Run ID: ERR10796565
Sample name:
Date: 31-03-2023 11:11:37
Number of reads: 257928
Percentage reads mapped: 99.98
Strain: lineage4.9
Drug-resistance: RR-TB
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage4 | Euro-American | LAM;T;S;X;H | None | 1.0 |
lineage4.9 | Euro-American (H37Rv-like) | T1 | None | 1.0 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|---|---|---|---|---|
rpoB | 761127 | p.Ser441Ala | missense_variant | 1.0 | rifampicin |
rpoB | 761139 | p.His445Asn | missense_variant | 1.0 | rifampicin |
rrs | 1472733 | n.888G>A | non_coding_transcript_exon_variant | 0.58 | streptomycin |
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
rpoB | 761037 | c.1231_1233delTTGinsCTC | synonymous_variant | 1.0 |
rpoB | 761058 | p.Val418Thr | missense_variant | 1.0 |
rpoB | 761088 | c.1282_1283delAGinsTC | synonymous_variant | 1.0 |
rpoB | 761102 | c.1296A>G | synonymous_variant | 1.0 |
rpoB | 761132 | c.1326G>T | synonymous_variant | 1.0 |
rpoB | 761133 | c.1327T>C | synonymous_variant | 1.0 |
rpoB | 761154 | c.1348_1350delTCGinsAGC | synonymous_variant | 1.0 |
rpoB | 761159 | c.1353G>C | synonymous_variant | 1.0 |
rpoB | 761165 | c.1359G>C | synonymous_variant | 1.0 |
rpoC | 762854 | c.-516G>C | upstream_gene_variant | 1.0 |
rpoB | 762855 | p.Val1017Ile | missense_variant | 1.0 |
rpoB | 762858 | p.Thr1018Ser | missense_variant | 1.0 |
rpoC | 762863 | c.-507T>G | upstream_gene_variant | 1.0 |
rpoB | 762879 | p.Met1025Leu | missense_variant | 1.0 |
rpoC | 762887 | c.-483G>C | upstream_gene_variant | 1.0 |
rpoC | 762896 | c.-474G>C | upstream_gene_variant | 0.5 |
rpoC | 762926 | c.-444C>G | upstream_gene_variant | 0.75 |
rpoC | 762929 | c.-441G>T | upstream_gene_variant | 1.0 |
rpoC | 762932 | c.-438G>C | upstream_gene_variant | 0.67 |
rpoC | 762938 | c.-432G>C | upstream_gene_variant | 0.75 |
rpoC | 762947 | c.-423C>G | upstream_gene_variant | 0.75 |
rpoC | 762962 | c.-408C>T | upstream_gene_variant | 0.75 |
rpoC | 762971 | c.-399G>C | upstream_gene_variant | 1.0 |
rpoC | 762983 | c.-387C>T | upstream_gene_variant | 0.86 |
rpoC | 762989 | c.-381G>C | upstream_gene_variant | 1.0 |
rpoC | 762995 | c.-375G>C | upstream_gene_variant | 1.0 |
rpoB | 763005 | p.Cys1067Gly | missense_variant | 1.0 |
rpoC | 763462 | c.93G>C | synonymous_variant | 1.0 |
rpoC | 763468 | c.99G>C | synonymous_variant | 1.0 |
rpoC | 763483 | c.114G>C | synonymous_variant | 1.0 |
rpoC | 763486 | c.117T>C | synonymous_variant | 1.0 |
rpoC | 763492 | c.123G>C | synonymous_variant | 1.0 |
rpoC | 763528 | c.159G>C | synonymous_variant | 1.0 |
rpoC | 763531 | c.162G>C | synonymous_variant | 1.0 |
rpoC | 763534 | c.165T>C | synonymous_variant | 1.0 |
rpoC | 763537 | c.168C>G | synonymous_variant | 1.0 |
rpoC | 763546 | c.177A>G | synonymous_variant | 1.0 |
rpoC | 763550 | p.Tyr61Ala | missense_variant | 1.0 |
rpoC | 763558 | c.189C>T | synonymous_variant | 1.0 |
rpoC | 763570 | c.201G>C | synonymous_variant | 1.0 |
rpoC | 763578 | p.Phe70Tyr | missense_variant | 1.0 |
rpoC | 763589 | p.Ile74Val | missense_variant | 1.0 |
rpoC | 763606 | c.237C>G | synonymous_variant | 1.0 |
rpoC | 763615 | c.246G>C | synonymous_variant | 1.0 |
rpoC | 763618 | c.249C>T | synonymous_variant | 1.0 |
rpoC | 763622 | p.Ala85Ser | missense_variant | 1.0 |
rpoC | 763636 | c.267T>C | synonymous_variant | 1.0 |
rpoC | 764602 | c.1233C>T | synonymous_variant | 1.0 |
rpoC | 764605 | c.1236G>T | synonymous_variant | 1.0 |
rpoC | 764611 | c.1242G>T | synonymous_variant | 1.0 |
