ERR2512841
|
HR-TB
|
lineage2.2.1
|
gb
|
ERR10796580
|
Other
|
lineage4
|
None
|
SRR11342698
|
RR-TB
|
lineage4.4.1.1
|
None
|
ERR10796593
|
Other
|
lineage4.3
|
None
|
ERR3276170
|
Other
|
lineage4.1.2.1
|
nl
|
SRR6045290
|
RR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR978767
|
RR-TB
|
lineage4.8
|
None
|
ERR2229366
|
Other
|
lineage4.8
|
None
|
SRR18213726
|
Other
|
lineage3
|
None
|
ERR5311077
|
Other
|
La1.8.1
|
None
|
ERR4818988
|
Other
|
lineage1.2.2
|
None
|
ERR4813263
|
MDR-TB
|
lineage4.8
|
None
|
ERR978766
|
RR-TB
|
lineage4.8
|
None
|
ERR2446154
|
Sensitive
|
lineage4.4.1.1
|
nl
|
ERR978767_ERR978765_ERR978766
|
RR-TB
|
lineage4.8
|
None
|
SAMN02380982
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR3797062
|
RR-TB
|
lineage4.9
|
None
|
ERR2228900
|
Other
|
lineage4.8
|
None
|
SRR5007168
|
Other
|
lineage4.8.2;lineage4.9
|
None
|
ERR4820410
|
RR-TB
|
lineage3.1.1
|
None
|
SRR6044904
|
Other
|
lineage3
|
None
|
ERR9285979
|
RR-TB
|
lineage3.1.1
|
None
|
SRR18002935
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR9971065
|
RR-TB
|
lineage2.2.1
|
None
|
SRR1173740
|
Other
|
lineage3;lineage4
|
None
|
ERR10796568
|
Other
|
lineage4.9
|
None
|
ERR10762248
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR4814623
|
Sensitive
|
lineage4.8
|
None
|
SRR11349201
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR14801652
|
HR-TB
|
lineage4.3.3
|
None
|
ERR3275615
|
Sensitive
|
lineage4.4.1.1
|
nl
|
SRR18002875
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR18002961
|
Other
|
lineage2.2.1
|
None
|
SRR18002964
|
Other
|
lineage2.2.1
|
None
|
ERR3797065
|
RR-TB
|
lineage4.9
|
None
|
SRR11342676
|
HR-TB
|
lineage4.6.2.2
|
None
|
ERR4818407
|
Other
|
lineage4.3.2
|
None
|
ERR502470
|
RR-TB
|
lineage4.9
|
None
|
ERR2432997
|
Other
|
lineage4.8
|
None
|
SRR1173185
|
Other
|
lineage4.9
|
None
|
ERR978726_ERR978727
|
RR-TB
|
lineage4.8
|
None
|
ERR2509886
|
Other
|
lineage3
|
None
|
SRR7069074
|
Other
|
lineage3
|
None
|
SRR1062871
|
RR-TB
|
lineage4.3.4.2.1
|
None
|
SRR1196478
|
Other
|
lineage4.9
|
None
|
SRR6785281
|
Other
|
lineage4.2.1.1
|
None
|
SRR18002998
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR6045621
|
Other
|
lineage4.1.1.3
|
None
|
SRR1792012
|
Other
|
La1.8.1
|
None
|
SRR9971029
|
MDR-TB
|
lineage2.2.2
|
None
|
ERR4821054
|
Sensitive
|
lineage3
|
None
|
ERR1034647
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR9117760
|
HR-TB
|
lineage4.3
|
None
|
ERR3324368
|
RR-TB
|
lineage1.1.2;lineage6.2.3
|
None
|
ERR9992784
|
XDR-TB
|
lineage2.2.2
|
None
|
ERR4819166
|
Other
|
lineage3
|
gb
|
SAMEA3501052
|
RR-TB
|
lineage4.8
|
None
|
ERR10796636
|
Other
|
lineage4.1.2.1
|
None
|
SRR6046442
|
Other
|
lineage3
|
None
|
SRR7070157
|
Other
|
lineage4.1.1.3.1
|
None
|
SRR1735598
|
RR-TB
|
lineage4.9
|
None
|
ERR4817069
|
RR-TB
|
|
None
|
SRR7070134
|
Other
|
lineage3.1.1
|
None
|
SRR11349207
|
RR-TB
|
lineage2.2.1
|
None
|
SRR9971046
|
MDR-TB
|
lineage4.8
|
None
|
SRR9971122
|
MDR-TB
|
lineage4.8
|
None
|
SRR1049559
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR5917985
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5979407
|
Other
|
lineage3
|
None
|
SRR13423546
|
Other
|
lineage4.4.2
|
None
|
SRR5341365
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR6046729
|
Other
|
lineage3
|
None
|
ERR10796555
|
Other
|
lineage4.1.2.1
|
None
|
ERR10796629
|
Other
|
lineage4.1;lineage4.9
|
None
|
ERR978734
|
RR-TB
|
lineage4.8
|
None
|
SRR12062533
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR12634609
|
MDR-TB
|
lineage3.1.1
|
None
|
SRR18003002
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR2100067
|
Other
|
lineage4.3.3
|
None
|
SRR9971372
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR017781
|
Other
|
lineage3
|
None
|
ERR038289
|
Other
|
lineage4.3.3
|
None
|
SRR5818388
