EBG00000313339 - n.2858C>T
Drug resistance types
35 Sensitive
96 RR-TB
25 HR-TB
103 MDR-TB
41 Pre-XDR-TB
3 XDR-TB
325 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 87 |
| lineage5.1.1 | 2 |
| lineage1.1.3.1 | 2 |
| lineage3 | 36 |
| lineage4.3 | 3 |
| lineage4.8 | 76 |
| lineage4.6.1.2 | 6 |
| lineage4.1.2.1 | 27 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.8.1 | 5 |
| lineage4.2.1 | 16 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage3.1.2.1 | 4 |
| lineage4.3.2 | 5 |
| lineage2.2.1 | 115 |
| lineage2.2.1;lineage4.8 | 2 |
| lineage4.7 | 6 |
| lineage1.2.1.1 | 2 |
| lineage3.1.1;lineage4 | 1 |
| lineage4.2.2.2 | 6 |
| lineage4.4.1.1 | 16 |
| lineage2.2.1;lineage4 | 2 |
| lineage4.3.3;lineage4.8 | 4 |
| lineage3.1.2.2 | 1 |
| lineage4.3.3 | 19 |
| lineage4.3.4.2.1 | 9 |
| lineage4.6.5 | 2 |
| lineage4.3.1.1 | 6 |
| lineage4.1.2 | 9 |
| lineage1.2.2.2 | 4 |
| lineage2.2.1.2 | 1 |
| lineage4.1.1.1 | 8 |
| lineage4.8.2 | 1 |
| lineage2;lineage4 | 1 |
| lineage4.3.4.2 | 7 |
| lineage4.1.1.3 | 11 |
| lineage4.1.1.3.1 | 4 |
| 1 | |
| lineage3.1.1 | 9 |
| lineage4.3.4.1 | 6 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage2.2.1.1 | 5 |
| lineage4.1.2.1;lineage4.9 | 2 |
| lineage1.2.1.2.1 | 2 |
| lineage4.6 | 1 |
| lineage1.1.2 | 2 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage2.2.2 | 9 |
| lineage4.3;lineage4.9 | 1 |
| lineage4 | 4 |
| lineage3.1.2 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage4.2.1.1 | 3 |
| lineage4.9.1 | 1 |
| lineage4.4.1.2 | 2 |
| lineage4.1.1.2 | 1 |
| lineage1 | 2 |
| lineage3;lineage4 | 2 |
| lineage4.2.2 | 2 |
| La1.3 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.6.2.2 | 6 |
| La3;lineage4.9 | 1 |
| lineage4.4.2 | 5 |
| La1.8.1 | 7 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage4.3.4.1;lineage4.9 | 2 |
| lineage4.4.1.1.1 | 5 |
| lineage6 | 3 |
| lineage1.1.1.1 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| La2 | 1 |
| La1.6 | 1 |
| lineage4.5 | 2 |
| lineage2.2.2;lineage4 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.2.1;lineage2.2.2 | 1 |
| La1.7.1 | 3 |
| lineage1.1.3.3 | 1 |
| lineage4.1 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.1.3 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.4 | 1 |
| lineage3.1 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage4.3.4.2;lineage4.9 | 1 |
| lineage4.6.2 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.6.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 628 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4819383 | RR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR502517 | Other | lineage5.1.1 | None | ERR4814617 | Other | lineage1.1.3.1 | None | SRR3675527 | Other | lineage4.9 | None | ERR10796598 | Other | lineage4.9 | None | ERR867573 | Other | lineage4.9 | None | SRR1062918 | Other | lineage3 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR978754 | RR-TB | lineage4.8 | None | SRR19303899 | Other | lineage3 | None | SRR7070144 | Other | lineage4.8 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR6046291 | Other | lineage3 | None | ERR2229148 | Other | lineage4.8 | dk | SRR1173770 | Other | lineage4.9 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | ERR4818977 | Other | lineage4.1.2.1 | None | ERR978734 | RR-TB | lineage4.8 | None | SRR1181256 | Other | lineage4.9 | None | ERR017781 | Other | lineage3 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR6044952 | Other | lineage4.9 | None | SRR6045002 | RR-TB | lineage4.9 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR7069097 | Other | lineage3.1.2.1 | None | SRR7069314 | Other | lineage3 | None | ERR4769472 | Other | lineage4.9 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796591 | Other | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18213736 | Other | lineage3 | None | ERR2600561 | Other | lineage2.2.1;lineage4.8 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR7645928 | Other | lineage4.7 | None | ERR10796560 | Other | lineage4.9 | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR4820151 | Other | lineage4.8 | None | SRR7069033 | Sensitive | lineage4.2.1 | None | ERR3283046 | Sensitive | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR978755 | RR-TB | lineage4.8 | None | SRR6046275 | Other | lineage3.1.1;lineage4 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | SRR7069347 | Other | lineage4.1.2.1 | None | SRR7069931 | Other | lineage4.2.2.2 | None | SRR11342684 | HR-TB | lineage4.4.1.1 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | ERR2600562 | MDR-TB | lineage2.2.1;lineage4.8 | None | ERR4819198 | Other | lineage2.2.1 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR4819017 | Other | lineage3 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR6046440 | Other | lineage3.1.2.2 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | ERR4820720 | Other | lineage4.1.2.1 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | ERR3283033 | Sensitive | lineage4.9 | None | SRR22424765 | HR-TB | lineage4.8 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR978726 | RR-TB | lineage4.8 | None | SRR6046210 | Other | lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | SRR7131229 | Other | lineage4.1.2.1 | None | ERR10796626 | Other | lineage4.1.2.1 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR6046117 | Other | lineage4.9 | None | ERR4815923 | Sensitive | lineage4.8 | None | SRR7070469 | Other | lineage4.3.1.1 | None | ERR10796581 | Other | lineage4.1.2 | None | SRR7070446 | Other | lineage3 | None | SRR7069946 | Other | lineage4.8 | None | SRR7070369 | Other | lineage1.2.2.2 | None | SRR3675225 | Other | lineage2.2.1.2 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303817 | Other | lineage2.2.1 | None | SRR19304115 | Other | lineage4.1.2.1 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | ERR038289 | Other | lineage4.3.3 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR4816531 | Other | lineage4.1.2 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | SRR1173185 | Other | lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | ERR2509886 | Other | lineage3 | None | SRR7069074 | Other | lineage3 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR6045384 | Other | lineage4.1.2.1 | None | SRR1173450 | Other | lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR1196478 | Other | lineage4.9 | None | SRR7069027 | MDR-TB | lineage4.3.4.2 | None | SRR7070602 | Other | lineage4.2.1 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR4821054 | Sensitive | lineage3 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR10796566 | Other | lineage4.9 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4818507 | Other | lineage4.1.2.1 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR10796576 | Sensitive | lineage4.9 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR10796577 | Other | lineage4.9 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR4817069 | RR-TB | None | SRR7070134 | Other | lineage3.1.1 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR11342695 | MDR-TB | lineage4.8 | None | ERR978757 | RR-TB | lineage4.8 | None | ERR10796635 | Other | lineage4.8 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR1173281 | Other | lineage3 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR6046729 | Other | lineage3 | None | SRR5818388 | Other | lineage4.9 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | ERR10796599 | Other | lineage4.8 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR1175474 | Other | lineage4.9 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR7069839 | Other | lineage4.8 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR7131061 | Other | lineage2.2.1 | None | ERR867544 | Other | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR10796592 | Other | lineage4.9 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR4817398 | Other | lineage3.1.1 | None | ERR4817915 | Other | lineage4.9 | None | ERR4829328 | Other | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR5163959 | Other | lineage4.9 | None | ERR4821286 | Other | lineage4.8 | None | ERR4821214 | Other | lineage1.2.1.2.1 | None | SRR1140716 | Other | lineage3 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1173170 | Other | lineage4.9 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | ERR978750 | RR-TB | lineage4.8 | None | SRR7068912 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | ERR2851354 | Other | lineage4.9 | None | SRR6044936 | Other | lineage4.6 | None | SRR6045424 | Other | lineage1.1.2 | None | ERR978733 | RR-TB | lineage4.8 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR1181403 | Other | lineage4.9 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR10796565 | Other | lineage4.9 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR7070223 | HR-TB | lineage3 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1180440 | Other | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR036207 | Other | lineage4.3;lineage4.9 | None | ERR4821143 | Other | lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR7070553 | Other | lineage3 | None | SRR6046839 | Other | lineage4.9 | None | SRR1173719 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR1735596 | RR-TB | lineage4.9 | None | ERR2229436 | Other | lineage4.8 | None | SRR3675565 | Other | lineage4 | None | ERR10796590 | Other | lineage4.9 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR11342669 | Other | lineage4.8 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR7131123 | Other | lineage4.8 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR3675552 | Other | lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | SRR7069518 | Other | lineage4.8 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR7069835 | Other | lineage2.2.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR7070320 | Other | lineage4.8 | None | ERR10796634 | Other | lineage4.7 | None | SRR7069784 | Other | lineage1.2.2.2 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR7070388 | Other | lineage3.1.