Rv1630 - c.321G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
10 Sensitive
14 RR-TB
16 HR-TB
13 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
42 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 10 |
| La1.8.1 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.9 | 35 |
| lineage4.6.1.2 | 3 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage2.2.1.2 | 3 |
| lineage4.8 | 8 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.4.2 | 1 |
| 2 | |
| lineage4.1.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage2.2 | 1 |
| La1;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1.3 | 1 |
| lineage4.5 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.2.1 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage1.2.2.2 | 1 |
| La2;lineage2.2 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage2.2;lineage4 | 1 |
| La2;lineage4.9 | 1 |
| La1.2 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 97 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9971113 | Other | lineage2.2.1 | None | SRR7240033 | Other | La1.8.1 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1181256 | Other | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR5535933 | Other | lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | SRR5341330 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR6358991 | HR-TB | None | ERR9786444 | Sensitive | lineage4.8 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR4769452 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6359082 | Other | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR3675270 | Other | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR6045053 | Other | lineage4 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6046046 | Other | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782054 | Other | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | ERR4769495 | Other | La1.3 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR752229 | Other | lineage4.5 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | SRR20970016 | Other | lineage2.2.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR3797062 | RR-TB | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR176751 | Other | lineage4.9 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1238558 | Other | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR4796577 | HR-TB | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR2446566 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR4769427 | Other | La1.2 | None | ERR2660539 | Other | lineage4.9 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR18909918 | Other | lineage2.2.1.1 | None |
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