|
Other
|
lineage4.9
|
None
|
ERR10796599
|
Other
|
lineage4.8
|
None
|
SRR15508556
|
Other
|
lineage4.3.4.1
|
None
|
SRR16156804
|
Sensitive
|
lineage4.9
|
None
|
SRR11342648
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR11342693
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR6398013
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR18002887
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR18002981
|
Other
|
lineage2.2.1
|
None
|
SRR22424778
|
RR-TB
|
lineage2.2.1.1
|
None
|
SRR6046343
|
Other
|
lineage2.2.1
|
None
|
ERR867570
|
RR-TB
|
lineage4.9
|
None
|
ERR10796592
|
Other
|
lineage4.9
|
None
|
SRR023487
|
RR-TB
|
lineage2.2.1
|
None
|
SRR1140736
|
Other
|
lineage4.1.2.1
|
None
|
SRR5007178
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
SRR10315465
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1049677
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
SRR1173170
|
Other
|
lineage4.9
|
None
|
SRR11342662
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR1140712
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR1175472
|
RR-TB
|
lineage4.3.4.1
|
None
|
ERR4816856
|
Other
|
lineage4.1.2.1
|
None
|
SRR9971223
|
Other
|
lineage2.2.1
|
None
|
ERR10796560
|
Other
|
lineage4.9
|
None
|
SRR3675261
|
Other
|
lineage1.2.1.1
|
None
|
ERR978750
|
RR-TB
|
lineage4.8
|
None
|
ERR4024582
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR4820151
|
Other
|
lineage4.8
|
None
|
SRR7755657
|
Other
|
lineage4.8
|
None
|
SRR6397733
|
Other
|
lineage4.4.1.2
|
None
|
SRR9971114
|
Other
|
lineage2.2.1
|
None
|
SRR5007161
|
RR-TB
|
lineage4.1.1.3.1;lineage4.9
|
None
|
ERR978755
|
RR-TB
|
lineage4.8
|
None
|
SRR10993951
|
RR-TB
|
La1.6
|
None
|
SRR1181403
|
Other
|
lineage4.9
|
None
|
ERR2027209
|
MDR-TB
|
lineage1.2.1.1
|
None
|
ERR10796565
|
Other
|
lineage4.9
|
None
|
SRR18003004
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR18003009
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7070223
|
HR-TB
|
lineage3
|
None
|
SRR18002891
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11342658
|
RR-TB
|
lineage4.1.2
|
None
|
SRR11342668
|
Pre-XDR-TB
|
lineage4.8.1
|
None
|
SRR1049673
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR11349191
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR10315556
|
Sensitive
|
lineage2.2.1
|
None
|
SRR7069931
|
Other
|
lineage4.2.2.2
|
None
|
ERR4816610
|
Other
|
lineage4.3.3
|
None
|
ERR4809333
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR4815121
|
HR-TB
|
lineage4.6.2.2
|
None
|
ERR036207
|
Other
|
lineage4.3;lineage4.9
|
None
|
ERR4821143
|
Other
|
lineage4.9
|
None
|
SRR1140574
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
SRR18003013
|
Pre-XDR-TB
|
lineage4.4.2
|
None
|
ERR867524
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
SRR7645977
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR19303820
|
RR-TB
|
lineage4.8
|
None
|
SRR21469200
|
Other
|
La1.7.1
|
None
|
ERR978694_ERR978693
|
Other
|
lineage4.8
|
None
|
SRR6046852
|
MDR-TB
|
lineage3
|
None
|
SRR3675265
|
Other
|
lineage4
|
None
|
ERR2229436
|
Other
|
lineage4.8
|
None
|
SRR3675565
|
Other
|
lineage4
|
None
|
SRR1140753
|
RR-TB
|
lineage4.3.4.2.1
|
None
|
SRR18003019
|
Other
|
lineage2.2.1
|
None
|
SRR22424765
|
HR-TB
|
lineage4.8
|
None
|
ERR9119733
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8774355
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10796564
|
Other
|
lineage4.3.3
|
None
|
ERR978726
|
RR-TB
|
lineage4.8
|
None
|
SRR5007167
|
RR-TB
|
lineage4.1.1.3.1
|
None
|
SRR6045071
|
Other
|
lineage4.3.1.1
|
None
|
SRR7755655
|
Other
|
lineage4.1.2.1
|
None
|
SRR15316595
|
RR-TB
|
lineage4.4.2
|
None
|
SRR9970980
|
HR-TB
|
lineage4.1.2
|
None
|
SRR7131229
|
Other
|
lineage4.1.2.1
|
None
|
ERR10796626
|
Other
|
lineage4.1.2.1
|
None
|
SRR6824501