rpoC | 764632 | c.1263T>C | synonymous_variant | 1.0 |
rpoC | 764647 | c.1278C>T | synonymous_variant | 1.0 |
rpoC | 764650 | c.1281G>T | synonymous_variant | 1.0 |
rpoC | 764653 | c.1284G>C | synonymous_variant | 1.0 |
rpoC | 764656 | c.1287C>T | synonymous_variant | 0.75 |
rpoC | 764662 | c.1293G>C | synonymous_variant | 1.0 |
rpoC | 764671 | c.1302G>C | synonymous_variant | 0.4 |
rpoC | 764677 | c.1308C>G | synonymous_variant | 0.6 |
rpoC | 764678 | p.Lys437Gln | missense_variant | 0.6 |
rpoC | 764695 | c.1326T>C | synonymous_variant | 0.4 |
rpoC | 764703 | p.Lys445Ser | missense_variant | 0.4 |
rpoC | 764706 | p.Leu446Gln | missense_variant | 1.0 |
rpoC | 764713 | c.1344G>C | synonymous_variant | 1.0 |
rpoC | 764731 | c.1362G>C | synonymous_variant | 1.0 |
rpoC | 764737 | c.1368G>C | synonymous_variant | 1.0 |
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 |
rrs | 1471853 | n.8T>C | non_coding_transcript_exon_variant | 0.5 |
rrs | 1471896 | n.51T>C | non_coding_transcript_exon_variant | 0.68 |
rrs | 1471900 | n.55C>T | non_coding_transcript_exon_variant | 0.68 |
rrs | 1471911 | n.66C>A | non_coding_transcript_exon_variant | 0.77 |
rrs | 1472068 | n.223T>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472075 | n.230A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472078 | n.233C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472108 | n.263C>T | non_coding_transcript_exon_variant | 0.93 |
rrs | 1472122 | n.277G>T | non_coding_transcript_exon_variant | 0.62 |
rrs | 1472123 | n.278A>T | non_coding_transcript_exon_variant | 0.77 |
rrs | 1472124 | n.279C>T | non_coding_transcript_exon_variant | 0.88 |
rrs | 1472150 | n.305T>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472150 | n.305T>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472151 | n.306C>A | non_coding_transcript_exon_variant | 0.45 |
rrs | 1472155 | n.310C>T | non_coding_transcript_exon_variant | 0.83 |
rrs | 1472160 | n.315C>T | non_coding_transcript_exon_variant | 0.45 |
rrs | 1472172 | n.327T>C | non_coding_transcript_exon_variant | 0.38 |
rrs | 1472225 | n.380C>A | non_coding_transcript_exon_variant | 0.35 |
rrs | 1472251 | n.406G>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472258 | n.413A>G | non_coding_transcript_exon_variant | 0.37 |
rrs | 1472259 | n.414C>A | non_coding_transcript_exon_variant | 0.73 |
rrs | 1472285 | n.440A>G | non_coding_transcript_exon_variant | 0.88 |
rrs | 1472325 | n.480G>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472330 | n.485G>T | non_coding_transcript_exon_variant | 0.89 |
rrs | 1472338 | n.493A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472344 | n.499C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472379 | n.534T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472382 | n.537G>A | non_coding_transcript_exon_variant | 0.29 |
rrs | 1472400 | n.555C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472412 | n.567A>G | non_coding_transcript_exon_variant | 0.33 |
rrs | 1472416 | n.571C>T | non_coding_transcript_exon_variant | 0.43 |
rrs | 1472422 | n.577T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472484 | n.639A>T | non_coding_transcript_exon_variant | 0.36 |
rrs | 1472489 | n.644A>T | non_coding_transcript_exon_variant | 0.44 |
rrs | 1472494 | n.649A>G | non_coding_transcript_exon_variant | 0.76 |
rrs | 1472496 | n.651T>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472498 | n.653C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472513 | n.668T>C | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472518 | n.673G>T | non_coding_transcript_exon_variant | 0.26 |
