Rv1630 - p.Lys167Arg
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
9 Sensitive
19 RR-TB
9 HR-TB
18 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
36 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.1 | 2 |
| lineage4.4.1.1.1 | 2 |
| lineage2.2.1 | 25 |
| lineage4.8 | 10 |
| lineage4.3.3 | 3 |
| lineage4.4.2 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage4.9 | 23 |
| lineage4.1.2.1 | 2 |
| lineage4.8.1 | 2 |
| lineage3.1.2.1 | 2 |
| lineage4.8.2 | 1 |
| lineage4.2.1 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.3.1.1 | 1 |
| lineage2.2.2 | 2 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage2.2.1.2 | 2 |
| lineage2.2 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4 | 1 |
| lineage4.5 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.1.2 | 2 |
| lineage4.3.4.2.1 | 1 |
| La1.8.1 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage3;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 98 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR10796565 | Other | lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR2660539 | Other | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR4796351 | Sensitive | lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR18002945 | Other | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR21663281 | Sensitive | lineage4.8 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR6045217 | Sensitive | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR5535933 | Other | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR6045053 | Other | lineage4 | None | SRR6046046 | Other | lineage4.9 | None | SRR7070320 | Other | lineage4.8 | None | SRR6045548 | Sensitive | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR4769450 | Other | lineage4.9 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3;lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR29053558 | Sensitive | lineage4.8 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR20970016 | Other | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR7240033 | Other | La1.8.1 | None | ERR6359082 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR1735596 | RR-TB | lineage4.9 | None | ERR10796628 | Other | lineage4.3.3 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR3675230 | Other | lineage3;lineage4 | None | SRR6045347 | Other | lineage4.9 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821119 | Other | lineage4.4.1.1 | None |
|---|