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR7131123
|
Other
|
lineage4.8
|
None
|
SRR6046117
|
Other
|
lineage4.9
|
None
|
ERR10796571
|
Other
|
lineage4.9
|
None
|
ERR10796589
|
Other
|
lineage4.9
|
None
|
ERR3806588
|
Other
|
lineage6.1.3
|
None
|
SRR7070320
|
Other
|
lineage4.8
|
None
|
ERR4821119
|
Other
|
lineage4.4.1.1
|
None
|
SRR7070388
|
Other
|
lineage3.1.2
|
None
|
SRR11342687
|
RR-TB
|
lineage4.2.2.2
|
None
|
ERR4872322
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR10315707
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR978752
|
Other
|
lineage4.8
|
None
|
SRR7070469
|
Other
|
lineage4.3.1.1
|
None
|
SRR7069319
|
Other
|
lineage4.5
|
None
|
ERR4819641
|
Other
|
lineage4.6.2.2
|
None
|
SRR11349203
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR7535047
|
RR-TB
|
lineage4.6.1.1
|
None
|
ERR3468488
|
Other
|
La1.8.1
|
None
|
SRR1002691
|
HR-TB
|
lineage4.2.1
|
None
|
SRR11342685
|
HR-TB
|
lineage4.4.1.1
|
None
|
ERR9119120
|
Other
|
lineage4.8
|
None
|
SRR14334194
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR867522
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR11342638
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR7070571
|
Sensitive
|
lineage3
|
None
|
SRR3675449
|
Other
|
M.canetti;lineage4.9
|
None
|
ERR2513910
|
Sensitive
|
lineage3
|
gb
|
ERR126597
|
HR-TB
|
lineage4.4.1.2
|
None
|
ERR2886463
|
Sensitive
|
lineage2.2.1
|
None
|
SRR16156697
|
RR-TB
|
lineage2.2.1
|
None
|
SRR11349153
|
RR-TB
|
lineage4.1.1.1
|
None
|
SRR1184329
|
Other
|
lineage4.9
|
None
|
ERR10796553
|
Other
|
lineage4.9
|
None
|
SRR18002980
|
Other
|
lineage2.2.1
|
None
|
SRR18003032
|
Other
|
lineage2.2.1
|
None
|
ERR978734_ERR978733_ERR978735
|
RR-TB
|
lineage4.8
|
None
|
ERR978746
|
RR-TB
|
lineage4.8
|
None
|
ERR4819324
|
Other
|
lineage4.8
|
gb
|
SRR18003052
|
Other
|
lineage2.2.1.1
|
None
|
SRR8758877
|
MDR-TB
|
lineage4.1.1.1
|
None
|
DRR188816
|
Sensitive
|
lineage4.2.2
|
None
|
ERR4817294
|
Other
|
lineage4.1.2
|
None
|
ERR4819011
|
Other
|
lineage3.1.2.1
|
None
|
ERR037504
|
Other
|
lineage4.9.1
|
None
|
ERR4814617
|
Other
|
lineage1.1.3.1
|
None
|
SRR1792022
|
Other
|
La1.8.1
|
None
|
ERR2514351
|
Sensitive
|
lineage3
|
gb
|
SRR3675527
|
Other
|
lineage4.9
|
None
|
ERR1023502
|
MDR-TB
|
lineage2;lineage4
|
None
|
SRR6045422
|
Other
|
lineage4.3.1.1
|
None
|
SRR7645972
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR18002908
|
Other
|
lineage2.2.1
|
None
|
ERR4815502
|
Other
|
lineage4.1
|
None
|
SRR21469202
|
Other
|
La1.7.1
|
None
|
SRR7069027
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR867525
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR212114
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR867573
|
Other
|
lineage4.9
|
None
|
ERR3283006
|
RR-TB
|
lineage4.9
|
None
|
SRR9971168
|
Other
|
lineage4.3.2.1
|
None
|
SRR1792011
|
Other
|
La1.8.1
|
None
|
ERR10796566
|
Other
|
lineage4.9
|
None
|
ERR4819863
|
RR-TB
|
lineage4.9
|
None
|
ERR978754
|
RR-TB
|
lineage4.8
|
None
|
SAMEA3501070
|
RR-TB
|
lineage4.8
|
None
|
ERR4818507
|
Other
|
lineage4.1.2.1
|
None
|
SRR18002987
|
Other
|
lineage2.2.1
|
None
|
ERR4820891
|
Sensitive
|
lineage4.9
|
gb
|
ERR10796576
|
Sensitive
|
lineage4.9
|
None
|
ERR10796577
|
Other
|
lineage4.9
|
None
|
SRR7070144
|
Other
|
lineage4.8
|
None
|
SRR19241806
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR18002872
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR7131216
|
Other
|
lineage4.1.2.1
|
None
|
ERR4818851
|
RR-TB
|
lineage4.4.1.1
|
None
|
ERR867521
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1173281
|
Other
|
lineage3
|
None
|
SRR18003024
|
RR-TB
|
lineage2.2.1
|
None
|
SRR1181256
|
Other
|
lineage4.9
|
None
|
SRR18002956
|
Other
|
lineage2.2.1
|
None
|
SRR18003045
|
Other
|
lineage2.2.1
|
None
|
SRR19303907
|
Other
|
lineage4.8