rrs | 1472544 | n.699C>A | non_coding_transcript_exon_variant | 0.3 |
rrs | 1472545 | n.700A>T | non_coding_transcript_exon_variant | 0.3 |
rrs | 1472549 | n.704G>A | non_coding_transcript_exon_variant | 0.63 |
rrs | 1472566 | n.721G>A | non_coding_transcript_exon_variant | 0.32 |
rrs | 1472571 | n.726G>C | non_coding_transcript_exon_variant | 0.33 |
rrs | 1472581 | n.736A>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472581 | n.736A>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472584 | n.739A>T | non_coding_transcript_exon_variant | 0.61 |
rrs | 1472598 | n.753A>C | non_coding_transcript_exon_variant | 0.35 |
rrs | 1472599 | n.754G>T | non_coding_transcript_exon_variant | 0.35 |
rrs | 1472647 | n.802C>T | non_coding_transcript_exon_variant | 0.41 |
rrs | 1472655 | n.810G>T | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472660 | n.815T>C | non_coding_transcript_exon_variant | 0.76 |
rrs | 1472690 | n.845C>T | non_coding_transcript_exon_variant | 0.57 |
rrs | 1472692 | n.847T>C | non_coding_transcript_exon_variant | 0.63 |
rrs | 1472707 | n.862A>T | non_coding_transcript_exon_variant | 0.27 |
rrs | 1472713 | n.868T>C | non_coding_transcript_exon_variant | 0.43 |
rrs | 1472714 | n.869A>G | non_coding_transcript_exon_variant | 0.55 |
rrs | 1472716 | n.871C>T | non_coding_transcript_exon_variant | 0.48 |
rrs | 1472742 | n.897C>T | non_coding_transcript_exon_variant | 0.6 |
rrs | 1472744 | n.899A>G | non_coding_transcript_exon_variant | 0.61 |
rrs | 1472781 | n.936C>T | non_coding_transcript_exon_variant | 0.73 |
rrs | 1472790 | n.945T>C | non_coding_transcript_exon_variant | 0.26 |
rrs | 1472793 | n.948A>T | non_coding_transcript_exon_variant | 0.74 |
rrs | 1472803 | n.958T>A | non_coding_transcript_exon_variant | 0.74 |
rrs | 1472824 | n.979T>A | non_coding_transcript_exon_variant | 0.98 |
rrs | 1472825 | n.980G>A | non_coding_transcript_exon_variant | 0.48 |
rrs | 1472827 | n.982G>T | non_coding_transcript_exon_variant | 0.39 |
rrs | 1472828 | n.983T>C | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472840 | n.995A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472875 | n.1030T>C | non_coding_transcript_exon_variant | 0.8 |
rrs | 1472880 | n.1035G>A | non_coding_transcript_exon_variant | 0.35 |
rrs | 1472895 | n.1050C>T | non_coding_transcript_exon_variant | 0.98 |
rrs | 1472954 | n.1109T>C | non_coding_transcript_exon_variant | 0.37 |
rrs | 1472956 | n.1111T>C | non_coding_transcript_exon_variant | 0.73 |
rrs | 1472957 | n.1112C>T | non_coding_transcript_exon_variant | 0.47 |
rrs | 1472958 | n.1113A>G | non_coding_transcript_exon_variant | 0.53 |
rrs | 1472973 | n.1128A>T | non_coding_transcript_exon_variant | 0.79 |
rrs | 1472974 | n.1129A>G | non_coding_transcript_exon_variant | 0.53 |
rrs | 1472988 | n.1143T>C | non_coding_transcript_exon_variant | 0.55 |
rrs | 1472990 | n.1145A>G | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472992 | n.1147A>G | non_coding_transcript_exon_variant | 0.35 |
rrs | 1473005 | n.1160C>T | non_coding_transcript_exon_variant | 0.34 |
rrs | 1473035 | n.1190G>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473055 | n.1210C>T | non_coding_transcript_exon_variant | 0.99 |
rrs | 1473056 | n.1211A>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473066 | n.1221A>G | non_coding_transcript_exon_variant | 0.99 |
rrs | 1473088 | n.1243A>G | non_coding_transcript_exon_variant | 0.99 |
