_variant 0.46
clpC1 4038923 c.1782A>G synonymous_variant 0.48
clpC1 4038953 c.1752A>G synonymous_variant 0.45
clpC1 4038956 c.1749T>C synonymous_variant 0.43
clpC1 4038965 c.1740T>C synonymous_variant 0.39
clpC1 4038971 c.1734T>C synonymous_variant 0.35
clpC1 4038974 c.1731T>C synonymous_variant 0.31
clpC1 4038989 c.1716T>C synonymous_variant 0.24
clpC1 4038997 c.1708T>C synonymous_variant 0.25
clpC1 4039001 p.Asn568Glu missense_variant 0.24
clpC1 4039004 c.1701C>G synonymous_variant 0.26
clpC1 4039022 c.1683A>G synonymous_variant 0.29
clpC1 4039037 c.1668T>G synonymous_variant 0.26
clpC1 4039067 c.1638G>C synonymous_variant 0.32
clpC1 4039073 c.1632C>G synonymous_variant 0.32
clpC1 4039079 c.1626C>G synonymous_variant 0.31
clpC1 4039085 c.1620A>G synonymous_variant 0.29
clpC1 4039090 c.1615C>T synonymous_variant 0.32
clpC1 4039103 c.1602T>C synonymous_variant 0.34
clpC1 4039106 c.1599G>C synonymous_variant 0.37
clpC1 4039121 c.1584T>C synonymous_variant 0.36
clpC1 4039124 c.1581C>G synonymous_variant 0.33
clpC1 4039127 p.Lys526Asn missense_variant 0.33
clpC1 4039133 c.1572C>A synonymous_variant 0.33
clpC1 4039139 p.Glu522Asp missense_variant 0.33
clpC1 4039142 c.1563A>G synonymous_variant 0.33
clpC1 4039145 c.1560G>C synonymous_variant 0.35
clpC1 4039165 c.1540C>T synonymous_variant 0.34
clpC1 4039169 p.Glu512Asp missense_variant 0.31
clpC1 4039183 c.1522T>C synonymous_variant 0.34
clpC1 4039187 c.1518G>C synonymous_variant 0.34
clpC1 4039208 c.1497C>G synonymous_variant 0.23
clpC1 4039271 c.1434G>A synonymous_variant 0.28
clpC1 4039286 c.1417_1419delCTTinsTTG synonymous_variant 0.24
clpC1 4039292 c.1413C>G synonymous_variant 0.26
clpC1 4039295 c.1410A>C synonymous_variant 0.28
clpC1 4039298 c.1407T>C synonymous_variant 0.28
clpC1 4039310 c.1395A>G synonymous_variant 0.31
clpC1 4039319 c.1386T>C synonymous_variant 0.24
clpC1 4039322 c.1383T>C synonymous_variant 0.2
clpC1 4039328 c.1377A>G synonymous_variant 0.21
clpC1 4039334 c.1371G>C synonymous_variant 0.19
clpC1 4039338 p.Thr456Lys missense_variant 0.17
clpC1 4039352 c.1353C>G synonymous_variant 0.17
clpC1 4039361 c.1344C>G synonymous_variant 0.18
clpC1 4039382 c.1323C>G synonymous_variant 0.16
clpC1 4039409 c.1296T>C synonymous_variant 0.19
clpC1 4039415 p.Glu430Asp missense_variant 0.21
clpC1 4039430 c.1275T>C synonymous_variant 0.29
clpC1 4039442 c.1263A>G synonymous_variant 0.35
clpC1 4039448 c.1257A>G synonymous_variant 0.33
clpC1 4039451 c.1254G>A synonymous_variant 0.32
clpC1 4039454 c.1251A>G synonymous_variant 0.36
clpC1 4039463 c.1242C>G synonymous_variant 0.36
clpC1 4039466 c.1239T>C synonymous_variant 0.36
clpC1 4039469 c.1236T>C synonymous_variant 0.39
clpC1 4039481 c.1224T>C synonymous_variant 0.43
clpC1 4039487 c.1218G>C synonymous_variant 0.41
clpC1 4039556 c.1149G>C synonymous_variant 0.32
clpC1 4039562 c.1143C>T synonymous_variant 0.31
clpC1 4039568 p.Met379Ile missense_variant 0.31
clpC1 4039571 c.1134G>C synonymous_variant 0.31
clpC1 4039576 p.Ala377Ser missense_variant 0.33
clpC1 4039577 c.1128T>C synonymous_variant 0.35
clpC1 4039582 p.Thr375Ser missense_variant 0.34
clpC1 4039601 c.1104G>T synonymous_variant 0.4
clpC1 4039610 c.1095G>C synonymous_variant 0.39
clpC1 4039649 c.1056G>C synonymous_variant 0.54
clpC1 4039652 c.1053G>C synonymous_variant 0.52