|
None
|
SRR7070195
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR1049726
|
Other
|
lineage4.1.2.1;lineage4.4.1.1
|
None
|
ERR2513405
|
Other
|
lineage2.2.1
|
None
|
SRR6045002
|
RR-TB
|
lineage4.9
|
None
|
SRR6045909
|
Other
|
lineage4.8.1
|
None
|
SRR7069839
|
Other
|
lineage4.8
|
None
|
SRR6045778
|
Other
|
lineage3.1
|
None
|
SRR7646018
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR1049725
|
Other
|
lineage4.1.2.1;lineage4.4.1
|
None
|
ERR4817915
|
Other
|
lineage4.9
|
None
|
ERR4818897
|
Other
|
lineage4.1.2.1
|
gb
|
SRR12062493
|
Pre-XDR-TB
|
lineage4.4.2
|
None
|
ERR323044
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
SRR5163959
|
Other
|
lineage4.9
|
None
|
ERR10796591
|
Other
|
lineage4.9
|
None
|
SRR18002947
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18213736
|
Other
|
lineage3
|
None
|
ERR4814911
|
Other
|
lineage4.3.3
|
None
|
ERR4821214
|
Other
|
lineage1.2.1.2.1
|
None
|
ERR10762275
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR10762495
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11349147
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR1140716
|
Other
|
lineage3
|
None
|
SAMEA3501063
|
RR-TB
|
lineage4.8
|
None
|
SRR14782539
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR7645928
|
Other
|
lineage4.7
|
None
|
ERR2513082
|
Other
|
lineage4.1.2.1
|
gb
|
SRR7068912
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1049560
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR7131149
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR2851354
|
Other
|
lineage4.9
|
None
|
SRR7069033
|
Sensitive
|
lineage4.2.1
|
None
|
ERR3283046
|
Sensitive
|
lineage4.9
|
None
|
SRR7645906
|
Other
|
lineage2.2.1
|
None
|
SRR5007204
|
Other
|
lineage4.1.2.1
|
None
|
SRR6045424
|
Other
|
lineage1.1.2
|
None
|
ERR4808964
|
RR-TB
|
lineage2.2.1
|
None
|
SRR22048536
|
Other
|
lineage4.3.3
|
None
|
ERR4818646
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR10315464
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR2513450
|
Other
|
lineage1.2.1.2.1
|
gb
|
SRR15315797
|
RR-TB
|
lineage2.2.1
|
None
|
ERR867542
|
HR-TB
|
lineage4.2.1.1;lineage4.3.3
|
None
|
SRR18003015
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7069347
|
Other
|
lineage4.1.2.1
|
None
|
SRR11342684
|
HR-TB
|
lineage4.4.1.1
|
None
|
SRR10315558
|
Sensitive
|
lineage2.2.1
|
None
|
ERR10219876
|
Other
|
lineage4.3.4.2
|
None
|
ERR4819772
|
Other
|
lineage1.1.3.1
|
None
|
ERR4819948
|
Other
|
lineage4.4.1.1
|
None
|
SRR1049676
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
ERR4816310
|
HR-TB
|
lineage4.6.1.2
|
None
|
SRR11342640
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1792025
|
Other
|
La1.8.1
|
None
|
SRR1180440
|
Other
|
lineage4.9
|
None
|
SRR11342649
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR3619764
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6046440
|
Other
|
lineage3.1.2.2
|
None
|
ERR502481
|
RR-TB
|
lineage4.9
|
None
|
SRR21727760
|
Other
|
lineage2.2.1
|
None
|
SRR14801325
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
SRR7070553
|
Other
|
lineage3
|
None
|
ERR4820720
|
Other
|
lineage4.1.2.1
|
None
|
SRR1173719
|
Other
|
lineage4.9
|
None
|
SRR1735596
|
RR-TB
|
lineage4.9
|
None
|
ERR3283033
|
Sensitive
|
lineage4.9
|
None
|
ERR10796590
|
Other
|
lineage4.9
|
None
|
ERR10796640
|
Other
|
lineage4.1.2.1
|
None
|
SRR18002933
|
Other
|
lineage2.2.1
|
None
|
SRR11342669
|
Other
|
lineage4.8
|
None
|
SRR22175249
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18002876
|
MDR-TB
|
lineage2.2.1;lineage2.2.2
|
None
|
SRR3675552
|
Other
|
lineage4.9
|
None
|
SRR7069518
|
Other
|
lineage4.8
|
None
|
ERR10796634
|
Other
|
lineage4.7
|
None
|
SRR6397640
|
Other
|
lineage4.2.1.1
|
None
|
ERR4457829
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR4815923
|