rrs | 1473093 | n.1248C>T | non_coding_transcript_exon_variant | 0.35 |
rrs | 1473100 | n.1255G>A | non_coding_transcript_exon_variant | 0.99 |
rrs | 1473104 | n.1259C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473110 | n.1265T>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473111 | n.1266A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473121 | n.1276T>C | non_coding_transcript_exon_variant | 0.96 |
rrs | 1473123 | n.1278A>T | non_coding_transcript_exon_variant | 0.86 |
rrs | 1473145 | n.1300C>T | non_coding_transcript_exon_variant | 0.45 |
rrs | 1473148 | n.1303G>T | non_coding_transcript_exon_variant | 0.64 |
rrs | 1473163 | n.1318C>A | non_coding_transcript_exon_variant | 0.64 |
rrs | 1473166 | n.1321G>A | non_coding_transcript_exon_variant | 0.46 |
rrs | 1473172 | n.1327T>G | non_coding_transcript_exon_variant | 0.33 |
rrs | 1473173 | n.1328C>T | non_coding_transcript_exon_variant | 0.83 |
rrs | 1473221 | n.1376C>T | non_coding_transcript_exon_variant | 0.81 |
rrs | 1473252 | n.1407T>C | non_coding_transcript_exon_variant | 0.68 |
rrs | 1473259 | n.1414C>T | non_coding_transcript_exon_variant | 0.69 |
rrs | 1473262 | n.1417T>C | non_coding_transcript_exon_variant | 0.37 |
rrs | 1473276 | n.1431A>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473277 | n.1432G>A | non_coding_transcript_exon_variant | 0.49 |
rrs | 1473301 | n.1456T>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473316 | n.1471C>T | non_coding_transcript_exon_variant | 0.99 |
rrl | 1473384 | n.-274A>G | upstream_gene_variant | 0.67 |
rrl | 1474155 | n.498G>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474163 | n.506C>T | non_coding_transcript_exon_variant | 0.33 |
rrl | 1474164 | n.507C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474171 | n.514C>T | non_coding_transcript_exon_variant | 0.54 |
rrl | 1474181 | n.524C>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474184 | n.527C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474185 | n.528G>A | non_coding_transcript_exon_variant | 0.44 |
rrl | 1474197 | n.540C>T | non_coding_transcript_exon_variant | 0.91 |
rrl | 1474199 | n.542G>C | non_coding_transcript_exon_variant | 0.79 |
rrl | 1474200 | n.545delT | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474249 | n.592G>T | non_coding_transcript_exon_variant | 0.96 |
rrl | 1474271 | n.614A>G | non_coding_transcript_exon_variant | 0.71 |
rrl | 1474272 | n.615C>T | non_coding_transcript_exon_variant | 0.71 |
rrl | 1474275 | n.618T>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474351 | n.694G>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474353 | n.696A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474355 | n.698A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474362 | n.705A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474387 | n.730C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474393 | n.736A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474402 | n.745T>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474406 | n.749T>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474448 | n.791T>C | non_coding_transcript_exon_variant | 0.79 |
rrl | 1474454 | n.797G>A | non_coding_transcript_exon_variant | 0.63 |
rrl | 1474467 | n.810A>G | non_coding_transcript_exon_variant | 0.96 |
rrl | 1474488 | n.831G>T | non_coding_transcript_exon_variant | 0.99 |
rrl | 1474495 | n.838G>A | non_coding_transcript_exon_variant | 0.92 |
rrl | 1474498 | n.841G>T | non_coding_transcript_exon_variant | 0.71 |