clpC1 4039655 c.1050G>C synonymous_variant 0.52
clpC1 4039664 c.1041G>C synonymous_variant 0.54
clpC1 4039682 c.1023C>G synonymous_variant 0.52
clpC1 4039694 c.1011G>A synonymous_variant 0.5
clpC1 4039724 c.981A>G synonymous_variant 0.38
clpC1 4039733 c.972G>T synonymous_variant 0.32
clpC1 4039751 c.954A>G synonymous_variant 0.22
clpC1 4039757 c.948A>G synonymous_variant 0.18
clpC1 4039760 c.945T>C synonymous_variant 0.18
clpC1 4039766 c.939T>C synonymous_variant 0.19
clpC1 4039769 c.936C>G synonymous_variant 0.2
clpC1 4039775 c.930G>C synonymous_variant 0.19
clpC1 4039831 c.874T>C synonymous_variant 0.26
clpC1 4039840 c.865C>T synonymous_variant 0.29
clpC1 4039850 c.855T>C synonymous_variant 0.4
clpC1 4039855 c.850C>T synonymous_variant 0.43
clpC1 4039865 c.840T>C synonymous_variant 0.44
clpC1 4039880 c.825G>A synonymous_variant 0.46
clpC1 4039889 c.816G>C synonymous_variant 0.48
clpC1 4039898 c.807C>G synonymous_variant 0.49
clpC1 4039901 c.804C>G synonymous_variant 0.5
clpC1 4039904 c.801A>G synonymous_variant 0.51
clpC1 4039925 c.780C>G synonymous_variant 0.57
clpC1 4039931 c.774T>C synonymous_variant 0.61
clpC1 4039934 c.771G>T synonymous_variant 0.62
clpC1 4039937 c.768G>C synonymous_variant 0.59
clpC1 4039946 c.759A>T synonymous_variant 0.65
clpC1 4039952 c.753T>C synonymous_variant 0.58
clpC1 4039958 c.747G>C synonymous_variant 0.52
clpC1 4039979 c.726C>G synonymous_variant 0.56
clpC1 4039991 c.714G>T synonymous_variant 0.5
clpC1 4040001 p.His235Ala missense_variant 0.5
clpC1 4040009 c.696C>G synonymous_variant 0.44
clpC1 4040021 c.684A>G synonymous_variant 0.39
clpC1 4040024 c.681A>G synonymous_variant 0.36
clpC1 4040027 c.678C>G synonymous_variant 0.36
clpC1 4040033 c.672G>C synonymous_variant 0.36
clpC1 4040036 c.669C>G synonymous_variant 0.35
clpC1 4040090 c.613_615delTCTinsAGC synonymous_variant 0.4
clpC1 4040093 c.612C>G synonymous_variant 0.41
clpC1 4040126 c.579C>G synonymous_variant 0.46
clpC1 4040135 c.570C>G synonymous_variant 0.46
clpC1 4040144 c.561G>C synonymous_variant 0.47
clpC1 4040147 c.558A>G synonymous_variant 0.45
clpC1 4040153 c.552A>G synonymous_variant 0.41
clpC1 4040159 c.546G>C synonymous_variant 0.38
clpC1 4040165 c.540G>C synonymous_variant 0.32
clpC1 4040168 c.537G>C synonymous_variant 0.28
clpC1 4040201 c.504C>G synonymous_variant 0.32
clpC1 4040204 c.501G>C synonymous_variant 0.33
clpC1 4040207 c.498T>C synonymous_variant 0.3
clpC1 4040213 c.492T>G synonymous_variant 0.32
clpC1 4040225 c.480A>G synonymous_variant 0.35
clpC1 4040228 c.477G>C synonymous_variant 0.4
clpC1 4040231 c.474C>G synonymous_variant 0.45
clpC1 4040237 c.468C>T synonymous_variant 0.5
clpC1 4040249 c.456A>G synonymous_variant 0.5
clpC1 4040257 p.Ala150Thr missense_variant 0.5
clpC1 4040267 c.438A>G synonymous_variant 0.52
clpC1 4040273 c.432T>C synonymous_variant 0.42
clpC1 4040277 c.427_428delTCinsAG synonymous_variant 0.42
clpC1 4040279 c.426C>G synonymous_variant 0.44
clpC1 4040291 c.414G>C synonymous_variant 0.42
clpC1 4040315 p.Glu130Asp missense_variant 0.39
clpC1 4040348 c.357G>C synonymous_variant 0.32
clpC1 4040354 c.351A>G synonymous_variant 0.33
clpC1 4040357 c.348T>C synonymous_variant 0.3
clpC1 4040363 c.342A>G synonymous_variant 0.27
clpC1 4040369 c.336C>G synonymous_variant 0.27
clpC1 4040375 c.330G>C synonymous_variant 0.29