Sensitive
|
lineage4.8
|
None
|
ERR867575
|
Other
|
lineage4.9
|
None
|
ERR4818050
|
Sensitive
|
lineage4.6.2.2
|
None
|
ERR10796581
|
Other
|
lineage4.1.2
|
None
|
SRR11342642
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR2027257
|
Other
|
lineage4.1.2.1
|
None
|
SRR7070446
|
Other
|
lineage3
|
None
|
SRR7069946
|
Other
|
lineage4.8
|
None
|
SRR16156832
|
RR-TB
|
lineage2.2;lineage4
|
None
|
ERR4820736
|
Sensitive
|
lineage4.1.2.1
|
gb
|
SRR10869071
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR19303817
|
Other
|
lineage2.2.1
|
None
|
ERR10796583
|
Other
|
lineage2.2.1
|
None
|
SRR18002881
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18002909
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4817189
|
Other
|
lineage4.7
|
None
|
ERR4819528
|
RR-TB
|
lineage3
|
None
|
ERR4829337
|
Sensitive
|
lineage4.8
|
None
|
SRR6046848
|
Other
|
lineage4.6.5
|
None
|
ERR2600422
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2027230
|
Other
|
lineage4.2.2.2
|
None
|
ERR2027255
|
HR-TB
|
lineage4.4.1.1
|
None
|
SRR11342644
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR1023509
|
Other
|
lineage4.9
|
None
|
ERR10796631
|
Other
|
lineage4.3.4.2;lineage4.9
|
None
|
SRR7069091
|
Other
|
lineage4.6.2
|
None
|
SRR11342696
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR7069648
|
Other
|
lineage4.6.2.2
|
None
|
SRR1180446
|
Other
|
lineage4.9
|
None
|
SRR3619841
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4814930
|
Other
|
lineage4.4.1.1
|
None
|
ERR10796578
|
Other
|
lineage2.2.1
|
None
|
SRR4033549
|
Other
|
lineage2.2.2
|
None
|
SRR18002994
|
MDR-TB
|
lineage4.2.2
|
None
|
DRR184903
|
Sensitive
|
lineage2.2.2
|
None
|
SRR7070154
|
Other
|
lineage4.4.1.1
|
None
|
ERR752012
|
HR-TB
|
lineage1.1.1.1
|
None
|
SRR6824572
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11342647
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR18003033
|
Other
|
lineage2.2.1
|
None
|
SRR18002999
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8975044
|
Other
|
lineage4.1.1.2
|
None
|
ERR978735
|
Other
|
lineage4.8
|
None
|
ERR4818691
|
Other
|
lineage4.8
|
None
|
SRR1062928
|
Other
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR4819383
|
RR-TB
|
lineage4.9
|
None
|
ERR502517
|
Other
|
lineage5.1.1
|
None
|
ERR9992879
|
XDR-TB
|
lineage4.3.3
|
None
|
ERR867571
|
Other
|
lineage4.9
|
None
|
SRR9971112
|
Other
|
lineage2.2.1
|
None
|
SRR6045384
|
Other
|
lineage4.1.2.1
|
None
|
ERR10796598
|
Other
|
lineage4.9
|
None
|
ERR2510804
|
Other
|
lineage2.2.1
|
None
|
SRR7070602
|
Other
|
lineage4.2.1
|
None
|
SRR7131122
|
Other
|
lineage2.2.1
|
None
|
SRR7131195
|
Other
|
lineage2.2.1
|
None
|
SRR1062918
|
Other
|
lineage3
|
None
|
SRR11342655
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5979454
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR4821167
|
Sensitive
|
lineage4.8
|
gb
|
SRR11342664
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR19303899
|
Other
|
lineage3
|
None
|
SAMEA3501046
|
RR-TB
|
lineage4.8
|
None
|
ERR4821761
|
Other
|
lineage3
|
gb
|
SRR18003023
|
Other
|
lineage2.2.1
|
None
|
ERR10762297
|
MDR-TB
|
lineage4.2.1
|
None
|
SAMEA3501067
|
RR-TB
|
lineage4.8
|
None
|
SRR1049582
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR7645971
|
Other
|
lineage2.2.1
|
None
|
SRR11342695
|
MDR-TB
|
lineage4.8
|
None
|
ERR978757
|
RR-TB
|
lineage4.8
|
None
|
SRR6046291
|
Other
|
lineage3
|
None
|
ERR2229148
|
Other
|
lineage4.8
|
dk
|
SRR1173770
|
Other
|
lineage4.9
|
None
|
ERR3275996
|
HR-TB
|
lineage4.3.4.1
|
nl
|
SRR9971197
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR9971333
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR10796635
|
Other
|
lineage4.8
|
None
|
SRR11342646
|
HR-TB
|
lineage3
|
None
|
SRR1175491
|
MDR-TB
|
lineage4.3.4.1
|
None
|
SRR7755649