rrl | 1474505 | n.848C>G | non_coding_transcript_exon_variant | 0.71 |
rrl | 1474508 | n.851C>T | non_coding_transcript_exon_variant | 0.91 |
rrl | 1474516 | n.859C>A | non_coding_transcript_exon_variant | 0.99 |
rrl | 1474527 | n.870T>C | non_coding_transcript_exon_variant | 0.73 |
rrl | 1474537 | n.880G>A | non_coding_transcript_exon_variant | 0.99 |
rrl | 1474542 | n.885A>G | non_coding_transcript_exon_variant | 0.79 |
rrl | 1474626 | n.969T>C | non_coding_transcript_exon_variant | 0.54 |
rrl | 1474632 | n.975G>T | non_coding_transcript_exon_variant | 0.39 |
rrl | 1474634 | n.977T>C | non_coding_transcript_exon_variant | 0.57 |
rrl | 1474634 | n.977T>G | non_coding_transcript_exon_variant | 0.55 |
rrl | 1474636 | n.979A>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474637 | n.980C>T | non_coding_transcript_exon_variant | 0.55 |
rrl | 1474638 | n.981C>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474640 | n.983C>T | non_coding_transcript_exon_variant | 0.39 |
rrl | 1474658 | n.1001A>G | non_coding_transcript_exon_variant | 0.32 |
rrl | 1474663 | n.1006C>T | non_coding_transcript_exon_variant | 0.59 |
rrl | 1474677 | n.1020A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474692 | n.1035G>A | non_coding_transcript_exon_variant | 0.49 |
rrl | 1474709 | n.1052G>A | non_coding_transcript_exon_variant | 0.43 |
rrl | 1474734 | n.1077G>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474734 | n.1077G>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474749 | n.1092C>T | non_coding_transcript_exon_variant | 0.31 |
rrl | 1474753 | n.1097delC | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474760 | n.1103A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474779 | n.1122G>A | non_coding_transcript_exon_variant | 0.28 |
rrl | 1474794 | n.1137C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474802 | n.1145T>C | non_coding_transcript_exon_variant | 0.25 |
rrl | 1474824 | n.1167A>G | non_coding_transcript_exon_variant | 0.74 |
rrl | 1474830 | n.1173A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474831 | n.1174A>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474831 | n.1174A>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474832 | n.1175A>T | non_coding_transcript_exon_variant | 0.58 |
rrl | 1474864 | n.1207C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474903 | n.1246T>C | non_coding_transcript_exon_variant | 0.79 |
rrl | 1474913 | n.1256T>C | non_coding_transcript_exon_variant | 0.99 |
rrl | 1474951 | n.1294C>A | non_coding_transcript_exon_variant | 0.43 |
rrl | 1475026 | n.1369G>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475031 | n.1374G>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475059 | n.1403_1404insTA | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475062 | n.1405A>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475065 | n.1409_1411delCAA | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475080 | n.1425_1426delCC | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475090 | n.1433A>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475104 | n.1447T>A | non_coding_transcript_exon_variant | 0.97 |
rrl | 1475114 | n.1457C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475124 | n.1467A>T | non_coding_transcript_exon_variant | 0.98 |
rrl | 1475171 | n.1514C>T | non_coding_transcript_exon_variant | 0.8 |
rrl | 1475172 | n.1515A>G | non_coding_transcript_exon_variant | 0.64 |