clpC1 4040380 c.325T>C synonymous_variant 0.28
clpC1 4040387 c.318A>G synonymous_variant 0.28
clpC1 4040393 c.312G>C synonymous_variant 0.26
clpC1 4040411 c.294T>C synonymous_variant 0.31
clpC1 4040423 c.282A>G synonymous_variant 0.29
clpC1 4040431 c.274T>C synonymous_variant 0.3
clpC1 4040444 c.261C>G synonymous_variant 0.35
clpC1 4040450 c.255A>G synonymous_variant 0.4
clpC1 4040459 c.246C>G synonymous_variant 0.45
clpC1 4040465 c.240T>C synonymous_variant 0.45
clpC1 4040468 c.237G>C synonymous_variant 0.46
clpC1 4040471 c.234T>C synonymous_variant 0.43
clpC1 4040480 c.225T>C synonymous_variant 0.48
clpC1 4040513 c.192G>A synonymous_variant 0.4
clpC1 4040522 c.183T>C synonymous_variant 0.32
clpC1 4040534 c.171A>G synonymous_variant 0.28
clpC1 4040540 c.165G>C synonymous_variant 0.23
clpC1 4040546 c.159G>T synonymous_variant 0.26
clpC1 4040551 c.154T>C synonymous_variant 0.25
clpC1 4040561 c.144A>G synonymous_variant 0.29
clpC1 4040573 c.132T>G synonymous_variant 0.31
clpC1 4040582 c.123G>C synonymous_variant 0.26
clpC1 4040585 c.120A>G synonymous_variant 0.27
clpC1 4040588 c.117T>C synonymous_variant 0.26
clpC1 4040594 c.111G>A synonymous_variant 0.26
clpC1 4040600 c.103_105delTTAinsCTT synonymous_variant 0.27
clpC1 4040603 c.102T>G synonymous_variant 0.27
clpC1 4040606 c.99T>C synonymous_variant 0.28
clpC1 4040618 c.87C>G synonymous_variant 0.4
clpC1 4040644 c.61A>C synonymous_variant 0.42
clpC1 4040645 c.60C>G synonymous_variant 0.42
clpC1 4040657 c.48T>G synonymous_variant 0.34
clpC1 4040660 c.45G>C synonymous_variant 0.35
clpC1 4040669 c.36C>T synonymous_variant 0.42
clpC1 4040695 c.10C>A synonymous_variant 0.31
panD 4044147 c.135C>G synonymous_variant 0.19
panD 4044150 c.132A>C synonymous_variant 0.26
panD 4044162 c.120A>G synonymous_variant 0.36
panD 4044165 c.117G>C synonymous_variant 0.37
panD 4044180 p.Asp34Glu missense_variant 0.39
panD 4044188 c.94T>C synonymous_variant 0.42
panD 4044189 c.93C>T synonymous_variant 0.42
panD 4044210 c.72C>A synonymous_variant 0.4
panD 4044216 c.66C>T synonymous_variant 0.38
panD 4044232 p.Cys17His missense_variant 0.37
panD 4044237 c.45G>C synonymous_variant 0.35
panD 4044246 c.36C>T synonymous_variant 0.29
panD 4044264 c.18G>C synonymous_variant 0.14
embC 4240723 c.861C>G synonymous_variant 0.14
embC 4240726 c.864G>C synonymous_variant 0.19
embC 4240732 c.870C>T synonymous_variant 0.22
embC 4240765 c.903C>G synonymous_variant 0.3
embC 4240774 c.912C>G synonymous_variant 0.32
embC 4240778 p.His306Asn missense_variant 0.31
embC 4240783 c.921G>C synonymous_variant 0.32
embC 4240789 c.927T>C synonymous_variant 0.31
embC 4240800 p.Tyr313Phe missense_variant 0.33
embC 4240819 c.957A>C synonymous_variant 0.32
embC 4240822 c.960C>G synonymous_variant 0.29
embC 4240831 c.969T>G synonymous_variant 0.2
embC 4241129 c.1267C>T synonymous_variant 0.24
embC 4241135 p.Val425Leu missense_variant 0.24
embC 4241140 c.1278A>G synonymous_variant 0.26
embC 4241158 c.1296T>C synonymous_variant 0.25
embC 4241161 c.1299C>G synonymous_variant 0.24
embC 4241162 p.Leu434Met missense_variant 0.24
embC 4241167 c.1305C>G synonymous_variant 0.26
embC 4241168 c.1306C>T synonymous_variant 0.25
embC 4241197 c.1335G>C synonymous_variant 0.23
embC 4241203 c.1341T>C synonymous_variant 0.22