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR4818977
|
Other
|
lineage4.1.2.1
|
None
|
SRR11342671
|
RR-TB
|
lineage4.1.3
|
None
|
SRR11342673
|
RR-TB
|
lineage4.3.4.2
|
None
|
SRR17567917
|
RR-TB
|
lineage4.4.1.1
|
None
|
ERR4811101
|
Other
|
lineage4.4.2
|
None
|
SRR1173310
|
Other
|
lineage3.1.1
|
None
|
SRR1175474
|
Other
|
lineage4.9
|
None
|
SRR6044952
|
Other
|
lineage4.9
|
None
|
SRR12708406
|
HR-TB
|
lineage2.2.1;lineage4.9
|
None
|
SRR18911231
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR7131061
|
Other
|
lineage2.2.1
|
None
|
ERR867544
|
Other
|
lineage4.9
|
None
|
ERR10796627
|
Other
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR10315693
|
RR-TB
|
lineage4.1.2
|
None
|
ERR4816745
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4817398
|
Other
|
lineage3.1.1
|
None
|
ERR4829328
|
Other
|
lineage2.2.1
|
None
|
SRR7069097
|
Other
|
lineage3.1.2.1
|
None
|
SRR7069314
|
Other
|
lineage3
|
None
|
SRR18003030
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4769472
|
Other
|
lineage4.9
|
None
|
ERR4821286
|
Other
|
lineage4.8
|
None
|
ERR10796561
|
Other
|
lineage4.3.2
|
None
|
SRR18002930
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2600561
|
Other
|
lineage2.2.1;lineage4.8
|
None
|
ERR4596944
|
MDR-TB
|
lineage3.1.1
|
None
|
SRR18002874
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6044936
|
Other
|
lineage4.6
|
None
|
ERR978733
|
RR-TB
|
lineage4.8
|
None
|
SRR6046275
|
Other
|
lineage3.1.1;lineage4
|
None
|
SRR7069922
|
Other
|
lineage2.2.1
|
None
|
ERR978746_ERR978747_ERR978748
|
RR-TB
|
lineage4.8
|
None
|
ERR9117812
|
Other
|
lineage4.3.1.1
|
None
|
ERR4822261
|
RR-TB
|
lineage2.2.1
|
None
|
ERR867527
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR978765
|
RR-TB
|
lineage4.8
|
None
|
SRR9971200
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR9971041
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR867568
|
Other
|
lineage2.2.1;lineage4
|
None
|
ERR2600562
|
MDR-TB
|
lineage2.2.1;lineage4.8
|
None
|
ERR4819198
|
Other
|
lineage2.2.1
|
None
|
SRR11349193
|
RR-TB
|
lineage4.1.2
|
None
|
SRR18002941
|
RR-TB
|
lineage2.2.1
|
None
|
ERR4812495
|
Other
|
lineage4.1.2.1
|
pe
|
ERR4820742
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR18003042
|
Other
|
lineage2.2.1
|
None
|
ERR4816800
|
Other
|
lineage4.8
|
gb
|
ERR4819017
|
Other
|
lineage3
|
None
|
ERR502474
|
RR-TB
|
lineage4.9
|
None
|
SRR6046839
|
Other
|
lineage4.9
|
None
|
SRR18002974
|
Other
|
lineage2.2.1
|
None
|
ERR751345
|
Other
|
lineage5.1.1
|
None
|
ERR9117827
|
Other
|
lineage1.2.2.2
|
None
|
ERR4769554
|
RR-TB
|
lineage4.9
|
None
|
ERR10796628
|
Other
|
lineage4.3.3
|
None
|
ERR2513830
|
RR-TB
|
lineage4.8
|
None
|
ERR5162090
|
RR-TB
|
lineage4.9
|
None
|
SRR11972425
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6046616
|
Other
|
lineage4.3.1.1
|
None
|
DRR184982
|
Other
|
lineage2.2.1
|
None
|
SRR6982239
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR6046210
|
Other
|
lineage4.9
|
None
|
SRR6045957
|
Other
|
lineage4.9
|
None
|
ERR6866241
|
Other
|
lineage4.3.2
|
None
|
ERR7801175
|
HR-TB
|
lineage4.6.5
|
None
|
SRR7069800
|
Other
|
lineage3.1.2.1
|
None
|
SAMEA3501073
|
RR-TB
|
lineage4.8
|
None
|
ERR4821172
|
RR-TB
|
lineage4.9
|
None
|
SRR7645899
|
Other
|
lineage2.2.1
|
None
|
ERR10796633
|
Other
|
lineage4.3.4.2
|
None
|
SRR7069835
|
Other
|
lineage2.2.1
|
None
|
ERR7801176
|
RR-TB
|
lineage4.6.5
|
None
|
SRR7069784
|
Other
|
lineage1.2.2.2
|
None
|
SRR1173385
|
Sensitive
|
lineage4.9
|
None
|
SRR18909918
|
Other
|
lineage2.2.1.1
|
None
|
SRR3618864
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SAMEA3501015
|
Other
|
lineage4.8
|
None
|
ERR867526
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR867538
|
Other
|
lineage4.2.2.2
|
None
|
SRR7070369
|
Other
|
lineage1.2.2.2
|
None
|
SRR1049672