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR978752 | Other | lineage4.8 | None | ERR867575 | Other | lineage4.9 | None | ERR10796559 | Other | lineage4.9 | None | ERR867555 | Other | lineage3 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR10796618 | Other | lineage4.3.4.1 | None | SRR1049672 | Other | lineage3 | None | ERR867574 | Other | lineage4.9 | None | SRR6045603 | Other | lineage4.1.1.3 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR7070535 | HR-TB | lineage4.1.2.1 | None | SRR7131121 | Other | lineage4.3.3 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7070521 | Other | lineage4.2.1.1 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | SRR7645927 | Other | lineage4.8 | None | DRR184982 | Other | lineage2.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR037504 | Other | lineage4.9.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR867567 | RR-TB | lineage3 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR2510804 | Other | lineage2.2.1 | None | ERR2513405 | Other | lineage2.2.1 | None | ERR10796623 | Other | lineage4.1.1.1 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR4818988 | Other | lineage1 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR9119120 | Other | lineage4.8 | None | ERR978748 | Other | lineage4.8 | None | DRR188816 | Sensitive | lineage4.2.2 | None | DRR184903 | Sensitive | lineage2.2.2 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR4769436 | Other | La1.3 | None | SRR15276982 | XDR-TB | lineage3 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR4812763 | Other | lineage2.2.1 | None | SRR3675389 | Other | lineage4.9 | None | SRR5818386 | Other | lineage4.9 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR7070293 | Other | lineage4.8 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4821704 | Other | lineage4.3.3 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR2432997 | Other | lineage4.8 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR4818050 | Sensitive | lineage4.6.2.2 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4814681 | Other | lineage2.2.1 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR4821811 | Sensitive | lineage4.9 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR4818126 | Other | lineage1 | None | ERR4829333 | Other | lineage4 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR5087596 | Other | La1.8.1 | None | SRR7069128 | Other | lineage1.2.1.2.1 | None | SRR7069193 | Other | lineage4.3.1.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR5979407 | Other | lineage3 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR4814930 | Other | lineage4.4.1.1 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4817189 | Other | lineage4.7 | None | ERR4796351 | Sensitive | lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR4819772 | Other | lineage1.1.3.1 | None | ERR978760 | RR-TB | lineage4.8 | None | ERR4820742 | Sensitive | lineage4.3.4.2.1 | None | ERR867572 | Other | lineage4.9 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR7070329 | Other | lineage3 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9787033 | Sensitive | lineage6 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | ERR10796617 | Other | lineage4.3.4.1 | None | SRR11349201 | MDR-TB | lineage4.1.1.3 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR12062542 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818464 | Other | lineage4.9 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR6046359 | Other | lineage4.7 | None | ERR867521 | MDR-TB | lineage2.2.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR867542 | HR-TB | lineage4.3 | None | SRR7070087 | Other | lineage4.8.1 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | SRR1196545 | Sensitive | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR7131145 | Other | lineage4.1.2.1 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR7131004 | Other | lineage4.6.2.2 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR10796583 | Other | lineage2.2.1 | None | ERR10796580 | Other | lineage4 | None | SRR11342646 | HR-TB | lineage3 | None | ERR10796593 | Other | lineage4.3 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR11349153 | RR-TB | lineage4.1.1.1 | None | SRR7069319 | Other | lineage4.5 | None | SRR18002875 | MDR-TB | lineage2.2.2;lineage4 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR9117788 | Other | lineage3 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | ERR2229366 | Other | lineage4.8 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002956 | Other | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002961 | Other | lineage2.