rrl | 1475175 | n.1518G>C | non_coding_transcript_exon_variant | 0.36 |
rrl | 1475499 | n.1842C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475518 | n.1861A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475521 | n.1864T>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475526 | n.1869C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475529 | n.1872A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475532 | n.1875A>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475538 | n.1881T>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475544 | n.1887A>T | non_coding_transcript_exon_variant | 0.44 |
rrl | 1475545 | n.1888T>G | non_coding_transcript_exon_variant | 0.44 |
rrl | 1475548 | n.1891C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475549 | n.1892T>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475649 | n.1992A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475655 | n.1998T>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475659 | n.2002G>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475686 | n.2029C>G | non_coding_transcript_exon_variant | 0.52 |
rrl | 1475696 | n.2039T>C | non_coding_transcript_exon_variant | 0.87 |
rrl | 1475699 | n.2042C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475703 | n.2046A>G | non_coding_transcript_exon_variant | 0.88 |
rrl | 1475715 | n.2058G>C | non_coding_transcript_exon_variant | 0.39 |
rrl | 1475751 | n.2094C>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475754 | n.2097G>A | non_coding_transcript_exon_variant | 0.4 |
rrl | 1475774 | n.2117C>T | non_coding_transcript_exon_variant | 0.51 |
rrl | 1475777 | n.2120A>T | non_coding_transcript_exon_variant | 0.92 |
rrl | 1475881 | n.2224T>C | non_coding_transcript_exon_variant | 0.45 |
rrl | 1475883 | n.2226A>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475883 | n.2226A>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475884 | n.2227A>G | non_coding_transcript_exon_variant | 0.61 |
rrl | 1475898 | n.2241A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475899 | n.2242G>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475900 | n.2243A>G | non_coding_transcript_exon_variant | 0.38 |
rrl | 1475916 | n.2259C>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475916 | n.2259C>T | non_coding_transcript_exon_variant | 0.99 |
rrl | 1475937 | n.2280A>T | non_coding_transcript_exon_variant | 0.62 |
rrl | 1475943 | n.2286G>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475945 | n.2288C>A | non_coding_transcript_exon_variant | 0.95 |
rrl | 1475952 | n.2295A>G | non_coding_transcript_exon_variant | 0.99 |
rrl | 1475970 | n.2313C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475975 | n.2318C>T | non_coding_transcript_exon_variant | 0.54 |
rrl | 1475977 | n.2320A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475988 | n.2331A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475991 | n.2334T>C | non_coding_transcript_exon_variant | 0.4 |
rrl | 1475992 | n.2335T>G | non_coding_transcript_exon_variant | 0.43 |
rrl | 1475995 | n.2338G>T | non_coding_transcript_exon_variant | 0.75 |
rrl | 1475998 | n.2341C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475999 | n.2342G>A | non_coding_transcript_exon_variant | 0.86 |
rrl | 1476001 | n.2344T>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476110 | n.2453G>C | non_coding_transcript_exon_variant | 0.93 |
rrl | 1476113 | n.2456T>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476131 | n.2474C>T | non_coding_transcript_exon_variant | 0.91 |