|
Other
|
lineage3
|
None
|
SRR19304115
|
Other
|
lineage4.1.2.1
|
None
|
SRR11342682
|
Other
|
lineage4.1.2
|
None
|
SRR7755645
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR987707
|
MDR-TB
|
lineage4.7
|
None
|
SRR7070535
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR7070521
|
Other
|
lineage4.2.1.1
|
None
|
ERR4596904
|
MDR-TB
|
lineage3.1.1
|
None
|
ERR9787033
|
Sensitive
|
lineage6.1.2
|
None
|
ERR978762
|
Other
|
lineage4.8
|
None
|
SRR18002976
|
Other
|
lineage2.2.1
|
None
|
SRR11342691
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10796623
|
Other
|
lineage4.1.1.1
|
None
|
SRR11342686
|
MDR-TB
|
lineage4.8
|
None
|
SRR3675230
|
Other
|
lineage3;lineage4
|
None
|
SRR11972417
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR970449
|
RR-TB
|
lineage4.1.1.3
|
None
|
SRR11342660
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5818386
|
Other
|
lineage4.9
|
None
|
SRR7070293
|
Other
|
lineage4.8
|
None
|
SRR21469201
|
Other
|
La1.7.1
|
None
|
ERR4972567
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR7069193
|
Other
|
lineage4.3.1.1
|
None
|
SRR10315567
|
HR-TB
|
lineage2.2.1
|
None
|
ERR502473
|
RR-TB
|
lineage4.9
|
None
|
ERR502478
|
RR-TB
|
lineage4.9
|
None
|
SRR1184308
|
Sensitive
|
lineage4.9
|
None
|
SRR19303876
|
Other
|
lineage4.7
|
None
|
SRR11349208
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18002903
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR867540
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4812763
|
Other
|
lineage2.2.1
|
None
|
SRR5818586
|
RR-TB
|
lineage4.2.2.2
|
None
|
SRR12062542
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18003012
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6046376
|
Other
|
lineage3
|
None
|
ERR3439489
|
RR-TB
|
La1.8.1
|
None
|
ERR171142
|
Other
|
lineage3.1.1;lineage4.9
|
None
|
ERR5987263
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11342643
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4829333
|
Other
|
lineage4
|
None
|
SRR6257067
|
HR-TB
|
lineage4.2.1
|
None
|
SRR18002963
|
Other
|
lineage2.2.1
|
None
|
ERR10796620
|
Other
|
lineage4.1.1.1
|
None
|
SRR6045267
|
RR-TB
|
lineage4.8
|
None
|
SRR5007169
|
RR-TB
|
lineage4.8.2
|
None
|
ERR108125
|
RR-TB
|
lineage4.9
|
None
|
ERR867574
|
Other
|
lineage4.9
|
None
|
SRR6045603
|
Other
|
lineage4.1.1.3
|
None
|
ERR978761_ERR978762_ERR978760
|
RR-TB
|
lineage4.8
|
None
|
SRR19303796
|
Other
|
lineage4.3.3
|
None
|
SRR7645927
|
Other
|
lineage4.8
|
None
|
SRR10315579
|
Other
|
lineage2.2.1.1
|
None
|
ERR867567
|
RR-TB
|
lineage3
|
None
|
SRR18002997
|
Other
|
lineage2.2.1
|
None
|
ERR4816531
|
Other
|
lineage4.1.2
|
None
|
ERR978750_ERR978752_ERR978751
|
RR-TB
|
lineage4.8
|
None
|
SRR18002937
|
Other
|
lineage2.2.1
|
None
|
SRR5818647
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR2851359
|
Other
|
lineage4.9
|
None
|
ERR2513298
|
Sensitive
|
lineage4.8
|
gb
|
SRR3675461
|
RR-TB
|
lineage4.9
|
None
|
SRR3675389
|
Other
|
lineage4.9
|
None
|
ERR4821704
|
Other
|
lineage4.3.3
|
None
|
ERR3797063
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR4821811
|
Sensitive
|
lineage4.9
|
None
|
SRR7069128
|
Other
|
lineage1.2.1.2.1
|
None
|
SAMN02380990
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR4818570
|
Other
|
lineage4.3.3
|
None
|
SRR3675582
|
Other
|
lineage4.9
|
None
|
ERR2027290
|
Other
|
lineage3.1.2.1;lineage4.9
|
None
|
SRR6046484
|
Other
|
lineage1.2.2.2
|
None
|
ERR4822150
|
Other
|
lineage4.8
|
gb
|
SRR6044958
|
Other
|
lineage4.4.1.1
|
None
|
SRR6789624
|
HR-TB
|
lineage4.1.1.3
|
None
|
ERR867572
|
Other
|
lineage4.9
|
None
|
SRR7070329
|
Other
|
lineage3
|
None
|
ERR867523
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4820030
|
Other
|
lineage4.9
|
None
|
SRR5818464
|
Other
|
lineage4.9
|
None
|
SRR6397815
|
Other
|