embC 4241215 c.1353C>G synonymous_variant 0.15
embC 4241584 c.1722T>C synonymous_variant 0.17
embC 4241587 c.1725C>G synonymous_variant 0.17
embC 4241591 p.Leu577Ile missense_variant 0.19
embC 4241611 c.1749G>C synonymous_variant 0.2
embC 4241614 c.1752A>C synonymous_variant 0.2
embC 4241617 c.1755G>A synonymous_variant 0.18
embC 4241623 c.1761C>G synonymous_variant 0.21
embC 4241644 c.1782G>C synonymous_variant 0.17
embC 4241648 c.1786T>C synonymous_variant 0.18
embC 4241656 c.1794G>A synonymous_variant 0.17
embC 4241659 c.1797G>C synonymous_variant 0.17
embA 4242643 c.-590C>T upstream_gene_variant 1.0
embA 4242919 c.-314A>G upstream_gene_variant 0.27
embA 4242922 c.-311C>G upstream_gene_variant 0.29
embA 4242928 c.-305A>G upstream_gene_variant 0.32
embA 4242940 c.-293T>C upstream_gene_variant 0.29
embC 4242941 p.His1027Asn missense_variant 0.29
embA 4242946 c.-287T>C upstream_gene_variant 0.29
embA 4242952 c.-281T>C upstream_gene_variant 0.25
embA 4242974 c.-259C>T upstream_gene_variant 0.26
embC 4242980 p.Met1040Val missense_variant 0.26
embA 4243460 c.228C>T synonymous_variant 1.0
embA 4244885 c.1653A>G synonymous_variant 0.2
embA 4244894 c.1662C>G synonymous_variant 0.18
embA 4244895 p.Thr555Ser missense_variant 0.18
embA 4244900 c.1668G>C synonymous_variant 0.17
embA 4244906 c.1674C>G synonymous_variant 0.17
embA 4244921 c.1689C>G synonymous_variant 0.18
embA 4244930 c.1698G>C synonymous_variant 0.18
embA 4244933 c.1701A>G synonymous_variant 0.18
embA 4244945 c.1713C>G synonymous_variant 0.19
embB 4247437 c.924A>G synonymous_variant 0.17
embB 4247440 c.927C>G synonymous_variant 0.16
embB 4247462 c.949_950delTCinsAG synonymous_variant 0.26
embB 4247470 c.957T>C synonymous_variant 0.24
embB 4247485 c.972C>T synonymous_variant 0.27
embB 4247491 c.978G>C synonymous_variant 0.23
embB 4247494 c.981G>A synonymous_variant 0.23
embB 4247497 c.984T>C synonymous_variant 0.23
embB 4247500 c.987C>G synonymous_variant 0.27
embB 4247512 c.999T>C synonymous_variant 0.32
embB 4247536 c.1023C>G synonymous_variant 0.38
embB 4247543 c.1030_1031delAGinsTC synonymous_variant 0.35
embB 4247554 c.1041T>C synonymous_variant 0.35
embB 4247555 p.Leu348Ile missense_variant 0.35
embB 4247563 p.Met350Ile missense_variant 0.39
embB 4247566 c.1053C>G synonymous_variant 0.39
embB 4247572 c.1059A>G synonymous_variant 0.35
embB 4247576 c.1063C>T synonymous_variant 0.37
embB 4247590 c.1077A>G synonymous_variant 0.35
embB 4247611 c.1098G>C synonymous_variant 0.21
embB 4247614 c.1101T>C synonymous_variant 0.2
embB 4247899 p.Met462Ile missense_variant 0.14
embB 4248085 c.1572T>C synonymous_variant 0.17
embB 4248097 c.1584C>G synonymous_variant 0.18
embB 4248118 c.1605T>C synonymous_variant 0.16
embB 4248173 p.Val554Met missense_variant 0.14
aftB 4267647 p.Asp397Gly missense_variant 0.94
aftB 4267732 p.Arg369Ser missense_variant 0.9
aftB 4268081 c.756A>G synonymous_variant 0.18
aftB 4268099 c.738G>C synonymous_variant 0.17
aftB 4268123 p.Ser238Gly missense_variant 0.19
aftB 4268126 c.711G>C synonymous_variant 0.19
aftB 4268129 c.708T>G synonymous_variant 0.18
aftB 4268138 p.Gly233Ala missense_variant 0.19
aftB 4268144 c.693T>C synonymous_variant 0.21
whiB6 4338595 c.-75delG upstream_gene_variant 1.0
gid 4407588 c.615A>G synonymous_variant 1.0
gid 4407927 p.Glu92Asp missense_variant 1.0