rrl | 1476164 | n.2507A>G | non_coding_transcript_exon_variant | 0.58 |
rrl | 1476179 | n.2522C>T | non_coding_transcript_exon_variant | 0.79 |
rrl | 1476194 | n.2537A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476200 | n.2543A>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476201 | n.2544C>T | non_coding_transcript_exon_variant | 0.44 |
rrl | 1476204 | n.2547C>T | non_coding_transcript_exon_variant | 0.79 |
rrl | 1476207 | n.2550T>C | non_coding_transcript_exon_variant | 0.56 |
rrl | 1476214 | n.2557G>T | non_coding_transcript_exon_variant | 0.69 |
rrl | 1476215 | n.2558C>T | non_coding_transcript_exon_variant | 0.7 |
rrl | 1476221 | n.2564T>C | non_coding_transcript_exon_variant | 0.64 |
rrl | 1476224 | n.2567A>G | non_coding_transcript_exon_variant | 0.98 |
rrl | 1476245 | n.2588C>T | non_coding_transcript_exon_variant | 0.57 |
rrl | 1476252 | n.2595T>G | non_coding_transcript_exon_variant | 0.87 |
rrl | 1476256 | n.2599A>G | non_coding_transcript_exon_variant | 0.86 |
rrl | 1476260 | n.2603A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476267 | n.2610G>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476276 | n.2619C>A | non_coding_transcript_exon_variant | 0.4 |
rrl | 1476279 | n.2622G>A | non_coding_transcript_exon_variant | 0.4 |
rrl | 1476280 | n.2623A>C | non_coding_transcript_exon_variant | 0.29 |
rrl | 1476281 | n.2624T>C | non_coding_transcript_exon_variant | 0.71 |
rrl | 1476294 | n.2637A>G | non_coding_transcript_exon_variant | 0.89 |
rrl | 1476295 | n.2638C>G | non_coding_transcript_exon_variant | 0.8 |
rrl | 1476296 | n.2639C>T | non_coding_transcript_exon_variant | 0.78 |
rrl | 1476297 | n.2640C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476301 | n.2644A>T | non_coding_transcript_exon_variant | 0.42 |
rrl | 1476311 | n.2654G>C | non_coding_transcript_exon_variant | 0.6 |
rrl | 1476332 | n.2675G>C | non_coding_transcript_exon_variant | 0.78 |
rrl | 1476338 | n.2681C>T | non_coding_transcript_exon_variant | 0.74 |
rrl | 1476353 | n.2696G>T | non_coding_transcript_exon_variant | 0.78 |
rrl | 1476358 | n.2701T>C | non_coding_transcript_exon_variant | 0.82 |
rrl | 1476369 | n.2712C>T | non_coding_transcript_exon_variant | 0.8 |
rrl | 1476372 | n.2715T>C | non_coding_transcript_exon_variant | 0.8 |
rrl | 1476382 | n.2725A>G | non_coding_transcript_exon_variant | 0.82 |
rrl | 1476383 | n.2726T>A | non_coding_transcript_exon_variant | 0.84 |
rrl | 1476425 | n.2768G>T | non_coding_transcript_exon_variant | 0.78 |
rrl | 1476428 | n.2771C>T | non_coding_transcript_exon_variant | 0.9 |
rrl | 1476429 | n.2772A>C | non_coding_transcript_exon_variant | 0.82 |
rrl | 1476481 | n.2824T>C | non_coding_transcript_exon_variant | 0.86 |
rrl | 1476506 | n.2849T>C | non_coding_transcript_exon_variant | 0.98 |
rrl | 1476513 | n.2856G>T | non_coding_transcript_exon_variant | 0.35 |
rrl | 1476514 | n.2857C>T | non_coding_transcript_exon_variant | 0.61 |
rrl | 1476515 | n.2858C>T | non_coding_transcript_exon_variant | 0.4 |
rrl | 1476519 | n.2862C>G | non_coding_transcript_exon_variant | 0.55 |
rrl | 1476523 | n.2866T>C | non_coding_transcript_exon_variant | 0.36 |
rrl | 1476524 | n.2867C>A | non_coding_transcript_exon_variant | 0.99 |
rrl | 1476525 | n.2868A>G | non_coding_transcript_exon_variant | 0.98 |
rrl | 1476528 | n.2871A>G | non_coding_transcript_exon_variant | 0.33 |
rrl | 1476530 | n.2873C>T | non_coding_transcript_exon_variant | 0.45 |
rrl | 1476536 | n.2879G>A | non_coding_transcript_exon_variant | 0.93 |