lineage4.4.1.1
|
None
|
DRR184629
|
Other
|
lineage2.2.1
|
None
|
SRR7069137
|
Other
|
lineage4.8
|
None
|
ERR4769436
|
Other
|
La1.3
|
None
|
ERR10796558
|
Sensitive
|
lineage4.3.4.1;lineage4.9
|
None
|
SRR7131004
|
Other
|
lineage4.6.2.2
|
None
|
SRR5007193
|
RR-TB
|
lineage4.1.1.3.1
|
None
|
SRR1062920
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
ERR10796559
|
Other
|
lineage4.9
|
None
|
ERR2514943
|
Sensitive
|
lineage4.8
|
gb
|
ERR4769423
|
Other
|
La1.3
|
None
|
ERR867555
|
Other
|
lineage3
|
None
|
SRR19303985
|
Sensitive
|
lineage4.8
|
None
|
ERR4819579
|
HR-TB
|
lineage4.3.3
|
None
|
ERR5908124
|
Other
|
lineage4.8
|
None
|
ERR3275941
|
RR-TB
|
lineage4.3
|
nl
|
SRR3675225
|
Other
|
lineage2.2.1.2
|
None
|
ERR4819002
|
HR-TB
|
lineage4.8
|
None
|
ERR10796618
|
Other
|
lineage4.3.4.1
|
None
|
SRR3601585
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR7131121
|
Other
|
lineage4.3.3
|
None
|
SRR7131147
|
Other
|
lineage4.1.2.1
|
None
|
SRR7755688
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
SRR7131230
|
HR-TB
|
lineage4.3.4.2
|
None
|
SAMEA3501065
|
RR-TB
|
lineage4.8
|
None
|
SRR18002984
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR5818399
|
Sensitive
|
lineage4.9
|
None
|
ERR2229198
|
Sensitive
|
lineage4.8
|
None
|
SRR19304094
|
Other
|
lineage6.1.2
|
None
|
SRR16627752
|
RR-TB
|
lineage4.4
|
None
|
SRR11342651
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR978748
|
Other
|
lineage4.8
|
None
|
SRR10315751
|
MDR-TB
|
lineage4.8
|
None
|
ERR978755_ERR978756_ERR978754_ERR978757
|
RR-TB
|
lineage4.8
|
None
|
SRR1062880
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR5087596
|
Other
|
La1.8.1
|
None
|
SRR1173515
|
Sensitive
|
lineage4.9
|
None
|
ERR10796563
|
Other
|
lineage4.3.3
|
None
|
ERR4818126
|
Other
|
lineage1.2.2
|
None
|
SRR15276982
|
XDR-TB
|
lineage3
|
None
|
SRR19303818
|
Other
|
lineage4.3.4.2
|
None
|
ERR867554
|
Other
|
lineage4.3.4.1
|
None
|
SRR6045591
|
Other
|
lineage4.1.2.1
|
None
|
SRR6045516
|
Other
|
lineage3.1.1
|
None
|
SRR6046020
|
Other
|
lineage3
|
None
|
ERR502479
|
RR-TB
|
lineage4.9
|
None
|
SRR6046482
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
SRR19304104
|
Other
|
lineage4.8
|
None
|
ERR4819706
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR978693
|
Other
|
lineage4.8
|
None
|
ERR3468613
|
Other
|
La1.8.1
|
None
|
SRR13888750
|
Other
|
La2
|
None
|
SRR16156188
|
Sensitive
|
lineage4.9
|
None
|
SRR7645901
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4798769
|
Other
|
lineage1.1.3.3
|
None
|
ERR10796572
|
Other
|
lineage4.3.4.1;lineage4.9
|
None
|
SRR6153166
|
Other
|
lineage1.2.1.2.1
|
ca
|
ERR4811035
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.5
|
None
|
SRR7070479
|
Other
|
lineage4.1.2
|
None
|
SRR9970981
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR11342688
|
Other
|
lineage4.2.2.2
|
None
|
SRR11342653
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18003007
|
MDR-TB
|
lineage4.5
|
None
|
ERR4796351
|
Sensitive
|
lineage4.9
|
None
|
SRR18003047
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR978760
|
RR-TB
|
lineage4.8
|
None
|
ERR9896153
|
RR-TB
|
lineage4.4.1.1
|
None
|
SRR11342636
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR18003046
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10796617
|
Other
|
lineage4.3.4.1
|
None
|
SRR18002967
|
HR-TB
|
lineage2.2.1
|
None
|
SRR3675509
|
Other
|
lineage4.9
|
None
|
ERR10796596
|
Other
|
lineage4.9
|
None
|
ERR4814681
|
Other
|
lineage2.2.1
|
None
|
SRR3675447
|
Other
|
lineage3
|
None
|
SRR6046359
|
Other
|
lineage4.7
|
None
|
ERR867541
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR7070087
|
Other
|
lineage4.8.1
|
None
|
ERR9117788
|
Other
|
lineage3
|
None
|
SRR6046668
|
Sensitive
|
lineage1.1.2
|
gb
|
SRR7131145
|
Other
|
lineage4.1.2.1
|
None
|