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR6046376 | Other | lineage3 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR6397815 | Other | lineage4.4.1.1 | None | SRR1792025 | Other | La1.8.1 | None | SRR18002876 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | ERR4817294 | Other | lineage4.1.2 | None | SRR5007178 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR2027230 | Other | lineage4.2.2.2 | None | SRR21469200 | Other | La1.7.1 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR2228900 | Other | lineage4.8 | None | ERR978762 | Other | lineage4.8 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | SRR5818399 | Sensitive | lineage4.9 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2851359 | Other | lineage4.9 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR3324368 | RR-TB | lineage1.1.2 | None | SRR1173515 | Sensitive | lineage4.9 | None | ERR4769423 | Other | La1.3 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR4798769 | Other | lineage1.1.3.3 | None | SRR19303818 | Other | lineage4.3.4.2 | None | ERR4815502 | Other | lineage4.1 | None | ERR978693 | Other | lineage4.8 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR3468613 | Other | La1.8.1 | None | ERR4818691 | Other | lineage4.8 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR3806588 | Other | lineage6 | None | ERR5908124 | Other | lineage4.8 | None | ERR751345 | Other | lineage5.1.1 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR3675582 | Other | lineage4.9 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR7070479 | Other | lineage4.1.2 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | SRR3675509 | Other | lineage4.9 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | ERR4820030 | Other | lineage4.9 | None | SRR11342634 | MDR-TB | lineage4.8 | None | ERR10796596 | Other | lineage4.9 | None | SRR11342636 | MDR-TB | lineage4.3.3;lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SRR11349208 | MDR-TB | lineage2.2.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR11349193 | RR-TB | lineage4.1.2 | None | SRR7069137 | Other | lineage4.8 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | ERR3439489 | RR-TB | La1.8.1 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR6257067 | HR-TB | lineage4.2.1 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR19241806 | Sensitive | lineage4.1.2.1 | None | SRR19304104 | Other | lineage4.8 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR2100067 | Other | lineage4.3.3 | None | SRR21469201 | Other | La1.7.1 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819641 | Other | lineage4.6.2.2 | None | SRR18002926 | Other | lineage2.2.1 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18213726 | Other | lineage3 | None | SRR18003052 | Other | lineage2.2.1.1 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | ERR5311077 | Other | La1.8.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR6045591 | Other | lineage4.1.2.1 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6045778 | Other | lineage3.1 | None | SRR15315797 | RR-TB | lineage2.2.1;lineage4 | None | SRR6046616 | Other | lineage4.3.1.1 | None | ERR4829337 | Sensitive | lineage4.8 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002945 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18002997 | Other | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR2600422 | MDR-TB | lineage2.2.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR19303907 | Other | lineage4.8 | None | SRR19303876 | Other | lineage4.7 | None | SRR19303985 | Sensitive | lineage4.8 | None | SRR19304094 | Other | lineage6 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR3468488 | Other | La1.8.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR1002691 | HR-TB | lineage4.2.1 | None | SRR6044904 | Other | lineage3 | None | ERR3797062 | RR-TB | lineage4.9 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | ERR1023509 | Other | lineage4.9 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR6397733 | Other | lineage4.4.1.2 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971197 | MDR-TB | lineage4.4.1.1.1 | None | SRR9971200 | MDR-TB | lineage4.3.2 | None | SRR3675447 | Other | lineage3 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR10796568 | Other | lineage4.9 | None | ERR4814623 | Sensitive | lineage4.8 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175473 | Other | lineage4.9 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9971029 | MDR-TB | lineage2.2.2 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR10796578 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR18003033 | Other | lineage2.2.1 | None | ERR978746 | RR-TB | lineage4.8 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR978735 | Other | lineage4.8 | None | ERR10796631 | Other | lineage4.3.4.2;lineage4.9 | None | SRR7069091 | Other | lineage4.6.2 | None | SRR7070571 | Sensitive | lineage3 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR7069648 | Other | lineage4.6.2.2 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR7645899 | Other | lineage2.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR1180446 | Other | lineage4.9 | None | SRR7755657 | Other | lineage4.8 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6046020 | Other | lineage3 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6046442 | Other | lineage3 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR6397640 | Other | lineage4.2.1.1 | None | SRR6824572 | MDR-TB | lineage2.2.1 | None | SRR9971223 | Other | lineage2.2.1 | None | SRR4033549 | Other | lineage2.2.2 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR7070154 | Other | lineage4.4.1.1 | None | SRR1184329 | Other | lineage4.9 | None | ERR10796553 | Other | lineage4.9 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None |
|---|