rrl | 1476538 | n.2881A>G | non_coding_transcript_exon_variant | 0.93 |
rrl | 1476539 | n.2882A>G | non_coding_transcript_exon_variant | 0.88 |
rrl | 1476540 | n.2883C>G | non_coding_transcript_exon_variant | 0.41 |
rrl | 1476584 | n.2927C>T | non_coding_transcript_exon_variant | 0.98 |
rrl | 1476585 | n.2928A>G | non_coding_transcript_exon_variant | 0.98 |
rrl | 1476600 | n.2943A>C | non_coding_transcript_exon_variant | 0.84 |
rrl | 1476608 | n.2951C>G | non_coding_transcript_exon_variant | 0.95 |
rrl | 1476614 | n.2957A>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476616 | n.2959A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476619 | n.2962C>T | non_coding_transcript_exon_variant | 0.89 |
rrl | 1476628 | n.2971T>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476629 | n.2972C>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476633 | n.2976A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476664 | n.3007T>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476668 | n.3011C>T | non_coding_transcript_exon_variant | 1.0 |
rpsA | 1833688 | c.147C>T | synonymous_variant | 1.0 |
rpsA | 1833694 | c.153G>C | synonymous_variant | 1.0 |
rpsA | 1833700 | c.159C>T | synonymous_variant | 1.0 |
rpsA | 1833703 | c.162C>T | synonymous_variant | 1.0 |
rpsA | 1833727 | c.186G>C | synonymous_variant | 1.0 |
rpsA | 1833732 | p.Pro64Leu | missense_variant | 1.0 |
rpsA | 1833736 | c.195C>T | synonymous_variant | 1.0 |
rpsA | 1833742 | c.201A>G | synonymous_variant | 1.0 |
rpsA | 1833770 | p.Asn77Asp | missense_variant | 1.0 |
rpsA | 1833776 | p.Val79Ile | missense_variant | 1.0 |
rpsA | 1833781 | c.240T>C | synonymous_variant | 1.0 |
rpsA | 1833790 | c.249T>C | synonymous_variant | 1.0 |
rpsA | 1833970 | c.429G>C | synonymous_variant | 1.0 |
rpsA | 1833979 | c.438T>C | synonymous_variant | 1.0 |
rpsA | 1833985 | c.444G>T | synonymous_variant | 1.0 |
rpsA | 1833994 | c.453G>C | synonymous_variant | 1.0 |
rpsA | 1834009 | c.468C>T | synonymous_variant | 1.0 |
rpsA | 1834012 | c.471G>C | synonymous_variant | 1.0 |
rpsA | 1834024 | c.483G>T | synonymous_variant | 1.0 |
rpsA | 1834034 | p.Ile165Val | missense_variant | 1.0 |
rpsA | 1834040 | p.Lys167Arg | missense_variant | 1.0 |
rpsA | 1834046 | p.Ile169Leu | missense_variant | 1.0 |
rpsA | 1834054 | c.513C>G | synonymous_variant | 0.95 |
rpsA | 1834093 | c.552G>C | synonymous_variant | 1.0 |
rpsA | 1834096 | c.555G>C | synonymous_variant | 1.0 |
rpsA | 1834102 | c.561T>C | synonymous_variant | 0.93 |
rpsA | 1834114 | c.573G>C | synonymous_variant | 0.8 |
rpsA | 1834129 | c.588C>G | synonymous_variant | 0.5 |
rpsA | 1834189 | c.648G>T | synonymous_variant | 1.0 |
rpsA | 1834195 | c.654G>C | synonymous_variant | 1.0 |
rpsA | 1834228 | c.687C>T | synonymous_variant | 1.0 |
rpsA | 1834234 | c.693G>C | synonymous_variant | 1.0 |
rpsA | 1834240 | c.699T>C | synonymous_variant | 1.0 |
rpsA | 1834246 | c.705G>T | synonymous_variant | 1.0 |
rpsA | 1834249 | c.708T>C | synonymous_variant | 1.0 |
rpsA | 1834261 | c.720A>G | synonymous_variant | 1.0 |
rpsA | 1834264 | c.723G>C | synonymous_variant | 1.0 |
rpsA | 1834294 | c.753G>C | synonymous_variant | 1.0 |
rpsA | 1834298 | p.Gln253Glu | missense_variant | 1.0 |
rpsA | 1834306 | c.765T>C | synonymous_variant | 1.0 |
rpsA | 1834307 | p.Asp256Gln | missense_variant | 1.0 |
rpsA | 1834312 | c.771G>A | synonymous_variant | 1.0 |
rpsA | 1834327 | c.786G>T | synonymous_variant | 1.0 |
embA | 4244220 | c.988C>T | synonymous_variant | 1.0 |